BLASTX nr result

ID: Achyranthes23_contig00030576 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00030576
         (371 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABJ99599.1| NBS-LRR type resistance protein [Beta vulgaris]         78   1e-12
ref|XP_006382153.1| hypothetical protein POPTR_0006s28900g [Popu...    59   9e-07
ref|XP_002336950.1| predicted protein [Populus trichocarpa]            55   1e-05

>gb|ABJ99599.1| NBS-LRR type resistance protein [Beta vulgaris]
          Length = 1067

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 52/132 (39%), Positives = 70/132 (53%), Gaps = 16/132 (12%)
 Frame = +2

Query: 8    KLKGWRRGTEGKLVPCF--PRLKSLIIWNCPELTCIPHCPTVEDLKLVNFN--------- 154
            KLKGW +  +G+  P    P L  L I++C ELTC   CP++EDL+L+ FN         
Sbjct: 867  KLKGWMKEVKGRSKPPLQLPSLSKLQIFDCLELTCTIICPSLEDLELIKFNKEMRIIMNS 926

Query: 155  -----STLSLSDLRGKSLENIASSSRSSNGMAKIKKVVISEVAWLNLLPMEKFQCLERLE 319
                 S+ S S       ++ +SSS S   + K+KKV I  VAWL+ + ME  QCLE L 
Sbjct: 927  RKSGESSTSFSSHSSTPEDSTSSSSCSDILVPKLKKVGIDNVAWLDSVSMESLQCLEVLY 986

Query: 320  IWCDKELETLGE 355
            I  + EL  L E
Sbjct: 987  IKDNGELVDLPE 998


>ref|XP_006382153.1| hypothetical protein POPTR_0006s28900g [Populus trichocarpa]
            gi|550337308|gb|ERP59950.1| hypothetical protein
            POPTR_0006s28900g [Populus trichocarpa]
          Length = 1047

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 42/120 (35%), Positives = 69/120 (57%), Gaps = 6/120 (5%)
 Frame = +2

Query: 8    KLKGWRRGTEGKLVPCFPRLKSLIIWNCPELTCIPHCPTV-EDLKLVNFNSTLSLSDLRG 184
            +LKGW +  +G  + CFPRL SL I++C  LT +P  PT+ EDL+L  F+S++ L     
Sbjct: 832  RLKGWWK-KKGLRMLCFPRLSSLTIYDCSNLTSMPLFPTLDEDLQLA-FSSSMPLQQTM- 888

Query: 185  KSLENIASSSRSS--NGMAKIKKVVISEVAWLNLLP---MEKFQCLERLEIWCDKELETL 349
            K    ++SSS SS    ++K+K++ +  +  +  LP   ++    L+ L IW    L++L
Sbjct: 889  KMTSPVSSSSSSSFIRPLSKLKRLYMYSIDDMESLPEVGLKNLSSLQSLSIWGCSRLKSL 948


>ref|XP_002336950.1| predicted protein [Populus trichocarpa]
          Length = 328

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 43/134 (32%), Positives = 70/134 (52%), Gaps = 20/134 (14%)
 Frame = +2

Query: 8   KLKGWRRGT--------------EGKLVPCFPRLKSLIIWNCPELTCIPHCPTV-EDLKL 142
           +LKGW + +              EG  + CFPRL SL I++C  LT +P  PT+ EDL+L
Sbjct: 98  RLKGWWKKSRDEMNDDSDESTIAEGLRMLCFPRLSSLTIYDCSNLTSMPLFPTLDEDLQL 157

Query: 143 VNFNSTLSLSDLRGKSLENIASSSRSS--NGMAKIKKVVISEVAWLNLLP---MEKFQCL 307
             F+S++ L     K    ++SSS SS    ++K+K++ +  +  +  LP   ++    L
Sbjct: 158 A-FSSSMPLQQTM-KMTSPVSSSSSSSFIRPLSKLKRLYMYSIDDMESLPEVGLKNLSSL 215

Query: 308 ERLEIWCDKELETL 349
           + L IW    L++L
Sbjct: 216 QSLSIWGCSRLKSL 229


Top