BLASTX nr result

ID: Achyranthes23_contig00030819 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00030819
         (372 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002862956.1| hypothetical protein ARALYDRAFT_497231 [Arab...    60   2e-07
gb|EOX97548.1| F-box family protein, putative isoform 3 [Theobro...    60   3e-07
gb|EOX97547.1| F-box family protein, putative isoform 2 [Theobro...    60   3e-07
gb|EOX97546.1| F-box family protein, putative isoform 1 [Theobro...    60   3e-07
ref|XP_006281434.1| hypothetical protein CARUB_v10027510mg [Caps...    59   5e-07
ref|XP_004231072.1| PREDICTED: F-box protein SKIP23-like [Solanu...    58   1e-06
emb|CAN66619.1| hypothetical protein VITISV_028369 [Vitis vinifera]    57   2e-06
ref|XP_002305539.2| hypothetical protein POPTR_0004s18630g [Popu...    56   4e-06
ref|XP_002279526.2| PREDICTED: LOW QUALITY PROTEIN: F-box protei...    56   4e-06
ref|XP_002278304.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    56   6e-06
ref|XP_002278547.2| PREDICTED: F-box protein SKIP23-like [Vitis ...    55   7e-06
ref|XP_002313690.1| hypothetical protein POPTR_0009s14200g [Popu...    55   7e-06

>ref|XP_002862956.1| hypothetical protein ARALYDRAFT_497231 [Arabidopsis lyrata subsp.
           lyrata] gi|297796961|ref|XP_002866365.1| hypothetical
           protein ARALYDRAFT_496144 [Arabidopsis lyrata subsp.
           lyrata] gi|297308742|gb|EFH39215.1| hypothetical protein
           ARALYDRAFT_497231 [Arabidopsis lyrata subsp. lyrata]
           gi|297312200|gb|EFH42624.1| hypothetical protein
           ARALYDRAFT_496144 [Arabidopsis lyrata subsp. lyrata]
          Length = 374

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 38/120 (31%), Positives = 55/120 (45%)
 Frame = +1

Query: 1   DILNFRAACNTWRNLTPFSLLNGKKTMLSPILPYHLYFKHSIFFYGNSLFLVASSFYLIQ 180
           D+L  R+ C TWR   P S  N K  +     P +L F  S         L  SS Y ++
Sbjct: 32  DLLCLRSVCATWRLSLPLSNNNNKNPLSK--FPKYLPFWSSSSSSSGFFILKQSSVYELE 89

Query: 181 STLNPNLPPWLFAVEEFNPGKLFLRQDLSRSVFDLLPVNFPKALDLSSFRVSELSKVYTL 360
           + LNP    WL  ++E +PG + +    S      LP NFP+ +DL  F V  + + Y +
Sbjct: 90  APLNPR--SWLVKIQETSPGNMRVLDLFSNDRICFLPENFPEKIDLQEFHVRLVRRTYRM 147


>gb|EOX97548.1| F-box family protein, putative isoform 3 [Theobroma cacao]
          Length = 407

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 46/127 (36%), Positives = 68/127 (53%), Gaps = 7/127 (5%)
 Frame = +1

Query: 1   DILNFRAACNTWRNLTPFSLLNGKKTMLSP---ILPYHLYFKHSIFFYGNS---LFLVAS 162
           D+  FR+ C+TWR+    S+ + K+  L+P   +LP       + F +  S   +FL+ S
Sbjct: 24  DVSRFRSVCSTWRS----SVTSPKRHRLAPRFPVLPDDGGISDTSFGFCLSKRIVFLLGS 79

Query: 163 SFYLIQSTLNPNLPPWLFAVEEFNPG-KLFLRQDLSRSVFDLLPVNFPKALDLSSFRVSE 339
               IQ+  + +   W+  +EE  P  ++ L   LSRS FD LP NFPK L+L  FRV E
Sbjct: 80  PETNIQADSSAS---WVIKIEEDVPNNRIQLLNPLSRSRFDSLPYNFPKPLNLLDFRVFE 136

