BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00033604
         (911 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s...   523   e-146
emb|CBI16226.3| unnamed protein product [Vitis vinifera]              519   e-145
gb|EOY20721.1| DNA-directed RNA polymerase [Theobroma cacao]          493   e-137
ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III s...   493   e-137
ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III s...   488   e-135
ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s...   488   e-135
ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III s...   486   e-135
ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III s...   486   e-135
ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III s...   481   e-133
ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citr...   481   e-133
gb|EMJ09344.1| hypothetical protein PRUPE_ppa024521mg, partial [...   481   e-133
ref|XP_006279465.1| hypothetical protein CARUB_v10025743mg [Caps...   478   e-132
ref|XP_002864665.1| hypothetical protein ARALYDRAFT_496142 [Arab...   478   e-132
gb|ESW04135.1| hypothetical protein PHAVU_011G070100g [Phaseolus...   477   e-132
ref|XP_004505924.1| PREDICTED: DNA-directed RNA polymerase III s...   476   e-132
ref|XP_004505923.1| PREDICTED: DNA-directed RNA polymerase III s...   476   e-132
ref|XP_004169848.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   476   e-132
dbj|BAA96933.1| DNA-directed RNA polymerase II largest chain [Ar...   474   e-131
ref|NP_001190573.1| nuclear RNA polymerase C1 [Arabidopsis thali...   474   e-131
ref|NP_200812.2| nuclear RNA polymerase C1 [Arabidopsis thaliana...   474   e-131

>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
            vinifera]
          Length = 1383

 Score =  523 bits (1347), Expect = e-146
 Identities = 250/303 (82%), Positives = 273/303 (90%)
 Frame = -1

Query: 911  QANACLHQGLQEPSNSSKLLDDWDYLQVEVAQYINSDVRVALQAQQPTKPLSGFVQRLKG 732
            QANA LHQ LQ+  ++SK L  WDYLQ+EVAQYINSDVR    A Q  +PLSGFVQRLKG
Sbjct: 287  QANASLHQELQDTGSTSKCLAGWDYLQIEVAQYINSDVRGVPLAMQAARPLSGFVQRLKG 346

Query: 731  KQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAVPLLMASILTYPESVNHHNIEKLRQC 552
            KQGRFRGNLSGKRVE+TGRTVISPDPNLKITEVA+P+LMA IL+YPE V+HHNIEKLRQC
Sbjct: 347  KQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAKILSYPERVSHHNIEKLRQC 406

Query: 551  VRNGPKKYPGAKFVIEPNGDKKDLSFPGRKRIADELKFGYIVHRHLEDGDVVLFNRQPSL 372
            + NGP KYPGAK +  P+G  + L F GRKR ADELK+GYIV RHLEDGDVVLFNRQPSL
Sbjct: 407  ILNGPFKYPGAKLIRYPDGSMRSLMFSGRKRFADELKYGYIVERHLEDGDVVLFNRQPSL 466

Query: 371  HRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNN 192
            HRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAL+LMGVQNN
Sbjct: 467  HRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNN 526

Query: 191  LCTPKNGAILVASTQDFLTSSFLITRKDTFYDRATFSLMCSYMGDGMEIIDMPTPAVLKP 12
            LCTPKNG ILVASTQDFLTSSFLITRKDTFYDRA FSLMCSYMGDGM+++D+PTPA++KP
Sbjct: 527  LCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPAIIKP 586

Query: 11   IEL 3
            +EL
Sbjct: 587  VEL 589


>emb|CBI16226.3| unnamed protein product [Vitis vinifera]
          Length = 1819

 Score =  519 bits (1337), Expect = e-145
 Identities = 249/303 (82%), Positives = 272/303 (89%)
 Frame = -1

Query: 911  QANACLHQGLQEPSNSSKLLDDWDYLQVEVAQYINSDVRVALQAQQPTKPLSGFVQRLKG 732
            QANA LHQ LQ+  ++SK L  WDYLQ+EVAQYINSDVR    A Q  +PLSGFVQRLKG
Sbjct: 287  QANASLHQELQDTGSTSKCLAGWDYLQIEVAQYINSDVRGVPLAMQAARPLSGFVQRLKG 346

Query: 731  KQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAVPLLMASILTYPESVNHHNIEKLRQC 552
            KQGRFRGNLSGKRVE+TGRTVISPDPNLKITEVA+P+LMA IL+YPE V+HHNIEKLRQC
Sbjct: 347  KQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAKILSYPERVSHHNIEKLRQC 406

Query: 551  VRNGPKKYPGAKFVIEPNGDKKDLSFPGRKRIADELKFGYIVHRHLEDGDVVLFNRQPSL 372
            + NGP KYPGAK +  P+G  + L F GRKR ADELK+GYIV RHLEDGDVVLFNRQPSL
Sbjct: 407  ILNGPFKYPGAKLIRYPDGSMRSLMFSGRKRFADELKYGYIVERHLEDGDVVLFNRQPSL 466

Query: 371  HRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNN 192
            HRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAL+LMGVQNN
Sbjct: 467  HRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNN 526

Query: 191  LCTPKNGAILVASTQDFLTSSFLITRKDTFYDRATFSLMCSYMGDGMEIIDMPTPAVLKP 12
            LCTPKNG ILVASTQDFLTSSFLITRKDTFYDRA FSLMCSYMGDGM+++D+PTPA++K 
Sbjct: 527  LCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPAIIKA 586

Query: 11   IEL 3
            +EL
Sbjct: 587  MEL 589


>gb|EOY20721.1| DNA-directed RNA polymerase [Theobroma cacao]
          Length = 1395

 Score =  493 bits (1269), Expect = e-137
 Identities = 243/303 (80%), Positives = 266/303 (87%)
 Frame = -1

