BLASTX nr result
ID: Achyranthes23_contig00034629
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Achyranthes23_contig00034629
(1421 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAC80139.1| DNA-dependent RNA polymerase [Spinacia oleracea] 520 e-145
ref|XP_006474044.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 493 e-137
ref|XP_004287148.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 486 e-134
ref|XP_006453567.1| hypothetical protein CICLE_v10007333mg [Citr... 484 e-134
ref|XP_006453566.1| hypothetical protein CICLE_v10007333mg [Citr... 484 e-134
gb|EMJ04424.1| hypothetical protein PRUPE_ppa000868mg [Prunus pe... 483 e-133
gb|EOY31496.1| DNA/RNA polymerases superfamily protein isoform 1... 481 e-133
emb|CBI36559.3| unnamed protein product [Vitis vinifera] 480 e-133
ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 480 e-133
ref|XP_006343727.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 477 e-132
gb|EOY31497.1| DNA/RNA polymerases superfamily protein isoform 2... 476 e-132
ref|XP_004242994.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 476 e-132
sp|P69242.1|RPOT3_NICSY RecName: Full=DNA-directed RNA polymeras... 474 e-131
sp|Q8L6J1.2|RPO3B_TOBAC RecName: Full=DNA-directed RNA polymeras... 474 e-131
ref|XP_002325119.1| DNA-directed RNA polymerase family protein [... 470 e-130
ref|XP_006296121.1| hypothetical protein CARUB_v10025273mg [Caps... 465 e-128
ref|NP_179989.1| DNA-directed RNA polymerase 3 [Arabidopsis thal... 465 e-128
ref|XP_002880548.1| PDE319/SCA3 [Arabidopsis lyrata subsp. lyrat... 465 e-128
ref|XP_002308414.1| hypothetical protein POPTR_0006s19490g [Popu... 464 e-128
emb|CAC95026.1| plastid RNA polymerase [Nicotiana tabacum] 464 e-128
>emb|CAC80139.1| DNA-dependent RNA polymerase [Spinacia oleracea]
Length = 989
Score = 520 bits (1340), Expect = e-145
Identities = 252/281 (89%), Positives = 275/281 (97%)
Frame = +3
Query: 3 AAAVNLVAGEKPADVYSDIAARVREIMEEDSRKDPETNPNALLAKVLLDQVDRKLVKQTV 182
AAAVNLVAGE+PADVYS+IA RVREIME+DSRKDP+T+P+A+LAKVL+DQVDRKLVKQTV
Sbjct: 709 AAAVNLVAGEEPADVYSEIAVRVREIMEKDSRKDPKTDPHAVLAKVLVDQVDRKLVKQTV 768
Query: 183 MTSVYGVTFVGAREQIKRRLEEKDLITDDRLLFTAACYSAKVTMSALGQLFQAARSIMDW 362
MTSVYGVTFVGAREQIKRRLEEK +ITDDRLLF+AACYSAKVTMSALGQLFQAAR IMDW
Sbjct: 769 MTSVYGVTFVGAREQIKRRLEEKGVITDDRLLFSAACYSAKVTMSALGQLFQAARGIMDW 828
Query: 363 LGDCAKVVAAENEPVRWTTPLGLPVIQPYCKNKRHLIKTSLQVLALQKEGDGIEVKKQRT 542
LGDCAKV+A+EN+PVRWTTPLGLPV+QPYCK+KRHLIKTSLQVLALQ+EG+GIEVKKQRT
Sbjct: 829 LGDCAKVIASENQPVRWTTPLGLPVVQPYCKSKRHLIKTSLQVLALQQEGEGIEVKKQRT 888
Query: 543 AFPPNYVHSLDGTHMMMTAVACREAGLQFAGVHDSFWTHACDIEQMNQILREKFVELYNM 722
AFPPNYVHSLDGTHMMMTAVACR+AGLQFAGVHDSFWTHACD+E+MNQILR KFVELYNM
Sbjct: 889 AFPPNYVHSLDGTHMMMTAVACRDAGLQFAGVHDSFWTHACDVEKMNQILRVKFVELYNM 948
Query: 723 PILENLLESFQASYPTSTFPPLPERGNFNLEEVLESPYFFN 845
PILENLLESFQ +YP STFPPLPERG+F+LEEVLESPYFFN
Sbjct: 949 PILENLLESFQTAYPASTFPPLPERGDFDLEEVLESPYFFN 989
>ref|XP_006474044.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Citrus
sinensis]
Length = 1009
Score = 493 bits (1269), Expect = e-137
Identities = 234/281 (83%), Positives = 264/281 (93%)
Frame = +3
Query: 3 AAAVNLVAGEKPADVYSDIAARVREIMEEDSRKDPETNPNALLAKVLLDQVDRKLVKQTV 182
AAAVNLVAGEKPADVYS+IA RV EIM+ DS KDP +P ALLAK+L+DQVDRKLVKQTV
Sbjct: 729 AAAVNLVAGEKPADVYSEIAVRVHEIMKRDSNKDPSKHPQALLAKILIDQVDRKLVKQTV 788
Query: 183 MTSVYGVTFVGAREQIKRRLEEKDLITDDRLLFTAACYSAKVTMSALGQLFQAARSIMDW 362
MTSVYGVTFVGAREQIKRRLEEK ITDDR LF AACY+AKVT++ALG++F+AARSIM W
Sbjct: 789 MTSVYGVTFVGAREQIKRRLEEKGHITDDRQLFAAACYAAKVTLTALGEIFEAARSIMGW 848
