BLASTX nr result

ID: Achyranthes23_contig00030006 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00030006
         (1223 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004309343.1| PREDICTED: uncharacterized protein LOC101295...    60   1e-06
ref|XP_004305406.1| PREDICTED: putative ribonuclease H protein A...    60   1e-06
ref|XP_002317250.1| predicted protein [Populus trichocarpa]            60   1e-06
ref|XP_004308482.1| PREDICTED: putative ribonuclease H protein A...    60   2e-06
emb|CAN75081.1| hypothetical protein VITISV_027743 [Vitis vinifera]    60   2e-06
ref|XP_004293076.1| PREDICTED: putative ribonuclease H protein A...    59   5e-06
ref|XP_002304990.2| hypothetical protein POPTR_0004s03265g [Popu...    58   9e-06

>ref|XP_004309343.1| PREDICTED: uncharacterized protein LOC101295189, partial [Fragaria
           vesca subsp. vesca]
          Length = 222

 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 56/155 (36%), Positives = 80/155 (51%), Gaps = 2/155 (1%)
 Frame = -3

Query: 735 LNFDGSDINQQKKGGAGCIIRNKDKELVIAAAYNLDNCTQLNVAIVEALALRNGLNLAKN 556
           +NFDGS       GG   +IR  +   ++AA+ N    T   +++ EAL+LRN L  AK 
Sbjct: 66  INFDGSVWRNSAAGGF--VIRTPNGNPLVAASSNFGITT---ISVAEALSLRNSLICAKE 120

Query: 555 YNIKLDMIEGDSQEVIDRVRGKEKNSKVTFLNDLISEIREALFDQSIDPISQLQLIGREA 376
             +    +EGDS+ VID V G    +    +  L+ EIR      S D IS  + I REA
Sbjct: 121 RGLSRVEVEGDSKLVIDAVNGIA--ASPWRILKLVQEIR--CLRNSFDFIS-FKHIFREA 175

Query: 375 NKVADELASIGAKLGVGR--EKIYDRDAVLTTKLD 277
           N VA+ +A++G K+G  R  E+    +A LT   D
Sbjct: 176 NFVANAVANVGHKVGDVRFWEECVPPEASLTLFFD 210


>ref|XP_004305406.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 399

 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 50/143 (34%), Positives = 72/143 (50%)
 Frame = -3

Query: 747 DFHTLNFDGSDINQQKKGGAGCIIRNKDKELVIAAAYNLDNCTQLNVAIVEALALRNGLN 568
           +F  +NFDGS   Q +    G + RN D  +++AAA  L + T   +   EA ALR+ L 
Sbjct: 235 NFIKINFDGSV--QGRSAVGGFVFRNSDGNVILAAAKGLGSTT---IPTAEATALRDNLV 289

Query: 567 LAKNYNIKLDMIEGDSQEVIDRVRGKEKNSKVTFLNDLISEIREALFDQSIDPISQLQLI 388
            A++       +EGDS+ VID + G  K S    L  ++ +IR      S    +    +
Sbjct: 290 KARDRGYMNVQVEGDSKLVIDAING--KLSPPWRLQKIVQDIRTIATSFSSVCFNH---V 344

Query: 387 GREANKVADELASIGAKLGVGRE 319
            REAN VAD  A+ G +L  GRE
Sbjct: 345 YREANFVADAFANEGHQLPNGRE 367


>ref|XP_002317250.1| predicted protein [Populus trichocarpa]
          Length = 171

 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 44/140 (31%), Positives = 67/140 (47%), Gaps = 6/140 (4%)
 Frame = -3

Query: 735 LNFDGSDINQQKKGGAGCIIRNKDKELVIAAAYNLDNCTQLNVAIVEALALRNGLNLAKN 556
           LNFDGS  +   K   G + RN + E ++  A ++   T +   I E  ALR GL L   
Sbjct: 16  LNFDGSCKDSAGKASIGGVFRNHEAEFLLGYAESIGRTTSM---IAELAALRRGLELVLE 72

Query: 555 YNIKLDMIEGDSQEVID------RVRGKEKNSKVTFLNDLISEIREALFDQSIDPISQLQ 394
                  +EGDS+ ++D       VR KE   +V+++N +I E++  L            
Sbjct: 73  NGWGNVWLEGDSKSLVDIIVKRKLVRCKEAQRQVSYINLIIPELKNCLVTH--------- 123

Query: 393 LIGREANKVADELASIGAKL 334
            + RE N+ AD+LA I  +L
Sbjct: 124 -VFREGNRAADKLARIAYQL 142


>ref|XP_004308482.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 196

 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 48/131 (36%), Positives = 70/131 (53%)
 Frame = -3