Query: 911  QANACLHQGLQEPSNSSKLLDDWDYLQVEVAQYINSDVRVALQAQQPTKPLSGFVQRLKG 732
            QANA L Q L E + + K L  W+ LQVEVAQYINSDVR    + Q +KPLSGFVQR+KG
Sbjct: 284  QANASLRQELVETNAAFKCLGGWEMLQVEVAQYINSDVRGVPFSMQVSKPLSGFVQRIKG 343

Query: 731  KQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAVPLLMASILTYPESVNHHNIEKLRQC 552
            K GRFRGNLSGKRVE+TGRTVISPDPNLKITEVA+P+ MA ILTYPE V++HNIEKLRQC
Sbjct: 344  KHGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPIHMARILTYPERVSNHNIEKLRQC 403

Query: 551  VRNGPKKYPGAKFVIEPNGDKKDLSFPGRKRIADELKFGYIVHRHLEDGDVVLFNRQPSL 372
            VRNGP KYPGA+ V  P+G  + L    RKR+ADELKFG +V RHLEDGD+VLFNRQPSL
Sbjct: 404  VRNGPSKYPGARMVRYPDGSARLLIGDYRKRLADELKFGCVVDRHLEDGDIVLFNRQPSL 463

Query: 371  HRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNN 192
            HRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAL+LMGVQNN
Sbjct: 464  HRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNN 523

Query: 191  LCTPKNGAILVASTQDFLTSSFLITRKDTFYDRATFSLMCSYMGDGMEIIDMPTPAVLKP 12
            LCTPKNG ILVASTQDFLTSSFLITRKD FYDRA FSL+CSYMGDGM++ID+PTPA+LKP
Sbjct: 524  LCTPKNGEILVASTQDFLTSSFLITRKDIFYDRAAFSLICSYMGDGMDLIDLPTPALLKP 583

Query: 11   IEL 3
            IEL
Sbjct: 584  IEL 586


>ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Solanum
            lycopersicum]
          Length = 1390

 Score =  493 bits (1268), Expect = e-137
 Identities = 241/303 (79%), Positives = 266/303 (87%)
 Frame = -1

Query: 911  QANACLHQGLQEPSNSSKLLDDWDYLQVEVAQYINSDVRVALQAQQPTKPLSGFVQRLKG 732
            QANA LHQ + + S+  K L+ W  LQ+EVAQYINSDVR      QP +PLSGF QRLKG
Sbjct: 285  QANASLHQEMSD-SSPVKSLNQWIDLQMEVAQYINSDVRGVPLQMQPPRPLSGFTQRLKG 343

Query: 731  KQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAVPLLMASILTYPESVNHHNIEKLRQC 552
            KQGRFRGNLSGKRVE+TGRTVISPDPNLKITEVA+P+LMA ILTYPE V+ HNIEKLRQC
Sbjct: 344  KQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAQILTYPERVSQHNIEKLRQC 403

Query: 551  VRNGPKKYPGAKFVIEPNGDKKDLSFPGRKRIADELKFGYIVHRHLEDGDVVLFNRQPSL 372
            VRNGP KYPGAKF+  P+G++  L F  RKR ADELKFGYIV RHLEDGD+VLFNRQPSL
Sbjct: 404  VRNGPNKYPGAKFIRHPDGNEMSLMFSSRKRYADELKFGYIVDRHLEDGDIVLFNRQPSL 463

Query: 371  HRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNN 192
            HRMSIM HRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAL+LMGVQNN
Sbjct: 464  HRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNN 523

Query: 191  LCTPKNGAILVASTQDFLTSSFLITRKDTFYDRATFSLMCSYMGDGMEIIDMPTPAVLKP 12
            LCTPK+G ILVASTQDFLTSSFLITRKDTFY+RA+FSL+CSYMGD M+  D+P+PA +KP
Sbjct: 524  LCTPKSGEILVASTQDFLTSSFLITRKDTFYNRASFSLICSYMGDAMDPTDLPSPAFIKP 583

Query: 11   IEL 3
            +EL
Sbjct: 584  VEL 586


>ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Glycine
            max]
          Length = 1391

 Score =  488 bits (1256), Expect = e-135
 Identities = 240/303 (79%), Positives = 262/303 (86%)
 Frame = -1

Query: 911  QANACLHQGLQEPSNSSKLLDDWDYLQVEVAQYINSDVRVALQAQQPTKPLSGFVQRLKG 732
            QANA L Q LQE + SSK LD WD LQ EVAQ+INSDVR      QPTK L+GFVQRLKG
Sbjct: 286  QANAVLRQELQESTFSSKFLDGWDILQNEVAQFINSDVRGIPFYMQPTKQLAGFVQRLKG 345

Query: 731  KQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAVPLLMASILTYPESVNHHNIEKLRQC 552
            K GRFRGNLSGKRVE+TGRTVISPDPNLKI+EVA+P+ MA ILTYPE V HHNIEKLRQC
Sbjct: 346  KHGRFRGNLSGKRVEYTGRTVISPDPNLKISEVAIPIHMARILTYPERVTHHNIEKLRQC 405

Query: 551  VRNGPKKYPGAKFVIEPNGDKKDLSFPGRKRIADELKFGYIVHRHLEDGDVVLFNRQPSL 372
            VRNGP KYPGA+ +    G    L    RKR ADEL+ G IV RHLEDGD+VLFNRQPSL
Sbjct: 406  VRNGPDKYPGARMLRRDGGHSWSLKVLCRKRAADELRIGDIVDRHLEDGDIVLFNRQPSL 465

Query: 371  HRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNN 192
            HRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEA+LLMGV+NN
Sbjct: 466  HRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAILLMGVENN 525