Query: 363 LGDCAKVVAAENEPVRWTTPLGLPVIQPYCKNKRHLIKTSLQVLALQKEGDGIEVKKQRT 542
LGDCAKV+A+EN+PVRWTTPLGLPV+QPYCKN+RHLI+TSLQVLALQ+EG +E++KQRT
Sbjct: 849 LGDCAKVIASENQPVRWTTPLGLPVVQPYCKNERHLIRTSLQVLALQREGKSVEIRKQRT 908
Query: 543 AFPPNYVHSLDGTHMMMTAVACREAGLQFAGVHDSFWTHACDIEQMNQILREKFVELYNM 722
AFPPN+VHSLDG+HMMMTAVACR+AGL FAGVHDSFWTHACD+++MNQILR+KFVELYNM
Sbjct: 909 AFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDSFWTHACDVDEMNQILRKKFVELYNM 968
Query: 723 PILENLLESFQASYPTSTFPPLPERGNFNLEEVLESPYFFN 845
PILENLLESFQ SYPT +FPPLPERGNF+LEEVLESPYFFN
Sbjct: 969 PILENLLESFQTSYPTLSFPPLPERGNFDLEEVLESPYFFN 1009
>ref|XP_004287148.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
[Fragaria vesca subsp. vesca]
Length = 973
Score = 486 bits (1250), Expect = e-134
Identities = 229/281 (81%), Positives = 267/281 (95%)
Frame = +3
Query: 3 AAAVNLVAGEKPADVYSDIAARVREIMEEDSRKDPETNPNALLAKVLLDQVDRKLVKQTV 182
AAAVNLVAGEKPADVYS+IA RV +IM+ DS KDP TNPNALLAKVL++Q+DRKLVKQTV
Sbjct: 693 AAAVNLVAGEKPADVYSEIAVRVHDIMKRDSNKDPTTNPNALLAKVLVNQIDRKLVKQTV 752
Query: 183 MTSVYGVTFVGAREQIKRRLEEKDLITDDRLLFTAACYSAKVTMSALGQLFQAARSIMDW 362
MTSVYGVT+VGAREQIKRRLEEK LITDDRLLFTAACY+AKVT++ALG++FQAAR IM W
Sbjct: 753 MTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFTAACYAAKVTLAALGEIFQAARGIMSW 812
Query: 363 LGDCAKVVAAENEPVRWTTPLGLPVIQPYCKNKRHLIKTSLQVLALQKEGDGIEVKKQRT 542
LGDCAKV+A+EN+PVRWTTPLGLPV+QPYCK++RHLI+TSLQVLALQ+E + ++V+KQRT
Sbjct: 813 LGDCAKVIASENQPVRWTTPLGLPVVQPYCKSERHLIRTSLQVLALQRESNLVDVRKQRT 872
Query: 543 AFPPNYVHSLDGTHMMMTAVACREAGLQFAGVHDSFWTHACDIEQMNQILREKFVELYNM 722
AFPPN+VHSLDG+HMMMTA+ACR+AG++FAGVHDSFWTHACD++QMNQILRE FVELY+
Sbjct: 873 AFPPNFVHSLDGSHMMMTALACRDAGIRFAGVHDSFWTHACDVDQMNQILRENFVELYSK 932
Query: 723 PILENLLESFQASYPTSTFPPLPERGNFNLEEVLESPYFFN 845
PILENLLESFQA+YP TFPPLPERG+F+L+EVL+SPYFFN
Sbjct: 933 PILENLLESFQAAYPELTFPPLPERGDFDLQEVLKSPYFFN 973
>ref|XP_006453567.1| hypothetical protein CICLE_v10007333mg [Citrus clementina]
gi|557556793|gb|ESR66807.1| hypothetical protein
CICLE_v10007333mg [Citrus clementina]
Length = 986
Score = 484 bits (1247), Expect = e-134
Identities = 231/281 (82%), Positives = 263/281 (93%)
Frame = +3
Query: 3 AAAVNLVAGEKPADVYSDIAARVREIMEEDSRKDPETNPNALLAKVLLDQVDRKLVKQTV 182
AAAVNLVAGEKPADVYS+IA RV EIM+ DS KD +P ALLAK+L+DQVDRKLVKQTV
Sbjct: 706 AAAVNLVAGEKPADVYSEIAVRVHEIMKRDSNKDHSKHPQALLAKILIDQVDRKLVKQTV 765
Query: 183 MTSVYGVTFVGAREQIKRRLEEKDLITDDRLLFTAACYSAKVTMSALGQLFQAARSIMDW 362
MTSVYGVTFVGAREQIKRRLEEK ITDDR LF AACY+AKVT++ALG++F+AARSIM W
Sbjct: 766 MTSVYGVTFVGAREQIKRRLEEKGHITDDRQLFAAACYAAKVTLTALGEIFEAARSIMGW 825
Query: 363 LGDCAKVVAAENEPVRWTTPLGLPVIQPYCKNKRHLIKTSLQVLALQKEGDGIEVKKQRT 542
LGDCAKV+A+EN+PVRWTTPLGLPV+QPYCKN+RHLI+TSLQVLALQ+EG+ +E++KQRT
Sbjct: 826 LGDCAKVIASENQPVRWTTPLGLPVVQPYCKNERHLIRTSLQVLALQREGNLVEIRKQRT 885
Query: 543 AFPPNYVHSLDGTHMMMTAVACREAGLQFAGVHDSFWTHACDIEQMNQILREKFVELYNM 722
AFPPN+VHSLDG+HMMMTAVACR+AGL FAGVHDSFWTHACD+++MNQILR+KFVELYNM
Sbjct: 886 AFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDSFWTHACDVDEMNQILRKKFVELYNM 945
Query: 723 PILENLLESFQASYPTSTFPPLPERGNFNLEEVLESPYFFN 845
P+LENLLESFQ SYPT +FP LPERGNF+LEEVLESPYFFN
Sbjct: 946 PMLENLLESFQTSYPTLSFPSLPERGNFDLEEVLESPYFFN 986
>ref|XP_006453566.1| hypothetical protein CICLE_v10007333mg [Citrus clementina]
gi|557556792|gb|ESR66806.1| hypothetical protein
CICLE_v10007333mg [Citrus clementina]
Length = 1012
Score = 484 bits (1247), Expect = e-134
Identities = 231/281 (82%), Positives = 263/281 (93%)
Frame = +3
