BLASTX nr result

ID: Achyranthes23_contig00035265 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00035265
         (235 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15765.3| unnamed protein product [Vitis vinifera]               79   8e-13
ref|XP_002280974.1| PREDICTED: pentatricopeptide repeat-containi...    74   2e-11
emb|CAN83162.1| hypothetical protein VITISV_022557 [Vitis vinifera]    74   3e-11
ref|XP_006366292.1| PREDICTED: pentatricopeptide repeat-containi...    65   9e-09
ref|XP_004241650.1| PREDICTED: pentatricopeptide repeat-containi...    64   2e-08
ref|XP_002511082.1| pentatricopeptide repeat-containing protein,...    59   9e-07
ref|XP_004155710.1| PREDICTED: pentatricopeptide repeat-containi...    56   6e-06

>emb|CBI15765.3| unnamed protein product [Vitis vinifera]
          Length = 375

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 34/77 (44%), Positives = 53/77 (68%)
 Frame = -1

Query: 232 SSAISPFPPTTTTDPQMLQCVLDDCKTSLESKTVLRTHAKIVKFGFGRDPILVSRLLLTY 53
           +++++  P +T  D Q L C+L+ CK S + +T  ++HAKI+KFG+G  P L++ L+ TY
Sbjct: 33  TNSLNSSPSSTIPDHQKLNCILEACKFSSDFRTAFQSHAKIIKFGYGTYPSLITSLVSTY 92

Query: 52  INCDSLDFARSLLDEIP 2
            +CD LD A  LLDE+P
Sbjct: 93  AHCDCLDLAHQLLDEMP 109


>ref|XP_002280974.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50990
           [Vitis vinifera]
          Length = 523

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 32/65 (49%), Positives = 46/65 (70%)
 Frame = -1

Query: 196 TDPQMLQCVLDDCKTSLESKTVLRTHAKIVKFGFGRDPILVSRLLLTYINCDSLDFARSL 17
           +D Q L C+L+ CK S + +T  ++HAKI+KFG+G  P L++ L+ TY +CD LD A  L
Sbjct: 18  SDHQKLNCILEACKFSSDFRTAFQSHAKIIKFGYGTYPSLITSLVSTYAHCDCLDLAHQL 77

Query: 16  LDEIP 2
           LDE+P
Sbjct: 78  LDEMP 82


>emb|CAN83162.1| hypothetical protein VITISV_022557 [Vitis vinifera]
          Length = 562

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 32/64 (50%), Positives = 45/64 (70%)
 Frame = -1

Query: 193 DPQMLQCVLDDCKTSLESKTVLRTHAKIVKFGFGRDPILVSRLLLTYINCDSLDFARSLL 14
           D Q L C+L+ CK S + +T  ++HAKI+KFG+G  P L++ L+ TY +CD LD A  LL
Sbjct: 58  DHQKLNCILEACKFSSDFRTAFQSHAKIIKFGYGTYPSLITSLVSTYAHCDCLDLAHQLL 117

Query: 13  DEIP 2
           DE+P
Sbjct: 118 DEMP 121


>ref|XP_006366292.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g50990-like [Solanum tuberosum]
          Length = 556

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 31/75 (41%), Positives = 45/75 (60%)
 Frame = -1

Query: 226 AISPFPPTTTTDPQMLQCVLDDCKTSLESKTVLRTHAKIVKFGFGRDPILVSRLLLTYIN 47
           ++SP     + D   L C+L+ CK S   +T    HA I+K G+G  P L+S +++TY +
Sbjct: 41  SLSPTESHYSQDYHRLLCILEACKVSPNLRTTAGAHANIIKLGYGMYPSLISLMVVTYAS 100

Query: 46  CDSLDFARSLLDEIP 2
           CD L+ AR LL EIP
Sbjct: 101 CDRLNLARQLLVEIP 115


>ref|XP_004241650.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g50990-like [Solanum lycopersicum]
          Length = 554

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 31/75 (41%), Positives = 45/75 (60%)
 Frame = -1

Query: 226 AISPFPPTTTTDPQMLQCVLDDCKTSLESKTVLRTHAKIVKFGFGRDPILVSRLLLTYIN 47
           ++SP     + D   L C+L+ CK S   +T    HA I+K G+G  P L+S +++TY +
Sbjct: 39  SLSPTESHYSQDYHRLLCILEACKMSPNLRTTAGAHANIIKLGYGVYPSLISLMVVTYAS 98

Query: 46  CDSLDFARSLLDEIP 2
           CD L+ AR LL EIP
Sbjct: 99  CDRLNLARQLLVEIP 113


>ref|XP_002511082.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550197|gb|EEF51684.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 274

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 24/64 (37%), Positives = 43/64 (67%)
 Frame = -1

Query: 196 TDPQMLQCVLDDCKTSLESKTVLRTHAKIVKFGFGRDPILVSRLLLTYINCDSLDFARSL 17
           +D Q+   +L+ CK SL+ KT + THA+I++FG+G  P L + L+ TY+ CD  + A  +
Sbjct: 8   SDYQLFIHLLEACKLSLDLKTAIETHARIIRFGYGTYPSLAASLVSTYVKCDHFNLACEV 67

Query: 16  LDEI 5
           ++++
Sbjct: 68  INQV 71


>ref|XP_004155710.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g50990-like [Cucumis sativus]
          Length = 376

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 29/70 (41%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
 Frame = -1

Query: 217 PFPPTTTTDPQMLQCVLDDCKT-SLESKTVLRTHAKIVKFGFGRDPILVSRLLLTYINCD 41
           P  P+ + D Q L  VL+ C+   + SKTV+ THA+I+KFG+G  P L++ L+ TY    
Sbjct: 25  PAAPSNSKDYQSLYRVLEACRLFHMNSKTVIETHARIIKFGYGNYPTLIASLVSTYQRVG 84

Query: 40  SLDFARSLLD 11
            L+    LLD
Sbjct: 85  CLNRVHQLLD 94


Top