BLASTX nr result
ID: Achyranthes23_contig00033808
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Achyranthes23_contig00033808
(318 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004508402.1| PREDICTED: 116 kDa U5 small nuclear ribonucl... 86 4e-15
ref|XP_004242711.1| PREDICTED: 116 kDa U5 small nuclear ribonucl... 83 3e-14
ref|XP_006359523.1| PREDICTED: 116 kDa U5 small nuclear ribonucl... 83 4e-14
gb|EOY33420.1| Ribosomal protein S5/Elongation factor G/III/V fa... 82 7e-14
gb|EMJ18344.1| hypothetical protein PRUPE_ppa000830mg [Prunus pe... 80 2e-13
ref|XP_003609507.1| 116 kDa U5 small nuclear ribonucleoprotein c... 80 2e-13
ref|XP_004139267.1| PREDICTED: 116 kDa U5 small nuclear ribonucl... 80 4e-13
ref|XP_002532501.1| 116 kD U5 small nuclear ribonucleoprotein co... 79 6e-13
gb|EPS62854.1| hypothetical protein M569_11934 [Genlisea aurea] 78 1e-12
ref|XP_002267199.1| PREDICTED: 116 kDa U5 small nuclear ribonucl... 77 2e-12
ref|XP_006453715.1| hypothetical protein CICLE_v10007342mg [Citr... 76 4e-12
ref|XP_006473937.1| PREDICTED: 116 kDa U5 small nuclear ribonucl... 75 7e-12
ref|XP_004307073.1| PREDICTED: 116 kDa U5 small nuclear ribonucl... 75 7e-12
ref|XP_002889592.1| hypothetical protein ARALYDRAFT_470642 [Arab... 75 7e-12
ref|XP_002309312.2| elongation factor Tu family protein [Populus... 75 1e-11
ref|NP_172112.1| splicing factor Snu114-like protein GFA1 [Arabi... 75 1e-11
ref|XP_003549705.1| PREDICTED: 116 kDa U5 small nuclear ribonucl... 75 1e-11
dbj|BAE98631.1| elongation factor like protein [Arabidopsis thal... 75 1e-11
ref|XP_006286996.1| hypothetical protein CARUB_v10000141mg [Caps... 74 2e-11
ref|XP_006417944.1| hypothetical protein EUTSA_v10006688mg [Eutr... 74 2e-11
>ref|XP_004508402.1| PREDICTED: 116 kDa U5 small nuclear ribonucleoprotein
component-like [Cicer arietinum]
Length = 990
Score = 86.3 bits (212), Expect = 4e-15
Identities = 48/89 (53%), Positives = 55/89 (61%), Gaps = 4/89 (4%)
Frame = -3
Query: 256 MDDSLYDEFGNYIGPDIDSDQDNSSEVPSXXXXXXXXXXXXDTS----PATTNGWIATKT 89
MDDSLYDEFGNYIGP+I+SDQD+ E + A TNGW+ T +
Sbjct: 1 MDDSLYDEFGNYIGPEIESDQDSDREEEDDDDHDDPNEQHDTAADSDGEAATNGWLTTGS 60
Query: 88 TANSXXXXDMVDNQVVLAEDKKYYPTAEE 2
T DM+DNQVVLAEDKKYYPTAEE
Sbjct: 61 T-----DVDMLDNQVVLAEDKKYYPTAEE 84
>ref|XP_004242711.1| PREDICTED: 116 kDa U5 small nuclear ribonucleoprotein
