BLASTX nr result
ID: Achyranthes23_contig00029571
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Achyranthes23_contig00029571
(216 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q08183.1|RBS3_MESCR RecName: Full=Ribulose bisphosphate carbo... 78 1e-12
gb|AAA33037.1| ribulose 1,5-bisphosphate carboxylase/oxygenase s... 78 1e-12
sp|Q08184.1|RBS4_MESCR RecName: Full=Ribulose bisphosphate carbo... 78 1e-12
sp|P24007.1|RBS_PYRPY RecName: Full=Ribulose bisphosphate carbox... 77 2e-12
gb|ABK96567.1| unknown [Populus trichocarpa x Populus deltoides] 76 5e-12
ref|XP_002329284.1| predicted protein [Populus trichocarpa] gi|5... 76 5e-12
gb|ABK96590.1| unknown [Populus trichocarpa x Populus deltoides] 76 5e-12
ref|XP_004299075.1| PREDICTED: ribulose bisphosphate carboxylase... 75 9e-12
gb|AAA33866.1| ribulose 1,5-bisphosphate carboxylase small subun... 75 1e-11
gb|AAA33035.1| ribulose-1-5-bisphosphate carboxylase [Mesembryan... 75 1e-11
sp|P16032.2|RBS1_MESCR RecName: Full=Ribulose bisphosphate carbo... 75 1e-11
sp|Q9XGX4.1|RBS3_AMAHP RecName: Full=Ribulose bisphosphate carbo... 74 2e-11
sp|Q9XGX5.1|RBS2_AMAHP RecName: Full=Ribulose bisphosphate carbo... 74 2e-11
gb|AAA33036.1| ribulose 1,5-bisphosphate carboxylase/oxygenase s... 73 3e-11
sp|Q04450.1|RBS2_MESCR RecName: Full=Ribulose bisphosphate carbo... 73 3e-11
dbj|BAI53118.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ... 73 3e-11
sp|P31333.2|RBS_GOSHI RecName: Full=Ribulose bisphosphate carbox... 72 6e-11
gb|AFS41772.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 72 6e-11
gb|AFS41771.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 72 6e-11
gb|AFS41770.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 72 6e-11
>sp|Q08183.1|RBS3_MESCR RecName: Full=Ribulose bisphosphate carboxylase small chain 3,
chloroplastic; Short=RuBisCO small subunit 3; Flags:
Precursor gi|436487|gb|AAA03695.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Mesembryanthemum crystallinum]
Length = 183
Score = 78.2 bits (191), Expect = 1e-12
Identities = 35/37 (94%), Positives = 36/37 (97%)
Frame = +3
Query: 105 PFNGLKSTSAFPVTRKNNDITSLASNGGRVQCMQVWP 215
PFNGLKS SAFPVTRKNNDITS+ASNGGRVQCMQVWP
Sbjct: 27 PFNGLKSVSAFPVTRKNNDITSVASNGGRVQCMQVWP 63
>gb|AAA33037.1| ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit
[Mesembryanthemum crystallinum]
Length = 183
Score = 78.2 bits (191), Expect = 1e-12
Identities = 35/37 (94%), Positives = 36/37 (97%)
Frame = +3
Query: 105 PFNGLKSTSAFPVTRKNNDITSLASNGGRVQCMQVWP 215
PFNGLKS SAFPVTRKNNDITS+ASNGGRVQCMQVWP
Sbjct: 27 PFNGLKSVSAFPVTRKNNDITSVASNGGRVQCMQVWP 63
>sp|Q08184.1|RBS4_MESCR RecName: Full=Ribulose bisphosphate carboxylase small chain 4,
chloroplastic; Short=RuBisCO small subunit 4; Flags:
Precursor gi|167274|gb|AAA33038.1| ribulose
1,5-bisphosphate carboxylase/oxygenase small subunit
