BLASTX nr result

ID: Achyranthes23_contig00032087 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00032087
         (302 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006300939.1| hypothetical protein CARUB_v10021318mg, part...    65   7e-09
dbj|BAD66732.1| orf147a [Beta vulgaris subsp. vulgaris] gi|54606...    65   7e-09
ref|NP_001031892.1| RNA-directed DNA polymerase (reverse transcr...    64   2e-08
ref|XP_004253231.1| PREDICTED: uncharacterized protein LOC101248...    64   3e-08
ref|NP_178356.1| RNA-directed DNA polymerase (reverse transcript...    64   3e-08
ref|NP_175039.1| RNA-directed DNA polymerase (reverse transcript...    62   6e-08
gb|AAD26953.1| putative non-LTR retrolelement reverse transcript...    62   6e-08
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]                62   1e-07
gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CA...    61   1e-07
gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]               61   1e-07
ref|NP_567266.1| RNA-directed DNA polymerase (reverse transcript...    61   2e-07
ref|XP_002332211.1| predicted protein [Populus trichocarpa]            61   2e-07
gb|ABK28243.1| unknown [Arabidopsis thaliana]                          61   2e-07
gb|ABE65512.1| hypothetical protein At4g04650 [Arabidopsis thali...    61   2e-07
gb|ABD96948.1| hypothetical protein [Cleome spinosa]                   60   2e-07
gb|AAF79288.1|AC068602_11 F14D16.18 [Arabidopsis thaliana]             60   3e-07
dbj|BAB01155.1| unnamed protein product [Arabidopsis thaliana] g...    60   3e-07
gb|AEL30369.1| hypothetical protein 205D04_9 [Arachis hypogaea]        60   3e-07
ref|XP_002331075.1| predicted protein [Populus trichocarpa]            60   3e-07
ref|XP_002329612.1| predicted protein [Populus trichocarpa]            60   3e-07

>ref|XP_006300939.1| hypothetical protein CARUB_v10021318mg, partial [Capsella rubella]
           gi|482569649|gb|EOA33837.1| hypothetical protein
           CARUB_v10021318mg, partial [Capsella rubella]
          Length = 290

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
 Frame = -2

Query: 298 VWCKIAIPKHSFITWLTMNARLRTRDKLLKFGM-IADNCLLCDEAEETTAHLFYKCKYVQ 122
           VW K  IPKH+FI+W+ +  RL TRD+L  +GM +   CLLC  + E+  HLF++C Y  
Sbjct: 117 VWFKERIPKHAFISWVVIRNRLTTRDRLRGWGMNVPSECLLCTSSAESRLHLFFECAYSH 176

Query: 121 KCLEIW 104
              E+W
Sbjct: 177 ---EVW 179


>dbj|BAD66732.1| orf147a [Beta vulgaris subsp. vulgaris] gi|54606753|dbj|BAD66776.1|
           orf147a [Beta vulgaris subsp. vulgaris]
          Length = 147

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 32/78 (41%), Positives = 45/78 (57%), Gaps = 4/78 (5%)
 Frame = -2

Query: 277 PKHSFITWLTMNARLRTRDKLLKFGMIADN-CLLCDEAEETTAHLFYKCKY---VQKCLE 110
           PK +FITWLT+  RL T D+L KFG++ D  C+LC   +ET  HLF+ C++   +   L 
Sbjct: 12  PKCTFITWLTILDRLATCDRLQKFGIVCDQLCVLCGNVDETRDHLFFVCEFSYEIWSSLL 71

Query: 109 IWKQTLSVRGSWQNIMDS 56
            W       G WQ ++ S
Sbjct: 72  CWLGIQRTAGDWQGVLQS 89


>ref|NP_001031892.1| RNA-directed DNA polymerase (reverse transcriptase)-related family
           protein [Arabidopsis thaliana]
           gi|98962153|gb|ABF59406.1| unknown protein [Arabidopsis
           thaliana] gi|332004916|gb|AED92299.1| RNA-directed DNA
           polymerase (reverse transcriptase)-related family
           protein [Arabidopsis thaliana]
          Length = 209

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 28/58 (48%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
 Frame = -2

Query: 298 VWCKIAIPKHSFITWLTMNARLRTRDKLLKFGM-IADNCLLCDEAEETTAHLFYKCKY 128
           +W K  IPKH+FI+W+ +  RL TRDKLL +G+ +   CLLC+  +ET  HLF+ C +
Sbjct: 148 IWFKGRIPKHAFISWVNIRHRLPTRDKLLSWGLHVPSLCLLCNAFDETRQHLFFDCVF 205