Query: 191  LCTPKNGAILVASTQDFLTSSFLITRKDTFYDRATFSLMCSYMGDGMEIIDMPTPAVLKP 12
            LCTPKNG ILVASTQDFLTSSFLITRKDTFYDR+TFSL+CSY+GDGM+ ID+PTPA++KP
Sbjct: 526  LCTPKNGEILVASTQDFLTSSFLITRKDTFYDRSTFSLICSYIGDGMDPIDLPTPAIVKP 585

Query: 11   IEL 3
            +EL
Sbjct: 586  VEL 588


>ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Cucumis
            sativus]
          Length = 1400

 Score =  488 bits (1255), Expect = e-135
 Identities = 238/303 (78%), Positives = 261/303 (86%)
 Frame = -1

Query: 911  QANACLHQGLQEPSNSSKLLDDWDYLQVEVAQYINSDVRVALQAQQPTKPLSGFVQRLKG 732
            Q NA + Q L   ++ +K L+ WD LQ EVAQ INSDVR    + Q +KPL+GFVQRLKG
Sbjct: 283  QQNASVSQELSTSNSQAKCLESWDMLQSEVAQLINSDVRGIPFSMQVSKPLAGFVQRLKG 342

Query: 731  KQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAVPLLMASILTYPESVNHHNIEKLRQC 552
            KQGRFRGNL GKRVEFTGRTVISPDPNLKITEVAVP+ MA ILTYPE V  HNIEKLRQC
Sbjct: 343  KQGRFRGNLCGKRVEFTGRTVISPDPNLKITEVAVPIHMARILTYPERVTRHNIEKLRQC 402

Query: 551  VRNGPKKYPGAKFVIEPNGDKKDLSFPGRKRIADELKFGYIVHRHLEDGDVVLFNRQPSL 372
            V NGP KYPGA+ +   +G  + L   GRKR+ADELK+G IV RHLEDGDVVLFNRQPSL
Sbjct: 403  VSNGPDKYPGARMLRHLDGSMRSLMISGRKRLADELKYGEIVERHLEDGDVVLFNRQPSL 462

Query: 371  HRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNN 192
            HRMSIMCHR R+MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA+LLMGVQNN
Sbjct: 463  HRMSIMCHRVRVMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAILLMGVQNN 522

Query: 191  LCTPKNGAILVASTQDFLTSSFLITRKDTFYDRATFSLMCSYMGDGMEIIDMPTPAVLKP 12
            LCTPKNG ILVASTQDFLTSSFLITRKDTFYDRA FSLMCSYMGDGM+++D+PTPA++KP
Sbjct: 523  LCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPALVKP 582

Query: 11   IEL 3
            IEL
Sbjct: 583  IEL 585


>ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
            X2 [Solanum tuberosum]
          Length = 1243

 Score =  486 bits (1250), Expect = e-135
 Identities = 240/303 (79%), Positives = 264/303 (87%)
 Frame = -1

Query: 911  QANACLHQGLQEPSNSSKLLDDWDYLQVEVAQYINSDVRVALQAQQPTKPLSGFVQRLKG 732
            QANA LHQ + + S+  K L+ W  LQ+EVAQYINSDVR      Q  +PLSGF QRLKG
Sbjct: 285  QANASLHQEMSD-SSPVKSLNLWIDLQMEVAQYINSDVRGVPLHMQAQRPLSGFTQRLKG 343

Query: 731  KQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAVPLLMASILTYPESVNHHNIEKLRQC 552
            KQGRFRGNLSGKRVE+TGRTVISPDPNLKITEVA+P+LMA ILTYPE V+ HNIEKLRQC
Sbjct: 344  KQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAQILTYPERVSQHNIEKLRQC 403

Query: 551  VRNGPKKYPGAKFVIEPNGDKKDLSFPGRKRIADELKFGYIVHRHLEDGDVVLFNRQPSL 372
            VRNGP KYPGAKF+  P+G +  L F  RKR ADELKFGYIV RHLEDGD+VLFNRQPSL
Sbjct: 404  VRNGPNKYPGAKFIRHPDGSEISLMFTSRKRHADELKFGYIVDRHLEDGDIVLFNRQPSL 463

Query: 371  HRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNN 192
            HRMSIM HRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAL+LMGVQNN
Sbjct: 464  HRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNN 523

Query: 191  LCTPKNGAILVASTQDFLTSSFLITRKDTFYDRATFSLMCSYMGDGMEIIDMPTPAVLKP 12
            LCTPK+G ILVASTQDFLTSSFLITRKDTFY+RA+FSL+CSYMGD M+  D+P+PA +KP
Sbjct: 524  LCTPKSGEILVASTQDFLTSSFLITRKDTFYNRASFSLICSYMGDAMDPTDLPSPAFIKP 583

Query: 11   IEL 3
            +EL
Sbjct: 584  VEL 586


>ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
            X1 [Solanum tuberosum]
          Length = 1394

 Score =  486 bits (1250), Expect = e-135
 Identities = 240/303 (79%), Positives = 264/303 (87%)
 Frame = -1

Query: 911  QANACLHQGLQEPSNSSKLLDDWDYLQVEVAQYINSDVRVALQAQQPTKPLSGFVQRLKG 732
            QANA LHQ + + S+  K L+ W  LQ+EVAQYINSDVR      Q  +PLSGF QRLKG
Sbjct: 285  QANASLHQEMSD-SSPVKSLNLWIDLQMEVAQYINSDVRGVPLHMQAQRPLSGFTQRLKG 343

Query: 731  KQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAVPLLMASILTYPESVNHHNIEKLRQC 552
            KQGRFRGNLSGKRVE+TGRTVISPDPNLKITEVA+P+LMA ILTYPE V+ HNIEKLRQC
Sbjct: 344  KQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAQILTYPERVSQHNIEKLRQC 403

