BLASTX nr result
ID: Achyranthes23_contig00029753
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Achyranthes23_contig00029753
(352 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB60119.1| Replication factor C subunit 4 [Morus notabilis] 84 2e-14
ref|XP_002520330.1| replication factor C / DNA polymerase III ga... 77 3e-14
ref|XP_002307456.1| replication factor C 37 kDa family protein [... 74 6e-14
ref|XP_004290901.1| PREDICTED: replication factor C subunit 4-li... 74 7e-14
ref|XP_006829310.1| hypothetical protein AMTR_s00202p00012570, p... 74 3e-13
ref|XP_004250308.1| PREDICTED: replication factor C subunit 4-li... 71 3e-13
ref|XP_003602047.1| Replication factor C subunit [Medicago trunc... 79 5e-13
ref|XP_003634411.1| PREDICTED: replication factor C subunit 4 [V... 79 6e-13
ref|XP_002285875.1| PREDICTED: replication factor C subunit 4 is... 79 6e-13
ref|XP_002285874.1| PREDICTED: replication factor C subunit 4 is... 79 6e-13
emb|CAN83520.1| hypothetical protein VITISV_019805 [Vitis vinifera] 79 6e-13
ref|XP_006351139.1| PREDICTED: replication factor C subunit 2-li... 70 1e-12
ref|XP_003523427.1| PREDICTED: replication factor C subunit 4-li... 78 1e-12
ref|XP_002468414.1| hypothetical protein SORBIDRAFT_01g045530 [S... 73 2e-12
ref|XP_003578842.1| PREDICTED: replication factor C subunit 4-li... 72 2e-12
ref|XP_006664392.1| PREDICTED: replication factor C subunit 2-li... 71 2e-12
ref|NP_001066296.2| Os12g0176500 [Oryza sativa Japonica Group] g... 71 2e-12
ref|XP_006434256.1| hypothetical protein CICLE_v10001485mg [Citr... 74 2e-12
ref|NP_001148581.1| replication factor C subunit 2 [Zea mays] gi... 73 2e-12
ref|XP_004502518.1| PREDICTED: replication factor C subunit 4-li... 77 2e-12
>gb|EXB60119.1| Replication factor C subunit 4 [Morus notabilis]
Length = 309
Score = 84.3 bits (207), Expect = 2e-14
Identities = 38/48 (79%), Positives = 44/48 (91%)
Frame = +1
Query: 46 DLSDEQKARILKKLGEVDKCLIDGADEYLQLLDVAGNTMRACCNLAPD 189
DLSDEQKARI +KLGE DKCL+DGADEYLQLLDV+GNTMRA CN++ +
Sbjct: 259 DLSDEQKARICRKLGEADKCLVDGADEYLQLLDVSGNTMRALCNMSEE 306
>ref|XP_002520330.1| replication factor C / DNA polymerase III gamma-tau subunit,
putative [Ricinus communis] gi|223540549|gb|EEF42116.1|
replication factor C / DNA polymerase III gamma-tau
subunit, putative [Ricinus communis]
Length = 342
Score = 77.4 bits (189), Expect(2) = 3e-14
Identities = 37/50 (74%), Positives = 41/50 (82%)
Frame = +1
Query: 46 DLSDEQKARILKKLGEVDKCLIDGADEYLQLLDVAGNTMRACCNLAPDSF 195
D+SDEQKA+I K LG DKCL+DGADEYLQLLDVA NTMRA CN+ P F
Sbjct: 290 DISDEQKAQICKSLGAADKCLVDGADEYLQLLDVASNTMRALCNM-PQEF 338
Score = 26.2 bits (56), Expect(2) = 3e-14