component-like [Solanum lycopersicum]
Length = 987
Score = 83.2 bits (204), Expect = 3e-14
Identities = 44/88 (50%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Frame = -3
Query: 256 MDDSLYDEFGNYIGPDIDSDQDNSSEVPSXXXXXXXXXXXXDT---SPATTNGWIATKTT 86
MDDSLYDEFGNYIGP+I+SDQ++ E + P +NGW+AT+
Sbjct: 1 MDDSLYDEFGNYIGPEIESDQESDREEEDDELPDRSDDERAVSDDEQPGASNGWLATQDD 60
Query: 85 ANSXXXXDMVDNQVVLAEDKKYYPTAEE 2
+ +DNQVVLAEDKKYYPTAEE
Sbjct: 61 ID-------MDNQVVLAEDKKYYPTAEE 81
>ref|XP_006359523.1| PREDICTED: 116 kDa U5 small nuclear ribonucleoprotein
component-like isoform X1 [Solanum tuberosum]
gi|565387474|ref|XP_006359524.1| PREDICTED: 116 kDa U5
small nuclear ribonucleoprotein component-like isoform
X2 [Solanum tuberosum]
Length = 987
Score = 82.8 bits (203), Expect = 4e-14
Identities = 43/88 (48%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Frame = -3
Query: 256 MDDSLYDEFGNYIGPDIDSDQDNSSEVPSXXXXXXXXXXXXDT---SPATTNGWIATKTT 86
MDDSLYDEFGNYIGP+I+SDQ++ E + P +NGW+AT+
Sbjct: 1 MDDSLYDEFGNYIGPEIESDQESDREEEDDELPDRSDDERVASDGEQPGASNGWLATQDD 60
Query: 85 ANSXXXXDMVDNQVVLAEDKKYYPTAEE 2
+ +DNQV+LAEDKKYYPTAEE
Sbjct: 61 ID-------MDNQVILAEDKKYYPTAEE 81
>gb|EOY33420.1| Ribosomal protein S5/Elongation factor G/III/V family protein
[Theobroma cacao]
Length = 990
Score = 82.0 bits (201), Expect = 7e-14
Identities = 45/91 (49%), Positives = 54/91 (59%), Gaps = 6/91 (6%)
Frame = -3
Query: 256 MDDSLYDEFGNYIGPDIDSDQDN------SSEVPSXXXXXXXXXXXXDTSPATTNGWIAT 95
MDD+LYDEFGNYIGP+I+SDQ++ E P + P +NGWI
Sbjct: 1 MDDNLYDEFGNYIGPEIESDQESEGEEEEEEEFPDRHAQEEGEESDGEAPPGASNGWI-- 58
Query: 94 KTTANSXXXXDMVDNQVVLAEDKKYYPTAEE 2
T AN +DNQ+VLAEDKKYYPTAEE
Sbjct: 59 -TAANDVD----MDNQIVLAEDKKYYPTAEE 84
>gb|EMJ18344.1| hypothetical protein PRUPE_ppa000830mg [Prunus persica]
Length = 988
Score = 80.5 bits (197), Expect = 2e-13
Identities = 48/90 (53%), Positives = 56/90 (62%), Gaps = 5/90 (5%)
Frame = -3
Query: 256 MDDSLYDEFGNYIGPDIDSDQ-----DNSSEVPSXXXXXXXXXXXXDTSPATTNGWIATK 92
MDDSLYDEFGNYIGP+I+SDQ D E+P D + A +NGW+A
Sbjct: 1 MDDSLYDEFGNYIGPEIESDQESDREDEDGELPD--RQDDGAASDGDDAAAASNGWLA-- 56
Query: 91 TTANSXXXXDMVDNQVVLAEDKKYYPTAEE 2
T+N +DNQVVLAEDKKYYPTAEE
Sbjct: 57 ATSNDVD----MDNQVVLAEDKKYYPTAEE 82
>ref|XP_003609507.1| 116 kDa U5 small nuclear ribonucleoprotein component [Medicago
truncatula] gi|355510562|gb|AES91704.1| 116 kDa U5 small
