BLASTX nr result
ID: Achyranthes23_contig00033179
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Achyranthes23_contig00033179
(251 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 83 1e-15
ref|XP_004252454.1| PREDICTED: uncharacterized protein LOC101254... 79 4e-13
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly... 63 1e-10
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus] 70 3e-10
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group] 68 3e-10
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula] 69 4e-10
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula] 69 4e-10
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula] 69 4e-10
gb|AAW22873.1| putative polyprotein [Solanum lycopersicum] 69 4e-10
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula] 68 8e-10
gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas] 63 1e-09
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group] 66 2e-09
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 65 3e-09
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group] 65 3e-09
gb|EXB73293.1| Retrovirus-related Pol polyprotein from transposo... 59 4e-09
gb|ABG22119.1| polyprotein [Cynara cardunculus var. scolymus] 60 4e-09
gb|ABD32732.1| hypothetical protein MtrDRAFT_AC150777g7v1 [Medic... 66 5e-09
gb|AFB73912.1| polyprotein [Citrus sinensis] 65 7e-09
emb|CAN61646.1| hypothetical protein VITISV_019792 [Vitis vinifera] 65 7e-09
emb|CBG76267.1| OO_Ba0005L10-OO_Ba0081K17.18 [Oryza officinalis] 65 9e-09
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 83.2 bits (204), Expect(3) = 1e-15
Identities = 39/63 (61%), Positives = 53/63 (84%)
Frame = -3
Query: 246 AQKILGMEIYRDRKQKKLFLSQKSYIQMILHRFDMSTAKPLNTPSTANIHLSLSLAPISK 67
A+KILGMEI RDR+++KLFLSQ+SYIQ +L RF MS++KP++TPS ANIHL+ AP S+
Sbjct: 1022 ARKILGMEIIRDRERRKLFLSQRSYIQKVLARFGMSSSKPIDTPSAANIHLTAMFAPQSE 1081
Query: 66 KRR 58
+ +
Sbjct: 1082 EEK 1084
Score = 23.9 bits (50), Expect(3) = 1e-15
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -2
Query: 70 EEKACMEKVPYSSAV 26
EEK M +VPY+SAV
Sbjct: 1082 EEKEYMSRVPYASAV 1096
Score = 20.8 bits (42), Expect(3) = 1e-15
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 26 SLMYAMVC 3
SLMYAMVC
Sbjct: 1098 SLMYAMVC 1105
>ref|XP_004252454.1| PREDICTED: uncharacterized protein LOC101254576, partial [Solanum
lycopersicum]
Length = 538
Score = 79.0 bits (193), Expect(2) = 4e-13
Identities = 36/63 (57%), Positives = 51/63 (80%)
Frame = -3
Query: 246 AQKILGMEIYRDRKQKKLFLSQKSYIQMILHRFDMSTAKPLNTPSTANIHLSLSLAPISK 67
A+K LGMEI RDR+++K+FLSQ+SYIQ +L RF MS++KP++TPS NIHL+ AP S+
Sbjct: 32 ARKFLGMEIVRDRERRKIFLSQRSYIQKVLARFGMSSSKPVDTPSAVNIHLTTMFAPQSE 91
Query: 66 KRR 58
+ +
Sbjct: 92 EEK 94
Score = 20.8 bits (42), Expect(2) = 4e-13