Identities = 10/14 (71%), Positives = 13/14 (92%)
Frame = +3
Query: 3 VISEGYPVSQMISQ 44
+I+EGYPVSQM+ Q
Sbjct: 267 IIAEGYPVSQMLVQ 280
>ref|XP_002307456.1| replication factor C 37 kDa family protein [Populus trichocarpa]
gi|222856905|gb|EEE94452.1| replication factor C 37 kDa
family protein [Populus trichocarpa]
Length = 342
Score = 74.3 bits (181), Expect(2) = 6e-14
Identities = 35/52 (67%), Positives = 40/52 (76%)
Frame = +1
Query: 40 LSDLSDEQKARILKKLGEVDKCLIDGADEYLQLLDVAGNTMRACCNLAPDSF 195
+ D+SDEQKARI K L DKCL+DGADEYLQLLDV NTMR+ CN+ P F
Sbjct: 288 VDDISDEQKARICKSLATADKCLVDGADEYLQLLDVVSNTMRSLCNM-PQEF 338
Score = 28.5 bits (62), Expect(2) = 6e-14
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +3
Query: 3 VISEGYPVSQMISQ*F 50
VI+EGYPVSQM++Q F
Sbjct: 267 VIAEGYPVSQMLAQLF 282
>ref|XP_004290901.1| PREDICTED: replication factor C subunit 4-like [Fragaria vesca
subsp. vesca]
Length = 339
Score = 73.6 bits (179), Expect(2) = 7e-14
Identities = 35/48 (72%), Positives = 40/48 (83%)
Frame = +1
Query: 46 DLSDEQKARILKKLGEVDKCLIDGADEYLQLLDVAGNTMRACCNLAPD 189
D+SDEQ ARI KKLGE DK L+DG+DEYLQLLDVA +TMRA CN+ D
Sbjct: 290 DISDEQIARICKKLGEADKRLVDGSDEYLQLLDVASSTMRAICNMQED 337
Score = 28.9 bits (63), Expect(2) = 7e-14
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +3
Query: 3 VISEGYPVSQMISQ*F 50
VI+EGYPVSQM SQ F
Sbjct: 267 VIAEGYPVSQMFSQLF 282
>ref|XP_006829310.1| hypothetical protein AMTR_s00202p00012570, partial [Amborella
trichopoda] gi|548834330|gb|ERM96726.1| hypothetical
protein AMTR_s00202p00012570, partial [Amborella
trichopoda]
Length = 341
Score = 73.9 bits (180), Expect(2) = 3e-13
Identities = 36/51 (70%), Positives = 41/51 (80%)
Frame = +1
Query: 43 SDLSDEQKARILKKLGEVDKCLIDGADEYLQLLDVAGNTMRACCNLAPDSF 195
+D+SDEQKARI ++ E DK LIDGADEYLQLLDVA NTMRA CN+ P F
Sbjct: 290 TDISDEQKARIFNRIAEADKYLIDGADEYLQLLDVASNTMRAICNM-PQEF 339
Score = 26.2 bits (56), Expect(2) = 3e-13
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +3
Query: 3 VISEGYPVSQMISQ*F 50
+ +EGYPVSQ++SQ F
Sbjct: 268 ITAEGYPVSQLLSQLF 283
>ref|XP_004250308.1| PREDICTED: replication factor C subunit 4-like [Solanum
lycopersicum]
Length = 339
Score = 71.2 bits (173), Expect(2) = 3e-13
Identities = 33/48 (68%), Positives = 39/48 (81%)
Frame = +1
Query: 46 DLSDEQKARILKKLGEVDKCLIDGADEYLQLLDVAGNTMRACCNLAPD 189
D+SDEQKARI KK E DKCL+DGADEYLQLL+VA +TM+A N+ D
Sbjct: 289 DISDEQKARICKKFAEADKCLVDGADEYLQLLNVASSTMQALSNMPQD 336
Score = 28.9 bits (63), Expect(2) = 3e-13
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = +3
Query: 3 VISEGYPVSQMISQ 44
VI+EGYPVSQM+SQ
Sbjct: 266 VIAEGYPVSQMLSQ 279
>ref|XP_003602047.1| Replication factor C subunit [Medicago truncatula]