nuclear ribonucleoprotein component [Medicago
truncatula]
Length = 983
Score = 80.5 bits (197), Expect = 2e-13
Identities = 44/87 (50%), Positives = 53/87 (60%), Gaps = 2/87 (2%)
Frame = -3
Query: 256 MDDSLYDEFGNYIGPDIDSDQDNSSEVPSXXXXXXXXXXXXDTS--PATTNGWIATKTTA 83
MDDSLYDEFGNYIGP+I+SD D+ + PS S +NGW+ T T
Sbjct: 1 MDDSLYDEFGNYIGPEIESDLDSDGDDPSDRDEPNEEDDRAAQSDGEGPSNGWLTTTT-- 58
Query: 82 NSXXXXDMVDNQVVLAEDKKYYPTAEE 2
D ++NQ+VLAEDKKYYPTAEE
Sbjct: 59 ---DDMDTLENQIVLAEDKKYYPTAEE 82
>ref|XP_004139267.1| PREDICTED: 116 kDa U5 small nuclear ribonucleoprotein
component-like [Cucumis sativus]
gi|449493675|ref|XP_004159406.1| PREDICTED: 116 kDa U5
small nuclear ribonucleoprotein component-like [Cucumis
sativus]
Length = 988
Score = 79.7 bits (195), Expect = 4e-13
Identities = 43/89 (48%), Positives = 52/89 (58%), Gaps = 4/89 (4%)
Frame = -3
Query: 256 MDDSLYDEFGNYIGPDIDSDQDNSSEVPSXXXXXXXXXXXXDT----SPATTNGWIATKT 89
MDDSLYDEFGNYIGP+IDSD+D+ E + + +NGWI T
Sbjct: 1 MDDSLYDEFGNYIGPEIDSDKDSDIEDEDENLMEKPEEDEGVSDGEDAGGASNGWITTSN 60
Query: 88 TANSXXXXDMVDNQVVLAEDKKYYPTAEE 2
+ +DNQ+VLAEDKKYYPTAEE
Sbjct: 61 DVD-------MDNQIVLAEDKKYYPTAEE 82
>ref|XP_002532501.1| 116 kD U5 small nuclear ribonucleoprotein component, putative
[Ricinus communis] gi|223527776|gb|EEF29877.1| 116 kD U5
small nuclear ribonucleoprotein component, putative
[Ricinus communis]
Length = 992
Score = 79.0 bits (193), Expect = 6e-13
Identities = 45/91 (49%), Positives = 56/91 (61%), Gaps = 6/91 (6%)
Frame = -3
Query: 256 MDDSLYDEFGNYIGPDIDSDQDNSSE------VPSXXXXXXXXXXXXDTSPATTNGWIAT 95
MDD+LYDEFGNYIGP+I+SDQD+ E +P D +NGW+
Sbjct: 1 MDDNLYDEFGNYIGPEIESDQDSDREEEEDEDLPEKPHEDHDMVSDGDEEINGSNGWL-- 58
Query: 94 KTTANSXXXXDMVDNQVVLAEDKKYYPTAEE 2
TT+N+ +DNQ+VLAEDKKYYPTAEE
Sbjct: 59 -TTSNNDVD---MDNQIVLAEDKKYYPTAEE 85
>gb|EPS62854.1| hypothetical protein M569_11934 [Genlisea aurea]
Length = 790
Score = 77.8 bits (190), Expect = 1e-12
Identities = 40/89 (44%), Positives = 51/89 (57%), Gaps = 4/89 (4%)
Frame = -3
Query: 256 MDDSLYDEFGNYIGPDIDSDQDNSSEVPSXXXXXXXXXXXXDT----SPATTNGWIATKT 89
MDD+LYDEFGNYIGP+I+SDQ++ E + P NGW+ T
Sbjct: 1 MDDNLYDEFGNYIGPEIESDQESDREEEEEELPERTEDEDPMSDEERGPGKPNGWLTTTE 60
Query: 88 TANSXXXXDMVDNQVVLAEDKKYYPTAEE 2
+ +DNQ++LAEDKKYYPTAEE
Sbjct: 61 DVD-------MDNQIILAEDKKYYPTAEE 82
>ref|XP_002267199.1| PREDICTED: 116 kDa U5 small nuclear ribonucleoprotein component