>ref|XP_004253231.1| PREDICTED: uncharacterized protein LOC101248660 [Solanum
           lycopersicum]
          Length = 187

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 36/99 (36%), Positives = 51/99 (51%), Gaps = 9/99 (9%)
 Frame = -2

Query: 283 AIPKHSFITWLTMNARLRTRDKLLKFGMIAD-NCLLCDEAEETTAHLFYKCKYVQKCLEI 107
           A PK  F  W+ MN +L T D+L K+GMI D  C++C  AEE+  HLF  C Y +    I
Sbjct: 44  ARPKACFTLWILMNRKLATVDRLTKWGMILDRGCVMCKRAEESMEHLFIHCHYAE---AI 100

Query: 106 WKQTLSVRGSWQNIM--------DSGRWCIRRIRGVNRR 14
           W++ L     W N+         D  +WC++  +G   R
Sbjct: 101 WERLL----RWINVQINMPKSWTDFIQWCVKNGKGKTAR 135


>ref|NP_178356.1| RNA-directed DNA polymerase (reverse transcriptase)-related family
           protein [Arabidopsis thaliana] gi|3184287|gb|AAC18934.1|
           putative non-LTR retroelement reverse transcriptase
           [Arabidopsis thaliana] gi|330250497|gb|AEC05591.1|
           RNA-directed DNA polymerase (reverse
           transcriptase)-related family protein [Arabidopsis
           thaliana]
          Length = 211

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 27/66 (40%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
 Frame = -2

Query: 298 VWCKIAIPKHSFITWLTMNARLRTRDKLLKFGMI-ADNCLLCDEAEETTAHLFYKCKYVQ 122
           +W K  IPKH+FI W+ M  RL T+D+++ +G I    CL C+  +ET  HLF+ C++ +
Sbjct: 47  IWFKGKIPKHAFIAWVNMRHRLHTKDRMISWGFIFPPLCLFCNTHDETRQHLFFDCEFAR 106

Query: 121 KCLEIW 104
              E+W
Sbjct: 107 ---EVW 109


>ref|NP_175039.1| RNA-directed DNA polymerase (reverse transcriptase)-related family
           protein [Arabidopsis thaliana]
           gi|332193871|gb|AEE31992.1| RNA-directed DNA polymerase
           (reverse transcriptase)-related family protein
           [Arabidopsis thaliana]
          Length = 320

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 29/67 (43%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
 Frame = -2

Query: 298 VWCKIAIPKHSFITWLTMNARLRTRDKLLKFGM-IADNCLLCDEAEETTAHLFYKCKYVQ 122
           VW K  +PKH+FI W+    RL TRD+L  +G+ I   CLLC+  +E+ AHLF++C +  
Sbjct: 155 VWFKNHVPKHAFICWVVAWNRLHTRDRLRSWGLSIPAVCLLCNSHDESRAHLFFECPF-- 212

Query: 121 KCLEIWK 101
            C  +W+
Sbjct: 213 -CGAVWR 218


>gb|AAD26953.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 323

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
 Frame = -2

Query: 298 VWCKIAIPKHSFITWLTMNARLRTRDKLLKFGM-IADNCLLCDEAEETTAHLFYKCKYVQ 122
           VW K  IPKH+FI W+    RL TRD+L ++G+ I   C+LC+  +ET  HLF++C++  
Sbjct: 158 VWFKDRIPKHAFICWVAAWKRLHTRDRLTQWGLNIPTVCVLCNVVDETHDHLFFQCQFSN 217

Query: 121 KCLEIW 104
              EIW
Sbjct: 218 ---EIW 220


>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 8/87 (9%)
 Frame = -2

Query: 298 VWCKIAIPKHSFITWLTMNARLRTRDKLLKF---GMIADNCLLCDEAEETTAHLFYKCKY 128
           VW + A PK++  TWL ++ RL T D++LK+   G ++ NC+LC    +T  HLF+ C Y
Sbjct: 707 VWFRHATPKYALCTWLAIHNRLPTGDRMLKWNSSGSVSGNCVLCTNNSKTLEHLFFSCSY 766

Query: 127 VQK-----CLEIWKQTLSVRGSWQNIM 62
                      IWK   S R  W +++
Sbjct: 767 ASTVWAALAKGIWKTRYSTR--WSHLL 791


>gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CAB80742.1|
           AT4g02490 [Arabidopsis thaliana]
          Length = 657

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 28/66 (42%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
 Frame = -2