gi|357520353|ref|XP_003630465.1| Replication factor C
subunit [Medicago truncatula]
gi|217073528|gb|ACJ85124.1| unknown [Medicago
truncatula] gi|355491095|gb|AES72298.1| Replication
factor C subunit [Medicago truncatula]
gi|355524487|gb|AET04941.1| Replication factor C subunit
[Medicago truncatula] gi|388492316|gb|AFK34224.1|
unknown [Medicago truncatula]
Length = 339
Score = 79.3 bits (194), Expect = 5e-13
Identities = 37/51 (72%), Positives = 44/51 (86%)
Frame = +1
Query: 43 SDLSDEQKARILKKLGEVDKCLIDGADEYLQLLDVAGNTMRACCNLAPDSF 195
+D+SDEQKARI KKLGE DKCL+DGADEYLQLLDV NT++A CN+ P+ F
Sbjct: 289 NDISDEQKARISKKLGEADKCLVDGADEYLQLLDVVSNTIQALCNM-PEGF 338
>ref|XP_003634411.1| PREDICTED: replication factor C subunit 4 [Vitis vinifera]
Length = 334
Score = 79.0 bits (193), Expect = 6e-13
Identities = 37/51 (72%), Positives = 43/51 (84%)
Frame = +1
Query: 43 SDLSDEQKARILKKLGEVDKCLIDGADEYLQLLDVAGNTMRACCNLAPDSF 195
+D+SDEQKARI K+L E DKCL+DGADEYLQLLDVA N MRA CN+ P+ F
Sbjct: 281 ADISDEQKARICKRLAEADKCLVDGADEYLQLLDVASNAMRALCNM-PEEF 330
>ref|XP_002285875.1| PREDICTED: replication factor C subunit 4 isoform 2 [Vitis
vinifera]
Length = 329
Score = 79.0 bits (193), Expect = 6e-13
Identities = 37/51 (72%), Positives = 43/51 (84%)
Frame = +1
Query: 43 SDLSDEQKARILKKLGEVDKCLIDGADEYLQLLDVAGNTMRACCNLAPDSF 195
+D+SDEQKARI K+L E DKCL+DGADEYLQLLDVA N MRA CN+ P+ F
Sbjct: 276 ADISDEQKARICKRLAEADKCLVDGADEYLQLLDVASNAMRALCNM-PEEF 325
>ref|XP_002285874.1| PREDICTED: replication factor C subunit 4 isoform 1 [Vitis
vinifera] gi|302141781|emb|CBI18984.3| unnamed protein
product [Vitis vinifera]
Length = 341
Score = 79.0 bits (193), Expect = 6e-13
Identities = 37/51 (72%), Positives = 43/51 (84%)
Frame = +1
Query: 43 SDLSDEQKARILKKLGEVDKCLIDGADEYLQLLDVAGNTMRACCNLAPDSF 195
+D+SDEQKARI K+L E DKCL+DGADEYLQLLDVA N MRA CN+ P+ F
Sbjct: 288 ADISDEQKARICKRLAEADKCLVDGADEYLQLLDVASNAMRALCNM-PEEF 337
>emb|CAN83520.1| hypothetical protein VITISV_019805 [Vitis vinifera]
Length = 341
Score = 79.0 bits (193), Expect = 6e-13
Identities = 37/51 (72%), Positives = 43/51 (84%)
Frame = +1
Query: 43 SDLSDEQKARILKKLGEVDKCLIDGADEYLQLLDVAGNTMRACCNLAPDSF 195
+D+SDEQKARI K+L E DKCL+DGADEYLQLLDVA N MRA CN+ P+ F
Sbjct: 288 ADISDEQKARICKRLAEADKCLVDGADEYLQLLDVASNAMRALCNM-PEEF 337
>ref|XP_006351139.1| PREDICTED: replication factor C subunit 2-like [Solanum tuberosum]
Length = 339
Score = 69.7 bits (169), Expect(2) = 1e-12
Identities = 32/48 (66%), Positives = 38/48 (79%)
Frame = +1
Query: 46 DLSDEQKARILKKLGEVDKCLIDGADEYLQLLDVAGNTMRACCNLAPD 189
D+SDEQKARI KK E DKCL+DGADEYLQLL+V +TM+A N+ D
Sbjct: 289 DISDEQKARICKKFAEADKCLVDGADEYLQLLNVVSSTMQALSNMPQD 336