[Mesembryanthemum crystallinum] gi|436488|gb|AAA03696.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Mesembryanthemum crystallinum]
Length = 183
Score = 77.8 bits (190), Expect = 1e-12
Identities = 35/37 (94%), Positives = 36/37 (97%)
Frame = +3
Query: 105 PFNGLKSTSAFPVTRKNNDITSLASNGGRVQCMQVWP 215
PFNGLKS SAFPVTRKNNDITS+ASNGGRVQCMQVWP
Sbjct: 27 PFNGLKSISAFPVTRKNNDITSVASNGGRVQCMQVWP 63
>sp|P24007.1|RBS_PYRPY RecName: Full=Ribulose bisphosphate carboxylase small chain,
chloroplastic; Short=RuBisCO small subunit; Flags:
Precursor gi|218021|dbj|BAA00450.1| RuBisCO small
subunit [Pyrus pyrifolia var. culta]
Length = 183
Score = 77.0 bits (188), Expect = 2e-12
Identities = 34/37 (91%), Positives = 37/37 (100%)
Frame = +3
Query: 105 PFNGLKSTSAFPVTRKNNDITSLASNGGRVQCMQVWP 215
PFNGLKS+SAFPVTRK+NDITS+ASNGGRVQCMQVWP
Sbjct: 29 PFNGLKSSSAFPVTRKSNDITSIASNGGRVQCMQVWP 65
>gb|ABK96567.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 181
Score = 75.9 bits (185), Expect = 5e-12
Identities = 36/38 (94%), Positives = 37/38 (97%), Gaps = 1/38 (2%)
Frame = +3
Query: 105 PFNGLKSTSAFPVTRK-NNDITSLASNGGRVQCMQVWP 215
PFNGLKSTSAFPVTRK NNDITS+ASNGGRVQCMQVWP
Sbjct: 26 PFNGLKSTSAFPVTRKANNDITSIASNGGRVQCMQVWP 63
>ref|XP_002329284.1| predicted protein [Populus trichocarpa]
gi|566171611|ref|XP_006383456.1| Ribulose bisphosphate
carboxylase small chain 1A family protein [Populus
trichocarpa] gi|118488169|gb|ABK95904.1| unknown
[Populus trichocarpa] gi|118488741|gb|ABK96181.1|
unknown [Populus trichocarpa]
gi|550339067|gb|ERP61253.1| Ribulose bisphosphate
carboxylase small chain 1A family protein [Populus
trichocarpa]
Length = 181
Score = 75.9 bits (185), Expect = 5e-12
Identities = 36/38 (94%), Positives = 37/38 (97%), Gaps = 1/38 (2%)
Frame = +3
Query: 105 PFNGLKSTSAFPVTRK-NNDITSLASNGGRVQCMQVWP 215
PFNGLKSTSAFPVTRK NNDITS+ASNGGRVQCMQVWP
Sbjct: 26 PFNGLKSTSAFPVTRKANNDITSIASNGGRVQCMQVWP 63
>gb|ABK96590.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 189
Score = 75.9 bits (185), Expect = 5e-12
Identities = 36/38 (94%), Positives = 37/38 (97%), Gaps = 1/38 (2%)
Frame = +3
Query: 105 PFNGLKSTSAFPVTRK-NNDITSLASNGGRVQCMQVWP 215
PFNGLKSTSAFPVTRK NNDITS+ASNGGRVQCMQVWP
Sbjct: 26 PFNGLKSTSAFPVTRKANNDITSIASNGGRVQCMQVWP 63
>ref|XP_004299075.1| PREDICTED: ribulose bisphosphate carboxylase small chain 1,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 180
Score = 75.1 bits (183), Expect = 9e-12
Identities = 34/37 (91%), Positives = 35/37 (94%)
Frame = +3
Query: 105 PFNGLKSTSAFPVTRKNNDITSLASNGGRVQCMQVWP 215
PFNGLKS SAFPVTRK NDIT+LASNGGRVQCMQVWP
Sbjct: 26 PFNGLKSASAFPVTRKANDITTLASNGGRVQCMQVWP 62
>gb|AAA33866.1| ribulose 1,5-bisphosphate carboxylase small subunit [Malus
domestica x Pyrus communis]
Length = 179
Score = 74.7 bits (182), Expect = 1e-11
Identities = 33/37 (89%), Positives = 36/37 (97%)
Frame = +3
Query: 105 PFNGLKSTSAFPVTRKNNDITSLASNGGRVQCMQVWP 215
