BLASTX nr result

ID: Achyranthes23_contig00034192 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00034192
         (361 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006470664.1| PREDICTED: zinc finger CCCH domain-containin...    57   3e-06
ref|XP_006470663.1| PREDICTED: zinc finger CCCH domain-containin...    57   3e-06
ref|XP_002513525.1| nucleic acid binding protein, putative [Rici...    56   4e-06

>ref|XP_006470664.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
           isoform X2 [Citrus sinensis]
          Length = 640

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 24/42 (57%), Positives = 32/42 (76%)
 Frame = -2

Query: 240 DSNGNVQSNENDNKPKAEESELFESGLEHILPDNLFASPKKS 115
           + N N   N+ + KP ++E++L +S LEHILPDNLFASPKKS
Sbjct: 538 NKNNNSDGNDKEEKPNSDENDLCDSSLEHILPDNLFASPKKS 579


>ref|XP_006470663.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
           isoform X1 [Citrus sinensis]
          Length = 641

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 24/42 (57%), Positives = 32/42 (76%)
 Frame = -2

Query: 240 DSNGNVQSNENDNKPKAEESELFESGLEHILPDNLFASPKKS 115
           + N N   N+ + KP ++E++L +S LEHILPDNLFASPKKS
Sbjct: 539 NKNNNSDGNDKEEKPNSDENDLCDSSLEHILPDNLFASPKKS 580


>ref|XP_002513525.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223547433|gb|EEF48928.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 700

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 32/72 (44%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
 Frame = -2

Query: 312 DNNGSPTGASDEQVVGEG---FNGVLCDSNGNVQSNENDNKPKAEESELFESGLEHILPD 142
           +N G P   +    V +G    N V   SNGN  ++  + K   EE++L ES LEHILPD
Sbjct: 571 ENGGIPDAVASRNGVADGELEVNPVSNHSNGNSYNSSTEEKSSTEENDLRES-LEHILPD 629

Query: 141 NLFASPKKSVSE 106
           NLF SPKKS  +
Sbjct: 630 NLFTSPKKSAGD 641


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