BLASTX nr result
ID: Achyranthes23_contig00034076
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Achyranthes23_contig00034076
(214 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002525464.1| RNA binding protein, putative [Ricinus commu... 62 8e-08
ref|XP_002319145.2| hypothetical protein POPTR_0013s05120g [Popu... 61 1e-07
ref|XP_002325403.2| RNA recognition motif-containing family prot... 61 1e-07
gb|EXB36255.1| RNA-binding protein 40 [Morus notabilis] 60 2e-07
gb|EOY10725.1| RNA-binding family protein isoform 6 [Theobroma c... 60 2e-07
gb|EOY10723.1| RNA-binding family protein isoform 4 [Theobroma c... 60 2e-07
gb|EOY10720.1| RNA-binding family protein isoform 1 [Theobroma c... 60 2e-07
ref|XP_002465331.1| hypothetical protein SORBIDRAFT_01g036600 [S... 60 2e-07
ref|XP_006479054.1| PREDICTED: RNA-binding protein 40-like isofo... 60 4e-07
ref|XP_006443354.1| hypothetical protein CICLE_v10020067mg [Citr... 60 4e-07
ref|XP_003624600.1| RNA-binding protein [Medicago truncatula] gi... 60 4e-07
ref|XP_006650019.1| PREDICTED: RNA-binding protein 40-like [Oryz... 59 5e-07
ref|XP_006853102.1| hypothetical protein AMTR_s00038p00125360 [A... 59 5e-07
ref|XP_002270244.2| PREDICTED: RNA-binding protein 40-like [Viti... 59 5e-07
ref|NP_001049993.1| Os03g0326600 [Oryza sativa Japonica Group] g... 59 5e-07
gb|EPS65306.1| hypothetical protein M569_09472, partial [Genlise... 59 9e-07
ref|XP_004493140.1| PREDICTED: RNA-binding protein 40-like isofo... 59 9e-07
ref|XP_004493139.1| PREDICTED: RNA-binding protein 40-like isofo... 59 9e-07
ref|XP_006359619.1| PREDICTED: RNA-binding protein 40-like isofo... 57 3e-06
tpg|DAA45145.1| TPA: hypothetical protein ZEAMMB73_529929 [Zea m... 56 4e-06
>ref|XP_002525464.1| RNA binding protein, putative [Ricinus communis]
gi|223535277|gb|EEF36954.1| RNA binding protein,
putative [Ricinus communis]
Length = 450
Score = 62.0 bits (149), Expect = 8e-08
Identities = 29/35 (82%), Positives = 31/35 (88%)
Frame = +3
Query: 102 AKSTLLIRHLPEAIPFDNLSRLFSHYGALSVRPCS 206
A STLLIRHLPEAIP + LSRLFSHYGA SVRPC+
Sbjct: 7 AVSTLLIRHLPEAIPHETLSRLFSHYGATSVRPCA 41
>ref|XP_002319145.2| hypothetical protein POPTR_0013s05120g [Populus trichocarpa]
gi|550325000|gb|EEE95068.2| hypothetical protein
POPTR_0013s05120g [Populus trichocarpa]
Length = 479
Score = 61.2 bits (147), Expect = 1e-07
Identities = 27/33 (81%), Positives = 30/33 (90%)
Frame = +3
Query: 111 TLLIRHLPEAIPFDNLSRLFSHYGALSVRPCSA 209
TLLI+HLPE IPFD LSRLFSHYGA SVRPC++
Sbjct: 37 TLLIKHLPEDIPFDTLSRLFSHYGAFSVRPCNS 69
>ref|XP_002325403.2| RNA recognition motif-containing family protein, partial [Populus