Query: 551  VRNGPKKYPGAKFVIEPNGDKKDLSFPGRKRIADELKFGYIVHRHLEDGDVVLFNRQPSL 372
            VRNGP KYPGAKF+  P+G +  L F  RKR ADELKFGYIV RHLEDGD+VLFNRQPSL
Sbjct: 404  VRNGPNKYPGAKFIRHPDGSEISLMFTSRKRHADELKFGYIVDRHLEDGDIVLFNRQPSL 463

Query: 371  HRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNN 192
            HRMSIM HRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAL+LMGVQNN
Sbjct: 464  HRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNN 523

Query: 191  LCTPKNGAILVASTQDFLTSSFLITRKDTFYDRATFSLMCSYMGDGMEIIDMPTPAVLKP 12
            LCTPK+G ILVASTQDFLTSSFLITRKDTFY+RA+FSL+CSYMGD M+  D+P+PA +KP
Sbjct: 524  LCTPKSGEILVASTQDFLTSSFLITRKDTFYNRASFSLICSYMGDAMDPTDLPSPAFIKP 583

Query: 11   IEL 3
            +EL
Sbjct: 584  VEL 586


>ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
            X1 [Citrus sinensis] gi|568870034|ref|XP_006488217.1|
            PREDICTED: DNA-directed RNA polymerase III subunit
            rpc1-like isoform X2 [Citrus sinensis]
          Length = 1404

 Score =  481 bits (1238), Expect = e-133
 Identities = 238/303 (78%), Positives = 261/303 (86%)
 Frame = -1

Query: 911  QANACLHQGLQEPSNSSKLLDDWDYLQVEVAQYINSDVRVALQAQQPTKPLSGFVQRLKG 732
            Q NA L Q L E +++ K L  W+ LQVEVAQYINSDVR    + Q  +PLSGFVQRLKG
Sbjct: 291  QTNASLQQELVEANSAFKSLAGWETLQVEVAQYINSDVRGVPFSMQVARPLSGFVQRLKG 350

Query: 731  KQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAVPLLMASILTYPESVNHHNIEKLRQC 552
            KQGRFRGNLSGKRVE+TGRTVISPDPNLKITEVA+P+ MA ILTYPE V+ HNIEKLRQC
Sbjct: 351  KQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPIRMARILTYPERVSDHNIEKLRQC 410

Query: 551  VRNGPKKYPGAKFVIEPNGDKKDLSFPGRKRIADELKFGYIVHRHLEDGDVVLFNRQPSL 372
            ++NGP KYPGA+ +  P+G  + L    R ++A ELK G IV RHLEDGDVVLFNRQPSL
Sbjct: 411  IQNGPDKYPGARMIRYPDGTARVLYGKFRNQLAVELKSGCIVDRHLEDGDVVLFNRQPSL 470

Query: 371  HRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNN 192
            HRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNN
Sbjct: 471  HRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNN 530

Query: 191  LCTPKNGAILVASTQDFLTSSFLITRKDTFYDRATFSLMCSYMGDGMEIIDMPTPAVLKP 12
            LCTPKNG ILVASTQDFLTSSFLITRKDTFYDRA FSLMC YMGDGM+ +D+PTPA+LKP
Sbjct: 531  LCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCCYMGDGMDRVDLPTPAILKP 590

Query: 11   IEL 3
            +EL
Sbjct: 591  VEL 593


>ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citrus clementina]
            gi|557526635|gb|ESR37941.1| hypothetical protein
            CICLE_v10027681mg [Citrus clementina]
          Length = 1397

 Score =  481 bits (1238), Expect = e-133
 Identities = 238/303 (78%), Positives = 261/303 (86%)
 Frame = -1

Query: 911  QANACLHQGLQEPSNSSKLLDDWDYLQVEVAQYINSDVRVALQAQQPTKPLSGFVQRLKG 732
            Q NA L Q L E +++ K L  W+ LQVEVAQYINSDVR    + Q  +PLSGFVQRLKG
Sbjct: 306  QTNASLQQELVEANSAFKSLAGWETLQVEVAQYINSDVRGVPFSMQVARPLSGFVQRLKG 365

Query: 731  KQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAVPLLMASILTYPESVNHHNIEKLRQC 552
            KQGRFRGNLSGKRVE+TGRTVISPDPNLKITEVA+P+ MA ILTYPE V+ HNIEKLRQC
Sbjct: 366  KQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPIRMARILTYPERVSDHNIEKLRQC 425

Query: 551  VRNGPKKYPGAKFVIEPNGDKKDLSFPGRKRIADELKFGYIVHRHLEDGDVVLFNRQPSL 372
            ++NGP KYPGA+ +  P+G  + L    R ++A ELK G IV RHLEDGDVVLFNRQPSL
Sbjct: 426  IQNGPDKYPGARMIRYPDGTARVLYGKFRNQLAVELKSGCIVDRHLEDGDVVLFNRQPSL 485

Query: 371  HRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNN 192
            HRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNN
Sbjct: 486  HRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNN 545

Query: 191  LCTPKNGAILVASTQDFLTSSFLITRKDTFYDRATFSLMCSYMGDGMEIIDMPTPAVLKP 12
            LCTPKNG ILVASTQDFLTSSFLITRKDTFYDRA FSLMC YMGDGM+ +D+PTPA+LKP
Sbjct: 546  LCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCCYMGDGMDRVDLPTPAILKP 605

Query: 11   IEL 3
            +EL
Sbjct: 606  VEL 608


>gb|EMJ09344.1| hypothetical protein PRUPE_ppa024521mg, partial [Prunus persica]
          Length = 867

 Score =  481 bits (1238), Expect = e-133
 Identities = 235/303 (77%), Positives = 260/303 (85%)
 Frame = -1