PF GLKS+SAFPVTRK+NDITS+ASNGGRVQCMQVWP
Sbjct: 25 PFTGLKSSSAFPVTRKSNDITSIASNGGRVQCMQVWP 61
>gb|AAA33035.1| ribulose-1-5-bisphosphate carboxylase [Mesembryanthemum
crystallinum]
Length = 182
Score = 74.7 bits (182), Expect = 1e-11
Identities = 32/37 (86%), Positives = 36/37 (97%)
Frame = +3
Query: 105 PFNGLKSTSAFPVTRKNNDITSLASNGGRVQCMQVWP 215
PFNGLKS +AFPVT+KNNDITS+A+NGGRVQCMQVWP
Sbjct: 26 PFNGLKSVAAFPVTKKNNDITSVATNGGRVQCMQVWP 62
>sp|P16032.2|RBS1_MESCR RecName: Full=Ribulose bisphosphate carboxylase small chain 1,
chloroplastic; Short=RuBisCO small subunit 1; Flags:
Precursor gi|304442|gb|AAA03693.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Mesembryanthemum crystallinum]
gi|228311|prf||1802403A RuBisCO:SUBUNIT=small
Length = 182
Score = 74.7 bits (182), Expect = 1e-11
Identities = 32/37 (86%), Positives = 36/37 (97%)
Frame = +3
Query: 105 PFNGLKSTSAFPVTRKNNDITSLASNGGRVQCMQVWP 215
PFNGLKS +AFPVT+KNNDITS+A+NGGRVQCMQVWP
Sbjct: 26 PFNGLKSVAAFPVTKKNNDITSVATNGGRVQCMQVWP 62
>sp|Q9XGX4.1|RBS3_AMAHP RecName: Full=Ribulose bisphosphate carboxylase small chain 3,
chloroplastic; Short=RuBisCO small subunit 3; Flags:
Precursor gi|5002365|gb|AAD37440.1|AF150667_1 ribulose
1,5 bisphosphate carboxylase small subunit precursor
[Amaranthus hypochondriacus]
Length = 180
Score = 73.9 bits (180), Expect = 2e-11
Identities = 32/37 (86%), Positives = 36/37 (97%)
Frame = +3
Query: 105 PFNGLKSTSAFPVTRKNNDITSLASNGGRVQCMQVWP 215
PFNGLKS ++FPVTRK+NDITS+ASNGGRVQCMQVWP
Sbjct: 26 PFNGLKSIASFPVTRKSNDITSIASNGGRVQCMQVWP 62
>sp|Q9XGX5.1|RBS2_AMAHP RecName: Full=Ribulose bisphosphate carboxylase small chain 2,
chloroplastic; Short=RuBisCO small subunit 2; Flags:
Precursor gi|5002363|gb|AAD37439.1|AF150666_1 ribulose
1,5 bisphosphate carboxylase small subunit precursor
[Amaranthus hypochondriacus]
Length = 184
Score = 73.9 bits (180), Expect = 2e-11
Identities = 32/37 (86%), Positives = 36/37 (97%)
Frame = +3
Query: 105 PFNGLKSTSAFPVTRKNNDITSLASNGGRVQCMQVWP 215
PFNGLKS ++FPVTRK+NDITS+ASNGGRVQCMQVWP
Sbjct: 29 PFNGLKSIASFPVTRKSNDITSIASNGGRVQCMQVWP 65
>gb|AAA33036.1| ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit
[Mesembryanthemum crystallinum]
Length = 180
Score = 73.2 bits (178), Expect = 3e-11
Identities = 32/37 (86%), Positives = 35/37 (94%)
Frame = +3
Query: 105 PFNGLKSTSAFPVTRKNNDITSLASNGGRVQCMQVWP 215
PF GLKS SAFPVT+K+NDITS+ASNGGRVQCMQVWP
Sbjct: 24 PFTGLKSVSAFPVTKKSNDITSIASNGGRVQCMQVWP 60
>sp|Q04450.1|RBS2_MESCR RecName: Full=Ribulose bisphosphate carboxylase small chain 2,
chloroplastic; Short=RuBisCO small subunit 2; Flags:
Precursor gi|304444|gb|AAA03694.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Mesembryanthemum crystallinum]
Length = 180
Score = 73.2 bits (178), Expect = 3e-11
Identities = 32/37 (86%), Positives = 35/37 (94%)
Frame = +3
Query: 105 PFNGLKSTSAFPVTRKNNDITSLASNGGRVQCMQVWP 215
PF GLKS SAFPVT+K+NDITS+ASNGGRVQCMQVWP