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 26 SLMYAMVC 3
SLMYAMVC
Sbjct: 108 SLMYAMVC 115
>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
1-94; Includes: RecName: Full=Protease; Includes:
RecName: Full=Reverse transcriptase; Includes: RecName:
Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
protein product [Nicotiana tabacum]
Length = 1328
Score = 63.2 bits (152), Expect(3) = 1e-10
Identities = 28/63 (44%), Positives = 45/63 (71%)
Frame = -3
Query: 246 AQKILGMEIYRDRKQKKLFLSQKSYIQMILHRFDMSTAKPLNTPSTANIHLSLSLAPISK 67
AQ+ILGM+I R+R +KL+LSQ+ YI+ +L RF+M AKP++TP ++ LS + P +
Sbjct: 1041 AQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTV 1100
Query: 66 KRR 58
+ +
Sbjct: 1101 EEK 1103
Score = 26.6 bits (57), Expect(3) = 1e-10
Identities = 13/18 (72%), Positives = 13/18 (72%)
Frame = -2
Query: 79 TYFEEKACMEKVPYSSAV 26
T EEK M KVPYSSAV
Sbjct: 1098 TTVEEKGNMAKVPYSSAV 1115
Score = 20.8 bits (42), Expect(3) = 1e-10
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 26 SLMYAMVC 3
SLMYAMVC
Sbjct: 1117 SLMYAMVC 1124
>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
Length = 1305
Score = 69.7 bits (169), Expect(2) = 3e-10
Identities = 32/64 (50%), Positives = 46/64 (71%)
Frame = -3
Query: 246 AQKILGMEIYRDRKQKKLFLSQKSYIQMILHRFDMSTAKPLNTPSTANIHLSLSLAPISK 67
A KILGM+I+RDRK +K++LSQK+Y+Q +L RF+M P++TP N LS S+ P S+
Sbjct: 1018 ANKILGMQIHRDRKDRKIWLSQKNYLQKVLRRFNMQDYNPISTPLPVNYKLSSSMIPSSE 1077
Query: 66 KRRV 55
R+
Sbjct: 1078 AERM 1081
Score = 20.4 bits (41), Expect(2) = 3e-10
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -1
Query: 26 SLMYAMVC 3
SLMYAM+C
Sbjct: 1094 SLMYAMIC 1101
>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1243
Score = 68.2 bits (165), Expect(3) = 3e-10
Identities = 33/59 (55%), Positives = 43/59 (72%)
Frame = -3
Query: 246 AQKILGMEIYRDRKQKKLFLSQKSYIQMILHRFDMSTAKPLNTPSTANIHLSLSLAPIS 70
A+KILGMEI R+R KL+LSQK YI+ +L RF+M AKP++TP A+ LS L P+S
Sbjct: 1018 AKKILGMEITRERHSGKLYLSQKGYIEKVLRRFNMHDAKPVSTPLAAHFRLSSDLCPLS 1076
Score = 20.8 bits (42), Expect(3) = 3e-10
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 26 SLMYAMVC 3
SLMYAMVC
Sbjct: 1094 SLMYAMVC 1101
Score = 20.4 bits (41), Expect(3) = 3e-10
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -2
Query: 55 MEKVPYSSAV 26
M +VPYSSAV
Sbjct: 1083 MSRVPYSSAV 1092
>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 69.3 bits (168), Expect(2) = 4e-10
Identities = 30/64 (46%), Positives = 47/64 (73%)
Frame = -3
Query: 246 AQKILGMEIYRDRKQKKLFLSQKSYIQMILHRFDMSTAKPLNTPSTANIHLSLSLAPISK 67
A KILGM+I+RDRK +K++LSQK+Y++ +L RF+M KP++TP N LS ++P ++
Sbjct: 1018 ANKILGMQIHRDRKDRKIWLSQKNYLRKVLRRFNMQDCKPISTPLPVNFKLSSGMSPSNE 1077
Query: 66 KRRV 55
R+
Sbjct: 1078 AERM 1081
