BLASTX nr result

ID: Achyranthes23_contig00029216 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00029216
         (508 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

prf||1613445A ribosomal protein CS-S5                                  59   5e-07
gb|AAA34039.1| ribosomal protein 30S subunit [Spinacia oleracea]       59   5e-07
sp|P19954.2|PRSP1_SPIOL RecName: Full=Ribosome-binding factor PS...    59   5e-07

>prf||1613445A ribosomal protein CS-S5
          Length = 321

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 36/77 (46%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
 Frame = -2

Query: 459 FTNCSSFGLNIVVKTV*F-HPKLNFVCMS*DSPVSPVKLIFQGRNLEVIDPMHIKVANFC 283
           FTN  S GLN+ VK+V     K N VCMS D P+S VKLI QGRNLEV D +   V +  
Sbjct: 39  FTNSCSLGLNVAVKSVQISRNKPNVVCMSWDGPLSSVKLILQGRNLEVSDNVRSHVED-- 96

Query: 282 RCCRMLANRLHIVTELE 232
           +  + +A   H+V E++
Sbjct: 97  KVGKSVAKHSHLVREVD 113


>gb|AAA34039.1| ribosomal protein 30S subunit [Spinacia oleracea]
          Length = 302

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 36/77 (46%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
 Frame = -2

Query: 459 FTNCSSFGLNIVVKTV*F-HPKLNFVCMS*DSPVSPVKLIFQGRNLEVIDPMHIKVANFC 283
           FTN  S GLN+ VK+V     K N VCMS D P+S VKLI QGRNLEV D +   V +  
Sbjct: 39  FTNSCSLGLNVAVKSVQISRNKPNVVCMSWDGPLSSVKLILQGRNLEVSDNVRSHVED-- 96

Query: 282 RCCRMLANRLHIVTELE 232
           +  + +A   H+V E++
Sbjct: 97  KVGKSVAKHSHLVREVD 113


>sp|P19954.2|PRSP1_SPIOL RecName: Full=Ribosome-binding factor PSRP1, chloroplastic;
           AltName: Full=30S ribosomal protein 1; AltName:
           Full=CS-S5; Short=CS5; AltName: Full=Plastid-specific
           30S ribosomal protein 1; Short=PSRP-1; AltName:
           Full=Ribosomal protein 1; AltName: Full=S22; Flags:
           Precursor gi|12316|emb|CAA41960.1| chloroplast ribosomal
           protein S22 [Spinacia oleracea] gi|18031|emb|CAA33403.1|
           spinach S22 r-protein [Spinacia oleracea]
          Length = 302

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 36/77 (46%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
 Frame = -2

Query: 459 FTNCSSFGLNIVVKTV*F-HPKLNFVCMS*DSPVSPVKLIFQGRNLEVIDPMHIKVANFC 283
           FTN  S GLN+ VK+V     K N VCMS D P+S VKLI QGRNLEV D +   V +  
Sbjct: 39  FTNSCSLGLNVAVKSVQISRNKPNVVCMSWDGPLSSVKLILQGRNLEVSDNVRSHVED-- 96

Query: 282 RCCRMLANRLHIVTELE 232
           +  + +A   H+V E++
Sbjct: 97  KVGKSVAKHSHLVREVD 113


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