BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00035282
         (385 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB42622.1| putative polyprotein (aspartic proteinase, rever...   201   1e-49
emb|CAC88781.1| putative polyprotein [Nicotiana tabacum]              201   1e-49
ref|YP_004300274.1| replicase [Sweet potato vein clearing virus]...   197   9e-49
ref|NP_569141.1| polyprotein [Tobacco vein clearing virus] gi|64...   197   1e-48
emb|CAC88807.1| putative polyprotein [Nicotiana tabacum]              197   2e-48
emb|CAC88785.1| putative polyprotein [Nicotiana tabacum]              196   2e-48
ref|XP_004247251.1| PREDICTED: putative enzymatic polyprotein-li...   173   2e-41
gb|ADZ45041.1| reverse transcriptase [Sweet potato caulimo-like ...   146   2e-33
gb|ADZ45040.1| reverse transcriptase [Sweet potato caulimo-like ...   146   2e-33
gb|ADZ45039.1| reverse transcriptase [Sweet potato caulimo-like ...   146   2e-33
ref|NP_056848.1| aspartic protease/reverse transcriptase [Cassav...   146   3e-33
ref|YP_004347415.1| replicase [Sweet potato caulimo-like virus] ...   145   4e-33
gb|ADZ45046.1| reverse transcriptase [Sweet potato caulimo-like ...   145   4e-33
gb|ADZ45045.1| reverse transcriptase [Sweet potato caulimo-like ...   145   4e-33
gb|ADZ45044.1| reverse transcriptase [Sweet potato caulimo-like ...   145   4e-33
gb|ADZ45043.1| reverse transcriptase [Sweet potato caulimo-like ...   145   4e-33
gb|ADZ45038.1| reverse transcriptase [Sweet potato caulimo-like ...   145   5e-33
emb|CAC88792.1| putative polyprotein [Nicotiana tabacum]              140   1e-31
gb|ABA99372.1| retrotransposon protein, putative, Ty3-gypsy subc...   133   2e-29
gb|ABA96037.1| retrotransposon protein, putative, Ty3-gypsy subc...   133   2e-29

>emb|CAB42622.1| putative polyprotein (aspartic proteinase, reverse transcriptase,
           ribonuclease H) [Nicotiana tabacum]
          Length = 636

 Score =  201 bits (510), Expect = 1e-49
 Identities = 96/127 (75%), Positives = 106/127 (83%)
 Frame = +3

Query: 3   QKPFNNTDKDMIEFKMHITELSNAGLIRKSNSKHCSSAFIVMKHSEQKRNKSRMVIDYRN 182
           QKP      D+ EFKMHI EL +   I++SNSKH S AFIV KHSEQKR KSRMVIDYRN
Sbjct: 208 QKPLKYNFNDLTEFKMHIKELLDNNYIQESNSKHTSPAFIVNKHSEQKRGKSRMVIDYRN 267

Query: 183 LNAKTKTFNYPLPNKILLIKQIQGYKWFSKFDCKSGFHHLKLTEESKALTAFTVPNGFYE 362
           LNAKTKT+NYP+PNKIL I+QIQGY +FSKFDCKSGF+HLKL +ESK LTAFTVP GFYE
Sbjct: 268 LNAKTKTYNYPIPNKILKIRQIQGYNYFSKFDCKSGFYHLKLEDESKKLTAFTVPQGFYE 327

Query: 363 WNVLPFG 383
           WNVLPFG
Sbjct: 328 WNVLPFG 334


>emb|CAC88781.1| putative polyprotein [Nicotiana tabacum]
          Length = 475

 Score =  201 bits (510), Expect = 1e-49
 Identities = 96/127 (75%), Positives = 106/127 (83%)
 Frame = +3

Query: 3   QKPFNNTDKDMIEFKMHITELSNAGLIRKSNSKHCSSAFIVMKHSEQKRNKSRMVIDYRN 182
           QKP      D+ EFKMHI EL +   I++SNSKH S AFIV KHSEQKR KSRMVIDYRN
Sbjct: 208 QKPLKYNFNDLTEFKMHIKELLDNNYIQESNSKHTSPAFIVNKHSEQKRGKSRMVIDYRN 267