Query: 911  QANACLHQGLQEPSNSSKLLDDWDYLQVEVAQYINSDVRVALQAQQPTKPLSGFVQRLKG 732
            Q+NA L + L E  ++ K L  WD LQVEVAQYINSD+R    + Q  KPLSGFVQRLKG
Sbjct: 294  QSNAILRRDLLEAKSAPKCLASWDILQVEVAQYINSDIRGVPFSMQTAKPLSGFVQRLKG 353

Query: 731  KQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAVPLLMASILTYPESVNHHNIEKLRQC 552
            K GRFRGNLSGKRVE+TGRTVISPDPNLKITEV VP+ MA ILTYPE V+HHNIEKLRQC
Sbjct: 354  KGGRFRGNLSGKRVEYTGRTVISPDPNLKITEVGVPIKMAQILTYPERVSHHNIEKLRQC 413

Query: 551  VRNGPKKYPGAKFVIEPNGDKKDLSFPGRKRIADELKFGYIVHRHLEDGDVVLFNRQPSL 372
            V NGP KYPGA+ +  P+G +  L    RK  AD LK+G IV RHLEDGD+VLFNRQPSL
Sbjct: 414  VSNGPDKYPGARMLRNPDGTEWSLKV-NRKNAADGLKYGDIVERHLEDGDIVLFNRQPSL 472

Query: 371  HRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNN 192
            HRMSIMCHRA++MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA++LMGVQNN
Sbjct: 473  HRMSIMCHRAKVMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAVMLMGVQNN 532

Query: 191  LCTPKNGAILVASTQDFLTSSFLITRKDTFYDRATFSLMCSYMGDGMEIIDMPTPAVLKP 12
            LCTPKNG +LVASTQDFLTSSFLITRKDTFYDRA+FSLMCSYMGDG + +D+PTPAV+KP
Sbjct: 533  LCTPKNGEVLVASTQDFLTSSFLITRKDTFYDRASFSLMCSYMGDGTDPVDLPTPAVIKP 592

Query: 11   IEL 3
            IEL
Sbjct: 593  IEL 595


>ref|XP_006279465.1| hypothetical protein CARUB_v10025743mg [Capsella rubella]
            gi|482548169|gb|EOA12363.1| hypothetical protein
            CARUB_v10025743mg [Capsella rubella]
          Length = 1376

 Score =  478 bits (1230), Expect = e-132
 Identities = 236/303 (77%), Positives = 261/303 (86%)
 Frame = -1

Query: 911  QANACLHQGLQEPSNSSKLLDDWDYLQVEVAQYINSDVRVALQAQQPTKPLSGFVQRLKG 732
            Q NA LH+ L +P+ S+K +  WD +Q EVA+YINS+VR  +Q Q  +KP+SG +QRLKG
Sbjct: 290  QDNASLHRILSQPTTSAKNMQVWDTVQSEVAKYINSEVR-GVQNQPDSKPMSGILQRLKG 348

Query: 731  KQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAVPLLMASILTYPESVNHHNIEKLRQC 552
            KQGRFR NLSGKRVE+TGRTVISPDPNLKITEV +P+LMA ILT+PE V+ HNIEKLRQC
Sbjct: 349  KQGRFRANLSGKRVEYTGRTVISPDPNLKITEVGIPILMARILTFPECVSRHNIEKLRQC 408

Query: 551  VRNGPKKYPGAKFVIEPNGDKKDLSFPGRKRIADELKFGYIVHRHLEDGDVVLFNRQPSL 372
            VRNGP KYPGA+ V  P+G  + L    RKRIADEL  G IV RHLE+GD VLFNRQPSL
Sbjct: 409  VRNGPNKYPGARNVRYPDGSSRALVGDYRKRIADELAIGCIVDRHLEEGDAVLFNRQPSL 468

Query: 371  HRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNN 192
            HRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA+ LMGVQNN
Sbjct: 469  HRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAITLMGVQNN 528

Query: 191  LCTPKNGAILVASTQDFLTSSFLITRKDTFYDRATFSLMCSYMGDGMEIIDMPTPAVLKP 12
            LCTPKNG ILVASTQDFLTSSFLITRKDTFYDRA FSL+CSYMGDGM+ ID+PTP VLKP
Sbjct: 529  LCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLICSYMGDGMDAIDLPTPTVLKP 588

Query: 11   IEL 3
            IEL
Sbjct: 589  IEL 591


>ref|XP_002864665.1| hypothetical protein ARALYDRAFT_496142 [Arabidopsis lyrata subsp.
            lyrata] gi|297310500|gb|EFH40924.1| hypothetical protein
            ARALYDRAFT_496142 [Arabidopsis lyrata subsp. lyrata]
          Length = 1376

 Score =  478 bits (1229), Expect = e-132
 Identities = 235/303 (77%), Positives = 259/303 (85%)
 Frame = -1

Query: 911  QANACLHQGLQEPSNSSKLLDDWDYLQVEVAQYINSDVRVALQAQQPTKPLSGFVQRLKG 732
            Q NACLH+ L +P+ S K +  WD +Q EVA+YINS+VR  +Q Q    PLSG +QRLKG
Sbjct: 290  QNNACLHRILSQPTTSPKNMQVWDTVQSEVAKYINSEVR-GVQNQPEKTPLSGLLQRLKG 348

Query: 731  KQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAVPLLMASILTYPESVNHHNIEKLRQC 552
            KQGRFR NLSGKRVE+TGRTVISPDPNLKITEV +P+LMA ILT+PE V+ HNIEKLRQC
Sbjct: 349  KQGRFRANLSGKRVEYTGRTVISPDPNLKITEVGIPILMARILTFPECVSRHNIEKLRQC 408

