BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00029070
         (689 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]     161   2e-55
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]     159   2e-55
gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subc...   154   8e-55
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]        156   1e-54
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   156   2e-54
emb|CAH66031.1| H0515C11.7 [Oryza sativa Indica Group]                155   5e-54
pir||S23312 retrovirus-related polyprotein KAS-1 - Arabidopsis t...   148   2e-53
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc...   155   3e-53
ref|NP_001174752.1| Os06g0316600 [Oryza sativa Japonica Group] g...   154   5e-53
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc...   153   9e-53
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]   152   9e-53
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]           154   2e-52
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group...   152   2e-52
gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group...   152   1e-51
gb|AAK70406.1|AF369930_1 pol polyprotein [Citrus x paradisi]          155   2e-51
emb|CAB75481.1| copia-like polyprotein [Arabidopsis thaliana]         140   5e-50
gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Ar...   142   1e-49
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...   199   7e-49
emb|CAN67902.1| hypothetical protein VITISV_037907 [Vitis vinifera]   142   2e-48
gb|AAD32759.1| putative retroelement pol polyprotein [Arabidopsi...   136   3e-47

>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score =  161 bits (408), Expect(2) = 2e-55
 Identities = 82/126 (65%), Positives = 102/126 (80%)
 Frame = -1

Query: 689  SSLMYAMVCTRLDLAQAVSVVSRFMVNSGKEHRRAVKLIFRYLRGTSDIGLIYGSDTQSL 510
            SSLMYAMVC+R DL+ A+SVVSR+M N GKEH +AV+ IFRYLRGTS   L +G  +  L
Sbjct: 1030 SSLMYAMVCSRPDLSHALSVVSRYMANPGKEHWKAVQWIFRYLRGTSSACLQFGRSSDGL 1089

Query: 509  VAGYCDSDYATDVDSRRSMTGYVFTLCGFAVSWKATLQSTITLSTTEAKHMVLTEATKEG 330
            V GY DSD+A D+D RRS+TGYVFT+ G AVSWKA+LQ+T+ LSTTEA++M ++EA KE 
Sbjct: 1090 V-GYVDSDFAGDLDRRRSLTGYVFTVGGCAVSWKASLQATVALSTTEAEYMAISEACKEV 1148

Query: 329  IWLKGL 312
            IWL+GL
Sbjct: 1149 IWLRGL 1154



 Score = 81.6 bits (200), Expect(2) = 2e-55
 Identities = 37/74 (50%), Positives = 53/74 (71%), Gaps = 3/74 (4%)
 Frame = -3

Query: 276  IYCDNLGAICIVKDQVHHDRTKHIDVRFLFMR---TGKRIKVKKIGTTENPADIFTKPVP 106
            I+CD+  AIC+ KDQ+ H+RTKHID+R+ F+R       +KV KI T +NP D+ TKPVP
Sbjct: 1167 IFCDSQSAICLTKDQMFHERTKHIDLRYHFIRGVIAEGDVKVCKISTHDNPVDMMTKPVP 1226

Query: 105  YSKFKLCMDLLNIS 64
             +KF+LC  L+ ++
Sbjct: 1227 ATKFELCSSLVGVT 1240


>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1211

 Score =  159 bits (402), Expect(2) = 2e-55
 Identities = 79/125 (63%), Positives = 99/125 (79%)
 Frame = -1

Query: 686  SLMYAMVCTRLDLAQAVSVVSRFMVNSGKEHRRAVKLIFRYLRGTSDIGLIYGSDTQSLV 507
            SLMYAMVC+RLDL+ A+SVVSR+M N GKEH + V+ IF+YLRGTS   L +G     LV
Sbjct: 1001 SLMYAMVCSRLDLSHALSVVSRYMANPGKEHWKVVQWIFKYLRGTSSACLQFGRSRDGLV 1060

Query: 506  AGYCDSDYATDVDSRRSMTGYVFTLCGFAVSWKATLQSTITLSTTEAKHMVLTEATKEGI 327
             GY DSD+A D+D RRS+TGYVFT+ G AVSWKA+LQ+T+ LSTTE ++M ++EA KE I
Sbjct: 1061 -GYVDSDFAGDLDRRRSLTGYVFTIGGCAVSWKASLQATVALSTTEVEYMAISEACKEAI 1119

Query: 326  WLKGL 312
            WL+GL
Sbjct: 1120 WLRGL 1124



 Score = 83.6 bits (205), Expect(2) = 2e-55
 Identities = 39/74 (52%), Positives = 53/74 (71%), Gaps = 3/74 (4%)
 Frame = -3

Query: 276  IYCDNLGAICIVKDQVHHDRTKHIDVRFLFMR---TGKRIKVKKIGTTENPADIFTKPVP 106
            I+CD+  AIC  KDQ+ H+RTKHIDVR+ F+R       +KV KI T +NPAD+ TKPVP
Sbjct: 1137 IFCDSQSAICFTKDQMFHERTKHIDVRYHFIRGVIAEGDVKVCKISTHDNPADMMTKPVP 1196

Query: 105  YSKFKLCMDLLNIS 64
             +KF+LC  L+ ++
Sbjct: 1197 TTKFELCSSLVGVT 1210


>gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1138

 Score =  154 bits (390), Expect(2) = 8e-55
 Identities = 79/125 (63%), Positives = 97/125 (77%)
 Frame = -1