Score = 28.9 bits (63), Expect(2) = 1e-12
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = +3
Query: 3 VISEGYPVSQMISQ 44
VI+EGYPVSQM+SQ
Sbjct: 266 VIAEGYPVSQMLSQ 279
>ref|XP_003523427.1| PREDICTED: replication factor C subunit 4-like isoformX1 [Glycine
max] gi|571452162|ref|XP_006578961.1| PREDICTED:
replication factor C subunit 4-like isoform X2 [Glycine
max] gi|571452164|ref|XP_006578962.1| PREDICTED:
replication factor C subunit 4-like isoform X3 [Glycine
max]
Length = 342
Score = 78.2 bits (191), Expect = 1e-12
Identities = 38/51 (74%), Positives = 44/51 (86%)
Frame = +1
Query: 43 SDLSDEQKARILKKLGEVDKCLIDGADEYLQLLDVAGNTMRACCNLAPDSF 195
+DLSDEQKARI KKLGE DKCL+DGADEYLQLLDV NTM+A N+ P++F
Sbjct: 289 NDLSDEQKARISKKLGEADKCLVDGADEYLQLLDVVSNTMKAFSNM-PETF 338
>ref|XP_002468414.1| hypothetical protein SORBIDRAFT_01g045530 [Sorghum bicolor]
gi|241922268|gb|EER95412.1| hypothetical protein
SORBIDRAFT_01g045530 [Sorghum bicolor]
Length = 339
Score = 73.2 bits (178), Expect(2) = 2e-12
Identities = 34/48 (70%), Positives = 39/48 (81%)
Frame = +1
Query: 37 SLSDLSDEQKARILKKLGEVDKCLIDGADEYLQLLDVAGNTMRACCNL 180
S D+ D+QKARI KKLGE DKCL+DGADEYLQLLDVA T+RA N+
Sbjct: 286 SADDIQDDQKARICKKLGETDKCLVDGADEYLQLLDVASETIRALFNM 333
Score = 24.6 bits (52), Expect(2) = 2e-12
Identities = 8/14 (57%), Positives = 14/14 (100%)
Frame = +3
Query: 3 VISEGYPVSQMISQ 44
+I++GYPVSQ+++Q
Sbjct: 266 IIADGYPVSQLMAQ 279
>ref|XP_003578842.1| PREDICTED: replication factor C subunit 4-like [Brachypodium
distachyon]
Length = 339
Score = 71.6 bits (174), Expect(2) = 2e-12
Identities = 33/45 (73%), Positives = 38/45 (84%)
Frame = +1
Query: 46 DLSDEQKARILKKLGEVDKCLIDGADEYLQLLDVAGNTMRACCNL 180
D+ DEQKARI KKLGE DKCL+DGADEYLQLLD+A T+RA N+
Sbjct: 289 DIPDEQKARICKKLGEADKCLVDGADEYLQLLDMASETIRALFNI 333
Score = 26.2 bits (56), Expect(2) = 2e-12
Identities = 9/14 (64%), Positives = 14/14 (100%)
Frame = +3
Query: 3 VISEGYPVSQMISQ 44
+I++GYPVSQ++SQ
Sbjct: 266 IIADGYPVSQLLSQ 279
>ref|XP_006664392.1| PREDICTED: replication factor C subunit 2-like [Oryza brachyantha]
Length = 339
Score = 70.9 bits (172), Expect(2) = 2e-12
Identities = 33/41 (80%), Positives = 36/41 (87%)
Frame = +1
Query: 46 DLSDEQKARILKKLGEVDKCLIDGADEYLQLLDVAGNTMRA 168
D+ DEQKARI KKLGE DKCL+DGADEYLQLLDVA T+RA
Sbjct: 289 DIPDEQKARICKKLGEADKCLVDGADEYLQLLDVASETIRA 329
Score = 26.9 bits (58), Expect(2) = 2e-12
Identities = 10/14 (71%), Positives = 14/14 (100%)
Frame = +3
Query: 3 VISEGYPVSQMISQ 44
+I++GYPVSQ+ISQ
Sbjct: 266 IIADGYPVSQLISQ 279
>ref|NP_001066296.2| Os12g0176500 [Oryza sativa Japonica Group]
gi|75173107|sp|Q9FXM3.1|RFC2_ORYSJ RecName:
Full=Replication factor C subunit 2; Short=OsRFC2;