[Vitis vinifera] gi|147858113|emb|CAN81413.1|
hypothetical protein VITISV_031170 [Vitis vinifera]
Length = 988
Score = 77.0 bits (188), Expect = 2e-12
Identities = 42/90 (46%), Positives = 53/90 (58%), Gaps = 5/90 (5%)
Frame = -3
Query: 256 MDDSLYDEFGNYIGPDIDSDQ-----DNSSEVPSXXXXXXXXXXXXDTSPATTNGWIATK 92
MDDSLYDEFGNYIGP+I+SD+ D ++P + + A +NGWI
Sbjct: 1 MDDSLYDEFGNYIGPEIESDRESDGDDQDEDIPD-KPDEEEMVSDVEDAVAASNGWITAS 59
Query: 91 TTANSXXXXDMVDNQVVLAEDKKYYPTAEE 2
+ +DNQ+VLAEDKKYYPTAEE
Sbjct: 60 NDVD-------MDNQIVLAEDKKYYPTAEE 82
>ref|XP_006453715.1| hypothetical protein CICLE_v10007342mg [Citrus clementina]
gi|557556941|gb|ESR66955.1| hypothetical protein
CICLE_v10007342mg [Citrus clementina]
Length = 989
Score = 76.3 bits (186), Expect = 4e-12
Identities = 42/91 (46%), Positives = 52/91 (57%), Gaps = 6/91 (6%)
Frame = -3
Query: 256 MDDSLYDEFGNYIGPDIDSDQ------DNSSEVPSXXXXXXXXXXXXDTSPATTNGWIAT 95
MDDSLYDEFGNYIGP+I+SD+ D ++P + A +NGWI
Sbjct: 1 MDDSLYDEFGNYIGPEIESDRESEADDDEDEDLPDKADEDGHASDREVAATA-SNGWITA 59
Query: 94 KTTANSXXXXDMVDNQVVLAEDKKYYPTAEE 2
+ +DNQ+VLAEDKKYYPTAEE
Sbjct: 60 SNDVD-------MDNQIVLAEDKKYYPTAEE 83
>ref|XP_006473937.1| PREDICTED: 116 kDa U5 small nuclear ribonucleoprotein
component-like [Citrus sinensis]
Length = 989
Score = 75.5 bits (184), Expect = 7e-12
Identities = 41/90 (45%), Positives = 51/90 (56%), Gaps = 5/90 (5%)
Frame = -3
Query: 256 MDDSLYDEFGNYIGPDIDSDQ-----DNSSEVPSXXXXXXXXXXXXDTSPATTNGWIATK 92
MDDSLYDEFGNYIGP+I+SD+ D+ E + + A NGW+
Sbjct: 1 MDDSLYDEFGNYIGPEIESDRESEADDDEDEDLPDKADEDGHASDREVAAAAFNGWVTAS 60
Query: 91 TTANSXXXXDMVDNQVVLAEDKKYYPTAEE 2
+ +DNQ+VLAEDKKYYPTAEE
Sbjct: 61 NDVD-------MDNQIVLAEDKKYYPTAEE 83
>ref|XP_004307073.1| PREDICTED: 116 kDa U5 small nuclear ribonucleoprotein
component-like [Fragaria vesca subsp. vesca]
Length = 985
Score = 75.5 bits (184), Expect = 7e-12
Identities = 40/86 (46%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Frame = -3
Query: 256 MDDSLYDEFGNYIGPDIDSDQDNSSEVPSXXXXXXXXXXXXDT-SPATTNGWIATKTTAN 80
MDDSLYDEFGNYIGP+I+SDQ++ E + NGW+ +
Sbjct: 1 MDDSLYDEFGNYIGPEIESDQESEREEEDEELPDRTDDRGAASDGDDAPNGWMTASNDVD 60
Query: 79 SXXXXDMVDNQVVLAEDKKYYPTAEE 2
+DNQ+VLAEDKKYYPTAEE
Sbjct: 61 -------MDNQIVLAEDKKYYPTAEE 79
>ref|XP_002889592.1| hypothetical protein ARALYDRAFT_470642 [Arabidopsis lyrata subsp.