Query: 3 AAAVNLVAGEKPADVYSDIAARVREIMEEDSRKDPETNPNALLAKVLLDQVDRKLVKQTV 182
AAAVNLVAGEKPADVYS+IA RV EIM+ DS KD +P ALLAK+L+DQVDRKLVKQTV
Sbjct: 732 AAAVNLVAGEKPADVYSEIAVRVHEIMKRDSNKDHSKHPQALLAKILIDQVDRKLVKQTV 791
Query: 183 MTSVYGVTFVGAREQIKRRLEEKDLITDDRLLFTAACYSAKVTMSALGQLFQAARSIMDW 362
MTSVYGVTFVGAREQIKRRLEEK ITDDR LF AACY+AKVT++ALG++F+AARSIM W
Sbjct: 792 MTSVYGVTFVGAREQIKRRLEEKGHITDDRQLFAAACYAAKVTLTALGEIFEAARSIMGW 851
Query: 363 LGDCAKVVAAENEPVRWTTPLGLPVIQPYCKNKRHLIKTSLQVLALQKEGDGIEVKKQRT 542
LGDCAKV+A+EN+PVRWTTPLGLPV+QPYCKN+RHLI+TSLQVLALQ+EG+ +E++KQRT
Sbjct: 852 LGDCAKVIASENQPVRWTTPLGLPVVQPYCKNERHLIRTSLQVLALQREGNLVEIRKQRT 911
Query: 543 AFPPNYVHSLDGTHMMMTAVACREAGLQFAGVHDSFWTHACDIEQMNQILREKFVELYNM 722
AFPPN+VHSLDG+HMMMTAVACR+AGL FAGVHDSFWTHACD+++MNQILR+KFVELYNM
Sbjct: 912 AFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDSFWTHACDVDEMNQILRKKFVELYNM 971
Query: 723 PILENLLESFQASYPTSTFPPLPERGNFNLEEVLESPYFFN 845
P+LENLLESFQ SYPT +FP LPERGNF+LEEVLESPYFFN
Sbjct: 972 PMLENLLESFQTSYPTLSFPSLPERGNFDLEEVLESPYFFN 1012
>gb|EMJ04424.1| hypothetical protein PRUPE_ppa000868mg [Prunus persica]
Length = 976
Score = 483 bits (1242), Expect = e-133
Identities = 226/281 (80%), Positives = 267/281 (95%)
Frame = +3
Query: 3 AAAVNLVAGEKPADVYSDIAARVREIMEEDSRKDPETNPNALLAKVLLDQVDRKLVKQTV 182
AAAVNLV G+KPADVYS+IAARV EIM+ DS KDP T+PNALLA++L++Q+DRKLVKQTV
Sbjct: 696 AAAVNLVDGDKPADVYSEIAARVHEIMKRDSNKDPTTSPNALLARILVNQIDRKLVKQTV 755
Query: 183 MTSVYGVTFVGAREQIKRRLEEKDLITDDRLLFTAACYSAKVTMSALGQLFQAARSIMDW 362
MTSVYGVT+VGAREQIKRRLEEK LITDDRLLFTAACY+AKVT++ALG++FQAAR IM W
Sbjct: 756 MTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFTAACYAAKVTLAALGEIFQAARGIMSW 815
Query: 363 LGDCAKVVAAENEPVRWTTPLGLPVIQPYCKNKRHLIKTSLQVLALQKEGDGIEVKKQRT 542
LGDCAKV+A+EN+PVRWTTPLGLPV+QPYCK++RHLI+TSLQVLALQ+E + ++++KQRT
Sbjct: 816 LGDCAKVIASENQPVRWTTPLGLPVVQPYCKSERHLIRTSLQVLALQRESNSVDIRKQRT 875
Query: 543 AFPPNYVHSLDGTHMMMTAVACREAGLQFAGVHDSFWTHACDIEQMNQILREKFVELYNM 722
AFPPN+VHSLDG+HMMMTA+ACR+AGL+FAGVHDSFWTH CD++QMN+ILREKFVELY+M
Sbjct: 876 AFPPNFVHSLDGSHMMMTALACRDAGLRFAGVHDSFWTHPCDVDQMNEILREKFVELYSM 935
Query: 723 PILENLLESFQASYPTSTFPPLPERGNFNLEEVLESPYFFN 845
PILE+LLESFQASYP TFPPLPERG+F+L +VLESPYFFN
Sbjct: 936 PILESLLESFQASYPALTFPPLPERGDFDLLQVLESPYFFN 976
>gb|EOY31496.1| DNA/RNA polymerases superfamily protein isoform 1 [Theobroma cacao]
Length = 978
Score = 481 bits (1238), Expect = e-133
Identities = 230/281 (81%), Positives = 261/281 (92%)
Frame = +3
Query: 3 AAAVNLVAGEKPADVYSDIAARVREIMEEDSRKDPETNPNALLAKVLLDQVDRKLVKQTV 182
AAAVNLVAGEKPADVYS+IA RV IM+ DS KDP TNPNA LAK+L+DQVDRKLVKQTV
Sbjct: 698 AAAVNLVAGEKPADVYSEIAVRVHNIMKRDSDKDPATNPNASLAKLLIDQVDRKLVKQTV 757
Query: 183 MTSVYGVTFVGAREQIKRRLEEKDLITDDRLLFTAACYSAKVTMSALGQLFQAARSIMDW 362
MTSVYGVTFVGAREQIKRRLEEK ITDDR+LF AACY+AKVT++ALG+LFQAAR+IM W
Sbjct: 758 MTSVYGVTFVGAREQIKRRLEEKGHITDDRVLFAAACYTAKVTLAALGELFQAARNIMGW 817
Query: 363 LGDCAKVVAAENEPVRWTTPLGLPVIQPYCKNKRHLIKTSLQVLALQKEGDGIEVKKQRT 542
LGDCAKV+A+EN+PV+WTTPLGLPV+QPY K++RHLI+TSLQVLALQ+EGD +EV+KQRT
Sbjct: 818 LGDCAKVIASENQPVQWTTPLGLPVVQPYYKSERHLIRTSLQVLALQREGDSVEVRKQRT 877
Query: 543 AFPPNYVHSLDGTHMMMTAVACREAGLQFAGVHDSFWTHACDIEQMNQILREKFVELYNM 722
AFPPN+VHSLDG+HMMMTAVACR+AGL FAGVHDSFWTHACD+E+MNQILREKFVELY+M
Sbjct: 878 AFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDSFWTHACDVEKMNQILREKFVELYSM 937
Query: 723 PILENLLESFQASYPTSTFPPLPERGNFNLEEVLESPYFFN 845
P+LENL ES Q SYP+ FPPLPERGNF+L EVL+SPYFFN
Sbjct: 938 PVLENLFESVQTSYPSLVFPPLPERGNFDLREVLKSPYFFN 978
>emb|CBI36559.3| unnamed protein product [Vitis vinifera]