Query: 686  SLMYAMVCTRLDLAQAVSVVSRFMVNSGKEHRRAVKLIFRYLRGTSDIGLIYGSDTQSLV 507
            SLMYAMVC+R DL+ A+SVVSR+M N GKEH +AV+ IFRYL GTS   L +G     LV
Sbjct: 928  SLMYAMVCSRPDLSHALSVVSRYMANPGKEHWKAVQWIFRYLCGTSSACLQFGRSRDGLV 987

Query: 506  AGYCDSDYATDVDSRRSMTGYVFTLCGFAVSWKATLQSTITLSTTEAKHMVLTEATKEGI 327
             GY DSD+A D+D RRS+ GYVFT+ G AVSWKA LQ+T+ LSTTEA++M ++EA KE I
Sbjct: 988  -GYVDSDFAGDLDRRRSLAGYVFTIGGCAVSWKANLQATVALSTTEAEYMAISEACKETI 1046

Query: 326  WLKGL 312
            WL+GL
Sbjct: 1047 WLRGL 1051



 Score = 86.3 bits (212), Expect(2) = 8e-55
 Identities = 40/74 (54%), Positives = 55/74 (74%), Gaps = 3/74 (4%)
 Frame = -3

Query: 276  IYCDNLGAICIVKDQVHHDRTKHIDVRFLFMR---TGKRIKVKKIGTTENPADIFTKPVP 106
            I+CD+  AIC+ KDQ+ H+RTKHIDVR+ F+R   T   +KV KI T +NPAD+ TKPVP
Sbjct: 1064 IFCDSQSAICLTKDQMFHERTKHIDVRYHFIRSVITEGDVKVCKISTHDNPADMMTKPVP 1123

Query: 105  YSKFKLCMDLLNIS 64
             +KF+LC  L+ ++
Sbjct: 1124 ATKFELCSSLVGVT 1137


>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
          Length = 1181

 Score =  156 bits (394), Expect(2) = 1e-54
 Identities = 78/125 (62%), Positives = 98/125 (78%)
 Frame = -1

Query: 686  SLMYAMVCTRLDLAQAVSVVSRFMVNSGKEHRRAVKLIFRYLRGTSDIGLIYGSDTQSLV 507
            SLMYAM+C+R DL+ A+SVVSR+M N GKEH + V+ IFRYL GTS   L +G     LV
Sbjct: 971  SLMYAMICSRPDLSHALSVVSRYMANPGKEHWKDVQWIFRYLHGTSSACLQFGRSRDGLV 1030

Query: 506  AGYCDSDYATDVDSRRSMTGYVFTLCGFAVSWKATLQSTITLSTTEAKHMVLTEATKEGI 327
             GY DSD+A D+D RRS+TGYVFT+ G AVSWKA+LQ+T+ LSTTEA++M ++EA KE I
Sbjct: 1031 -GYVDSDFAGDLDRRRSLTGYVFTIGGCAVSWKASLQATVALSTTEAEYMAISEACKEAI 1089

Query: 326  WLKGL 312
            WL+GL
Sbjct: 1090 WLRGL 1094



 Score = 84.3 bits (207), Expect(2) = 1e-54
 Identities = 39/74 (52%), Positives = 54/74 (72%), Gaps = 3/74 (4%)
 Frame = -3

Query: 276  IYCDNLGAICIVKDQVHHDRTKHIDVRFLFMR---TGKRIKVKKIGTTENPADIFTKPVP 106
            I+CD+  AIC+ KDQ+ H+RTKHIDVR+ F+R       +KV KI T +NPAD+ TKPVP
Sbjct: 1107 IFCDSQSAICLTKDQMFHERTKHIDVRYHFIRGVIAEGDVKVCKISTHDNPADMMTKPVP 1166

Query: 105  YSKFKLCMDLLNIS 64
             +KF+LC  L+ ++
Sbjct: 1167 ATKFELCSSLVGVT 1180


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77548751|gb|ABA91548.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 2340

 Score =  156 bits (394), Expect(2) = 2e-54
 Identities = 79/125 (63%), Positives = 98/125 (78%)
 Frame = -1

Query: 686  SLMYAMVCTRLDLAQAVSVVSRFMVNSGKEHRRAVKLIFRYLRGTSDIGLIYGSDTQSLV 507
            SLMYAMVC+R DL+ A+SVVSR+M N GKEH +AV+ IFRYLRGTS   L +G     LV
Sbjct: 1329 SLMYAMVCSRPDLSHALSVVSRYMANPGKEHWKAVQWIFRYLRGTSSACLQFGRSRDGLV 1388

Query: 506  AGYCDSDYATDVDSRRSMTGYVFTLCGFAVSWKATLQSTITLSTTEAKHMVLTEATKEGI 327
             GY DSD+A D+D  RS+ GYVFT+ G AVSWKA+LQ+T+ LSTTEA++M ++EA KE I
Sbjct: 1389 -GYVDSDFAGDLDRGRSLAGYVFTIGGCAVSWKASLQATVALSTTEAEYMAISEACKEAI 1447

Query: 326  WLKGL 312
            WL+GL
Sbjct: 1448 WLRGL 1452



 Score = 83.6 bits (205), Expect(2) = 2e-54
 Identities = 39/75 (52%), Positives = 54/75 (72%), Gaps = 3/75 (4%)
 Frame = -3

Query: 276  IYCDNLGAICIVKDQVHHDRTKHIDVRFLFMR---TGKRIKVKKIGTTENPADIFTKPVP 106
            I+CD+  AIC+ KDQ+ H+RTKHIDVR+ F+R       +K+ KI   +NPAD+ TKPVP
Sbjct: 1465 IFCDSQSAICLTKDQMFHERTKHIDVRYHFIRGLIAEGDVKICKISIHDNPADMMTKPVP 1524