Query: 340 LSKVYTL 360
           L + Y L
Sbjct: 137 LGEEYVL 143


>gb|EOX97547.1| F-box family protein, putative isoform 2 [Theobroma cacao]
          Length = 406

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 46/127 (36%), Positives = 68/127 (53%), Gaps = 7/127 (5%)
 Frame = +1

Query: 1   DILNFRAACNTWRNLTPFSLLNGKKTMLSP---ILPYHLYFKHSIFFYGNS---LFLVAS 162
           D+  FR+ C+TWR+    S+ + K+  L+P   +LP       + F +  S   +FL+ S
Sbjct: 24  DVSRFRSVCSTWRS----SVTSPKRHRLAPRFPVLPDDGGISDTSFGFCLSKRIVFLLGS 79

Query: 163 SFYLIQSTLNPNLPPWLFAVEEFNPG-KLFLRQDLSRSVFDLLPVNFPKALDLSSFRVSE 339
               IQ+  + +   W+  +EE  P  ++ L   LSRS FD LP NFPK L+L  FRV E
Sbjct: 80  PETNIQADSSAS---WVIKIEEDVPNNRIQLLNPLSRSRFDSLPYNFPKPLNLLDFRVFE 136

Query: 340 LSKVYTL 360
           L + Y L
Sbjct: 137 LGEEYVL 143


>gb|EOX97546.1| F-box family protein, putative isoform 1 [Theobroma cacao]
          Length = 411

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 46/127 (36%), Positives = 68/127 (53%), Gaps = 7/127 (5%)
 Frame = +1

Query: 1   DILNFRAACNTWRNLTPFSLLNGKKTMLSP---ILPYHLYFKHSIFFYGNS---LFLVAS 162
           D+  FR+ C+TWR+    S+ + K+  L+P   +LP       + F +  S   +FL+ S
Sbjct: 24  DVSRFRSVCSTWRS----SVTSPKRHRLAPRFPVLPDDGGISDTSFGFCLSKRIVFLLGS 79

Query: 163 SFYLIQSTLNPNLPPWLFAVEEFNPG-KLFLRQDLSRSVFDLLPVNFPKALDLSSFRVSE 339
               IQ+  + +   W+  +EE  P  ++ L   LSRS FD LP NFPK L+L  FRV E
Sbjct: 80  PETNIQADSSAS---WVIKIEEDVPNNRIQLLNPLSRSRFDSLPYNFPKPLNLLDFRVFE 136

Query: 340 LSKVYTL 360
           L + Y L
Sbjct: 137 LGEEYVL 143


>ref|XP_006281434.1| hypothetical protein CARUB_v10027510mg [Capsella rubella]
           gi|482550138|gb|EOA14332.1| hypothetical protein
           CARUB_v10027510mg [Capsella rubella]
          Length = 375

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 41/120 (34%), Positives = 57/120 (47%)
 Frame = +1

Query: 1   DILNFRAACNTWRNLTPFSLLNGKKTMLSPILPYHLYFKHSIFFYGNSLFLVASSFYLIQ 180
           D+L  R+ C TWR   P S  N KK  LS   P +L F  S         L  SS Y ++
Sbjct: 37  DLLCLRSVCATWRLCLPLSD-NNKKNRLSKF-PEYLPFWSSSSPASGFFVLKQSSIYKLE 94

Query: 181 STLNPNLPPWLFAVEEFNPGKLFLRQDLSRSVFDLLPVNFPKALDLSSFRVSELSKVYTL 360
           + LNP+   WL  ++E +PGK+ +    S      LP  FP  +DL  F V  + + Y +
Sbjct: 95  APLNPST--WLVKLQETSPGKMRVLDLFSNDRICFLPDKFPGKIDLQEFHVRLVRRAYRM 152


>ref|XP_004231072.1| PREDICTED: F-box protein SKIP23-like [Solanum lycopersicum]
          Length = 406

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 41/120 (34%), Positives = 56/120 (46%)
 Frame = +1

Query: 1   DILNFRAACNTWRNLTPFSLLNGKKTMLSPILPYHLYFKHSIFFYGNSLFLVASSFYLIQ 180
           D L FR+ C++WR+  P        +   PILP     ++S  F      L  S  YLI 
Sbjct: 24  DFLRFRSVCSSWRSSLPPKPYPSSLSRF-PILPNDGIAENSWGFK-----LSKSPLYLIH 77