Query: 551  VRNGPKKYPGAKFVIEPNGDKKDLSFPGRKRIADELKFGYIVHRHLEDGDVVLFNRQPSL 372
            VRNGP KYPGA+ V  P+G  + L    RKRIADEL  G IV RHLE+GD VLFNRQPSL
Sbjct: 409  VRNGPNKYPGARNVRYPDGSSRTLVGDYRKRIADELTIGCIVDRHLEEGDAVLFNRQPSL 468

Query: 371  HRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNN 192
            HRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA+ LMGVQNN
Sbjct: 469  HRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAITLMGVQNN 528

Query: 191  LCTPKNGAILVASTQDFLTSSFLITRKDTFYDRATFSLMCSYMGDGMEIIDMPTPAVLKP 12
            LCTPKNG ILVASTQDFLT+SFLITRKDTFYDRA FSL+CSYMGDGM+ ID+PTP +LKP
Sbjct: 529  LCTPKNGEILVASTQDFLTTSFLITRKDTFYDRAAFSLICSYMGDGMDAIDLPTPTILKP 588

Query: 11   IEL 3
            IEL
Sbjct: 589  IEL 591


>gb|ESW04135.1| hypothetical protein PHAVU_011G070100g [Phaseolus vulgaris]
          Length = 1392

 Score =  477 bits (1227), Expect = e-132
 Identities = 233/303 (76%), Positives = 261/303 (86%)
 Frame = -1

Query: 911  QANACLHQGLQEPSNSSKLLDDWDYLQVEVAQYINSDVRVALQAQQPTKPLSGFVQRLKG 732
            QANA L Q LQE S SSK LD W+ LQ EVAQ+INS+VR      Q TK L+GFVQRLKG
Sbjct: 286  QANAVLRQELQESSVSSKFLDGWEILQNEVAQFINSEVRGIPFYMQSTKQLAGFVQRLKG 345

Query: 731  KQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAVPLLMASILTYPESVNHHNIEKLRQC 552
            K GRFRGNLSGKRVE+TGRTVISPDPNLKI+EVA+P+LMASILTYPE V HHNIEKLRQC
Sbjct: 346  KHGRFRGNLSGKRVEYTGRTVISPDPNLKISEVAIPILMASILTYPERVTHHNIEKLRQC 405

Query: 551  VRNGPKKYPGAKFVIEPNGDKKDLSFPGRKRIADELKFGYIVHRHLEDGDVVLFNRQPSL 372
            VRNGP KYPGA+ +    G    L    RKR ADEL+ G IV RHLEDGD+VLFNRQPSL
Sbjct: 406  VRNGPDKYPGARMLRRDGGHSWSLKVLCRKRAADELRIGDIVDRHLEDGDIVLFNRQPSL 465

Query: 371  HRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNN 192
            HRMSIM HRARIMPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEA+LLMGVQNN
Sbjct: 466  HRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAILLMGVQNN 525

Query: 191  LCTPKNGAILVASTQDFLTSSFLITRKDTFYDRATFSLMCSYMGDGMEIIDMPTPAVLKP 12
            LCTPKNG ILVASTQDFLTSSFL+TRKDTFYDR+ F+ +C+++GDG+++ID+PTPA++KP
Sbjct: 526  LCTPKNGEILVASTQDFLTSSFLVTRKDTFYDRSAFTNICTFIGDGLDLIDLPTPAIVKP 585

Query: 11   IEL 3
            +EL
Sbjct: 586  VEL 588


>ref|XP_004505924.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
            X2 [Cicer arietinum]
          Length = 1291

 Score =  476 bits (1226), Expect = e-132
 Identities = 235/303 (77%), Positives = 262/303 (86%)
 Frame = -1

Query: 911  QANACLHQGLQEPSNSSKLLDDWDYLQVEVAQYINSDVRVALQAQQPTKPLSGFVQRLKG 732
            QANA LH+ L+E   S+K    ++ LQ  VAQYINSDV+    + Q +KPL+GFVQR+KG
Sbjct: 179  QANAALHKELEE---STKFQGGFEMLQFLVAQYINSDVKGGPYSMQASKPLTGFVQRIKG 235

Query: 731  KQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAVPLLMASILTYPESVNHHNIEKLRQC 552
            KQGRFR NLSGKRVE+TGRTVISPDPNLKITEVA+P+ MA ILTYPE V HHNIEKLRQC
Sbjct: 236  KQGRFRSNLSGKRVEYTGRTVISPDPNLKITEVAIPIHMARILTYPERVTHHNIEKLRQC 295

Query: 551  VRNGPKKYPGAKFVIEPNGDKKDLSFPGRKRIADELKFGYIVHRHLEDGDVVLFNRQPSL 372
            +RNGP KYPGAK +    G   +L    RKR+ADEL+FG IV RHLEDGDVVLFNRQPSL
Sbjct: 296  LRNGPDKYPGAKLLRHAGGTTWNLKVSCRKRLADELRFGDIVDRHLEDGDVVLFNRQPSL 355

Query: 371  HRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNN 192
            HRMS+MCHRARIMPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEALLLM VQNN
Sbjct: 356  HRMSMMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALLLMTVQNN 415

Query: 191  LCTPKNGAILVASTQDFLTSSFLITRKDTFYDRATFSLMCSYMGDGMEIIDMPTPAVLKP 12
            LCTPKNG ILVASTQDFLTSSFLITRKDTFYDR+TFSL+CSYMGDGM+ ID+PTPA++KP
Sbjct: 416  LCTPKNGEILVASTQDFLTSSFLITRKDTFYDRSTFSLICSYMGDGMDPIDLPTPAIIKP 475