AltName: Full=Activator 1 subunit 2
gi|10798806|dbj|BAB16441.1| replication factor C 37 kDa
subunit [Oryza sativa Japonica Group]
gi|77553810|gb|ABA96606.1| Activator 1 37 kDa subunit,
putative, expressed [Oryza sativa Japonica Group]
gi|125535960|gb|EAY82448.1| hypothetical protein
OsI_37665 [Oryza sativa Indica Group]
gi|125578677|gb|EAZ19823.1| hypothetical protein
OsJ_35406 [Oryza sativa Japonica Group]
gi|215737297|dbj|BAG96226.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|255670097|dbj|BAF29315.2| Os12g0176500 [Oryza sativa
Japonica Group]
Length = 339
Score = 70.9 bits (172), Expect(2) = 2e-12
Identities = 33/41 (80%), Positives = 36/41 (87%)
Frame = +1
Query: 46 DLSDEQKARILKKLGEVDKCLIDGADEYLQLLDVAGNTMRA 168
D+ DEQKARI KKLGE DKCL+DGADEYLQLLDVA T+RA
Sbjct: 289 DIPDEQKARICKKLGEADKCLVDGADEYLQLLDVASETIRA 329
Score = 26.9 bits (58), Expect(2) = 2e-12
Identities = 10/14 (71%), Positives = 14/14 (100%)
Frame = +3
Query: 3 VISEGYPVSQMISQ 44
+I++GYPVSQ+ISQ
Sbjct: 266 IIADGYPVSQLISQ 279
>ref|XP_006434256.1| hypothetical protein CICLE_v10001485mg [Citrus clementina]
gi|557536378|gb|ESR47496.1| hypothetical protein
CICLE_v10001485mg [Citrus clementina]
Length = 382
Score = 73.6 bits (179), Expect(2) = 2e-12
Identities = 35/50 (70%), Positives = 42/50 (84%)
Frame = +1
Query: 46 DLSDEQKARILKKLGEVDKCLIDGADEYLQLLDVAGNTMRACCNLAPDSF 195
D+SDEQ+ARI K L +VDKCL+DGADEYLQLLDVA N +RA CN+ P+ F
Sbjct: 330 DISDEQQARICKCLAKVDKCLVDGADEYLQLLDVASNVIRAVCNM-PEEF 378
Score = 23.9 bits (50), Expect(2) = 2e-12
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +3
Query: 3 VISEGYPVSQMISQ*F 50
+I+EGYP S ++SQ F
Sbjct: 307 IIAEGYPASLLLSQLF 322
>ref|NP_001148581.1| replication factor C subunit 2 [Zea mays]
gi|195620566|gb|ACG32113.1| replication factor C subunit
2 [Zea mays]
Length = 339
Score = 72.8 bits (177), Expect(2) = 2e-12
Identities = 34/48 (70%), Positives = 39/48 (81%)
Frame = +1
Query: 37 SLSDLSDEQKARILKKLGEVDKCLIDGADEYLQLLDVAGNTMRACCNL 180
S D+ D+QKARI KKLGE DKCL+DGADEYLQLLDVA T+RA N+
Sbjct: 286 SADDIPDDQKARICKKLGETDKCLVDGADEYLQLLDVASETIRALFNM 333
Score = 24.6 bits (52), Expect(2) = 2e-12
Identities = 8/14 (57%), Positives = 14/14 (100%)
Frame = +3
Query: 3 VISEGYPVSQMISQ 44
+I++GYPVSQ+++Q
Sbjct: 266 IIADGYPVSQLMAQ 279
>ref|XP_004502518.1| PREDICTED: replication factor C subunit 4-like [Cicer arietinum]
Length = 341
Score = 77.0 bits (188), Expect = 2e-12
Identities = 37/51 (72%), Positives = 43/51 (84%)
Frame = +1
Query: 43 SDLSDEQKARILKKLGEVDKCLIDGADEYLQLLDVAGNTMRACCNLAPDSF 195
+D+SDEQKARI KKLGE DKCL+DGADEYLQLL V NT++A CNL P+ F
Sbjct: 289 NDISDEQKARISKKLGEADKCLVDGADEYLQLLAVVSNTIQALCNL-PEGF 338