Length = 808
Score = 480 bits (1236), Expect = e-133
Identities = 229/281 (81%), Positives = 264/281 (93%)
Frame = +3
Query: 3 AAAVNLVAGEKPADVYSDIAARVREIMEEDSRKDPETNPNALLAKVLLDQVDRKLVKQTV 182
A+AVNLVAGEKPADVYS+IAARV EIM+ DS KDP T+P ALLAKVL+ QVDRKLVKQTV
Sbjct: 528 ASAVNLVAGEKPADVYSEIAARVHEIMKRDSNKDPATDPKALLAKVLIGQVDRKLVKQTV 587
Query: 183 MTSVYGVTFVGAREQIKRRLEEKDLITDDRLLFTAACYSAKVTMSALGQLFQAARSIMDW 362
MTSVYGVT++GAREQIKRRL EK LITD+RLLFTAACY+AKVT++ALG++FQAAR IM W
Sbjct: 588 MTSVYGVTYIGAREQIKRRLAEKGLITDERLLFTAACYAAKVTLAALGEIFQAARDIMAW 647
Query: 363 LGDCAKVVAAENEPVRWTTPLGLPVIQPYCKNKRHLIKTSLQVLALQKEGDGIEVKKQRT 542
LG+CAKV+A+EN+PV+WTTPLGLPVIQPYCK++RHLI+TSLQVLALQ+EG + ++KQRT
Sbjct: 648 LGECAKVIASENQPVQWTTPLGLPVIQPYCKSERHLIRTSLQVLALQREGSVVVIRKQRT 707
Query: 543 AFPPNYVHSLDGTHMMMTAVACREAGLQFAGVHDSFWTHACDIEQMNQILREKFVELYNM 722
AFPPN+VHSLDG+HMMMTAVACR+AGL FAGVHDSFWTHACD+++MNQILREKFVELY+M
Sbjct: 708 AFPPNFVHSLDGSHMMMTAVACRDAGLCFAGVHDSFWTHACDVDKMNQILREKFVELYSM 767
Query: 723 PILENLLESFQASYPTSTFPPLPERGNFNLEEVLESPYFFN 845
PILENLLESFQ S+PT TFPPLP+RGNF+L EVLESPYFFN
Sbjct: 768 PILENLLESFQTSHPTLTFPPLPDRGNFDLREVLESPYFFN 808
>ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Vitis
vinifera]
Length = 979
Score = 480 bits (1236), Expect = e-133
Identities = 229/281 (81%), Positives = 264/281 (93%)
Frame = +3
Query: 3 AAAVNLVAGEKPADVYSDIAARVREIMEEDSRKDPETNPNALLAKVLLDQVDRKLVKQTV 182
A+AVNLVAGEKPADVYS+IAARV EIM+ DS KDP T+P ALLAKVL+ QVDRKLVKQTV
Sbjct: 699 ASAVNLVAGEKPADVYSEIAARVHEIMKRDSNKDPATDPKALLAKVLIGQVDRKLVKQTV 758
Query: 183 MTSVYGVTFVGAREQIKRRLEEKDLITDDRLLFTAACYSAKVTMSALGQLFQAARSIMDW 362
MTSVYGVT++GAREQIKRRL EK LITD+RLLFTAACY+AKVT++ALG++FQAAR IM W
Sbjct: 759 MTSVYGVTYIGAREQIKRRLAEKGLITDERLLFTAACYAAKVTLAALGEIFQAARDIMAW 818
Query: 363 LGDCAKVVAAENEPVRWTTPLGLPVIQPYCKNKRHLIKTSLQVLALQKEGDGIEVKKQRT 542
LG+CAKV+A+EN+PV+WTTPLGLPVIQPYCK++RHLI+TSLQVLALQ+EG + ++KQRT
Sbjct: 819 LGECAKVIASENQPVQWTTPLGLPVIQPYCKSERHLIRTSLQVLALQREGSVVVIRKQRT 878
Query: 543 AFPPNYVHSLDGTHMMMTAVACREAGLQFAGVHDSFWTHACDIEQMNQILREKFVELYNM 722
AFPPN+VHSLDG+HMMMTAVACR+AGL FAGVHDSFWTHACD+++MNQILREKFVELY+M
Sbjct: 879 AFPPNFVHSLDGSHMMMTAVACRDAGLCFAGVHDSFWTHACDVDKMNQILREKFVELYSM 938
Query: 723 PILENLLESFQASYPTSTFPPLPERGNFNLEEVLESPYFFN 845
PILENLLESFQ S+PT TFPPLP+RGNF+L EVLESPYFFN
Sbjct: 939 PILENLLESFQTSHPTLTFPPLPDRGNFDLREVLESPYFFN 979
>ref|XP_006343727.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Solanum
tuberosum]
Length = 1015
Score = 477 bits (1228), Expect = e-132
Identities = 228/281 (81%), Positives = 262/281 (93%)
Frame = +3
Query: 3 AAAVNLVAGEKPADVYSDIAARVREIMEEDSRKDPETNPNALLAKVLLDQVDRKLVKQTV 182
AAAVNLVAGEKPADVY++IA RV I+ DS KDP T+PNALLAK+L+DQVDRKLVKQTV
Sbjct: 735 AAAVNLVAGEKPADVYTEIALRVDHIIRGDSTKDPATDPNALLAKLLIDQVDRKLVKQTV 794
Query: 183 MTSVYGVTFVGAREQIKRRLEEKDLITDDRLLFTAACYSAKVTMSALGQLFQAARSIMDW 362
MTSVYGVT+VGAREQIKRRLEEK LI DDRLLFTA+CY+AKVT++ALG+LFQAAR M W
Sbjct: 795 MTSVYGVTYVGAREQIKRRLEEKGLIDDDRLLFTASCYAAKVTLAALGELFQAARGTMTW 854
Query: 363 LGDCAKVVAAENEPVRWTTPLGLPVIQPYCKNKRHLIKTSLQVLALQKEGDGIEVKKQRT 542
LGDCAKV+A+EN+PVRWTTPLGLPV+QPY K +RH+I+TSLQVLALQ+EGD +EV+KQRT
Sbjct: 855 LGDCAKVIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDAVEVRKQRT 914
Query: 543 AFPPNYVHSLDGTHMMMTAVACREAGLQFAGVHDSFWTHACDIEQMNQILREKFVELYNM 722
AFPPN+VHSLDG+HMMMTAVACR+AGL FAGVHDSFWTHACD++QMN+ILREKFVELY+M
Sbjct: 915 AFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDSFWTHACDVDQMNRILREKFVELYSM 974
Query: 723 PILENLLESFQASYPTSTFPPLPERGNFNLEEVLESPYFFN 845
PILE+LLESFQ SYP TFPPLP+RG+F+L+EVLESPYFFN