Query: 298 VWCKIAIPKHSFITWLTMNARLRTRDKLLKFGMIAD-NCLLCDEAEETTAHLFYKCKYVQ 122
           VW    +PKH+FI+W+T   RL TRD+L  +G+I    C+LC+  +ET  HLF+ C++  
Sbjct: 586 VWFTNQVPKHAFISWVTAWNRLHTRDRLRSWGLIVPAECVLCNLVDETRDHLFFACRFSS 645

Query: 121 KCLEIW 104
           +   IW
Sbjct: 646 R---IW 648


>gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]
          Length = 1161

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 27/66 (40%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
 Frame = -2

Query: 298  VWCKIAIPKHSFITWLTMNARLRTRDKLLKFGM-IADNCLLCDEAEETTAHLFYKCKYVQ 122
            VW K  +PK +FI W+  + RL TRD+L ++G  I   C+LC++ +E+  HLF++C++  
Sbjct: 990  VWFKDHVPKQAFICWVVAHNRLHTRDRLRRWGFSIPPTCVLCNDLDESREHLFFRCQFSS 1049

Query: 121  KCLEIW 104
               EIW
Sbjct: 1050 ---EIW 1052


>ref|NP_567266.1| RNA-directed DNA polymerase (reverse transcriptase)-related family
           protein [Arabidopsis thaliana]
           gi|5732057|gb|AAD48956.1|AF149414_5 contains similarity
           to a family of Arabidopsis thaliana predicted proteins,
           which have similarity to reverse transcriptases; see
           T14P8.10 (GB:AF069298) [Arabidopsis thaliana]
           gi|7267223|emb|CAB80830.1| AT4g04650 [Arabidopsis
           thaliana] gi|332657009|gb|AEE82409.1| RNA-directed DNA
           polymerase (reverse transcriptase)-related family
           protein [Arabidopsis thaliana]
          Length = 332

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
 Frame = -2

Query: 298 VWCKIAIPKHSFITWLTMNARLRTRDKLLKFGM-IADNCLLCDEAEETTAHLFYKCKYVQ 122
           VW K  +PKH+FI W+    RL TRD+L  +G+ I   CLLC+  +++ AHLF++C++  
Sbjct: 133 VWFKNHVPKHAFICWVVAWNRLHTRDRLQNWGLSIPAECLLCNAHDDSRAHLFFECQFSG 192

Query: 121 KCLEIWKQTLSVRGSWQNIMDSGRWCIRRIRGVN 20
                +  + ++    Q +MD   W +   R  N
Sbjct: 193 VVWRFFTASTNLNPPAQ-LMDCLNWLLSPSREKN 225


>ref|XP_002332211.1| predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
 Frame = -2

Query: 298  VWCKIAIPKHSFITWLTMNARLRTRDKLLKFGMIADN-CLLCDEAEETTAHLFYKCKYVQ 122
            VW K A+P+HSF+ W+ +  +L T+DKL +FG+   N C LC    E   HLF++C Y +
Sbjct: 1219 VWFKNAVPRHSFLLWMAVQQKLTTQDKLYRFGIHGPNRCSLCLRNNEDHNHLFFECSYTK 1278


>gb|ABK28243.1| unknown [Arabidopsis thaliana]
          Length = 297

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
 Frame = -2

Query: 298 VWCKIAIPKHSFITWLTMNARLRTRDKLLKFGM-IADNCLLCDEAEETTAHLFYKCKYVQ 122
           VW K  +PKH+FI W+    RL TRD+L  +G+ I   CLLC+  +++ AHLF++C++  
Sbjct: 133 VWFKNHVPKHAFICWVVAWNRLHTRDRLQNWGLSIPAECLLCNAHDDSRAHLFFECQFSG 192

Query: 121 KCLEIWKQTLSVRGSWQNIMDSGRWCIRRIRGVN 20
                +  + ++    Q +MD   W +   R  N
Sbjct: 193 VVWRFFTASTNLNPPAQ-LMDCLNWLLSPSREKN 225


>gb|ABE65512.1| hypothetical protein At4g04650 [Arabidopsis thaliana]
          Length = 296

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
 Frame = -2

Query: 298 VWCKIAIPKHSFITWLTMNARLRTRDKLLKFGM-IADNCLLCDEAEETTAHLFYKCKYVQ 122
           VW K  +PKH+FI W+    RL TRD+L  +G+ I   CLLC+  +++ AHLF++C++  
Sbjct: 133 VWFKNHVPKHAFICWVVAWNRLHTRDRLQNWGLSIPAECLLCNAHDDSRAHLFFECQFSG 192

Query: 121 KCLEIWKQTLSVRGSWQNIMDSGRWCIRRIRGVN 20
                +  + ++    Q +MD   W +   R  N
Sbjct: 193 VVWRFFTASTNLNPPAQ-LMDCLNWLLSPSREKN 225


