BLASTX nr result

ID: Achyranthes23_contig00031281 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00031281
         (308 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004235225.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...    58   1e-06
ref|XP_006356480.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH...    57   3e-06

>ref|XP_004235225.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
           SHPRH-like [Solanum lycopersicum]
          Length = 1681

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
 Frame = +1

Query: 88  MGRIKQKPRRSVSVFEIESGSASENPDVKF---KDDDGNIQDTPFFFDVDKSSLNSLEHR 258
           MGR K KP RSV + E E      N +      + D+  + D PFF ++D+S+  S +H 
Sbjct: 1   MGRKKSKPNRSVGILEAEVPKGKLNGETDAGTAEKDESFVVDVPFFVEIDRSNWLSDKHM 60

Query: 259 DLSEIVVGNLNFSPEF 306
           D+SEIV+ +LN S EF
Sbjct: 61  DISEIVLSDLNVSDEF 76


>ref|XP_006356480.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like [Solanum
           tuberosum]
          Length = 1677

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 31/76 (40%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
 Frame = +1

Query: 88  MGRIKQKPRRSVSVFE--IESGSASENPDVKFKDDDGNIQ-DTPFFFDVDKSSLNSLEHR 258
           MGR K KP+RSV + E  +  G  +   D    + D +   D PFF ++D+S+  S +H 
Sbjct: 1   MGRRKSKPKRSVGILEGEVPKGKLNGKTDAGTAEKDESFAVDVPFFVEIDRSNWLSDQHM 60

Query: 259 DLSEIVVGNLNFSPEF 306
           D+SEIV+ +LN S EF
Sbjct: 61  DISEIVLSDLNVSDEF 76


Top