Sbjct: 975 PILEDLLESFQESYPALTFPPLPKRGDFDLQEVLESPYFFN 1015
>gb|EOY31497.1| DNA/RNA polymerases superfamily protein isoform 2 [Theobroma cacao]
Length = 857
Score = 476 bits (1226), Expect = e-132
Identities = 230/282 (81%), Positives = 261/282 (92%), Gaps = 1/282 (0%)
Frame = +3
Query: 3 AAAVNLVAGEKPADVYSDIAARVREIMEEDSRKDPETNPNALLAKVLLDQVDRKLVKQTV 182
AAAVNLVAGEKPADVYS+IA RV IM+ DS KDP TNPNA LAK+L+DQVDRKLVKQTV
Sbjct: 576 AAAVNLVAGEKPADVYSEIAVRVHNIMKRDSDKDPATNPNASLAKLLIDQVDRKLVKQTV 635
Query: 183 MTSVYGVTFVGAREQIKRRLEEKDLITDDRLLFTAACYSAKVTMSALGQLFQAARSIMDW 362
MTSVYGVTFVGAREQIKRRLEEK ITDDR+LF AACY+AKVT++ALG+LFQAAR+IM W
Sbjct: 636 MTSVYGVTFVGAREQIKRRLEEKGHITDDRVLFAAACYTAKVTLAALGELFQAARNIMGW 695
Query: 363 LGDCAKVVAAENEPVRWTTPLGLPVIQPYCKNKRHLIKTSLQVLALQKEGDG-IEVKKQR 539
LGDCAKV+A+EN+PV+WTTPLGLPV+QPY K++RHLI+TSLQVLALQ+EGD +EV+KQR
Sbjct: 696 LGDCAKVIASENQPVQWTTPLGLPVVQPYYKSERHLIRTSLQVLALQREGDSVVEVRKQR 755
Query: 540 TAFPPNYVHSLDGTHMMMTAVACREAGLQFAGVHDSFWTHACDIEQMNQILREKFVELYN 719
TAFPPN+VHSLDG+HMMMTAVACR+AGL FAGVHDSFWTHACD+E+MNQILREKFVELY+
Sbjct: 756 TAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDSFWTHACDVEKMNQILREKFVELYS 815
Query: 720 MPILENLLESFQASYPTSTFPPLPERGNFNLEEVLESPYFFN 845
MP+LENL ES Q SYP+ FPPLPERGNF+L EVL+SPYFFN
Sbjct: 816 MPVLENLFESVQTSYPSLVFPPLPERGNFDLREVLKSPYFFN 857
>ref|XP_004242994.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Solanum
lycopersicum]
Length = 1007
Score = 476 bits (1226), Expect = e-132
Identities = 228/281 (81%), Positives = 261/281 (92%)
Frame = +3
Query: 3 AAAVNLVAGEKPADVYSDIAARVREIMEEDSRKDPETNPNALLAKVLLDQVDRKLVKQTV 182
AAAVNLVAGEKPADVY++IA RV I+ DS KDP T+PNALLAK+L+DQVDRKLVKQTV
Sbjct: 727 AAAVNLVAGEKPADVYTEIALRVDHIIRGDSTKDPATDPNALLAKLLIDQVDRKLVKQTV 786
Query: 183 MTSVYGVTFVGAREQIKRRLEEKDLITDDRLLFTAACYSAKVTMSALGQLFQAARSIMDW 362
MTSVYGVT+VGAREQIKRRLEEK LI DDRLLFTA+CY+AKVT++ALG+LFQAAR M W
Sbjct: 787 MTSVYGVTYVGAREQIKRRLEEKGLIDDDRLLFTASCYAAKVTLAALGELFQAARGTMTW 846
Query: 363 LGDCAKVVAAENEPVRWTTPLGLPVIQPYCKNKRHLIKTSLQVLALQKEGDGIEVKKQRT 542
LGDCAKV+A+EN+PVRWTTPLGLPV+QPY K +RH+I+TSLQVLALQ+EGD +EV+KQRT
Sbjct: 847 LGDCAKVIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDAVEVRKQRT 906
Query: 543 AFPPNYVHSLDGTHMMMTAVACREAGLQFAGVHDSFWTHACDIEQMNQILREKFVELYNM 722
AFPPN+VHSLDG+HMMMTAVACR+AGL FAGVHDSFWTHACD++QMN+ILREKFVELY+M
Sbjct: 907 AFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDSFWTHACDVDQMNRILREKFVELYSM 966
Query: 723 PILENLLESFQASYPTSTFPPLPERGNFNLEEVLESPYFFN 845
PILE+LLESFQ SYP TFPPLP+RG+F+L EVLESPYFFN
Sbjct: 967 PILEDLLESFQESYPALTFPPLPKRGDFDLREVLESPYFFN 1007
>sp|P69242.1|RPOT3_NICSY RecName: Full=DNA-directed RNA polymerase 3, chloroplastic; AltName:
Full=NsRpoT-C; AltName: Full=T7 bacteriophage-type single
subunit RNA polymerase 3; Flags: Precursor
gi|59800203|sp|P69243.1|RPO3A_TOBAC RecName:
Full=DNA-directed RNA polymerase 3A, chloroplastic;
AltName: Full=NictaRpoT3-syl; AltName: Full=T7
bacteriophage-type single subunit RNA polymerase 3A;
Flags: Precursor gi|21425641|emb|CAC82576.3| phage-type
RNA polymerase [Nicotiana sylvestris]
gi|21425679|emb|CAC95027.2| plastid RNA polymerase
[Nicotiana tabacum] gi|24475541|dbj|BAC22693.1| T7
bacteriophage-type single subunit RNA polymerase
[Nicotiana sylvestris] gi|24475543|dbj|BAC22694.1| T7
bacteriophage-type single subunit RNA polymerase
[Nicotiana sylvestris]
Length = 977
Score = 474 bits (1221), Expect = e-131
Identities = 228/281 (81%), Positives = 262/281 (93%)
Frame = +3
Query: 3 AAAVNLVAGEKPADVYSDIAARVREIMEEDSRKDPETNPNALLAKVLLDQVDRKLVKQTV 182