Query: 105  YSKFKLCMDLLNISD 61
             +KF+LC  L+ +SD
Sbjct: 1525 ATKFELCSSLVILSD 1539


>emb|CAH66031.1| H0515C11.7 [Oryza sativa Indica Group]
          Length = 293

 Score =  155 bits (391), Expect(2) = 5e-54
 Identities = 77/125 (61%), Positives = 96/125 (76%)
 Frame = -1

Query: 686 SLMYAMVCTRLDLAQAVSVVSRFMVNSGKEHRRAVKLIFRYLRGTSDIGLIYGSDTQSLV 507
           SLMYAMVC+R DL+ A+S+VSR+M N GKEH +A+  IFRYLRGT+D  L +G   + LV
Sbjct: 83  SLMYAMVCSRPDLSHAMSLVSRYMTNPGKEHWKAIHWIFRYLRGTTDACLKFGRTDKGLV 142

Query: 506 AGYCDSDYATDVDSRRSMTGYVFTLCGFAVSWKATLQSTITLSTTEAKHMVLTEATKEGI 327
            GY DSD+A D+D RRS+TGYVFT+   AVSWKATLQ  +  STTEA++M + EA KE +
Sbjct: 143 -GYVDSDFAADLDKRRSLTGYVFTIGSCAVSWKATLQPIVAQSTTEAEYMAIAEACKESV 201

Query: 326 WLKGL 312
           WLKGL
Sbjct: 202 WLKGL 206



 Score = 83.2 bits (204), Expect(2) = 5e-54
 Identities = 39/88 (44%), Positives = 59/88 (67%), Gaps = 3/88 (3%)
 Frame = -3

Query: 321 KGTSRDLRLQEDRTTIYCDNLGAICIVKDQVHHDRTKHIDVRFLFMR---TGKRIKVKKI 151
           KG   +L   +    ++CD+  AIC+ KDQ+ H+RTKHID+++ ++R      ++KV KI
Sbjct: 204 KGLFAELCGVDSCINLFCDSQSAICLTKDQMFHERTKHIDIKYHYVRDVVAQGKLKVCKI 263

Query: 150 GTTENPADIFTKPVPYSKFKLCMDLLNI 67
            T +NPAD+ TKPVP +KF+LC  L+ I
Sbjct: 264 STHDNPADMMTKPVPVAKFELCSSLVGI 291


>pir||S23312 retrovirus-related polyprotein KAS-1 - Arabidopsis thaliana
           retrotransposon Ta1 (fragment) gi|16356|emb|CAA37917.1|
           reverse transcriptase [Arabidopsis thaliana]
          Length = 587

 Score =  148 bits (373), Expect(2) = 2e-53
 Identities = 71/126 (56%), Positives = 91/126 (72%)
 Frame = -1

Query: 686 SLMYAMVCTRLDLAQAVSVVSRFMVNSGKEHRRAVKLIFRYLRGTSDIGLIYGSDTQSLV 507
           S+MYAM+ TR DLA  + +VSR+M   G  H  AVK I RY+RG+ D+ L++  + +  V
Sbjct: 374 SIMYAMIGTRPDLAYDICLVSRYMARPGSIHWEAVKWILRYMRGSQDLNLVFTKEKEFRV 433

Query: 506 AGYCDSDYATDVDSRRSMTGYVFTLCGFAVSWKATLQSTITLSTTEAKHMVLTEATKEGI 327
            GYCDSDYA D+D RRS++GYVFT+ G  VSWKA LQS   LSTTEA+ M LTEA KE +
Sbjct: 434 TGYCDSDYAADLDRRRSVSGYVFTVGGNTVSWKANLQSVTALSTTEAEFMALTEAAKEAL 493

Query: 326 WLKGLV 309
           W+KGL+
Sbjct: 494 WIKGLM 499



 Score = 87.8 bits (216), Expect(2) = 2e-53
 Identities = 40/88 (45%), Positives = 60/88 (68%), Gaps = 3/88 (3%)
 Frame = -3

Query: 321 KGTSRDLRLQEDRTTIYCDNLGAICIVKDQVHHDRTKHIDVRFLFMR---TGKRIKVKKI 151
           KG  +DL L++D+ T++CD+  AIC+ K+  HH+RTKHIDVR+ F+R       + V KI
Sbjct: 496 KGLMKDLGLEQDKVTLWCDSQSAICLSKNSTHHERTKHIDVRYNFIRDVVEAGDVDVLKI 555

Query: 150 GTTENPADIFTKPVPYSKFKLCMDLLNI 67
            T+ NPAD  TK +P +KF+  ++LL +
Sbjct: 556 HTSRNPADALTKSIPVNKFQSALELLKL 583


>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1333

 Score =  155 bits (391), Expect(2) = 3e-53
 Identities = 80/125 (64%), Positives = 98/125 (78%)
 Frame = -1

Query: 686  SLMYAMVCTRLDLAQAVSVVSRFMVNSGKEHRRAVKLIFRYLRGTSDIGLIYGSDTQSLV 507
            SLMYAMVC+R DL+ A+S+VSR+M N GKEH RAV+ IFRYLRGT+   L +G   + L+
Sbjct: 1123 SLMYAMVCSRPDLSYAMSLVSRYMSNPGKEHWRAVQWIFRYLRGTTYSCLKFGRTDKGLI 1182

