BLASTX nr result

ID: Achyranthes23_contig00035361 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00035361
         (307 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318543.2| delta-adaptin family protein [Populus tricho...    59   9e-07
ref|XP_006442618.1| hypothetical protein CICLE_v10018705mg [Citr...    56   6e-06

>ref|XP_002318543.2| delta-adaptin family protein [Populus trichocarpa]
           gi|550326419|gb|EEE96763.2| delta-adaptin family protein
           [Populus trichocarpa]
          Length = 941

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 10/105 (9%)
 Frame = +3

Query: 3   ESCELSTHRQASESLVRDPDRSFSDNGNNDTLQDQC----------TLPMSEKETSIKDP 152
           E  E S    A   + RD D  F+   +N + +D            T  + E+++   + 
Sbjct: 515 ECSESSDLASAKAPVERDQDEGFNPRNSNQSYEDPSVVNGGHGQLSTSALMEEKSFTHES 574

Query: 153 VFELLNLTEKALEPLSRSHEVEIQERARNVLGAVHLVKLYFLSCS 287
           +F+LLNL E A+ PL  S++VEI+ERARN LG + LVK   L+ S
Sbjct: 575 IFKLLNLMELAMCPLLGSYDVEIEERARNALGFIELVKRDILNPS 619


>ref|XP_006442618.1| hypothetical protein CICLE_v10018705mg [Citrus clementina]
           gi|557544880|gb|ESR55858.1| hypothetical protein
           CICLE_v10018705mg [Citrus clementina]
          Length = 978

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 6/83 (7%)
 Frame = +3

Query: 51  RDPDRSFSD----NGNNDTLQDQ--CTLPMSEKETSIKDPVFELLNLTEKALEPLSRSHE 212
           R+ ++SF D    NG + T+ +    T     + +  ++ +  L N+ E AL PLSRSH+
Sbjct: 575 RNINQSFGDLSIENGGDATVSNSQASTSASLGRNSFTQESIVNLFNIVELALGPLSRSHD 634

Query: 213 VEIQERARNVLGAVHLVKLYFLS 281
           VEIQERARNVLG   L+K   L+
Sbjct: 635 VEIQERARNVLGFTDLIKQEILN 657


Top