trichocarpa] gi|550316797|gb|EEE99784.2| RNA recognition
motif-containing family protein, partial [Populus
trichocarpa]
Length = 420
Score = 61.2 bits (147), Expect = 1e-07
Identities = 27/33 (81%), Positives = 31/33 (93%)
Frame = +3
Query: 111 TLLIRHLPEAIPFDNLSRLFSHYGALSVRPCSA 209
TLLI+HLPEAIPF LSRLFSHYGA+SVRPC++
Sbjct: 37 TLLIKHLPEAIPFKTLSRLFSHYGAVSVRPCNS 69
>gb|EXB36255.1| RNA-binding protein 40 [Morus notabilis]
Length = 486
Score = 60.5 bits (145), Expect = 2e-07
Identities = 29/36 (80%), Positives = 31/36 (86%)
Frame = +3
Query: 102 AKSTLLIRHLPEAIPFDNLSRLFSHYGALSVRPCSA 209
A STLLIRHLPEAIP LSRLFSHYGA SVRPC++
Sbjct: 35 AASTLLIRHLPEAIPEPTLSRLFSHYGASSVRPCTS 70
>gb|EOY10725.1| RNA-binding family protein isoform 6 [Theobroma cacao]
Length = 436
Score = 60.5 bits (145), Expect = 2e-07
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = +3
Query: 108 STLLIRHLPEAIPFDNLSRLFSHYGALSVRPCSA 209
+TLLIRHLPEAIP D L RLFSHYGA SVRPCS+
Sbjct: 37 TTLLIRHLPEAIPHDTLLRLFSHYGASSVRPCSS 70
>gb|EOY10723.1| RNA-binding family protein isoform 4 [Theobroma cacao]
Length = 487
Score = 60.5 bits (145), Expect = 2e-07
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = +3
Query: 108 STLLIRHLPEAIPFDNLSRLFSHYGALSVRPCSA 209
+TLLIRHLPEAIP D L RLFSHYGA SVRPCS+
Sbjct: 37 TTLLIRHLPEAIPHDTLLRLFSHYGASSVRPCSS 70
>gb|EOY10720.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|508718824|gb|EOY10721.1| RNA-binding family protein
isoform 1 [Theobroma cacao] gi|508718825|gb|EOY10722.1|
RNA-binding family protein isoform 1 [Theobroma cacao]
Length = 479
Score = 60.5 bits (145), Expect = 2e-07
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = +3
Query: 108 STLLIRHLPEAIPFDNLSRLFSHYGALSVRPCSA 209
+TLLIRHLPEAIP D L RLFSHYGA SVRPCS+
Sbjct: 37 TTLLIRHLPEAIPHDTLLRLFSHYGASSVRPCSS 70
>ref|XP_002465331.1| hypothetical protein SORBIDRAFT_01g036600 [Sorghum bicolor]
gi|241919185|gb|EER92329.1| hypothetical protein
SORBIDRAFT_01g036600 [Sorghum bicolor]
Length = 467
Score = 60.5 bits (145), Expect = 2e-07
Identities = 32/62 (51%), Positives = 36/62 (58%)
Frame = +3
Query: 21 PHPNSQHHQQPNEGGXXXXXXXXXXXKAKSTLLIRHLPEAIPFDNLSRLFSHYGALSVRP 200
P P HH Q +G +TLL+RHLPEAI + LSRLFSHYGA SVRP
Sbjct: 23 PPPLHHHHHQQQQG---------PAPPGAATLLVRHLPEAITQEMLSRLFSHYGATSVRP 73
Query: 201 CS 206
CS
Sbjct: 74 CS 75
>ref|XP_006479054.1| PREDICTED: RNA-binding protein 40-like isoform X2 [Citrus sinensis]
Length = 389
Score = 59.7 bits (143), Expect = 4e-07
Identities = 27/33 (81%), Positives = 30/33 (90%)
Frame = +3
Query: 111 TLLIRHLPEAIPFDNLSRLFSHYGALSVRPCSA 209