Query: 506  AGYCDSDYATDVDSRRSMTGYVFTLCGFAVSWKATLQSTITLSTTEAKHMVLTEATKEGI 327
             GY DSDYA D+D RRS+TGYVFT+   AVSW+ATLQS + LSTTEA++M + EA KE I
Sbjct: 1183 -GYVDSDYAADLDRRRSLTGYVFTIGSCAVSWRATLQSVVALSTTEAEYMAICEACKELI 1241

Query: 326  WLKGL 312
            WLKGL
Sbjct: 1242 WLKGL 1246



 Score = 80.5 bits (197), Expect(2) = 3e-53
 Identities = 38/88 (43%), Positives = 59/88 (67%), Gaps = 3/88 (3%)
 Frame = -3

Query: 321  KGTSRDLRLQEDRTTIYCDNLGAICIVKDQVHHDRTKHIDVRFLFMR---TGKRIKVKKI 151
            KG   +L   E   +++CD+  AI + KDQ+ H+RTKHID+++ F+R      ++KV KI
Sbjct: 1244 KGLYAELSGVESCISLHCDSQSAIYLTKDQMFHERTKHIDIKYHFVRDVIEEGKLKVCKI 1303

Query: 150  GTTENPADIFTKPVPYSKFKLCMDLLNI 67
             T +NPAD+ TKP+P +KF+LC  L+ +
Sbjct: 1304 STHDNPADMMTKPIPVAKFELCSSLVGL 1331


>ref|NP_001174752.1| Os06g0316600 [Oryza sativa Japonica Group]
           gi|255676990|dbj|BAH93480.1| Os06g0316600 [Oryza sativa
           Japonica Group]
          Length = 759

 Score =  154 bits (390), Expect(2) = 5e-53
 Identities = 77/124 (62%), Positives = 96/124 (77%)
 Frame = -1

Query: 683 LMYAMVCTRLDLAQAVSVVSRFMVNSGKEHRRAVKLIFRYLRGTSDIGLIYGSDTQSLVA 504
           LMYAMVC+R DL+ A+S+VSR+M N GKEH +AV+ IFRYLRGT+D  L +G   + LV 
Sbjct: 550 LMYAMVCSRPDLSHAMSLVSRYMANPGKEHWKAVQWIFRYLRGTADACLKFGRTDKGLV- 608

Query: 503 GYCDSDYATDVDSRRSMTGYVFTLCGFAVSWKATLQSTITLSTTEAKHMVLTEATKEGIW 324
           GY DSD+A D+D RRS+TGYVFT+   AVSWKATLQ  +  STTEA++M + EA KE +W
Sbjct: 609 GYVDSDFAADLDKRRSLTGYVFTIGSCAVSWKATLQPIVAQSTTEAEYMAIAEACKESVW 668

Query: 323 LKGL 312
           LKGL
Sbjct: 669 LKGL 672



 Score = 80.1 bits (196), Expect(2) = 5e-53
 Identities = 35/73 (47%), Positives = 54/73 (73%), Gaps = 3/73 (4%)
 Frame = -3

Query: 276 IYCDNLGAICIVKDQVHHDRTKHIDVRFLFMR---TGKRIKVKKIGTTENPADIFTKPVP 106
           ++CD+  AIC+ KDQ+ H+RTK+ID+++ ++R      ++KV KI T +NPAD+ TKPVP
Sbjct: 685 LFCDSQSAICLTKDQMFHERTKYIDIKYHYVRDVVAQGKLKVCKISTHDNPADMMTKPVP 744

Query: 105 YSKFKLCMDLLNI 67
            +KF+LC  L+ I
Sbjct: 745 VAKFELCSSLVGI 757


>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1333

 Score =  153 bits (387), Expect(2) = 9e-53
 Identities = 79/125 (63%), Positives = 97/125 (77%)
 Frame = -1

Query: 686  SLMYAMVCTRLDLAQAVSVVSRFMVNSGKEHRRAVKLIFRYLRGTSDIGLIYGSDTQSLV 507
            SLMYAMVC+R DL+ A+S+VSR+M N GKEH R V+ IFRYLRGT+   L +G   + L+
Sbjct: 1123 SLMYAMVCSRPDLSYAMSLVSRYMSNPGKEHWRVVQWIFRYLRGTTYSCLKFGRTDKGLI 1182

Query: 506  AGYCDSDYATDVDSRRSMTGYVFTLCGFAVSWKATLQSTITLSTTEAKHMVLTEATKEGI 327
             GY DSDYA D+D RRS+TGYVFT+   AVSW+ATLQS + LSTTEA++M + EA KE I
Sbjct: 1183 -GYVDSDYAADLDRRRSLTGYVFTIGSCAVSWRATLQSVVALSTTEAEYMAICEACKELI 1241

Query: 326  WLKGL 312
            WLKGL
Sbjct: 1242 WLKGL 1246



 Score = 80.5 bits (197), Expect(2) = 9e-53
 Identities = 38/88 (43%), Positives = 59/88 (67%), Gaps = 3/88 (3%)
 Frame = -3

Query: 321  KGTSRDLRLQEDRTTIYCDNLGAICIVKDQVHHDRTKHIDVRFLFMR---TGKRIKVKKI 151
            KG   +L   E   +++CD+  AI + KDQ+ H+RTKHID+++ F+R      ++KV KI
Sbjct: 1244 KGLYAELSGVESCISLHCDSQSAIYLTKDQMFHERTKHIDIKYHFVRDVIEEGKLKVCKI 1303