Query: 183 LNAKTKTFNYPLPNKILLIKQIQGYKWFSKFDCKSGFHHLKLTEESKALTAFTVPNGFYE 362
           LNAKTKT+NYP+PNKIL I+QIQGY +FSKFDCKSGF+HLKL +ESK LTAFTVP GFYE
Sbjct: 268 LNAKTKTYNYPIPNKILKIRQIQGYNYFSKFDCKSGFYHLKLEDESKKLTAFTVPQGFYE 327

Query: 363 WNVLPFG 383
           WNVLPFG
Sbjct: 328 WNVLPFG 334


>ref|YP_004300274.1| replicase [Sweet potato vein clearing virus]
           gi|325698381|gb|ADZ45064.1| replicase [Sweet potato vein
           clearing virus]
          Length = 619

 Score =  197 bits (502), Expect = 9e-49
 Identities = 95/127 (74%), Positives = 105/127 (82%)
 Frame = +3

Query: 3   QKPFNNTDKDMIEFKMHITELSNAGLIRKSNSKHCSSAFIVMKHSEQKRNKSRMVIDYRN 182
           QKP     +D+ EFK+HI EL   G IR SNSKH S AFIV KHSEQKR KSRMVIDYRN
Sbjct: 193 QKPLRWNFEDIEEFKLHIDELLKGGFIRPSNSKHSSPAFIVNKHSEQKRGKSRMVIDYRN 252

Query: 183 LNAKTKTFNYPLPNKILLIKQIQGYKWFSKFDCKSGFHHLKLTEESKALTAFTVPNGFYE 362
           LNAKTKT+NYPLPNKIL ++Q+QGY WFSKFDCKSGF+HLKLTEESK L+AF VP GFYE
Sbjct: 253 LNAKTKTYNYPLPNKILRVRQVQGYNWFSKFDCKSGFYHLKLTEESKHLSAFNVPQGFYE 312

Query: 363 WNVLPFG 383
           +NVL FG
Sbjct: 313 FNVLMFG 319


>ref|NP_569141.1| polyprotein [Tobacco vein clearing virus]
           gi|6425075|gb|AAF08289.1|AF190123_3 polyprotein [Tobacco
           vein clearing virus]
          Length = 635

 Score =  197 bits (501), Expect = 1e-48
 Identities = 94/127 (74%), Positives = 106/127 (83%)
 Frame = +3

Query: 3   QKPFNNTDKDMIEFKMHITELSNAGLIRKSNSKHCSSAFIVMKHSEQKRNKSRMVIDYRN 182
           QKP      D+ EFK+HI +L +   I++SNSKH S AFIV KHSEQKR KSRMVIDYRN
Sbjct: 208 QKPLKYNFNDLTEFKIHIKDLLDNKYIQESNSKHTSPAFIVNKHSEQKRGKSRMVIDYRN 267

Query: 183 LNAKTKTFNYPLPNKILLIKQIQGYKWFSKFDCKSGFHHLKLTEESKALTAFTVPNGFYE 362
           LNAKTKT+NYP+PNKIL I+QIQGY +FSKFDCKSGF+HLKL +ESK LTAFTVP GFYE
Sbjct: 268 LNAKTKTYNYPIPNKILKIRQIQGYNYFSKFDCKSGFYHLKLEDESKKLTAFTVPQGFYE 327

Query: 363 WNVLPFG 383
           WNVLPFG
Sbjct: 328 WNVLPFG 334


>emb|CAC88807.1| putative polyprotein [Nicotiana tabacum]
          Length = 266

 Score =  197 bits (500), Expect = 2e-48
 Identities = 95/127 (74%), Positives = 105/127 (82%)
 Frame = +3

Query: 3   QKPFNNTDKDMIEFKMHITELSNAGLIRKSNSKHCSSAFIVMKHSEQKRNKSRMVIDYRN 182
           QKP      D+IEFKMHI EL +   I++SNSKH S  FIV KHSEQKR KSRMVI YRN
Sbjct: 122 QKPLKYNFNDLIEFKMHIKELLDNKYIQESNSKHTSPTFIVNKHSEQKRGKSRMVIYYRN 181