Query: 11   IEL 3
            +EL
Sbjct: 476  VEL 478


>ref|XP_004505923.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
            X1 [Cicer arietinum]
          Length = 1399

 Score =  476 bits (1226), Expect = e-132
 Identities = 235/303 (77%), Positives = 262/303 (86%)
 Frame = -1

Query: 911  QANACLHQGLQEPSNSSKLLDDWDYLQVEVAQYINSDVRVALQAQQPTKPLSGFVQRLKG 732
            QANA LH+ L+E   S+K    ++ LQ  VAQYINSDV+    + Q +KPL+GFVQR+KG
Sbjct: 287  QANAALHKELEE---STKFQGGFEMLQFLVAQYINSDVKGGPYSMQASKPLTGFVQRIKG 343

Query: 731  KQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAVPLLMASILTYPESVNHHNIEKLRQC 552
            KQGRFR NLSGKRVE+TGRTVISPDPNLKITEVA+P+ MA ILTYPE V HHNIEKLRQC
Sbjct: 344  KQGRFRSNLSGKRVEYTGRTVISPDPNLKITEVAIPIHMARILTYPERVTHHNIEKLRQC 403

Query: 551  VRNGPKKYPGAKFVIEPNGDKKDLSFPGRKRIADELKFGYIVHRHLEDGDVVLFNRQPSL 372
            +RNGP KYPGAK +    G   +L    RKR+ADEL+FG IV RHLEDGDVVLFNRQPSL
Sbjct: 404  LRNGPDKYPGAKLLRHAGGTTWNLKVSCRKRLADELRFGDIVDRHLEDGDVVLFNRQPSL 463

Query: 371  HRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNN 192
            HRMS+MCHRARIMPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEALLLM VQNN
Sbjct: 464  HRMSMMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALLLMTVQNN 523

Query: 191  LCTPKNGAILVASTQDFLTSSFLITRKDTFYDRATFSLMCSYMGDGMEIIDMPTPAVLKP 12
            LCTPKNG ILVASTQDFLTSSFLITRKDTFYDR+TFSL+CSYMGDGM+ ID+PTPA++KP
Sbjct: 524  LCTPKNGEILVASTQDFLTSSFLITRKDTFYDRSTFSLICSYMGDGMDPIDLPTPAIIKP 583

Query: 11   IEL 3
            +EL
Sbjct: 584  VEL 586


>ref|XP_004169848.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III
           subunit rpc1-like, partial [Cucumis sativus]
          Length = 693

 Score =  476 bits (1226), Expect = e-132
 Identities = 231/283 (81%), Positives = 250/283 (88%)
 Frame = -1

Query: 851 DDWDYLQVEVAQYINSDVRVALQAQQPTKPLSGFVQRLKGKQGRFRGNLSGKRVEFTGRT 672
           + WD LQ EVAQ INSDVR    + Q +KPL+GFVQRLKGKQGRFRGNL GKRVEFTGRT
Sbjct: 1   ESWDMLQSEVAQLINSDVRGIPFSMQVSKPLAGFVQRLKGKQGRFRGNLCGKRVEFTGRT 60

Query: 671 VISPDPNLKITEVAVPLLMASILTYPESVNHHNIEKLRQCVRNGPKKYPGAKFVIEPNGD 492
           VISPDPNLKITEVAVP+ MA ILTYPE V  HNIEKLRQCV NGP KYPGA+ +   +G 
Sbjct: 61  VISPDPNLKITEVAVPIHMARILTYPERVTRHNIEKLRQCVSNGPDKYPGARMLRHLDGS 120

Query: 491 KKDLSFPGRKRIADELKFGYIVHRHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRF 312
            + L   GRKR+ADELK+G IV RHLEDGDVVLFNRQPSLHRMSIMCHR R+MPWRTLRF
Sbjct: 121 MRSLMISGRKRLADELKYGEIVERHLEDGDVVLFNRQPSLHRMSIMCHRVRVMPWRTLRF 180

Query: 311 NESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGAILVASTQDFLTS 132
           NESVCNPYNADFDGDEMNMHVPQTEEARTEA+LLMGVQNNLCTPKNG ILVASTQDFLTS
Sbjct: 181 NESVCNPYNADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKNGEILVASTQDFLTS 240

Query: 131 SFLITRKDTFYDRATFSLMCSYMGDGMEIIDMPTPAVLKPIEL 3
           SFLITRKDTFYDRA FSLMCSYMGDGM+++D+PTPA++KPIEL
Sbjct: 241 SFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPALVKPIEL 283


>dbj|BAA96933.1| DNA-directed RNA polymerase II largest chain [Arabidopsis thaliana]
          Length = 1383

 Score =  474 bits (1220), Expect = e-131
 Identities = 234/301 (77%), Positives = 258/301 (85%)
 Frame = -1

Query: 905  NACLHQGLQEPSNSSKLLDDWDYLQVEVAQYINSDVRVALQAQQPTKPLSGFVQRLKGKQ 726
            NA LH+ L +P++S K +  WD +Q+EVA+YINS+VR   Q Q    PLSG +QRLKGK 
Sbjct: 292  NASLHKILSQPTSSPKNMQVWDTVQIEVARYINSEVR-GCQNQPEEHPLSGILQRLKGKG 350

Query: 725  GRFRGNLSGKRVEFTGRTVISPDPNLKITEVAVPLLMASILTYPESVNHHNIEKLRQCVR 546
            GRFR NLSGKRVEFTGRTVISPDPNLKITEV +P+LMA ILT+PE V+ HNIEKLRQCVR
Sbjct: 351  GRFRANLSGKRVEFTGRTVISPDPNLKITEVGIPILMAQILTFPECVSRHNIEKLRQCVR 410