TLLI+HLP+AIP D LSR+FSHYGA SVRPCSA
Sbjct: 21 TLLIKHLPDAIPQDTLSRIFSHYGASSVRPCSA 53
>ref|XP_006443354.1| hypothetical protein CICLE_v10020067mg [Citrus clementina]
gi|567901734|ref|XP_006443355.1| hypothetical protein
CICLE_v10020067mg [Citrus clementina]
gi|568850729|ref|XP_006479053.1| PREDICTED: RNA-binding
protein 40-like isoform X1 [Citrus sinensis]
gi|557545616|gb|ESR56594.1| hypothetical protein
CICLE_v10020067mg [Citrus clementina]
gi|557545617|gb|ESR56595.1| hypothetical protein
CICLE_v10020067mg [Citrus clementina]
Length = 461
Score = 59.7 bits (143), Expect = 4e-07
Identities = 27/33 (81%), Positives = 30/33 (90%)
Frame = +3
Query: 111 TLLIRHLPEAIPFDNLSRLFSHYGALSVRPCSA 209
TLLI+HLP+AIP D LSR+FSHYGA SVRPCSA
Sbjct: 21 TLLIKHLPDAIPQDTLSRIFSHYGASSVRPCSA 53
>ref|XP_003624600.1| RNA-binding protein [Medicago truncatula]
gi|355499615|gb|AES80818.1| RNA-binding protein
[Medicago truncatula]
Length = 492
Score = 59.7 bits (143), Expect = 4e-07
Identities = 27/37 (72%), Positives = 32/37 (86%)
Frame = +3
Query: 99 KAKSTLLIRHLPEAIPFDNLSRLFSHYGALSVRPCSA 209
++ +TLLI+HLP+AIP D LSRL SHYGA SVRPCSA
Sbjct: 23 ESPATLLIKHLPDAIPHDTLSRLLSHYGASSVRPCSA 59
>ref|XP_006650019.1| PREDICTED: RNA-binding protein 40-like [Oryza brachyantha]
Length = 460
Score = 59.3 bits (142), Expect = 5e-07
Identities = 27/35 (77%), Positives = 31/35 (88%)
Frame = +3
Query: 102 AKSTLLIRHLPEAIPFDNLSRLFSHYGALSVRPCS 206
A +TLL+RHLPEAIP + LSRLFSHYGA SVRPC+
Sbjct: 34 AAATLLVRHLPEAIPQEMLSRLFSHYGATSVRPCA 68
>ref|XP_006853102.1| hypothetical protein AMTR_s00038p00125360 [Amborella trichopoda]
gi|548856741|gb|ERN14569.1| hypothetical protein
AMTR_s00038p00125360 [Amborella trichopoda]
Length = 471
Score = 59.3 bits (142), Expect = 5e-07
Identities = 26/33 (78%), Positives = 30/33 (90%)
Frame = +3
Query: 108 STLLIRHLPEAIPFDNLSRLFSHYGALSVRPCS 206
+TLL+RHLPEAIP + LSRLFSHYGA SVRPC+
Sbjct: 26 ATLLVRHLPEAIPHETLSRLFSHYGASSVRPCA 58
>ref|XP_002270244.2| PREDICTED: RNA-binding protein 40-like [Vitis vinifera]
gi|298205172|emb|CBI17231.3| unnamed protein product
[Vitis vinifera]
Length = 463
Score = 59.3 bits (142), Expect = 5e-07
Identities = 28/37 (75%), Positives = 32/37 (86%)
Frame = +3
Query: 99 KAKSTLLIRHLPEAIPFDNLSRLFSHYGALSVRPCSA 209
K+ +TLLIRHLPEAIP D LSRLFS YGA SVRPC++
Sbjct: 18 KSAATLLIRHLPEAIPQDTLSRLFSSYGASSVRPCTS 54
>ref|NP_001049993.1| Os03g0326600 [Oryza sativa Japonica Group]
gi|108707928|gb|ABF95723.1| RNA recognition motif family
protein, expressed [Oryza sativa Japonica Group]
gi|113548464|dbj|BAF11907.1| Os03g0326600 [Oryza sativa
Japonica Group] gi|218192743|gb|EEC75170.1| hypothetical