Score = 20.4 bits (41), Expect(2) = 4e-10
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -1
Query: 26 SLMYAMVC 3
SLMYAM+C
Sbjct: 1094 SLMYAMIC 1101
>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 69.3 bits (168), Expect(2) = 4e-10
Identities = 30/64 (46%), Positives = 47/64 (73%)
Frame = -3
Query: 246 AQKILGMEIYRDRKQKKLFLSQKSYIQMILHRFDMSTAKPLNTPSTANIHLSLSLAPISK 67
A KILGM+I+RDRK +K++LSQK+Y++ +L RF+M KP++TP N LS ++P ++
Sbjct: 1018 ANKILGMQIHRDRKDRKIWLSQKNYLRKVLRRFNMQDCKPISTPLPVNFKLSSGMSPSNE 1077
Query: 66 KRRV 55
R+
Sbjct: 1078 AERM 1081
Score = 20.4 bits (41), Expect(2) = 4e-10
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -1
Query: 26 SLMYAMVC 3
SLMYAM+C
Sbjct: 1094 SLMYAMIC 1101
>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 69.3 bits (168), Expect(2) = 4e-10
Identities = 30/64 (46%), Positives = 47/64 (73%)
Frame = -3
Query: 246 AQKILGMEIYRDRKQKKLFLSQKSYIQMILHRFDMSTAKPLNTPSTANIHLSLSLAPISK 67
A KILGM+I+RDRK +K++LSQK+Y++ +L RF+M KP++TP N LS ++P ++
Sbjct: 1018 ANKILGMQIHRDRKDRKIWLSQKNYLRKVLRRFNMQDCKPISTPLPVNFKLSSGMSPSNE 1077
Query: 66 KRRV 55
R+
Sbjct: 1078 AERM 1081
Score = 20.4 bits (41), Expect(2) = 4e-10
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -1
Query: 26 SLMYAMVC 3
SLMYAM+C
Sbjct: 1094 SLMYAMIC 1101
>gb|AAW22873.1| putative polyprotein [Solanum lycopersicum]
Length = 687
Score = 68.9 bits (167), Expect(2) = 4e-10
Identities = 33/63 (52%), Positives = 46/63 (73%)
Frame = -3
Query: 246 AQKILGMEIYRDRKQKKLFLSQKSYIQMILHRFDMSTAKPLNTPSTANIHLSLSLAPISK 67
A++ILGMEI RDRK KL+LSQ++YI+ +L RF+M AKP+NTP A+ LS P ++
Sbjct: 401 AKQILGMEIARDRKAGKLWLSQENYIERVLERFNMKNAKPVNTPLAAHFKLSKRCCPTTE 460
Query: 66 KRR 58
K +
Sbjct: 461 KEK 463
Score = 20.8 bits (42), Expect(2) = 4e-10
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 26 SLMYAMVC 3
SLMYAMVC
Sbjct: 477 SLMYAMVC 484
>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 68.2 bits (165), Expect(2) = 8e-10
Identities = 30/64 (46%), Positives = 46/64 (71%)
Frame = -3
Query: 246 AQKILGMEIYRDRKQKKLFLSQKSYIQMILHRFDMSTAKPLNTPSTANIHLSLSLAPISK 67
A KILGM+I+RDRK K++LSQK+Y++ +L RF+M KP++TP N LS ++P ++
Sbjct: 1018 ANKILGMQIHRDRKDMKIWLSQKNYLRKVLRRFNMQDCKPISTPLPVNFKLSSGMSPSNE 1077
Query: 66 KRRV 55
R+
Sbjct: 1078 AERM 1081
Score = 20.4 bits (41), Expect(2) = 8e-10
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -1
Query: 26 SLMYAMVC 3
SLMYAM+C
Sbjct: 1094 SLMYAMIC 1101
>gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]
Length = 1415
Score = 62.8 bits (151), Expect(3) = 1e-09
Identities = 30/63 (47%), Positives = 44/63 (69%)
Frame = -3
Query: 246 AQKILGMEIYRDRKQKKLFLSQKSYIQMILHRFDMSTAKPLNTPSTANIHLSLSLAPISK 67
A++ILGM+I RDR+ KKL+LSQ+ YI+ +L RF M+ AKP++TP + L P S+
Sbjct: 1039 AKQILGMKIIRDRQNKKLWLSQEKYIEKVLERFHMNEAKPVSTPLDMHFKLCKKQCPSSE 1098