Query: 183 LNAKTKTFNYPLPNKILLIKQIQGYKWFSKFDCKSGFHHLKLTEESKALTAFTVPNGFYE 362
           LNAKTKT+NYP+PNKIL I+QIQGY +FSKFDCKSGF+HLKL +ESK LTAFTVP GFYE
Sbjct: 182 LNAKTKTYNYPIPNKILKIRQIQGYNYFSKFDCKSGFYHLKLEDESKKLTAFTVPQGFYE 241

Query: 363 WNVLPFG 383
           WNVLPFG
Sbjct: 242 WNVLPFG 248


>emb|CAC88785.1| putative polyprotein [Nicotiana tabacum]
          Length = 517

 Score =  196 bits (499), Expect = 2e-48
 Identities = 95/127 (74%), Positives = 105/127 (82%)
 Frame = +3

Query: 3   QKPFNNTDKDMIEFKMHITELSNAGLIRKSNSKHCSSAFIVMKHSEQKRNKSRMVIDYRN 182
           QKP      D+ EFKMHI EL +   I++SNSKH S AFIV KHSEQKR KSRMVIDYRN
Sbjct: 208 QKPLKYNFNDLTEFKMHIKELLDNNYIQESNSKHTSPAFIVNKHSEQKRGKSRMVIDYRN 267

Query: 183 LNAKTKTFNYPLPNKILLIKQIQGYKWFSKFDCKSGFHHLKLTEESKALTAFTVPNGFYE 362
           LNAKTKT+NYP+PNKIL I+QIQGY +FSKFD KSGF+HLKL +ESK LTAFTVP GFYE
Sbjct: 268 LNAKTKTYNYPIPNKILKIRQIQGYNYFSKFDYKSGFYHLKLEDESKKLTAFTVPQGFYE 327

Query: 363 WNVLPFG 383
           WNVLPFG
Sbjct: 328 WNVLPFG 334


>ref|XP_004247251.1| PREDICTED: putative enzymatic polyprotein-like [Solanum
           lycopersicum]
          Length = 428

 Score =  173 bits (438), Expect = 2e-41
 Identities = 80/95 (84%), Positives = 87/95 (91%)
 Frame = +3

Query: 99  KHCSSAFIVMKHSEQKRNKSRMVIDYRNLNAKTKTFNYPLPNKILLIKQIQGYKWFSKFD 278
           KH S AFIV+KHSEQKR KSRMVIDYRNLNAKTKT+NYP+PNKIL I+QIQGY +FSKFD
Sbjct: 33  KHTSPAFIVIKHSEQKRGKSRMVIDYRNLNAKTKTYNYPIPNKILKIRQIQGYNYFSKFD 92

Query: 279 CKSGFHHLKLTEESKALTAFTVPNGFYEWNVLPFG 383
           CKSGF+H+KL EESK LTAFTVP GFYEWNVLPFG
Sbjct: 93  CKSGFYHIKLEEESKQLTAFTVPQGFYEWNVLPFG 127


>gb|ADZ45041.1| reverse transcriptase [Sweet potato caulimo-like virus]
          Length = 291

 Score =  146 bits (369), Expect = 2e-33
 Identities = 74/129 (57%), Positives = 88/129 (68%), Gaps = 4/129 (3%)
 Frame = +3

Query: 9   PFNNTDKDMIEFKMHITELSNAGLIRK----SNSKHCSSAFIVMKHSEQKRNKSRMVIDY 176
           P N  + D  EFKMHI E+   G I +     N K+ S AFIV KHSE KR KSRMVIDY
Sbjct: 54  PINYQESDYKEFKMHIDEMVKEGFIEECKNLENKKYSSPAFIVNKHSEIKRGKSRMVIDY 113

Query: 177 RNLNAKTKTFNYPLPNKILLIKQIQGYKWFSKFDCKSGFHHLKLTEESKALTAFTVPNGF 356
           ++LN K K   +P+PNK +LI +     +FSKFDCKSGF+H+KL EESK  TAFTVP G+
Sbjct: 114 KDLNKKAKIIKHPIPNKDILINRGIKANYFSKFDCKSGFYHIKLEEESKKYTAFTVPQGY 173