Query: 545  NGPKKYPGAKFVIEPNGDKKDLSFPGRKRIADELKFGYIVHRHLEDGDVVLFNRQPSLHR 366
            NGP KYPGA+ V  P+G  + L    RKRIADEL  G IV RHL++GDVVLFNRQPSLHR
Sbjct: 411  NGPNKYPGARNVRYPDGSSRTLVGDYRKRIADELAIGCIVDRHLQEGDVVLFNRQPSLHR 470

Query: 365  MSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLC 186
            MSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA+ LMGVQNNLC
Sbjct: 471  MSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAITLMGVQNNLC 530

Query: 185  TPKNGAILVASTQDFLTSSFLITRKDTFYDRATFSLMCSYMGDGMEIIDMPTPAVLKPIE 6
            TPKNG ILVASTQDFLTSSFLITRKDTFYDRA FSL+CSYMGDGM+ ID+PTP +LKPIE
Sbjct: 531  TPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLICSYMGDGMDSIDLPTPTILKPIE 590

Query: 5    L 3
            L
Sbjct: 591  L 591


>ref|NP_001190573.1| nuclear RNA polymerase C1 [Arabidopsis thaliana]
            gi|332009887|gb|AED97270.1| nuclear RNA polymerase C1
            [Arabidopsis thaliana]
          Length = 1391

 Score =  474 bits (1220), Expect = e-131
 Identities = 234/301 (77%), Positives = 258/301 (85%)
 Frame = -1

Query: 905  NACLHQGLQEPSNSSKLLDDWDYLQVEVAQYINSDVRVALQAQQPTKPLSGFVQRLKGKQ 726
            NA LH+ L +P++S K +  WD +Q+EVA+YINS+VR   Q Q    PLSG +QRLKGK 
Sbjct: 302  NASLHKILSQPTSSPKNMQVWDTVQIEVARYINSEVR-GCQNQPEEHPLSGILQRLKGKG 360

Query: 725  GRFRGNLSGKRVEFTGRTVISPDPNLKITEVAVPLLMASILTYPESVNHHNIEKLRQCVR 546
            GRFR NLSGKRVEFTGRTVISPDPNLKITEV +P+LMA ILT+PE V+ HNIEKLRQCVR
Sbjct: 361  GRFRANLSGKRVEFTGRTVISPDPNLKITEVGIPILMAQILTFPECVSRHNIEKLRQCVR 420

Query: 545  NGPKKYPGAKFVIEPNGDKKDLSFPGRKRIADELKFGYIVHRHLEDGDVVLFNRQPSLHR 366
            NGP KYPGA+ V  P+G  + L    RKRIADEL  G IV RHL++GDVVLFNRQPSLHR
Sbjct: 421  NGPNKYPGARNVRYPDGSSRTLVGDYRKRIADELAIGCIVDRHLQEGDVVLFNRQPSLHR 480

Query: 365  MSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLC 186
            MSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA+ LMGVQNNLC
Sbjct: 481  MSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAITLMGVQNNLC 540

Query: 185  TPKNGAILVASTQDFLTSSFLITRKDTFYDRATFSLMCSYMGDGMEIIDMPTPAVLKPIE 6
            TPKNG ILVASTQDFLTSSFLITRKDTFYDRA FSL+CSYMGDGM+ ID+PTP +LKPIE
Sbjct: 541  TPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLICSYMGDGMDSIDLPTPTILKPIE 600

Query: 5    L 3
            L
Sbjct: 601  L 601


>ref|NP_200812.2| nuclear RNA polymerase C1 [Arabidopsis thaliana]
            gi|332009886|gb|AED97269.1| nuclear RNA polymerase C1
            [Arabidopsis thaliana]
          Length = 1376

 Score =  474 bits (1220), Expect = e-131
 Identities = 234/301 (77%), Positives = 258/301 (85%)
 Frame = -1

Query: 905  NACLHQGLQEPSNSSKLLDDWDYLQVEVAQYINSDVRVALQAQQPTKPLSGFVQRLKGKQ 726
            NA LH+ L +P++S K +  WD +Q+EVA+YINS+VR   Q Q    PLSG +QRLKGK 
Sbjct: 292  NASLHKILSQPTSSPKNMQVWDTVQIEVARYINSEVR-GCQNQPEEHPLSGILQRLKGKG 350

Query: 725  GRFRGNLSGKRVEFTGRTVISPDPNLKITEVAVPLLMASILTYPESVNHHNIEKLRQCVR 546
            GRFR NLSGKRVEFTGRTVISPDPNLKITEV +P+LMA ILT+PE V+ HNIEKLRQCVR
Sbjct: 351  GRFRANLSGKRVEFTGRTVISPDPNLKITEVGIPILMAQILTFPECVSRHNIEKLRQCVR 410

Query: 545  NGPKKYPGAKFVIEPNGDKKDLSFPGRKRIADELKFGYIVHRHLEDGDVVLFNRQPSLHR 366
            NGP KYPGA+ V  P+G  + L    RKRIADEL  G IV RHL++GDVVLFNRQPSLHR
Sbjct: 411  NGPNKYPGARNVRYPDGSSRTLVGDYRKRIADELAIGCIVDRHLQEGDVVLFNRQPSLHR 470

Query: 365  MSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLC 186
            MSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA+ LMGVQNNLC
Sbjct: 471  MSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAITLMGVQNNLC 530

Query: 185  TPKNGAILVASTQDFLTSSFLITRKDTFYDRATFSLMCSYMGDGMEIIDMPTPAVLKPIE 6
            TPKNG ILVASTQDFLTSSFLITRKDTFYDRA FSL+CSYMGDGM+ ID+PTP +LKPIE
Sbjct: 531  TPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLICSYMGDGMDSIDLPTPTILKPIE 590

Query: 5    L 3
            L
Sbjct: 591  L 591