lyrata] gi|297335434|gb|EFH65851.1| hypothetical protein
ARALYDRAFT_470642 [Arabidopsis lyrata subsp. lyrata]
Length = 987
Score = 75.5 bits (184), Expect = 7e-12
Identities = 41/88 (46%), Positives = 52/88 (59%), Gaps = 3/88 (3%)
Frame = -3
Query: 256 MDDSLYDEFGNYIGPDIDSDQDNSSEVPSXXXXXXXXXXXXDT---SPATTNGWIATKTT 86
M++SLYDEFGNYIGP+I+SD+D+ E+ P +NGWI TT
Sbjct: 1 MEESLYDEFGNYIGPEIESDRDSDDEIEDENLQDKQLEENGSDGEHGPGGSNGWI---TT 57
Query: 85 ANSXXXXDMVDNQVVLAEDKKYYPTAEE 2
N ++NQ+VL EDKKYYPTAEE
Sbjct: 58 INDVE----MENQIVLPEDKKYYPTAEE 81
>ref|XP_002309312.2| elongation factor Tu family protein [Populus trichocarpa]
gi|550336725|gb|EEE92835.2| elongation factor Tu family
protein [Populus trichocarpa]
Length = 969
Score = 74.7 bits (182), Expect = 1e-11
Identities = 40/89 (44%), Positives = 53/89 (59%), Gaps = 4/89 (4%)
Frame = -3
Query: 256 MDDSLYDEFGNYIGPDIDSDQDNSSEVPSXXXXXXXXXXXXDT----SPATTNGWIATKT 89
MDD+LYDEFGNYIGP+I+SD+++ E ++ + +NGW+A
Sbjct: 1 MDDNLYDEFGNYIGPEIESDRESDGEEEDEELPDKPHEDEEESDGEDAVHASNGWLAASD 60
Query: 88 TANSXXXXDMVDNQVVLAEDKKYYPTAEE 2
+ +DNQVVLAEDKKYYPTAEE
Sbjct: 61 DVD-------MDNQVVLAEDKKYYPTAEE 82
>ref|NP_172112.1| splicing factor Snu114-like protein GFA1 [Arabidopsis thaliana]
gi|30679607|ref|NP_849600.1| splicing factor Snu114-like
protein GFA1 [Arabidopsis thaliana]
gi|8844127|gb|AAF80219.1|AC025290_8 Contains similarity
to an U5 snRNP-specific protein 116 kD from Homo sapiens
gi|4759280 and contains elongation factor G C-terminus
PF|00679 and is a member of the elongation factor Tu
family PF|00009 [Arabidopsis thaliana]
gi|110741512|dbj|BAE98706.1| elongation factor like
protein [Arabidopsis thaliana]
gi|332189840|gb|AEE27961.1| splicing factor Snu114-like
protein GFA1 [Arabidopsis thaliana]
gi|332189841|gb|AEE27962.1| splicing factor Snu114-like
protein GFA1 [Arabidopsis thaliana]
Length = 987
Score = 74.7 bits (182), Expect = 1e-11
Identities = 41/88 (46%), Positives = 52/88 (59%), Gaps = 3/88 (3%)
Frame = -3
Query: 256 MDDSLYDEFGNYIGPDIDSDQDNSSEVPS---XXXXXXXXXXXXDTSPATTNGWIATKTT 86
M+ SLYDEFGNY+GP+I+SD+D+ EV + P +NGWI TT
Sbjct: 1 MESSLYDEFGNYVGPEIESDRDSDDEVEDEDLQDKHLEENGSDGEQGPGGSNGWI---TT 57
Query: 85 ANSXXXXDMVDNQVVLAEDKKYYPTAEE 2
N ++NQ+VL EDKKYYPTAEE
Sbjct: 58 INDVE----MENQIVLPEDKKYYPTAEE 81
>ref|XP_003549705.1| PREDICTED: 116 kDa U5 small nuclear ribonucleoprotein