Query: 357 YEWNVLPFG 383
           Y W VLPFG
Sbjct: 174 YVWIVLPFG 182


>gb|ADZ45040.1| reverse transcriptase [Sweet potato caulimo-like virus]
          Length = 291

 Score =  146 bits (369), Expect = 2e-33
 Identities = 74/129 (57%), Positives = 88/129 (68%), Gaps = 4/129 (3%)
 Frame = +3

Query: 9   PFNNTDKDMIEFKMHITELSNAGLIRK----SNSKHCSSAFIVMKHSEQKRNKSRMVIDY 176
           P N  + D  EFKMHI E+   G I +     N K+ S AFIV KHSE KR KSRMVIDY
Sbjct: 54  PINYQESDYKEFKMHIDEMVKEGFIEECKNLENKKYSSPAFIVNKHSEIKRGKSRMVIDY 113

Query: 177 RNLNAKTKTFNYPLPNKILLIKQIQGYKWFSKFDCKSGFHHLKLTEESKALTAFTVPNGF 356
           ++LN K K   +P+PNK +LI +     +FSKFDCKSGF+H+KL EESK  TAFTVP G+
Sbjct: 114 KDLNKKAKIIKHPIPNKDILINRGIKANYFSKFDCKSGFYHIKLEEESKKYTAFTVPQGY 173

Query: 357 YEWNVLPFG 383
           Y W VLPFG
Sbjct: 174 YVWIVLPFG 182


>gb|ADZ45039.1| reverse transcriptase [Sweet potato caulimo-like virus]
          Length = 291

 Score =  146 bits (369), Expect = 2e-33
 Identities = 74/129 (57%), Positives = 88/129 (68%), Gaps = 4/129 (3%)
 Frame = +3

Query: 9   PFNNTDKDMIEFKMHITELSNAGLIRK----SNSKHCSSAFIVMKHSEQKRNKSRMVIDY 176
           P N  + D  EFKMHI E+   G I +     N K+ S AFIV KHSE KR KSRMVIDY
Sbjct: 54  PINYQESDYKEFKMHIDEMVKEGFIEECKNLENKKYSSPAFIVNKHSEIKRGKSRMVIDY 113

Query: 177 RNLNAKTKTFNYPLPNKILLIKQIQGYKWFSKFDCKSGFHHLKLTEESKALTAFTVPNGF 356
           ++LN K K   +P+PNK +LI +     +FSKFDCKSGF+H+KL EESK  TAFTVP G+
Sbjct: 114 KDLNKKAKIIKHPIPNKDILINRGIKANYFSKFDCKSGFYHIKLEEESKKYTAFTVPQGY 173

Query: 357 YEWNVLPFG 383
           Y W VLPFG
Sbjct: 174 YVWIVLPFG 182


>ref|NP_056848.1| aspartic protease/reverse transcriptase [Cassava vein mosaic virus]
           gi|81945490|sp|Q89703.1|POL_CSVMV RecName: Full=Putative
           enzymatic polyprotein; Includes: RecName: Full=Protease;
           Short=PR; Includes: RecName: Full=Reverse transcriptase;
           Short=RT; Includes: RecName: Full=Ribonuclease H
           gi|665934|gb|AAA79873.1| ORF III [Cassava vein mosaic
           virus] gi|1399884|gb|AAB03327.1| ORF 3 [Cassava vein
           mosaic virus]
          Length = 652

 Score =  146 bits (368), Expect = 3e-33
 Identities = 71/129 (55%), Positives = 90/129 (69%), Gaps = 4/129 (3%)
 Frame = +3

Query: 9   PFNNTDKDMIEFKMHITELSNAGLIRKSNS----KHCSSAFIVMKHSEQKRNKSRMVIDY 176
           P    + D+ EFKMHI E+   G I +  +    K+ S AFIV KHSEQKR K+RMVIDY
Sbjct: 208 PMLYQETDLPEFKMHIEEMIKEGFIEEKTNFEDKKYSSPAFIVNKHSEQKRGKTRMVIDY 267