Query: 150  GTTENPADIFTKPVPYSKFKLCMDLLNI 67
             T +NPAD+ TKP+P +KF+LC  L+ +
Sbjct: 1304 STHDNPADMMTKPIPVAKFELCSSLVGL 1331


>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
          Length = 1208

 Score =  152 bits (383), Expect(2) = 9e-53
 Identities = 73/127 (57%), Positives = 99/127 (77%), Gaps = 2/127 (1%)
 Frame = -1

Query: 686  SLMYAMVCTRLDLAQAVSVVSRFMVNSGKEHRRAVKLIFRYLRGTSDIGLIYGSDTQ--S 513
            S+MY MVC+R DLA AVS++SR+M   GK H +AVK +F+YL GT  +GL+YG ++Q  +
Sbjct: 994  SVMYTMVCSRPDLAYAVSMISRYMSCPGKPHWQAVKWLFQYLAGTRSLGLVYGGNSQLET 1053

Query: 512  LVAGYCDSDYATDVDSRRSMTGYVFTLCGFAVSWKATLQSTITLSTTEAKHMVLTEATKE 333
             + G+ D+DYA ++D+R+S+TGYVFT  G AVSWKA LQS + LSTTEA++M +TEA KE
Sbjct: 1054 QLQGFVDADYAGNIDTRKSLTGYVFTXFGGAVSWKANLQSVVALSTTEAEYMAMTEAVKE 1113

Query: 332  GIWLKGL 312
             IWLKG+
Sbjct: 1114 AIWLKGI 1120



 Score = 82.0 bits (201), Expect(2) = 9e-53
 Identities = 38/91 (41%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
 Frame = -3

Query: 321  KGTSRDLRLQEDRTTIYCDNLGAICIVKDQVHHDRTKHIDVRFLFMR---TGKRIKVKKI 151
            KG + +L +   +  +YCDN  AI + K+Q  H+R+KHIDVR  F+R       I V K+
Sbjct: 1118 KGITEELAMYRGKVVVYCDNQSAIHLAKNQSFHERSKHIDVRLHFVRDIIAAGEIGVGKV 1177

Query: 150  GTTENPADIFTKPVPYSKFKLCMDLLNISDC 58
             T +NP+D+ TK +  +KFK C++L+N+ DC
Sbjct: 1178 HTKDNPSDMLTKSLNVTKFKHCLNLINMGDC 1208


>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
          Length = 1335

 Score =  154 bits (388), Expect(2) = 2e-52
 Identities = 79/125 (63%), Positives = 98/125 (78%)
 Frame = -1

Query: 686  SLMYAMVCTRLDLAQAVSVVSRFMVNSGKEHRRAVKLIFRYLRGTSDIGLIYGSDTQSLV 507
            SLMYAMVC+R DL+ A+S+VSR+M N GKEH RA++ IFRYLRGT+   L +G   + L+
Sbjct: 1125 SLMYAMVCSRPDLSYAMSLVSRYMSNPGKEHWRALQWIFRYLRGTTYSCLKFGRTDKGLI 1184

Query: 506  AGYCDSDYATDVDSRRSMTGYVFTLCGFAVSWKATLQSTITLSTTEAKHMVLTEATKEGI 327
             GY DSDYA D+D RRS+TGYVFT+   AVSW+ATLQS + LSTTEA++M + EA KE I
Sbjct: 1185 -GYVDSDYAADLDRRRSLTGYVFTIGSCAVSWRATLQSVVALSTTEAEYMAICEACKELI 1243

Query: 326  WLKGL 312
            WLKGL
Sbjct: 1244 WLKGL 1248



 Score = 79.3 bits (194), Expect(2) = 2e-52
 Identities = 38/88 (43%), Positives = 59/88 (67%), Gaps = 3/88 (3%)
 Frame = -3

Query: 321  KGTSRDLRLQEDRTTIYCDNLGAICIVKDQVHHDRTKHIDVRFLFMR---TGKRIKVKKI 151
            KG   +L   E   +++CD+  AI + KDQ+ H+RTKHID+++ F+R      ++KV KI
Sbjct: 1246 KGLYAELSGVESCISLHCDSQSAIYLTKDQMFHERTKHIDIKYHFVRDVIEEGKLKVCKI 1305

Query: 150  GTTENPADIFTKPVPYSKFKLCMDLLNI 67
             T +NPAD+ TKP+P +KF+LC  L+ +
Sbjct: 1306 CTHDNPADMMTKPIPVAKFELCSSLVGL 1333


>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|53370655|gb|AAU89150.1| integrase core domain
            containing protein [Oryza sativa Japonica Group]
            gi|108710286|gb|ABF98081.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1322

 Score =  152 bits (385), Expect(2) = 2e-52
 Identities = 77/125 (61%), Positives = 96/125 (76%)
 Frame = -1

Query: 686  SLMYAMVCTRLDLAQAVSVVSRFMVNSGKEHRRAVKLIFRYLRGTSDIGLIYGSDTQSLV 507
            SLMYAMVC+  DL+ A+S+VSR+M N GKEH +AV+ IFRYLRGT+D  L +G   + LV
Sbjct: 1112 SLMYAMVCSWPDLSHAMSLVSRYMANPGKEHWKAVQWIFRYLRGTADACLKFGRIDKGLV 1171