component-like [Glycine max]
Length = 988
Score = 74.7 bits (182), Expect = 1e-11
Identities = 43/92 (46%), Positives = 53/92 (57%), Gaps = 7/92 (7%)
Frame = -3
Query: 256 MDDSLYDEFGNYIGPDIDSDQD-------NSSEVPSXXXXXXXXXXXXDTSPATTNGWIA 98
MDDSLYDEFGNYIGP+I+SDQD ++ + P P +NGW+
Sbjct: 1 MDDSLYDEFGNYIGPEIESDQDSDRDSDADADDNPDDQSDGGGTAHSDGEGP--SNGWMT 58
Query: 97 TKTTANSXXXXDMVDNQVVLAEDKKYYPTAEE 2
T + ++NQVVLAEDKKYYPTAEE
Sbjct: 59 TISDE--------LENQVVLAEDKKYYPTAEE 82
>dbj|BAE98631.1| elongation factor like protein [Arabidopsis thaliana]
Length = 693
Score = 74.7 bits (182), Expect = 1e-11
Identities = 41/88 (46%), Positives = 52/88 (59%), Gaps = 3/88 (3%)
Frame = -3
Query: 256 MDDSLYDEFGNYIGPDIDSDQDNSSEVPS---XXXXXXXXXXXXDTSPATTNGWIATKTT 86
M+ SLYDEFGNY+GP+I+SD+D+ EV + P +NGWI TT
Sbjct: 1 MESSLYDEFGNYVGPEIESDRDSDDEVEDEDLQDKHLEENGSDGEQGPGGSNGWI---TT 57
Query: 85 ANSXXXXDMVDNQVVLAEDKKYYPTAEE 2
N ++NQ+VL EDKKYYPTAEE
Sbjct: 58 INDVE----MENQIVLPEDKKYYPTAEE 81
>ref|XP_006286996.1| hypothetical protein CARUB_v10000141mg [Capsella rubella]
gi|565457995|ref|XP_006286997.1| hypothetical protein
CARUB_v10000141mg [Capsella rubella]
gi|482555702|gb|EOA19894.1| hypothetical protein
CARUB_v10000141mg [Capsella rubella]
gi|482555703|gb|EOA19895.1| hypothetical protein
CARUB_v10000141mg [Capsella rubella]
Length = 985
Score = 74.3 bits (181), Expect = 2e-11
Identities = 42/86 (48%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Frame = -3
Query: 256 MDDSLYDEFGNYIGPDIDSDQDNSSEVPSXXXXXXXXXXXXDT-SPATTNGWIATKTTAN 80
MDDSLYDEFGNYIGP+I+SD+++ EV NGWI TT N
Sbjct: 1 MDDSLYDEFGNYIGPEIESDRESDDEVEEDEDNQPEENGHGSDGEQGGPNGWI---TTIN 57
Query: 79 SXXXXDMVDNQVVLAEDKKYYPTAEE 2
++NQ+VL EDKKYYPTAEE
Sbjct: 58 DVE----MENQIVLPEDKKYYPTAEE 79
>ref|XP_006417944.1| hypothetical protein EUTSA_v10006688mg [Eutrema salsugineum]
gi|557095715|gb|ESQ36297.1| hypothetical protein
EUTSA_v10006688mg [Eutrema salsugineum]
Length = 987
Score = 73.9 bits (180), Expect = 2e-11
Identities = 41/88 (46%), Positives = 51/88 (57%), Gaps = 3/88 (3%)
Frame = -3
Query: 256 MDDSLYDEFGNYIGPDIDSDQDNSSEVPSXXXXXXXXXXXXDTSP---ATTNGWIATKTT 86
MDDSLYDEFGNYIGP+I+SD+++ E+ +NGWI TT
Sbjct: 1 MDDSLYDEFGNYIGPEIESDRESDDEIQDEELQDNQPEEDGSDGEHGHGGSNGWI---TT 57
Query: 85 ANSXXXXDMVDNQVVLAEDKKYYPTAEE 2
N ++NQ+VL EDKKYYPTAEE
Sbjct: 58 INDVE----MENQIVLPEDKKYYPTAEE 81