BLASTX nr result

ID: Achyranthes23_contig00031315 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00031315
         (283 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006465349.1| PREDICTED: DNA-directed RNA polymerase III s...    55   7e-06
ref|XP_006427248.1| hypothetical protein CICLE_v10026399mg [Citr...    55   7e-06
gb|EXB67305.1| DNA-directed RNA polymerase III subunit RPC6 [Mor...    55   1e-05

>ref|XP_006465349.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
           [Citrus sinensis]
          Length = 233

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 28/67 (41%), Positives = 43/67 (64%)
 Frame = -2

Query: 207 KVATADGPRHAIKMTRAFNIDLTVEHVKEVLDKLVLEKAIVIVKGNGMGELTSFLIGVDY 28
           KVAT +G   +IK + AF +DLT + ++E++  LVL+  I+ VK NG GE T+  +G   
Sbjct: 122 KVATLEGISDSIKRSGAFKVDLTKQQIEEIVRALVLDNQIMEVKSNGSGEFTNIPVGKVC 181

Query: 27  YKIKAQG 7
           YK  ++G
Sbjct: 182 YKNVSKG 188


>ref|XP_006427248.1| hypothetical protein CICLE_v10026399mg [Citrus clementina]
           gi|557529238|gb|ESR40488.1| hypothetical protein
           CICLE_v10026399mg [Citrus clementina]
          Length = 233

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 28/67 (41%), Positives = 43/67 (64%)
 Frame = -2

Query: 207 KVATADGPRHAIKMTRAFNIDLTVEHVKEVLDKLVLEKAIVIVKGNGMGELTSFLIGVDY 28
           KVAT +G   +IK + AF +DLT + ++E++  LVL+  I+ VK NG GE T+  +G   
Sbjct: 122 KVATLEGISDSIKRSGAFKVDLTKQQIEEIVRALVLDNQIMEVKSNGSGEFTNIPVGKVC 181

Query: 27  YKIKAQG 7
           YK  ++G
Sbjct: 182 YKNVSKG 188


>gb|EXB67305.1| DNA-directed RNA polymerase III subunit RPC6 [Morus notabilis]
          Length = 238

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 28/70 (40%), Positives = 44/70 (62%)
 Frame = -2

Query: 210 QKVATADGPRHAIKMTRAFNIDLTVEHVKEVLDKLVLEKAIVIVKGNGMGELTSFLIGVD 31
           Q+VAT +G   AI+ +   N++LT   ++E++  LVL+  +V VK NGMGE  S  +G  
Sbjct: 127 QRVATLEGILDAIRKSGISNVELTTVQIEELVRALVLDNEVVEVKSNGMGEFDSIPVGKV 186

Query: 30  YYKIKAQGTR 1
            YK  ++G+R
Sbjct: 187 CYKSTSKGSR 196


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