Query: 735 LNFDGSDINQQKKGGAGCIIRNKDKELVIAAAYNLDNCTQLNVAIVEALALRNGLNLAKN 556
           +NF+GS  +    GG   IIR +  + + AA +NL   T   V + EA+ALRN L  AKN
Sbjct: 40  INFNGSVRSNSAAGGF--IIRTETGKSLAAACFNLGTTT---VPVAEAIALRNSLIYAKN 94

Query: 555 YNIKLDMIEGDSQEVIDRVRGKEKNSKVTFLNDLISEIREALFDQSIDPISQLQLIGREA 376
             +    +EGDS+ VID V G   +S    L  L+ +I+      S     + + + REA
Sbjct: 95  QGLSKIEVEGDSKLVIDVVNG--VSSPPWKLLKLVQDIKAL---SSSFEFVKFKYVFREA 149

Query: 375 NKVADELASIG 343
           N VA+ LA++G
Sbjct: 150 NFVANALANLG 160


>emb|CAN75081.1| hypothetical protein VITISV_027743 [Vitis vinifera]
          Length = 395

 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 44/139 (31%), Positives = 66/139 (47%), Gaps = 6/139 (4%)
 Frame = -3

Query: 735 LNFDGSDINQQKKGGAGCIIRNKDKELVIAAAYNLDNCTQLNVAIVEALALRNGLNLAKN 556
           LNFDGS   +  + G G ++R+     + A A  LD    L   + E  AL  GL LA  
Sbjct: 237 LNFDGSFKGRTGRAGGGGLLRDAQGSFIAAFATPLDTSNSL---MAEIGALEGGLRLALK 293

Query: 555 YNIKLDMIEGDSQEVIDRVRGK------EKNSKVTFLNDLISEIREALFDQSIDPISQLQ 394
            N++  +IEGDS+  I+ + GK      E+ S +T + +L+   +E              
Sbjct: 294 LNVERILIEGDSKITIEMLSGKREXTXEEEKSLMTHIRELLQGFQEVTARHEF------- 346

Query: 393 LIGREANKVADELASIGAK 337
              REAN+ AD LA+I  +
Sbjct: 347 ---REANRPADHLANIATQ 362


>ref|XP_004293076.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 487

 Score = 58.5 bits (140), Expect = 5e-06
 Identities = 48/143 (33%), Positives = 71/143 (49%)
 Frame = -3

Query: 747 DFHTLNFDGSDINQQKKGGAGCIIRNKDKELVIAAAYNLDNCTQLNVAIVEALALRNGLN 568
           +F  +NFDGS   Q +    G + RN D  +++AAA  L + T   +   EA ALR+ L 
Sbjct: 327 NFIKINFDGSV--QGRSAAGGFVFRNSDGNVILAAAKGLGSTT---IPTAEATALRDSLV 381

Query: 567 LAKNYNIKLDMIEGDSQEVIDRVRGKEKNSKVTFLNDLISEIREALFDQSIDPISQLQLI 388
            A++       +EGDS+ VID + G  K S    L  ++ +IR      S    +    +
Sbjct: 382 KARDRGYMNVQVEGDSKLVIDAING--KLSPPWRLQKIVQDIRTIATSFSSVCFNH---V 436

Query: 387 GREANKVADELASIGAKLGVGRE 319
            REAN +AD  A+ G +L  G E
Sbjct: 437 YREANFMADAFANEGHQLPNGHE 459


>ref|XP_002304990.2| hypothetical protein POPTR_0004s03265g [Populus trichocarpa]
           gi|550340224|gb|EEE85501.2| hypothetical protein
           POPTR_0004s03265g [Populus trichocarpa]
          Length = 202

 Score = 57.8 bits (138), Expect = 9e-06
 Identities = 43/140 (30%), Positives = 65/140 (46%), Gaps = 6/140 (4%)
 Frame = -3

Query: 735 LNFDGSDINQQKKGGAGCIIRNKDKELVIAAAYNLDNCTQLNVAIVEALALRNGLNLAKN 556
           LNFDGS      K   G + RN + E ++  A  +   T     I E  ALR GL L   
Sbjct: 45  LNFDGSCKGTAGKASIGGVFRNHEAEFLLGYAEPIGGTTS---TIAELAALRRGLELVLE 101

Query: 555 YNIKLDMIEGDSQEVID------RVRGKEKNSKVTFLNDLISEIREALFDQSIDPISQLQ 394
                  +EGDS+ ++D      +VR KE   +V+ +N ++ E++  +            
Sbjct: 102 NGWSNVWLEGDSKSLVDIIVKRKQVRCKEAQRQVSHINLIMPELQNCVVTH--------- 152

Query: 393 LIGREANKVADELASIGAKL 334
            + RE N+ AD+LA IG +L
Sbjct: 153 -VFREGNRAADKLARIGHQL 171


Top