Query: 177 RNLNAKTKTFNYPLPNKILLIKQIQGYKWFSKFDCKSGFHHLKLTEESKALTAFTVPNGF 356
           ++LN K K   YP+PNK  LI +    +++SKFDCKSGF+H+KL E+SK  TAFTVP G+
Sbjct: 268 KDLNKKAKVVKYPIPNKDTLIHRSIQARYYSKFDCKSGFYHIKLEEDSKKYTAFTVPQGY 327

Query: 357 YEWNVLPFG 383
           Y+W VLPFG
Sbjct: 328 YQWKVLPFG 336


>ref|YP_004347415.1| replicase [Sweet potato caulimo-like virus]
           gi|327415369|gb|ADR03142.2| replicase [Sweet potato
           caulimo-like virus]
          Length = 641

 Score =  145 bits (367), Expect = 4e-33
 Identities = 73/129 (56%), Positives = 88/129 (68%), Gaps = 4/129 (3%)
 Frame = +3

Query: 9   PFNNTDKDMIEFKMHITELSNAGLIRK----SNSKHCSSAFIVMKHSEQKRNKSRMVIDY 176
           P N  + D  EFKMHI E+   G I +     N K+ S AFIV KHSE KR KSRMVIDY
Sbjct: 204 PINYQESDYKEFKMHIDEMVKEGFIEECKNLENKKYSSPAFIVNKHSEIKRGKSRMVIDY 263

Query: 177 RNLNAKTKTFNYPLPNKILLIKQIQGYKWFSKFDCKSGFHHLKLTEESKALTAFTVPNGF 356
           ++LN K K   +P+PNK +LI +     +FSKFDCKSGF+H+KL E+SK  TAFTVP G+
Sbjct: 264 KDLNKKAKVIKHPIPNKDILINRGIKANYFSKFDCKSGFYHIKLEEDSKKYTAFTVPQGY 323

Query: 357 YEWNVLPFG 383
           Y W VLPFG
Sbjct: 324 YVWIVLPFG 332


>gb|ADZ45046.1| reverse transcriptase [Sweet potato caulimo-like virus]
          Length = 276

 Score =  145 bits (367), Expect = 4e-33
 Identities = 73/129 (56%), Positives = 88/129 (68%), Gaps = 4/129 (3%)
 Frame = +3

Query: 9   PFNNTDKDMIEFKMHITELSNAGLIRK----SNSKHCSSAFIVMKHSEQKRNKSRMVIDY 176
           P N  + D  EFKMHI E+   G I +     N K+ S AFIV KHSE KR KSRMVIDY
Sbjct: 51  PINYQESDYKEFKMHIDEMVKEGFIEECKNLENKKYSSPAFIVNKHSEIKRGKSRMVIDY 110

Query: 177 RNLNAKTKTFNYPLPNKILLIKQIQGYKWFSKFDCKSGFHHLKLTEESKALTAFTVPNGF 356
           ++LN K K   +P+PNK +LI +     +FSKFDCKSGF+H+KL E+SK  TAFTVP G+
Sbjct: 111 KDLNKKAKVIKHPIPNKDILINRGIKANYFSKFDCKSGFYHIKLEEDSKKYTAFTVPQGY 170

Query: 357 YEWNVLPFG 383
           Y W VLPFG
Sbjct: 171 YVWIVLPFG 179


>gb|ADZ45045.1| reverse transcriptase [Sweet potato caulimo-like virus]
          Length = 291

 Score =  145 bits (367), Expect = 4e-33
 Identities = 73/129 (56%), Positives = 88/129 (68%), Gaps = 4/129 (3%)
 Frame = +3

Query: 9   PFNNTDKDMIEFKMHITELSNAGLIRK----SNSKHCSSAFIVMKHSEQKRNKSRMVIDY 176
           P N  + D  EFKMHI E+   G I +     N K+ S AFIV KHSE KR KSRMVIDY
Sbjct: 54  PINYQESDYKEFKMHIDEMVKEGFIEECKNLENKKYSSPAFIVNKHSEIKRGKSRMVIDY 113