Query: 181 STLNPNLPPWLFAVEEFNPGKLFLRQDLSRSVFDLLPVNFPKALDLSSFRVSELSKVYTL 360
                N   W+  ++  NP ++ L   LSRS    LP +FPK LD S + + EL   YTL
Sbjct: 78  PPNQTNNHGWIIKLDRENPQRMRLFNPLSRSQCKPLPPDFPKILDSSQYPIRELCHEYTL 137


>emb|CAN66619.1| hypothetical protein VITISV_028369 [Vitis vinifera]
          Length = 986

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 44/129 (34%), Positives = 57/129 (44%), Gaps = 9/129 (6%)
 Frame = +1

Query: 1   DILNFRAACNTWRNLTPFSLLNGKKTMLSPILPYHLYFKHSIFFYGNSLFLVASSFYLIQ 180
           D L+FR  C++W +         K  +LS  LPY +    ++            SF LI+
Sbjct: 28  DFLHFRGVCSSWMSSVS-PTFPSKNPLLSLKLPYPIASNANLNIXDPDTRNPRGSFSLIE 86

Query: 181 STLNPNLP---------PWLFAVEEFNPGKLFLRQDLSRSVFDLLPVNFPKALDLSSFRV 333
           STL    P           L  +EE  PGK  L   LSR     LP NFPK L+  +FRV
Sbjct: 87  STLYYLQPLRQTPDSKEALLVKLEEPKPGKGRLMDTLSRCAIQHLPKNFPKVLNTLNFRV 146

Query: 334 SELSKVYTL 360
            E+ K Y L
Sbjct: 147 REVGKAYGL 155


>ref|XP_002305539.2| hypothetical protein POPTR_0004s18630g [Populus trichocarpa]
           gi|566167272|ref|XP_006384594.1| hypothetical protein
           POPTR_0004s18630g [Populus trichocarpa]
           gi|550341338|gb|EEE86050.2| hypothetical protein
           POPTR_0004s18630g [Populus trichocarpa]
           gi|550341339|gb|ERP62391.1| hypothetical protein
           POPTR_0004s18630g [Populus trichocarpa]
          Length = 410

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 43/123 (34%), Positives = 57/123 (46%), Gaps = 3/123 (2%)
 Frame = +1

Query: 1   DILNFRAACNTWRNLTPFS---LLNGKKTMLSPILPYHLYFKHSIFFYGNSLFLVASSFY 171
           D+L FR+ CN+WR+  P     L +    +L      H  F  S+F    ++FLV     
Sbjct: 24  DLLRFRSVCNSWRSSIPPEPPCLSSNTFKILPNDGISHTSFGFSLF--KRTVFLVG---- 77

Query: 172 LIQSTLNPNLPPWLFAVEEFNPGKLFLRQDLSRSVFDLLPVNFPKALDLSSFRVSELSKV 351
           L  S    +   WL  +EE  PGK  L   LSR     LP N P+ LDL + R+ EL   
Sbjct: 78  LPNSHNQTDTQGWLIKIEEDVPGKKHLFDPLSRCRSTSLPNNLPRVLDLMNLRIRELGHE 137

Query: 352 YTL 360
           Y L
Sbjct: 138 YVL 140


>ref|XP_002279526.2| PREDICTED: LOW QUALITY PROTEIN: F-box protein SKIP23-like [Vitis
           vinifera]
          Length = 387

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 39/122 (31%), Positives = 61/122 (50%), Gaps = 2/122 (1%)
 Frame = +1

Query: 1   DILNFRAACNTWRNLTPFSLLNGKKTMLS--PILPYHLYFKHSIFFYGNSLFLVASSFYL 174
           D+L FR+ C++WR+ TP    +  +++ S  PILP   + + +  FY +   ++      
Sbjct: 24  DLLRFRSVCSSWRSSTP----SKPRSIFSHLPILPTTGFSEITWAFYLSKRSILQLGLPD 79