Sbjct: 24 PFTGLKSVSAFPVTKKSNDITSIASNGGRVQCMQVWP 60
>dbj|BAI53118.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Eucalyptus globulus]
Length = 181
Score = 73.2 bits (178), Expect = 3e-11
Identities = 33/37 (89%), Positives = 34/37 (91%)
Frame = +3
Query: 105 PFNGLKSTSAFPVTRKNNDITSLASNGGRVQCMQVWP 215
PF GLKS SAFPVTRK+NDITSL SNGGRVQCMQVWP
Sbjct: 27 PFTGLKSASAFPVTRKSNDITSLPSNGGRVQCMQVWP 63
>sp|P31333.2|RBS_GOSHI RecName: Full=Ribulose bisphosphate carboxylase small chain,
chloroplastic; Short=RuBisCO small subunit; Flags:
Precursor gi|450505|emb|CAA38026.1| ribulose
bisphosphate carboxylase [Gossypium hirsutum]
gi|371942044|gb|AEX60834.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Gossypium hirsutum] gi|406366448|gb|AFS41721.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit (chloroplast) [Gossypium arboreum]
gi|406366458|gb|AFS41726.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Gossypium hirsutum] gi|406366488|gb|AFS41741.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit (chloroplast) [Gossypium tomentosum]
gi|406366504|gb|AFS41749.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Gossypium mustelinum] gi|406366516|gb|AFS41755.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit (chloroplast) [Gossypium darwinii]
Length = 182
Score = 72.4 bits (176), Expect = 6e-11
Identities = 35/38 (92%), Positives = 35/38 (92%), Gaps = 1/38 (2%)
Frame = +3
Query: 105 PFNGLKSTSAFPVTRK-NNDITSLASNGGRVQCMQVWP 215
PF GLKS SAFPVTRK NNDITSLASNGGRVQCMQVWP
Sbjct: 27 PFTGLKSASAFPVTRKANNDITSLASNGGRVQCMQVWP 64
>gb|AFS41772.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit,
partial (chloroplast) [Gossypioides kirkii]
gi|406366552|gb|AFS41773.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, partial
(chloroplast) [Gossypioides kirkii]
Length = 168
Score = 72.4 bits (176), Expect = 6e-11
Identities = 35/38 (92%), Positives = 35/38 (92%), Gaps = 1/38 (2%)
Frame = +3
Query: 105 PFNGLKSTSAFPVTRK-NNDITSLASNGGRVQCMQVWP 215
PF GLKS SAFPVTRK NNDITSLASNGGRVQCMQVWP
Sbjct: 19 PFTGLKSASAFPVTRKANNDITSLASNGGRVQCMQVWP 56
>gb|AFS41771.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit,
partial (chloroplast) [Gossypium gossypioides]
Length = 165
Score = 72.4 bits (176), Expect = 6e-11
Identities = 35/38 (92%), Positives = 35/38 (92%), Gaps = 1/38 (2%)
Frame = +3
Query: 105 PFNGLKSTSAFPVTRK-NNDITSLASNGGRVQCMQVWP 215
PF GLKS SAFPVTRK NNDITSLASNGGRVQCMQVWP
Sbjct: 16 PFTGLKSASAFPVTRKANNDITSLASNGGRVQCMQVWP 53
>gb|AFS41770.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit,
partial (chloroplast) [Gossypium gossypioides]
Length = 168
Score = 72.4 bits (176), Expect = 6e-11
Identities = 35/38 (92%), Positives = 35/38 (92%), Gaps = 1/38 (2%)
Frame = +3
Query: 105 PFNGLKSTSAFPVTRK-NNDITSLASNGGRVQCMQVWP 215
PF GLKS SAFPVTRK NNDITSLASNGGRVQCMQVWP
Sbjct: 19 PFTGLKSASAFPVTRKANNDITSLASNGGRVQCMQVWP 56