Query: 177 RNLNAKTKTFNYPLPNKILLIKQIQGYKWFSKFDCKSGFHHLKLTEESKALTAFTVPNGF 356
           ++LN K K   +P+PNK +LI +     +FSKFDCKSGF+H+KL E+SK  TAFTVP G+
Sbjct: 114 KDLNKKAKVIKHPIPNKDILINRGIKANYFSKFDCKSGFYHIKLEEDSKKYTAFTVPQGY 173

Query: 357 YEWNVLPFG 383
           Y W VLPFG
Sbjct: 174 YVWIVLPFG 182


>gb|ADZ45044.1| reverse transcriptase [Sweet potato caulimo-like virus]
          Length = 291

 Score =  145 bits (367), Expect = 4e-33
 Identities = 73/129 (56%), Positives = 88/129 (68%), Gaps = 4/129 (3%)
 Frame = +3

Query: 9   PFNNTDKDMIEFKMHITELSNAGLIRK----SNSKHCSSAFIVMKHSEQKRNKSRMVIDY 176
           P N  + D  EFKMHI E+   G I +     N K+ S AFIV KHSE KR KSRMVIDY
Sbjct: 54  PINYQESDYKEFKMHIDEMVKEGFIEECKNLENKKYSSPAFIVNKHSEIKRGKSRMVIDY 113

Query: 177 RNLNAKTKTFNYPLPNKILLIKQIQGYKWFSKFDCKSGFHHLKLTEESKALTAFTVPNGF 356
           ++LN K K   +P+PNK +LI +     +FSKFDCKSGF+H+KL E+SK  TAFTVP G+
Sbjct: 114 KDLNKKAKVIKHPIPNKDILINRGIKANYFSKFDCKSGFYHIKLEEDSKKYTAFTVPQGY 173

Query: 357 YEWNVLPFG 383
           Y W VLPFG
Sbjct: 174 YVWIVLPFG 182


>gb|ADZ45043.1| reverse transcriptase [Sweet potato caulimo-like virus]
          Length = 291

 Score =  145 bits (367), Expect = 4e-33
 Identities = 73/129 (56%), Positives = 88/129 (68%), Gaps = 4/129 (3%)
 Frame = +3

Query: 9   PFNNTDKDMIEFKMHITELSNAGLIRK----SNSKHCSSAFIVMKHSEQKRNKSRMVIDY 176
           P N  + D  EFKMHI E+   G I +     N K+ S AFIV KHSE KR KSRMVIDY
Sbjct: 54  PINYQESDYKEFKMHIDEMVKEGFIEECKNLENKKYSSPAFIVNKHSEIKRGKSRMVIDY 113

Query: 177 RNLNAKTKTFNYPLPNKILLIKQIQGYKWFSKFDCKSGFHHLKLTEESKALTAFTVPNGF 356
           ++LN K K   +P+PNK +LI +     +FSKFDCKSGF+H+KL E+SK  TAFTVP G+
Sbjct: 114 KDLNKKAKVIKHPIPNKDILINRGIKANYFSKFDCKSGFYHIKLEEDSKKYTAFTVPQGY 173

Query: 357 YEWNVLPFG 383
           Y W VLPFG
Sbjct: 174 YVWIVLPFG 182


>gb|ADZ45038.1| reverse transcriptase [Sweet potato caulimo-like virus]
           gi|325698343|gb|ADZ45042.1| reverse transcriptase [Sweet
           potato caulimo-like virus]
          Length = 291

 Score =  145 bits (366), Expect = 5e-33
 Identities = 73/129 (56%), Positives = 88/129 (68%), Gaps = 4/129 (3%)
 Frame = +3

Query: 9   PFNNTDKDMIEFKMHITELSNAGLIRK----SNSKHCSSAFIVMKHSEQKRNKSRMVIDY 176
           P N  + D  EFKMHI E+   G I +     N K+ S AFIV KHSE KR KSRMVIDY
Sbjct: 54  PINYQESDYKEFKMHIDEMVKEGFIEECKNLENKKYSSPAFIVNKHSEIKRGKSRMVIDY 113