Query: 66 KRR 58
K +
Sbjct: 1099 KEK 1101
Score = 23.5 bits (49), Expect(3) = 1e-09
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = -2
Query: 70 EEKACMEKVPYSSAV 26
+EK M++VPYSSAV
Sbjct: 1099 KEKEEMQRVPYSSAV 1113
Score = 20.8 bits (42), Expect(3) = 1e-09
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 26 SLMYAMVC 3
SLMYAMVC
Sbjct: 1115 SLMYAMVC 1122
>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1211
Score = 66.2 bits (160), Expect(2) = 2e-09
Identities = 33/59 (55%), Positives = 42/59 (71%)
Frame = -3
Query: 246 AQKILGMEIYRDRKQKKLFLSQKSYIQMILHRFDMSTAKPLNTPSTANIHLSLSLAPIS 70
A+KILGMEI R+R KL+LSQK YI+ +L RF+M AKP++TP A+ LS L P S
Sbjct: 925 AKKILGMEITRERHSGKLYLSQKGYIEKVLRRFNMHDAKPVSTPLAAHFRLSSDLCPQS 983
Score = 20.8 bits (42), Expect(2) = 2e-09
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 26 SLMYAMVC 3
SLMYAMVC
Sbjct: 1001 SLMYAMVC 1008
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 64.7 bits (156), Expect(3) = 3e-09
Identities = 33/59 (55%), Positives = 41/59 (69%)
Frame = -3
Query: 246 AQKILGMEIYRDRKQKKLFLSQKSYIQMILHRFDMSTAKPLNTPSTANIHLSLSLAPIS 70
A+KILGMEI R R KL+LSQK YI+ +L RF+M AKP++TP A+ LS L P S
Sbjct: 1253 AKKILGMEITRKRHSFKLYLSQKGYIEKVLRRFNMHDAKPVSTPLAAHFRLSSDLCPQS 1311
Score = 20.8 bits (42), Expect(3) = 3e-09
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 26 SLMYAMVC 3
SLMYAMVC
Sbjct: 1329 SLMYAMVC 1336
Score = 20.4 bits (41), Expect(3) = 3e-09
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -2
Query: 55 MEKVPYSSAV 26
M +VPYSSAV
Sbjct: 1318 MSRVPYSSAV 1327
>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
Length = 1181
Score = 65.1 bits (157), Expect(3) = 3e-09
Identities = 32/59 (54%), Positives = 41/59 (69%)
Frame = -3
Query: 246 AQKILGMEIYRDRKQKKLFLSQKSYIQMILHRFDMSTAKPLNTPSTANIHLSLSLAPIS 70
A+KILGMEI R+R KL+LSQK YI+ + RF+M AKP++TP A+ LS L P S
Sbjct: 895 AKKILGMEITRERHSDKLYLSQKGYIEKVFRRFNMHDAKPVSTPLAAHFRLSSDLCPQS 953
Score = 20.4 bits (41), Expect(3) = 3e-09
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -2
Query: 55 MEKVPYSSAV 26
M +VPYSSAV
Sbjct: 960 MSRVPYSSAV 969
Score = 20.4 bits (41), Expect(3) = 3e-09
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -1
Query: 26 SLMYAMVC 3
SLMYAM+C
Sbjct: 971 SLMYAMIC 978
>gb|EXB73293.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Morus
notabilis]
Length = 1822
Score = 58.9 bits (141), Expect(3) = 4e-09
Identities = 29/64 (45%), Positives = 42/64 (65%)
Frame = -3
Query: 246 AQKILGMEIYRDRKQKKLFLSQKSYIQMILHRFDMSTAKPLNTPSTANIHLSLSLAPISK 67
A+KILGMEI RDRKQ LF+SQ Y+ +L RF M +K + TP + LS ++P++
Sbjct: 394 AKKILGMEIIRDRKQGTLFVSQCGYLWKVLKRFGMLESKSVQTPLAGHFKLSTRMSPMTD 453
Query: 66 KRRV 55
+ +V
Sbjct: 454 EEKV 457
Score = 25.8 bits (55), Expect(3) = 4e-09