Query: 506  AGYCDSDYATDVDSRRSMTGYVFTLCGFAVSWKATLQSTITLSTTEAKHMVLTEATKEGI 327
             GY DSD+A D+D RRS+TGYVFT+   AVSWKATLQ  +  STTEA++M + EA KE +
Sbjct: 1172 -GYVDSDFAADLDKRRSLTGYVFTIGSCAVSWKATLQPVVAQSTTEAEYMAIAEACKESV 1230

Query: 326  WLKGL 312
            WLKGL
Sbjct: 1231 WLKGL 1235



 Score = 80.5 bits (197), Expect(2) = 2e-52
 Identities = 37/88 (42%), Positives = 58/88 (65%), Gaps = 3/88 (3%)
 Frame = -3

Query: 321  KGTSRDLRLQEDRTTIYCDNLGAICIVKDQVHHDRTKHIDVRFLFMR---TGKRIKVKKI 151
            KG   +L   +    ++CD+  AIC+ KDQ+ H+RTKHID+++ ++R      ++KV KI
Sbjct: 1233 KGLFAELCGVDSCINLFCDSQSAICLTKDQMFHERTKHIDIKYHYVRDIVAQGKLKVCKI 1292

Query: 150  GTTENPADIFTKPVPYSKFKLCMDLLNI 67
               +NPAD+ TKP+P +KF+LC  L+ I
Sbjct: 1293 SIHDNPADMMTKPIPVAKFELCSSLVGI 1320


>gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|48475101|gb|AAT44170.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1175

 Score =  152 bits (385), Expect(2) = 1e-51
 Identities = 74/125 (59%), Positives = 97/125 (77%)
 Frame = -1

Query: 686  SLMYAMVCTRLDLAQAVSVVSRFMVNSGKEHRRAVKLIFRYLRGTSDIGLIYGSDTQSLV 507
            SLMYAMVC+RLDL+ A+S+VSR+M N GKEH +A++ IFRYLR T++  L +G   + L+
Sbjct: 965  SLMYAMVCSRLDLSHAMSLVSRYMANPGKEHWKAIQWIFRYLRDTANACLKFGRTNKGLI 1024

Query: 506  AGYCDSDYATDVDSRRSMTGYVFTLCGFAVSWKATLQSTITLSTTEAKHMVLTEATKEGI 327
             GY DSD+A D+D RRS+TGYVFT+   AVSWKATL+  +  STTEA++M + EA KE +
Sbjct: 1025 -GYVDSDFAADLDKRRSLTGYVFTIGSCAVSWKATLRHVVAQSTTEAEYMAIAEACKESV 1083

Query: 326  WLKGL 312
            WLKGL
Sbjct: 1084 WLKGL 1088



 Score = 77.4 bits (189), Expect(2) = 1e-51
 Identities = 34/73 (46%), Positives = 52/73 (71%), Gaps = 3/73 (4%)
 Frame = -3

Query: 276  IYCDNLGAICIVKDQVHHDRTKHIDVRFLFMR---TGKRIKVKKIGTTENPADIFTKPVP 106
            ++CD+  AIC+ KDQ+ H+RTKHID+++ ++R      ++KV KI T +NP D+ TK VP
Sbjct: 1101 LFCDSQSAICLTKDQMFHERTKHIDIKYHYVRDVVAQGKLKVCKISTHDNPVDMMTKHVP 1160

Query: 105  YSKFKLCMDLLNI 67
             +KF+LC  L+ I
Sbjct: 1161 VAKFELCSSLVGI 1173


>gb|AAK70406.1|AF369930_1 pol polyprotein [Citrus x paradisi]
          Length = 297

 Score =  155 bits (393), Expect(2) = 2e-51
 Identities = 77/127 (60%), Positives = 97/127 (76%)
 Frame = -1

Query: 686 SLMYAMVCTRLDLAQAVSVVSRFMVNSGKEHRRAVKLIFRYLRGTSDIGLIYGSDTQSLV 507
           SL+YAMVCTR D++QAVS+VSR+M N GK    AVK I RYL GT D+GL++  +     
Sbjct: 84  SLIYAMVCTRPDISQAVSMVSRYMHNPGKSQWLAVKWILRYLYGTVDVGLLFKKNCGQQC 143

Query: 506 AGYCDSDYATDVDSRRSMTGYVFTLCGFAVSWKATLQSTITLSTTEAKHMVLTEATKEGI 327
            GYCDSD+A D+D +RS +GYVFTL G +VSW++ LQSTI LSTTEA+++  TEA KE I
Sbjct: 144 VGYCDSDFAGDLDKQRSTSGYVFTLGGGSVSWRSILQSTIALSTTEAEYIAATEAVKEAI 203

Query: 326 WLKGLVG 306
           WLKGL+G
Sbjct: 204 WLKGLLG 210



 Score = 73.9 bits (180), Expect(2) = 2e-51
 Identities = 36/88 (40%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
 Frame = -3

Query: 321 KGTSRDLRLQEDRTTIYCDNLGAICIVKDQVHHDRTKHIDVRFLFMR---TGKRIKVKKI 151
           KG   DL + ++   ++CDN  AI + K+Q +H RTKHIDV++ ++R    G  + +KKI
Sbjct: 206 KGLLGDLGVIQENIAVFCDNQSAIFLAKNQTYHARTKHIDVKYHYVREIIEGGDVLLKKI 265

Query: 150 GTTENPADIFTKPVPYSKFKLCMDLLNI 67
            T +NP+D+ TK V   KF+ C+ L+ I
Sbjct: 266 DTKDNPSDMLTKVVSEVKFQHCLKLIQI 293