AAAVNLVAG+KPADVY++IA RV I+ DS KDP T+PNALLAK+L+DQVDRKLVKQTV
Sbjct: 697 AAAVNLVAGDKPADVYTEIALRVDHIIRGDSIKDPATDPNALLAKLLIDQVDRKLVKQTV 756
Query: 183 MTSVYGVTFVGAREQIKRRLEEKDLITDDRLLFTAACYSAKVTMSALGQLFQAARSIMDW 362
MTSVYGVT+VGAREQIKRRLEEK LI DDRLLFTA+CY+AKVT++ALG+LFQAAR M W
Sbjct: 757 MTSVYGVTYVGAREQIKRRLEEKGLIDDDRLLFTASCYAAKVTLAALGELFQAARGTMTW 816
Query: 363 LGDCAKVVAAENEPVRWTTPLGLPVIQPYCKNKRHLIKTSLQVLALQKEGDGIEVKKQRT 542
LGDCAKV+A+EN+PVRWTTPLGLPV+QPY K +RH+I+TSLQVLALQ+EGD +EV+KQRT
Sbjct: 817 LGDCAKVIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDTVEVRKQRT 876
Query: 543 AFPPNYVHSLDGTHMMMTAVACREAGLQFAGVHDSFWTHACDIEQMNQILREKFVELYNM 722
AFPPN+VHSLDG+HMMMTAVACR+AGLQFAGVHDSFWTHACD++QMN+ILREKFVELY+M
Sbjct: 877 AFPPNFVHSLDGSHMMMTAVACRDAGLQFAGVHDSFWTHACDVDQMNRILREKFVELYSM 936
Query: 723 PILENLLESFQASYPTSTFPPLPERGNFNLEEVLESPYFFN 845
PILE+LLESFQ SYP TFPPLP+RG+F+L EVLESPYFFN
Sbjct: 937 PILEDLLESFQNSYPALTFPPLPKRGDFDLVEVLESPYFFN 977
>sp|Q8L6J1.2|RPO3B_TOBAC RecName: Full=DNA-directed RNA polymerase 3B, chloroplastic; AltName:
Full=NictaRpoT3-tom; AltName: Full=T7 bacteriophage-type
single subunit RNA polymerase 3B; Flags: Precursor
gi|21425667|emb|CAC95021.2| chloroplast RNA polymerase
[Nicotiana tabacum]
Length = 977
Score = 474 bits (1219), Expect = e-131
Identities = 226/281 (80%), Positives = 260/281 (92%)
Frame = +3
Query: 3 AAAVNLVAGEKPADVYSDIAARVREIMEEDSRKDPETNPNALLAKVLLDQVDRKLVKQTV 182
AAAVNLVAGEKPADVY++IA RV I+ DS KDP +PNALLAK+L+DQVDRKLVKQTV
Sbjct: 697 AAAVNLVAGEKPADVYTEIALRVDHIIRGDSIKDPAIDPNALLAKLLIDQVDRKLVKQTV 756
Query: 183 MTSVYGVTFVGAREQIKRRLEEKDLITDDRLLFTAACYSAKVTMSALGQLFQAARSIMDW 362
MTSVYGVT+VGAREQIKRRLEEK LI DDRLLFTA+CY+AKVT++ALG+LFQAAR M W
Sbjct: 757 MTSVYGVTYVGAREQIKRRLEEKGLIDDDRLLFTASCYAAKVTLAALGELFQAARGTMTW 816
Query: 363 LGDCAKVVAAENEPVRWTTPLGLPVIQPYCKNKRHLIKTSLQVLALQKEGDGIEVKKQRT 542
LGDCAKV+A EN+PVRWTTPLGLPV+QPY K +RH+I+TSLQ+LALQ+EGD +EV+KQRT
Sbjct: 817 LGDCAKVIALENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQILALQREGDAVEVRKQRT 876
Query: 543 AFPPNYVHSLDGTHMMMTAVACREAGLQFAGVHDSFWTHACDIEQMNQILREKFVELYNM 722
AFPPN+VHSLDG+HMMMTAVACR+AGLQFAGVHDSFWTHACD++QMN+ILREKFVELY++
Sbjct: 877 AFPPNFVHSLDGSHMMMTAVACRDAGLQFAGVHDSFWTHACDVDQMNRILREKFVELYSL 936
Query: 723 PILENLLESFQASYPTSTFPPLPERGNFNLEEVLESPYFFN 845
PILE+LLE+FQ SYP TFPPLP+RG+FNL EVLESPYFFN
Sbjct: 937 PILEDLLENFQKSYPALTFPPLPKRGDFNLREVLESPYFFN 977
>ref|XP_002325119.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
gi|222866553|gb|EEF03684.1| DNA-directed RNA polymerase
family protein [Populus trichocarpa]
Length = 882
Score = 470 bits (1210), Expect = e-130
Identities = 224/281 (79%), Positives = 258/281 (91%)
Frame = +3
Query: 3 AAAVNLVAGEKPADVYSDIAARVREIMEEDSRKDPETNPNALLAKVLLDQVDRKLVKQTV 182
AAAVNLVA EKP+DVYS+IA RV EI+ DS KDP TNP+ALLAK+L+DQVDRKLVKQTV
Sbjct: 602 AAAVNLVAAEKPSDVYSEIAVRVHEIIRRDSNKDPATNPHALLAKILVDQVDRKLVKQTV 661
Query: 183 MTSVYGVTFVGAREQIKRRLEEKDLITDDRLLFTAACYSAKVTMSALGQLFQAARSIMDW 362
MTSVYGVT+VGAREQIKRRLEEK ITDDRLLF+AACY+AKVT++ALG+LFQAAR IM W
Sbjct: 662 MTSVYGVTYVGAREQIKRRLEEKGHITDDRLLFSAACYTAKVTLTALGELFQAARDIMSW 721
Query: 363 LGDCAKVVAAENEPVRWTTPLGLPVIQPYCKNKRHLIKTSLQVLALQKEGDGIEVKKQRT 542
LGDCAK++A+E++PV+WTTPLGLPV+QPY K +RHLIKTSLQ+LALQ+EG ++V+KQRT
Sbjct: 722 LGDCAKIIASEDQPVQWTTPLGLPVVQPYYKTERHLIKTSLQILALQREGSSVQVRKQRT 781
Query: 543 AFPPNYVHSLDGTHMMMTAVACREAGLQFAGVHDSFWTHACDIEQMNQILREKFVELYNM 722
AFPPN+VHSLDG+HMMMTAVACR+AGL FAGVHDSFWTHA D++ MN+ILREKFVELYNM
Sbjct: 782 AFPPNFVHSLDGSHMMMTAVACRDAGLCFAGVHDSFWTHATDVDLMNRILREKFVELYNM 841