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = -2
Query: 70 EEKACMEKVPYSSAV 26
EEK +EK+PY+SAV
Sbjct: 454 EEKVSVEKIPYASAV 468
Score = 20.8 bits (42), Expect(3) = 4e-09
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 26 SLMYAMVC 3
SLMYAMVC
Sbjct: 470 SLMYAMVC 477
>gb|ABG22119.1| polyprotein [Cynara cardunculus var. scolymus]
Length = 358
Score = 60.1 bits (144), Expect(3) = 4e-09
Identities = 30/63 (47%), Positives = 42/63 (66%)
Frame = -3
Query: 246 AQKILGMEIYRDRKQKKLFLSQKSYIQMILHRFDMSTAKPLNTPSTANIHLSLSLAPISK 67
A+KI G+EI RDRK + L LSQ+SY++ +L RF+M AK +NTP A+ LS P S
Sbjct: 119 ARKIFGIEISRDRKARTLTLSQRSYVEKVLKRFNMYGAKTVNTPIAAHFKLSACQCPDSN 178
Query: 66 KRR 58
+ +
Sbjct: 179 EEK 181
Score = 25.0 bits (53), Expect(3) = 4e-09
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -2
Query: 70 EEKACMEKVPYSSAV 26
EEK M +VPYSSAV
Sbjct: 179 EEKEYMSRVPYSSAV 193
Score = 20.4 bits (41), Expect(3) = 4e-09
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -1
Query: 26 SLMYAMVC 3
SLMYAM+C
Sbjct: 195 SLMYAMIC 202
>gb|ABD32732.1| hypothetical protein MtrDRAFT_AC150777g7v1 [Medicago truncatula]
Length = 624
Score = 65.9 bits (159), Expect = 5e-09
Identities = 32/61 (52%), Positives = 44/61 (72%)
Frame = -3
Query: 246 AQKILGMEIYRDRKQKKLFLSQKSYIQMILHRFDMSTAKPLNTPSTANIHLSLSLAPISK 67
A+KILGMEI RDR+ KLFLSQ+ YI+ +L RF+M+ KP++TP A+ LS P +K
Sbjct: 396 AKKILGMEIRRDRQAGKLFLSQQKYIKRVLDRFNMNNCKPVSTPLAAHFKLSSEFCPNTK 455
Query: 66 K 64
+
Sbjct: 456 E 456
>gb|AFB73912.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 65.5 bits (158), Expect = 7e-09
Identities = 30/63 (47%), Positives = 44/63 (69%)
Frame = -3
Query: 246 AQKILGMEIYRDRKQKKLFLSQKSYIQMILHRFDMSTAKPLNTPSTANIHLSLSLAPISK 67
A KILGM+I+RDR +K++LSQK+Y++ IL RF+M K ++TP N LS S+ P ++
Sbjct: 1022 ANKILGMQIHRDRNNRKIWLSQKNYLKKILRRFNMQDCKSISTPLPVNFKLSSSMCPSNE 1081
Query: 66 KRR 58
R
Sbjct: 1082 AER 1084
>emb|CAN61646.1| hypothetical protein VITISV_019792 [Vitis vinifera]
Length = 654
Score = 65.5 bits (158), Expect = 7e-09
Identities = 37/81 (45%), Positives = 48/81 (59%)
Frame = -3
Query: 243 QKILGMEIYRDRKQKKLFLSQKSYIQMILHRFDMSTAKPLNTPSTANIHLSLSLAPISKK 64
+KILGMEI +RK KL+LSQK YI +LHRF+M AK ++TP + LS +L+P S
Sbjct: 441 KKILGMEILGNRKADKLYLSQKGYIXKVLHRFNMQNAKLVSTPLVLHFRLSFALSPQSDD 500
Query: 63 RRVWRRFLTLVQ*SDVCYGLH 1
+ S VCYG H
Sbjct: 501 --------DCSRVSHVCYGSH 513
>emb|CBG76267.1| OO_Ba0005L10-OO_Ba0081K17.18 [Oryza officinalis]
Length = 472
Score = 65.1 bits (157), Expect = 9e-09
Identities = 31/59 (52%), Positives = 43/59 (72%)
Frame = -3
Query: 246 AQKILGMEIYRDRKQKKLFLSQKSYIQMILHRFDMSTAKPLNTPSTANIHLSLSLAPIS 70
A+KILG+EI R+R+ +L+LSQK YI+ +LH F+M AKP++TP A+ LS L P S
Sbjct: 266 AKKILGIEITRERQSGELYLSQKGYIEKVLHHFNMHDAKPVSTPLAAHFRLSSDLCPQS 324