>emb|CAB75481.1| copia-like polyprotein [Arabidopsis thaliana]
          Length = 1363

 Score =  140 bits (352), Expect(2) = 5e-50
 Identities = 69/126 (54%), Positives = 87/126 (69%)
 Frame = -1

Query: 686  SLMYAMVCTRLDLAQAVSVVSRFMVNSGKEHRRAVKLIFRYLRGTSDIGLIYGSDTQSLV 507
            S+MYAM+ TR DLA  V VVSRFM    KEH   VK + RY++GT D  L Y  ++   +
Sbjct: 1151 SIMYAMIGTRPDLAYPVGVVSRFMSQPAKEHWLGVKWVLRYIKGTVDTRLCYKRNSDFSI 1210

Query: 506  AGYCDSDYATDVDSRRSMTGYVFTLCGFAVSWKATLQSTITLSTTEAKHMVLTEATKEGI 327
             GYCD+DYA D+D RRS+TG VFTL G  +SWK+ LQ  +  S+TE ++M LTEA KE I
Sbjct: 1211 CGYCDADYAADLDKRRSITGLVFTLGGNTISWKSGLQRVVAQSSTECEYMSLTEAVKEAI 1270

Query: 326  WLKGLV 309
            WLKGL+
Sbjct: 1271 WLKGLL 1276



 Score = 84.7 bits (208), Expect(2) = 5e-50
 Identities = 39/88 (44%), Positives = 58/88 (65%), Gaps = 3/88 (3%)
 Frame = -3

Query: 321  KGTSRDLRLQEDRTTIYCDNLGAICIVKDQVHHDRTKHIDVRFLFMR---TGKRIKVKKI 151
            KG  +D   ++    I+CD+  AI + K+ VHH+RTKHIDV+F F+R      +++V KI
Sbjct: 1273 KGLLKDFGYEQKNVEIFCDSQSAIALSKNNVHHERTKHIDVKFHFIREIIADGKVEVSKI 1332

Query: 150  GTTENPADIFTKPVPYSKFKLCMDLLNI 67
             T +NPADIFTK +P +KF+  +D L +
Sbjct: 1333 STEKNPADIFTKVLPVNKFQTALDFLRV 1360


>gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Arabidopsis thaliana]
          Length = 1356

 Score =  142 bits (358), Expect(2) = 1e-49
 Identities = 65/126 (51%), Positives = 91/126 (72%)
 Frame = -1

Query: 686  SLMYAMVCTRLDLAQAVSVVSRFMVNSGKEHRRAVKLIFRYLRGTSDIGLIYGSDTQSLV 507
            S+MYAM+ TR DLA A+ ++SR+M   G  H  AVK + RYL+G  D+ L++  +    V
Sbjct: 1143 SIMYAMLGTRPDLAYAICLISRYMSKPGSMHWEAVKWVMRYLKGAQDLNLVFTKEKDFTV 1202

Query: 506  AGYCDSDYATDVDSRRSMTGYVFTLCGFAVSWKATLQSTITLSTTEAKHMVLTEATKEGI 327
             GYCDS+YA D+D RRS++GYVFT+ G  VSWKA+LQ  + +STTEA+++ L EA KE +
Sbjct: 1203 TGYCDSNYAADLDRRRSISGYVFTIGGNTVSWKASLQPVVAMSTTEAEYIALAEAAKEAM 1262

Query: 326  WLKGLV 309
            W+KGL+
Sbjct: 1263 WIKGLL 1268



 Score = 81.3 bits (199), Expect(2) = 1e-49
 Identities = 38/88 (43%), Positives = 58/88 (65%), Gaps = 3/88 (3%)
 Frame = -3

Query: 321  KGTSRDLRLQEDRTTIYCDNLGAICIVKDQVHHDRTKHIDVRFLFMR---TGKRIKVKKI 151
            KG  +D+ +Q+D+  I+CD+  AIC+ K+ V+H+RTKHIDVRF ++R       + V KI
Sbjct: 1265 KGLLQDMGMQQDKVKIWCDSQSAICLSKNSVYHERTKHIDVRFNYIRDVVESGDVDVLKI 1324

Query: 150  GTTENPADIFTKPVPYSKFKLCMDLLNI 67
             T+ NP D  TK +P +KFK  + +L +
Sbjct: 1325 HTSRNPVDALTKCIPVNKFKSALGVLKL 1352


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
            copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  199 bits (506), Expect = 7e-49
 Identities = 101/126 (80%), Positives = 108/126 (85%)
 Frame = -1

Query: 686  SLMYAMVCTRLDLAQAVSVVSRFMVNSGKEHRRAVKLIFRYLRGTSDIGLIYGSDTQSLV 507
            SLMYAMVCTR DLA AVSVVSRFM   G+EH +AVK IFRYLRGTSD+GLIYG DTQ LV
Sbjct: 1098 SLMYAMVCTRPDLAHAVSVVSRFMGQPGREHWQAVKRIFRYLRGTSDVGLIYGGDTQCLV 1157

Query: 506  AGYCDSDYATDVDSRRSMTGYVFTLCGFAVSWKATLQSTITLSTTEAKHMVLTEATKEGI 327
             GY DSDYA DVD+RRSMTGYVFTL G  VSWKATLQ T+TLSTTEA++M LTEA KEGI
Sbjct: 1158 TGYSDSDYAGDVDTRRSMTGYVFTLGGSVVSWKATLQPTVTLSTTEAEYMALTEAAKEGI 1217