Query: 723 PILENLLESFQASYPTSTFPPLPERGNFNLEEVLESPYFFN 845
PILENLLE FQ SYPT FPPLPERGNF+L++VL SPYFFN
Sbjct: 842 PILENLLEDFQTSYPTLQFPPLPERGNFDLQKVLRSPYFFN 882
>ref|XP_006296121.1| hypothetical protein CARUB_v10025273mg [Capsella rubella]
gi|482564829|gb|EOA29019.1| hypothetical protein
CARUB_v10025273mg [Capsella rubella]
Length = 991
Score = 465 bits (1197), Expect = e-128
Identities = 217/281 (77%), Positives = 261/281 (92%)
Frame = +3
Query: 3 AAAVNLVAGEKPADVYSDIAARVREIMEEDSRKDPETNPNALLAKVLLDQVDRKLVKQTV 182
AAAVNLVAGEKPADVYS+I+ RV EIM++DS KDPE+NP A LAK+L+ QVDRKLVKQTV
Sbjct: 711 AAAVNLVAGEKPADVYSEISRRVHEIMKKDSSKDPESNPTAALAKILITQVDRKLVKQTV 770
Query: 183 MTSVYGVTFVGAREQIKRRLEEKDLITDDRLLFTAACYSAKVTMSALGQLFQAARSIMDW 362
MTSVYGVT+VGAREQIKRRLEEK +ITD+R+LF AACYSAKVT++ALG++F+AAR+IM W
Sbjct: 771 MTSVYGVTYVGAREQIKRRLEEKGVITDERMLFAAACYSAKVTLAALGEIFEAARAIMSW 830
Query: 363 LGDCAKVVAAENEPVRWTTPLGLPVIQPYCKNKRHLIKTSLQVLALQKEGDGIEVKKQRT 542
LGDCAK++A++N PVRW TPLGLPV+QPYC+++RHLI+TSLQVLALQ+EG+ ++V+KQRT
Sbjct: 831 LGDCAKIIASDNHPVRWITPLGLPVVQPYCRSERHLIRTSLQVLALQREGNTVDVRKQRT 890
Query: 543 AFPPNYVHSLDGTHMMMTAVACREAGLQFAGVHDSFWTHACDIEQMNQILREKFVELYNM 722
AFPPN+VHSLDGTHMMMTAVACREAGL FAGVHDS+WTHACD++ MN+ILREKFVELYN
Sbjct: 891 AFPPNFVHSLDGTHMMMTAVACREAGLNFAGVHDSYWTHACDVDTMNRILREKFVELYNT 950
Query: 723 PILENLLESFQASYPTSTFPPLPERGNFNLEEVLESPYFFN 845
PILE+LL+SFQ SYP FPP+P+RG+F+L+EVL+S YFFN
Sbjct: 951 PILEDLLQSFQESYPNLVFPPVPKRGDFDLKEVLKSQYFFN 991
>ref|NP_179989.1| DNA-directed RNA polymerase 3 [Arabidopsis thaliana]
gi|3914826|sp|O24600.1|RPOT3_ARATH RecName:
Full=DNA-directed RNA polymerase 3, chloroplastic; Flags:
Precursor gi|2330560|emb|CAA69972.1| chloroplast
single-subunit DNA-dependent RNA polymerase [Arabidopsis
thaliana] gi|2330564|emb|CAA69717.1| chloroplast
single-subunit DNA-dependent RNA polymerase [Arabidopsis
thaliana] gi|4115372|gb|AAD03373.1| chloroplast single
subunit DNA-dependent RNA polymerase [Arabidopsis
thaliana] gi|110739160|dbj|BAF01496.1| chloroplast single
subunit DNA-dependent RNA polymerase [Arabidopsis
thaliana] gi|330252437|gb|AEC07531.1| DNA-directed RNA
polymerase 3 [Arabidopsis thaliana]
Length = 993
Score = 465 bits (1197), Expect = e-128
Identities = 217/281 (77%), Positives = 261/281 (92%)
Frame = +3
Query: 3 AAAVNLVAGEKPADVYSDIAARVREIMEEDSRKDPETNPNALLAKVLLDQVDRKLVKQTV 182
AAAVNLVAGEKPADVYS+I+ RV EIM++DS KDPE+NP A LAK+L+ QVDRKLVKQTV
Sbjct: 713 AAAVNLVAGEKPADVYSEISRRVHEIMKKDSSKDPESNPTAALAKILITQVDRKLVKQTV 772
Query: 183 MTSVYGVTFVGAREQIKRRLEEKDLITDDRLLFTAACYSAKVTMSALGQLFQAARSIMDW 362
MTSVYGVT+VGAREQIKRRLEEK +ITD+R+LF AACYSAKVT++ALG++F+AAR+IM W
Sbjct: 773 MTSVYGVTYVGAREQIKRRLEEKGVITDERMLFAAACYSAKVTLAALGEIFEAARAIMSW 832
Query: 363 LGDCAKVVAAENEPVRWTTPLGLPVIQPYCKNKRHLIKTSLQVLALQKEGDGIEVKKQRT 542
LGDCAK++A++N PVRW TPLGLPV+QPYC+++RHLI+TSLQVLALQ+EG+ ++V+KQRT
Sbjct: 833 LGDCAKIIASDNHPVRWITPLGLPVVQPYCRSERHLIRTSLQVLALQREGNTVDVRKQRT 892
Query: 543 AFPPNYVHSLDGTHMMMTAVACREAGLQFAGVHDSFWTHACDIEQMNQILREKFVELYNM 722
AFPPN+VHSLDGTHMMMTAVACREAGL FAGVHDS+WTHACD++ MN+ILREKFVELYN
Sbjct: 893 AFPPNFVHSLDGTHMMMTAVACREAGLNFAGVHDSYWTHACDVDTMNRILREKFVELYNT 952
Query: 723 PILENLLESFQASYPTSTFPPLPERGNFNLEEVLESPYFFN 845
PILE+LL+SFQ SYP FPP+P+RG+F+L+EVL+S YFFN
Sbjct: 953 PILEDLLQSFQESYPNLVFPPVPKRGDFDLKEVLKSQYFFN 993
>ref|XP_002880548.1| PDE319/SCA3 [Arabidopsis lyrata subsp. lyrata]
gi|297326387|gb|EFH56807.1| PDE319/SCA3 [Arabidopsis
lyrata subsp. lyrata]
Length = 990
Score = 465 bits (1197), Expect = e-128
Identities = 217/281 (77%), Positives = 261/281 (92%)
