BLASTX nr result

ID: Achyranthes23_contig00035525 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00035525
         (511 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...    70   3e-18
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga...    67   5e-14
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga...    61   1e-07
ref|XP_006492478.1| PREDICTED: putative ribonuclease H protein A...    42   3e-06

>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score = 70.5 bits (171), Expect(2) = 3e-18
 Identities = 26/53 (49%), Positives = 38/53 (71%)
 Frame = +3

Query: 3    WSLASTGDFNVKTTYMLGKSFALENPHRVWQVIWEMDANPKCRHFLWRICTGT 161
            W+ +  G ++VKT YMLGK   L++ HRVW ++W ++ +PK RHFLWR CT +
Sbjct: 1010 WAYSKDGTYSVKTAYMLGKGGNLDDFHRVWNILWSLNVSPKVRHFLWRACTSS 1062



 Score = 46.6 bits (109), Expect(2) = 3e-18
 Identities = 24/116 (20%), Positives = 56/116 (48%)
 Frame = +1

Query: 148  YVLEQEICPLCESSTKTIEHALFSYECVCEVWEATNNIISVEMSSDESVLE*VFK*NKLE 327
            +++++  CP C    +T  H  +      ++WE   + I +    DE++ + + + ++++
Sbjct: 1073 HLIDEAGCPCCAREDETQFHLFYRCPMSLKLWEELGSYILLPGIEDEAMCDTLVRWSQMD 1132

Query: 328  SRKTQLLANLAHKRWYMRNKKVHEEIIIPNSVILEQAKNMVNE*ATYMHIIYGGVK 495
            ++  Q    +    W  RN++V E    P +V+ ++    V +   Y   IYGG++
Sbjct: 1133 AKVVQKGCYILWNVWVERNRRVFEHTSQPATVVGQRIMRQVEDFNNYAVKIYGGMR 1188


>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 66.6 bits (161), Expect(2) = 5e-14
 Identities = 25/51 (49%), Positives = 34/51 (66%)
 Frame = +3

Query: 3    WSLASTGDFNVKTTYMLGKSFALENPHRVWQVIWEMDANPKCRHFLWRICT 155
            W+      ++VKT YM+GK   L+N H+ W  IW +D +PK RHFLWR+CT
Sbjct: 1007 WAFTKDATYSVKTAYMIGKGGNLDNFHQAWVDIWSLDVSPKVRHFLWRLCT 1057



 Score = 36.2 bits (82), Expect(2) = 5e-14
 Identities = 26/114 (22%), Positives = 52/114 (45%), Gaps = 2/114 (1%)
 Frame = +1

Query: 148  YVLEQEICPLCESSTKTIEHALFSYECVCEVW--EATNNIISVEMSSDESVLE*VFK*NK 321
            ++ + ++CP      +T  HA+F    + ++W      N+ S + S   S+ + +     
Sbjct: 1070 HLTDDDLCPWGCGEIETQRHAIFDCPKMRDLWLDSGCQNLCSRDASM--SMCDLLVSWRS 1127

Query: 322  LESRKTQLLANLAHKRWYMRNKKVHEEIIIPNSVILEQAKNMVNE*ATYMHIIY 483
            L+ +     A LA   W  RN K+      P+SV++++   +V E  ++   IY
Sbjct: 1128 LDGKLRIKGAYLAWCIWGERNAKIFNNKTTPSSVLMQRVSRLVEENGSHARRIY 1181


>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 24/53 (45%), Positives = 34/53 (64%)
 Frame = +3

Query: 3    WSLASTGDFNVKTTYMLGKSFALENPHRVWQVIWEMDANPKCRHFLWRICTGT 161
            W+      ++VKT YMLGK   L++ H+ W  IW M+ +PK +HFLWR+ T T
Sbjct: 1007 WAFTKNAHYSVKTAYMLGKGGNLDSFHQAWIDIWSMEVSPKVKHFLWRLGTNT 1059


>ref|XP_006492478.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
           X1 [Citrus sinensis] gi|568879016|ref|XP_006492479.1|
           PREDICTED: putative ribonuclease H protein
           At1g65750-like isoform X2 [Citrus sinensis]
          Length = 320

 Score = 41.6 bits (96), Expect(2) = 3e-06
 Identities = 24/86 (27%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
 Frame = +1

Query: 151 VLEQEICPLCESSTKTIEHALFSYECVCEVWEATNNIISVEMSSDE---SVLE*VFK*NK 321
           V+++ IC +C+   + I HAL  Y+   ++W  T+    V+  + +   S+L+ + K  K
Sbjct: 87  VVQEPICQICKKELENISHALLDYKLAKKMWRHTHIAAEVQNEAIQDFLSMLQSLTK--K 144

Query: 322 LESRKTQLLANLAHKRWYMRNKKVHE 399
           L +R+ +L + +    W  RNK ++E
Sbjct: 145 LTTREIELASFVWWGVWNARNKVIYE 170



 Score = 35.0 bits (79), Expect(2) = 3e-06
 Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 9/68 (13%)
 Frame = +3

Query: 3   WSLASTGDFNVKTTYMLGKSFALENPHRV---------WQVIWEMDANPKCRHFLWRICT 155
           W     G+++VK+ Y L  +F ++ P++          WQ IW++    K + FLWR  T
Sbjct: 16  WHYDKKGNYSVKSGYQL--AFTIKFPNKPCYSNSDFQGWQTIWKLGNPEKVKIFLWR--T 71

Query: 156 GTRDMPTM 179
               +PTM
Sbjct: 72  TKNLLPTM 79


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