>gb|ABD96948.1| hypothetical protein [Cleome spinosa]
          Length = 539

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 27/67 (40%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
 Frame = -2

Query: 298 VWCKIAIPKHSFITWLTMNARLRTRDKLLKFGMIAD-NCLLCDEAEETTAHLFYKCKYVQ 122
           VW  +AIP+H+F+ W  M  RL T+D+L ++G+ +D  C LCD  +E+  HLF+ C Y  
Sbjct: 432 VWFPLAIPRHAFLHWQVMLFRLPTKDRLQQWGITSDATCRLCDGEDESHQHLFFGCTYAS 491

Query: 121 KCLEIWK 101
               +W+
Sbjct: 492 ---HLWR 495


>gb|AAF79288.1|AC068602_11 F14D16.18 [Arabidopsis thaliana]
          Length = 582

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
 Frame = -2

Query: 298 VWCKIAIPKHSFITWLTMNARLRTRDKLLKFG-MIADNCLLCDEAEETTAHLFYKCKYVQ 122
           +W K + PK+S ITWL    R+ T DKL+K+   +  NC+LC    ET  HLF+ C Y  
Sbjct: 404 IWFKHSTPKYSLITWLVQKNRVATGDKLIKWNPQVTPNCILCQHTLETWDHLFFMCPY-- 461

Query: 121 KCLEIW 104
              ++W
Sbjct: 462 -SFQVW 466


>dbj|BAB01155.1| unnamed protein product [Arabidopsis thaliana]
           gi|49823524|gb|AAT68745.1| hypothetical protein
           At3g17200 [Arabidopsis thaliana]
           gi|60547763|gb|AAX23845.1| hypothetical protein
           At3g17200 [Arabidopsis thaliana]
          Length = 310

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
 Frame = -2

Query: 298 VWCKIAIPKHSFITWLTMNARLRTRDKLLKFGM-IADNCLLCDEAEETTAHLFYKCKYVQ 122
           VW   + PK+SFITWL    R+ T D+++ +   +  +C LCDE  ET  HLF+ C Y +
Sbjct: 144 VWFSHSTPKYSFITWLVSKNRMATGDRMVLWNQHVNTSCSLCDEPMETRDHLFFVCTYSR 203

Query: 121 KCLE-IWKQTLSVRGS--WQNIMD 59
           K  E I K  L  R S  W++I++
Sbjct: 204 KVWEDIAKPILQHRFSLDWKDILN 227


>gb|AEL30369.1| hypothetical protein 205D04_9 [Arachis hypogaea]
          Length = 458

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 34/106 (32%), Positives = 57/106 (53%), Gaps = 7/106 (6%)
 Frame = -2

Query: 298 VWCKIAIPKHSFITWLTMNARLRTRDKLLKFGMIA---DNCLLCDEAEETTAHLFYKCKY 128
           VW  +  P+   +TW  +  R+ T+D+L +F +I    + C+LCD+AEET  HLF +C+ 
Sbjct: 308 VWKGLVPPRVELLTWFVLVGRVNTKDRLCRFRVIPQQDNRCVLCDKAEETVFHLFLECET 367

Query: 127 VQKCLEIWKQTL----SVRGSWQNIMDSGRWCIRRIRGVNRRNLIL 2
             K    W + L    S+ G+ ++  +S  W    +R V+R+   L
Sbjct: 368 TWKVWCAWLRALGRQWSLPGTLKDHFES--WTKLSVRKVDRKRWFL 411


>ref|XP_002331075.1| predicted protein [Populus trichocarpa]
          Length = 517

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
 Frame = -2

Query: 298 VWCKIAIPKHSFITWLTMNARLRTRDKLLKFGMIADN-CLLCDEAEETTAHLFYKCKYVQ 122
           VW K A+P+HSF+ W+ +  +L T+DKL +FG+   N C LC    E   HLF++C Y +
Sbjct: 346 VWFKNAVPRHSFLLWMAVQQKLTTQDKLHRFGIHGPNRCSLCLRNNEDHNHLFFECSYTK 405


>ref|XP_002329612.1| predicted protein [Populus trichocarpa]
          Length = 1046

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
 Frame = -2

Query: 298  VWCKIAIPKHSFITWLTMNARLRTRDKLLKFGMIADN-CLLCDEAEETTAHLFYKCKYVQ 122
            VW K A+P+HSF+ W+ +  +L T+DKL +FG+   N C LC    E   HLF++C Y +
Sbjct: 879  VWFKNAVPRHSFLLWMVVQQKLTTQDKLHRFGIHGPNRCSLCLRNNEDHNHLFFECSYTK 938


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