Query: 326  WLKGLV 309
            WLKGLV
Sbjct: 1218 WLKGLV 1223



 Score =  135 bits (339), Expect = 2e-29
 Identities = 61/94 (64%), Positives = 74/94 (78%)
 Frame = -3

Query: 339  KRGNLAKGTSRDLRLQEDRTTIYCDNLGAICIVKDQVHHDRTKHIDVRFLFMRTGKRIKV 160
            K G   KG   DL L  D+ T+YCD+L AIC+ KDQVHH+RTKHIDVR+ F+R+ KRIKV
Sbjct: 1214 KEGIWLKGLVSDLGLHHDQATVYCDSLSAICLAKDQVHHERTKHIDVRYHFLRSEKRIKV 1273

Query: 159  KKIGTTENPADIFTKPVPYSKFKLCMDLLNISDC 58
            KK+GT +NPAD+FTKPVP SKF+ C+DLLNI  C
Sbjct: 1274 KKVGTADNPADMFTKPVPQSKFQHCLDLLNIRSC 1307


>emb|CAN67902.1| hypothetical protein VITISV_037907 [Vitis vinifera]
          Length = 735

 Score =  142 bits (359), Expect(2) = 2e-48
 Identities = 68/128 (53%), Positives = 96/128 (75%), Gaps = 2/128 (1%)
 Frame = -1

Query: 686 SLMYAMVCTRLDLAQAVSVVSRFMVNSGKEHRRAVKLIFRYLRGTSDIGLIYGSDTQ--S 513
           S+MY MVC+R DLA AVS++ R+M   GK H +AVK +F+YL GT  +GL+YG ++Q  +
Sbjct: 521 SVMYTMVCSRPDLAYAVSMIRRYMSCLGKPHWQAVKWLFQYLAGTRSLGLVYGGNSQLGT 580

Query: 512 LVAGYCDSDYATDVDSRRSMTGYVFTLCGFAVSWKATLQSTITLSTTEAKHMVLTEATKE 333
            + G+ D+DY  ++D+R+S+ GYVFT+ G AVSWKA LQS + LS TEA++M +TE  KE
Sbjct: 581 QLQGFVDADYPGNIDTRKSLIGYVFTVFGGAVSWKANLQSVVALSATEAEYMAMTEVVKE 640

Query: 332 GIWLKGLV 309
            IWLKG++
Sbjct: 641 VIWLKGII 648



 Score = 76.6 bits (187), Expect(2) = 2e-48
 Identities = 37/90 (41%), Positives = 57/90 (63%), Gaps = 3/90 (3%)
 Frame = -3

Query: 321 KGTSRDLRLQEDRTTIYCDNLGAICIVKDQVHHDRTKHIDVRFLFMR---TGKRIKVKKI 151
           KG   +L + + +  +YCDN  AI + K+Q  H+R+KHIDVR  F+R       I V K+
Sbjct: 645 KGIIEELAMYKGKVVVYCDNQSAIHLAKNQSFHERSKHIDVRLHFVRDIIAVGEIGVGKV 704

Query: 150 GTTENPADIFTKPVPYSKFKLCMDLLNISD 61
            T +NP+D+ TK +  +KFK C++L+N+ D
Sbjct: 705 PTKDNPSDMLTKSLNVTKFKHCLNLINMGD 734


>gb|AAD32759.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1356

 Score =  136 bits (342), Expect(2) = 3e-47
 Identities = 67/126 (53%), Positives = 86/126 (68%)
 Frame = -1

Query: 686  SLMYAMVCTRLDLAQAVSVVSRFMVNSGKEHRRAVKLIFRYLRGTSDIGLIYGSDTQSLV 507
            S+MYAM+ TR DLA  V ++SRFM    KEH   VK + RY++GT    L Y   +   +
Sbjct: 1144 SIMYAMLGTRPDLAYPVGIISRFMSQPIKEHWLGVKWVLRYIKGTLKTRLCYKKSSSFSI 1203

Query: 506  AGYCDSDYATDVDSRRSMTGYVFTLCGFAVSWKATLQSTITLSTTEAKHMVLTEATKEGI 327
             GYCD+DYA D+D RRS+TG VFTL G  +SWK+ LQ  +  STTE+++M LTEA KE I
Sbjct: 1204 VGYCDADYAADLDKRRSITGLVFTLGGNTISWKSGLQRVVAQSTTESEYMSLTEAVKEAI 1263

Query: 326  WLKGLV 309
            WLKGL+
Sbjct: 1264 WLKGLL 1269



 Score = 79.3 bits (194), Expect(2) = 3e-47
 Identities = 38/88 (43%), Positives = 58/88 (65%), Gaps = 3/88 (3%)
 Frame = -3

Query: 321  KGTSRDLRLQEDRTTIYCDNLGAICIVKDQVHHDRTKHIDVRFLFMR---TGKRIKVKKI 151
            KG  +D   ++    I+CD+  AI + K+ VHH+RTKHIDV++ F+R   +   ++V KI
Sbjct: 1266 KGLLKDFGYEQKSVEIFCDSQSAIALSKNNVHHERTKHIDVKYHFIREIISDGTVEVLKI 1325

Query: 150  GTTENPADIFTKPVPYSKFKLCMDLLNI 67
             T +NPADIFTK +  SKF+  ++LL +
Sbjct: 1326 STEKNPADIFTKVLAVSKFQAALNLLRV 1353