Query: 175 IQSTLNPNLPPWLFAVEEFNPGKLFLRQDLSRSVFDLLPVNFPKALDLSSFRVSELSKVY 354
            ++   PN   WL  +EE   G + L   L+   F  LP +FPK  D S  RV EL + Y
Sbjct: 80  SRAQTTPN--SWLIKIEEDPSGVIRLINPLTTFKFRHLPPDFPKTFDFSGLRVFELGQEY 137

Query: 355 TL 360
            L
Sbjct: 138 VL 139


>ref|XP_002278304.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 394

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 45/126 (35%), Positives = 57/126 (45%), Gaps = 6/126 (4%)
 Frame = +1

Query: 1   DILNFRAACNTWRNLTPFSLLNGKKTMLSPILP-----YHLYF-KHSIFFYGNSLFLVAS 162
           D+L  R+ C++W    P S L+   +   PILP     + LY  + +I   G        
Sbjct: 24  DLLCLRSVCSSWHACVP-SRLHPLPSRF-PILPTNGTSWGLYLSRRTILCLG-------- 73

Query: 163 SFYLIQSTLNPNLPPWLFAVEEFNPGKLFLRQDLSRSVFDLLPVNFPKALDLSSFRVSEL 342
              L +S   P +  WL  VEE  P    L   LS   F  LP NFPK  D S FRVSEL
Sbjct: 74  ---LPESHCQPTISSWLIKVEEDVPDMAHLVNPLSTFQFKHLPPNFPKTFDFSRFRVSEL 130

Query: 343 SKVYTL 360
            + Y L
Sbjct: 131 GQEYVL 136


>ref|XP_002278547.2| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 405

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 44/129 (34%), Positives = 58/129 (44%), Gaps = 9/129 (6%)
 Frame = +1

Query: 1   DILNFRAACNTWRNLTPFSLLNGKKTMLSPILPYHLYFKHSIFFYGNSLFLVASSFYLIQ 180
           D L+FR  C++W +    +    K  +LS  LPY +    ++            SF LI+
Sbjct: 28  DFLHFRGVCSSWMSSVSPTFPR-KNPILSLKLPYPIASNANLNICDPDTRNPHGSFSLIE 86

Query: 181 STLNPNLP---------PWLFAVEEFNPGKLFLRQDLSRSVFDLLPVNFPKALDLSSFRV 333
           STL    P           L  +EE  PGK  L   LSR     LP NFPK L+  +FRV
Sbjct: 87  STLYYLQPLRQTPDSKEALLVKLEEPKPGKGRLMDTLSRCAIQHLPKNFPKVLNTLNFRV 146

Query: 334 SELSKVYTL 360
            E+ K Y L
Sbjct: 147 REVGKAYGL 155


>ref|XP_002313690.1| hypothetical protein POPTR_0009s14200g [Populus trichocarpa]
           gi|222850098|gb|EEE87645.1| hypothetical protein
           POPTR_0009s14200g [Populus trichocarpa]
          Length = 410

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 46/128 (35%), Positives = 59/128 (46%), Gaps = 8/128 (6%)
 Frame = +1

Query: 1   DILNFRAACNTWRNLTPFSLLNGKKTMLSP----ILPY----HLYFKHSIFFYGNSLFLV 156
           D+L FR+ CN+WR+  P      K   LS     ILP     H  F  S+F    S+FL+
Sbjct: 24  DLLRFRSVCNSWRSSIP-----PKSPRLSSNTFKILPNDGISHTSFGFSLF--KRSIFLI 76

Query: 157 ASSFYLIQSTLNPNLPPWLFAVEEFNPGKLFLRQDLSRSVFDLLPVNFPKALDLSSFRVS 336
                L  S    +L  WL  +EE  PGK  L   LSR     L  + P+ LDL + R+ 
Sbjct: 77  G----LPNSHNQTDLQGWLVKIEEDVPGKKHLFDPLSRCRSTSLHHSLPRVLDLMNLRIR 132

Query: 337 ELSKVYTL 360
           EL   Y L
Sbjct: 133 ELGHEYVL 140


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