protein OsI_11395 [Oryza sativa Indica Group]
Length = 467
Score = 59.3 bits (142), Expect = 5e-07
Identities = 32/62 (51%), Positives = 36/62 (58%)
Frame = +3
Query: 21 PHPNSQHHQQPNEGGXXXXXXXXXXXKAKSTLLIRHLPEAIPFDNLSRLFSHYGALSVRP 200
P P Q QQP +TLL+RHLPEAIP + LSRLFSHYGA SVRP
Sbjct: 25 PPPPQQQQQQPPGSAPPA-----------ATLLVRHLPEAIPQEMLSRLFSHYGATSVRP 73
Query: 201 CS 206
C+
Sbjct: 74 CA 75
>gb|EPS65306.1| hypothetical protein M569_09472, partial [Genlisea aurea]
Length = 433
Score = 58.5 bits (140), Expect = 9e-07
Identities = 26/32 (81%), Positives = 29/32 (90%)
Frame = +3
Query: 111 TLLIRHLPEAIPFDNLSRLFSHYGALSVRPCS 206
TLL+RHLPEAIPF+ L+RLFSHYGA SVR CS
Sbjct: 10 TLLVRHLPEAIPFETLTRLFSHYGAASVRHCS 41
>ref|XP_004493140.1| PREDICTED: RNA-binding protein 40-like isoform X2 [Cicer arietinum]
Length = 439
Score = 58.5 bits (140), Expect = 9e-07
Identities = 26/36 (72%), Positives = 31/36 (86%)
Frame = +3
Query: 99 KAKSTLLIRHLPEAIPFDNLSRLFSHYGALSVRPCS 206
++ +TLLI+HLP+AIP D LSRL SHYGA SVRPCS
Sbjct: 23 ESSATLLIKHLPDAIPHDTLSRLLSHYGASSVRPCS 58
>ref|XP_004493139.1| PREDICTED: RNA-binding protein 40-like isoform X1 [Cicer arietinum]
Length = 459
Score = 58.5 bits (140), Expect = 9e-07
Identities = 26/36 (72%), Positives = 31/36 (86%)
Frame = +3
Query: 99 KAKSTLLIRHLPEAIPFDNLSRLFSHYGALSVRPCS 206
++ +TLLI+HLP+AIP D LSRL SHYGA SVRPCS
Sbjct: 23 ESSATLLIKHLPDAIPHDTLSRLLSHYGASSVRPCS 58
>ref|XP_006359619.1| PREDICTED: RNA-binding protein 40-like isoform X1 [Solanum
tuberosum] gi|565387688|ref|XP_006359620.1| PREDICTED:
RNA-binding protein 40-like isoform X2 [Solanum
tuberosum] gi|565387690|ref|XP_006359621.1| PREDICTED:
RNA-binding protein 40-like isoform X3 [Solanum
tuberosum] gi|565387692|ref|XP_006359622.1| PREDICTED:
RNA-binding protein 40-like isoform X4 [Solanum
tuberosum] gi|565387694|ref|XP_006359623.1| PREDICTED:
RNA-binding protein 40-like isoform X5 [Solanum
tuberosum] gi|565387696|ref|XP_006359624.1| PREDICTED:
RNA-binding protein 40-like isoform X6 [Solanum
tuberosum]
Length = 452
Score = 56.6 bits (135), Expect = 3e-06
Identities = 25/35 (71%), Positives = 31/35 (88%)
Frame = +3
Query: 105 KSTLLIRHLPEAIPFDNLSRLFSHYGALSVRPCSA 209
+STLLIRHLPEAIP + LSRL S+YGA S+RPC++
Sbjct: 23 ESTLLIRHLPEAIPHETLSRLLSNYGATSIRPCTS 57
>tpg|DAA45145.1| TPA: hypothetical protein ZEAMMB73_529929 [Zea mays]
Length = 396
Score = 56.2 bits (134), Expect = 4e-06
Identities = 26/33 (78%), Positives = 29/33 (87%)
Frame = +3
Query: 108 STLLIRHLPEAIPFDNLSRLFSHYGALSVRPCS 206
+TLL+RHLPEAI + LSRLFSHYGA SVRPCS
Sbjct: 26 ATLLVRHLPEAITQEMLSRLFSHYGATSVRPCS 58