Query: 177 RNLNAKTKTFNYPLPNKILLIKQIQGYKWFSKFDCKSGFHHLKLTEESKALTAFTVPNGF 356
           ++LN K K   +P+PNK +LI +     +FSKFDCKSGF+H+KL E+SK  TAFTVP G+
Sbjct: 114 KDLNKKAKIIKHPIPNKDILINRGIKANYFSKFDCKSGFYHIKLEEDSKKYTAFTVPQGY 173

Query: 357 YEWNVLPFG 383
           Y W VLPFG
Sbjct: 174 YVWIVLPFG 182


>emb|CAC88792.1| putative polyprotein [Nicotiana tabacum]
          Length = 302

 Score =  140 bits (354), Expect = 1e-31
 Identities = 68/95 (71%), Positives = 76/95 (80%)
 Frame = +3

Query: 3   QKPFNNTDKDMIEFKMHITELSNAGLIRKSNSKHCSSAFIVMKHSEQKRNKSRMVIDYRN 182
           QKP      D+ EFKMHI EL +   I++SNSKH S  FIV KHSEQKR KSRMVIDYRN
Sbjct: 208 QKPLKYNFNDLTEFKMHIKELLDNNYIQESNSKHTSPTFIVNKHSEQKRGKSRMVIDYRN 267

Query: 183 LNAKTKTFNYPLPNKILLIKQIQGYKWFSKFDCKS 287
           LNAKTKT+NYP+PNKIL I+QIQGY +FSKFDCKS
Sbjct: 268 LNAKTKTYNYPIPNKILKIRQIQGYNYFSKFDCKS 302


>gb|ABA99372.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 1098

 Score =  133 bits (335), Expect = 2e-29
 Identities = 69/125 (55%), Positives = 83/125 (66%)
 Frame = +3

Query: 9   PFNNTDKDMIEFKMHITELSNAGLIRKSNSKHCSSAFIVMKHSEQKRNKSRMVIDYRNLN 188
           P   T KD+ EFKMHI EL   G IR+S S H S+AFIV  H+E+ R KSRMVI+Y+ LN
Sbjct: 519 PIEATPKDIEEFKMHIEELLKLGAIRESRSPHRSAAFIVRNHAEEVRGKSRMVINYKRLN 578

Query: 189 AKTKTFNYPLPNKILLIKQIQGYKWFSKFDCKSGFHHLKLTEESKALTAFTVPNGFYEWN 368
             T    Y +PNK   I +IQG K+FSKFD K+GF  +K+ EES   TAFT P G YEW 
Sbjct: 579 DNTIEDAYNIPNKQEWINRIQGSKYFSKFDLKTGFWQVKMAEESIEWTAFTCPQGHYEWL 638

Query: 369 VLPFG 383
           V+P G
Sbjct: 639 VMPLG 643


>gb|ABA96037.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 792

 Score =  133 bits (335), Expect = 2e-29
 Identities = 69/125 (55%), Positives = 83/125 (66%)
 Frame = +3

Query: 9   PFNNTDKDMIEFKMHITELSNAGLIRKSNSKHCSSAFIVMKHSEQKRNKSRMVIDYRNLN 188
           P   T KD+ EFKMHI EL   G IR+S S H S+AFIV  H+E+ R KSRMVI+Y+ LN
Sbjct: 185 PIEATPKDIEEFKMHIEELLKLGAIRESRSPHRSAAFIVRNHAEEVRGKSRMVINYKRLN 244

Query: 189 AKTKTFNYPLPNKILLIKQIQGYKWFSKFDCKSGFHHLKLTEESKALTAFTVPNGFYEWN 368
             T    Y +PNK   I +IQG K+FSKFD K+GF  +K+ EES   TAFT P G YEW 
Sbjct: 245 DNTIEDAYNIPNKQEWINRIQGSKYFSKFDLKAGFWQVKMAEESIEWTAFTCPQGHYEWL 304

Query: 369 VLPFG 383
           V+P G
Sbjct: 305 VMPLG 309