Frame = +3
Query: 3 AAAVNLVAGEKPADVYSDIAARVREIMEEDSRKDPETNPNALLAKVLLDQVDRKLVKQTV 182
AAAVNLVAGEKPADVYS+I+ RV EIM++DS KDPE+NP A LAK+L+ QVDRKLVKQTV
Sbjct: 710 AAAVNLVAGEKPADVYSEISRRVHEIMKKDSSKDPESNPTAALAKILITQVDRKLVKQTV 769
Query: 183 MTSVYGVTFVGAREQIKRRLEEKDLITDDRLLFTAACYSAKVTMSALGQLFQAARSIMDW 362
MTSVYGVT+VGAREQIKRRLEEK +ITD+R+LF AACYSAKVT++ALG++F+AAR+IM W
Sbjct: 770 MTSVYGVTYVGAREQIKRRLEEKGVITDERMLFAAACYSAKVTLAALGEIFEAARAIMSW 829
Query: 363 LGDCAKVVAAENEPVRWTTPLGLPVIQPYCKNKRHLIKTSLQVLALQKEGDGIEVKKQRT 542
LGDCAK++A++N PVRW TPLGLPV+QPYC+++RHLI+TSLQVLALQ+EG+ ++V+KQRT
Sbjct: 830 LGDCAKIIASDNHPVRWITPLGLPVVQPYCRSERHLIRTSLQVLALQREGNTVDVRKQRT 889
Query: 543 AFPPNYVHSLDGTHMMMTAVACREAGLQFAGVHDSFWTHACDIEQMNQILREKFVELYNM 722
AFPPN+VHSLDGTHMMMTAVACREAGL FAGVHDS+WTHACD++ MN+ILREKFVELYN
Sbjct: 890 AFPPNFVHSLDGTHMMMTAVACREAGLNFAGVHDSYWTHACDVDTMNRILREKFVELYNT 949
Query: 723 PILENLLESFQASYPTSTFPPLPERGNFNLEEVLESPYFFN 845
PILE+LL+SFQ SYP FPP+P+RG+F+L+EVL+S YFFN
Sbjct: 950 PILEDLLQSFQESYPNLVFPPVPKRGDFDLKEVLKSQYFFN 990
>ref|XP_002308414.1| hypothetical protein POPTR_0006s19490g [Populus trichocarpa]
gi|222854390|gb|EEE91937.1| hypothetical protein
POPTR_0006s19490g [Populus trichocarpa]
Length = 982
Score = 464 bits (1195), Expect = e-128
Identities = 224/281 (79%), Positives = 256/281 (91%)
Frame = +3
Query: 3 AAAVNLVAGEKPADVYSDIAARVREIMEEDSRKDPETNPNALLAKVLLDQVDRKLVKQTV 182
AAAVNLVA EKP+DVYS+IA RV EI+ DS KDP TNP+ALLAKVL+D+VDRKLVKQTV
Sbjct: 702 AAAVNLVAAEKPSDVYSEIATRVHEIIRRDSNKDPATNPHALLAKVLIDEVDRKLVKQTV 761
Query: 183 MTSVYGVTFVGAREQIKRRLEEKDLITDDRLLFTAACYSAKVTMSALGQLFQAARSIMDW 362
MTSVYGVT+VGAREQIKRRLEEK ITDDR+LF+AACY+AKVT++ALG+LFQAAR IM W
Sbjct: 762 MTSVYGVTYVGAREQIKRRLEEKGHITDDRVLFSAACYAAKVTLTALGELFQAARDIMGW 821
Query: 363 LGDCAKVVAAENEPVRWTTPLGLPVIQPYCKNKRHLIKTSLQVLALQKEGDGIEVKKQRT 542
LGDCAKV+A+E++PVRWTTPLGLPV+QPY K +RHLI+TSLQVLALQ+EG ++V+KQRT
Sbjct: 822 LGDCAKVIASEDQPVRWTTPLGLPVVQPYYKTQRHLIRTSLQVLALQREGSSVQVRKQRT 881
Query: 543 AFPPNYVHSLDGTHMMMTAVACREAGLQFAGVHDSFWTHACDIEQMNQILREKFVELYNM 722
AFPPN+VHSLDG+HMMMTAVACR+A L+FAGVHDSFWTHA D + MN+ILREKFVELYNM
Sbjct: 882 AFPPNFVHSLDGSHMMMTAVACRDADLRFAGVHDSFWTHARDADLMNRILREKFVELYNM 941
Query: 723 PILENLLESFQASYPTSTFPPLPERGNFNLEEVLESPYFFN 845
PILENLLE FQ SYPT FP LPERGNF+L+EVL SPYFFN
Sbjct: 942 PILENLLEDFQTSYPTLKFPSLPERGNFDLQEVLRSPYFFN 982
>emb|CAC95026.1| plastid RNA polymerase [Nicotiana tabacum]
Length = 557
Score = 464 bits (1195), Expect = e-128
Identities = 224/281 (79%), Positives = 257/281 (91%)
Frame = +3
Query: 3 AAAVNLVAGEKPADVYSDIAARVREIMEEDSRKDPETNPNALLAKVLLDQVDRKLVKQTV 182
AAAVNLVAGEKPADVY++IA RV I+ DS KDP +PNALLAK+L+DQVDRKLVKQTV
Sbjct: 280 AAAVNLVAGEKPADVYTEIALRVDHIIRGDSIKDPAIDPNALLAKLLIDQVDRKLVKQTV 339
Query: 183 MTSVYGVTFVGAREQIKRRLEEKDLITDDRLLFTAACYSAKVTMSALGQLFQAARSIMDW 362
MTSVYGVT+VGAREQIKRRLEEK LI DDRLLFTA+CY VT++ALG+LFQAAR M W
Sbjct: 340 MTSVYGVTYVGAREQIKRRLEEKGLIDDDRLLFTASCY---VTLAALGELFQAARGTMTW 396
Query: 363 LGDCAKVVAAENEPVRWTTPLGLPVIQPYCKNKRHLIKTSLQVLALQKEGDGIEVKKQRT 542
LGDCAKV+A EN+PVRWTTPLGLPV+QPY K +RH+I+TSLQ+LALQ+EGD +EV+KQRT
Sbjct: 397 LGDCAKVIALENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQILALQREGDAVEVRKQRT 456
Query: 543 AFPPNYVHSLDGTHMMMTAVACREAGLQFAGVHDSFWTHACDIEQMNQILREKFVELYNM 722
AFPPN+VHSLDG+HMMMTAVACR+AGLQFAGVHDSFWTHACD++QMN+ILREKFVELY++
Sbjct: 457 AFPPNFVHSLDGSHMMMTAVACRDAGLQFAGVHDSFWTHACDVDQMNRILREKFVELYSL 516
Query: 723 PILENLLESFQASYPTSTFPPLPERGNFNLEEVLESPYFFN 845
PILE+LLE+FQ SYP TFPPLP+RG+FNL EVLESPYFFN
Sbjct: 517 PILEDLLENFQKSYPALTFPPLPKRGDFNLREVLESPYFFN 557