BLASTX nr result
ID: Achyranthes23_contig00028890
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Achyranthes23_contig00028890
(322 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002267315.1| PREDICTED: uncharacterized protein LOC100258... 69 8e-10
emb|CAN74120.1| hypothetical protein VITISV_034895 [Vitis vinifera] 69 8e-10
ref|XP_006478304.1| PREDICTED: single-stranded DNA-bindig protei... 65 1e-08
pdb|3R9Y|A Chain A, Crystal Structure Of Stwhy2 K67a (Form I) gi... 64 2e-08
pdb|3N1H|A Chain A, Crystal Structure Of Stwhy2 gi|302566180|pdb... 64 2e-08
ref|XP_002888827.1| ATWHY2 [Arabidopsis lyrata subsp. lyrata] gi... 64 2e-08
ref|XP_006352086.1| PREDICTED: Why2 protein [Solanum tuberosum] 63 5e-08
ref|XP_004250750.1| PREDICTED: single-stranded DNA-bindig protei... 63 5e-08
ref|XP_004250749.1| PREDICTED: single-stranded DNA-bindig protei... 63 5e-08
ref|NP_001275393.1| single-stranded DNA-bindig protein WHY2, mit... 63 5e-08
pdb|4KOP|A Chain A, Crystal Structure Of Why2 From Arabidopsis T... 62 6e-08
gb|AAG51881.1|AC016162_2 unknown protein; 79476-81015 [Arabidops... 62 6e-08
ref|NP_177282.2| single-stranded DNA-binding protein WHY2 [Arabi... 62 6e-08
gb|AFK37234.1| unknown [Lotus japonicus] 61 1e-07
ref|XP_006302759.1| hypothetical protein CARUB_v10020880mg [Caps... 61 2e-07
ref|XP_004173597.1| PREDICTED: single-stranded DNA-bindig protei... 61 2e-07
ref|XP_004141520.1| PREDICTED: single-stranded DNA-bindig protei... 61 2e-07
gb|EOY16919.1| Whirly 2, putative isoform 2 [Theobroma cacao] 60 2e-07
gb|EOY16918.1| Whirly 2, putative isoform 1 [Theobroma cacao] 60 2e-07
ref|XP_006302758.1| hypothetical protein CARUB_v10020880mg [Caps... 60 4e-07
>ref|XP_002267315.1| PREDICTED: uncharacterized protein LOC100258449 [Vitis vinifera]
gi|297734756|emb|CBI16990.3| unnamed protein product
[Vitis vinifera]
Length = 231
Score = 68.6 bits (166), Expect = 8e-10
Identities = 39/96 (40%), Positives = 48/96 (50%)
Frame = +3
Query: 33 NNDWVYERTSTVGQRGFTNERVYGDMSTAGQRNNNNDRIXXXXXXXXXXXXLCAEPVPPM 212
N W++ TS V T+ + N DR+ L PV P
Sbjct: 28 NPSWLHAFTSRVSLSTATDH--------FADKGNYPDRVYAPYCVYKGKASLTVYPVLPK 79
Query: 213 FSKVDSGGFKVKRAGYIKLTFSPAVGERKYDWQKKQ 320
FS++DSGG KV R G + L FSPAVGERKYDW+KKQ
Sbjct: 80 FSRLDSGGLKVDRHGVMMLQFSPAVGERKYDWEKKQ 115
>emb|CAN74120.1| hypothetical protein VITISV_034895 [Vitis vinifera]
Length = 185
Score = 68.6 bits (166), Expect = 8e-10
Identities = 39/96 (40%), Positives = 48/96 (50%)
Frame = +3
Query: 33 NNDWVYERTSTVGQRGFTNERVYGDMSTAGQRNNNNDRIXXXXXXXXXXXXLCAEPVPPM 212
N W++ TS V T+ + N DR+ L PV P
Sbjct: 28 NPSWLHAFTSRVSLSTATDH--------FADKGNYPDRVYAPYCVYKGKASLTVYPVLPK 79
Query: 213 FSKVDSGGFKVKRAGYIKLTFSPAVGERKYDWQKKQ 320
FS++DSGG KV R G + L FSPAVGERKYDW+KKQ
Sbjct: 80 FSRLDSGGLKVDRHGVMMLQFSPAVGERKYDWEKKQ 115
>ref|XP_006478304.1| PREDICTED: single-stranded DNA-bindig protein WHY2,
mitochondrial-like isoform X1 [Citrus sinensis]
Length = 240
Score = 64.7 bits (156), Expect = 1e-08
Identities = 29/42 (69%), Positives = 33/42 (78%)
Frame = +3
Query: 195 EPVPPMFSKVDSGGFKVKRAGYIKLTFSPAVGERKYDWQKKQ 320
+PV P F K+DSG KVKR G I LTF+PA+GERKYDW KKQ
Sbjct: 75 DPVLPTFMKLDSGDLKVKRKGVILLTFAPAIGERKYDWAKKQ 116
>pdb|3R9Y|A Chain A, Crystal Structure Of Stwhy2 K67a (Form I)
gi|347948613|pdb|3R9Z|A Chain A, Crystal Structure Of
Stwhy2 K67a (Form Ii) gi|347948614|pdb|3RA0|A Chain A,
Crystal Structure Of A Stwhy2 K67a-Dt32 Complex
Length = 178
Score = 63.9 bits (154), Expect = 2e-08
Identities = 33/71 (46%), Positives = 43/71 (60%)
Frame = +3
Query: 108 MSTAGQRNNNNDRIXXXXXXXXXXXXLCAEPVPPMFSKVDSGGFKVKRAGYIKLTFSPAV 287
M+ AG+R R+ L AEP P F+++DSGG K+ R G I LTF P+V
Sbjct: 1 MADAGKREG---RVFAPYSVFKGAAALSAEPRLPTFNRLDSGGVKLNRRGVIMLTFWPSV 57
Query: 288 GERKYDWQKKQ 320
GERKYDW+K+Q
Sbjct: 58 GERKYDWEKRQ 68
>pdb|3N1H|A Chain A, Crystal Structure Of Stwhy2 gi|302566180|pdb|3N1I|A Chain
A, Crystal Structure Of A Stwhy2-Ere32 Complex
gi|302566182|pdb|3N1J|A Chain A, Crystal Structure Of A
Stwhy2-Dt32 Complex gi|302566184|pdb|3N1K|A Chain A,
Crystal Structure Of A Stwhy2-Cere32 Complex
gi|302566186|pdb|3N1L|A Chain A, Crystal Structure Of A
Stwhy2-Rcere32 Complex
Length = 178
Score = 63.9 bits (154), Expect = 2e-08
Identities = 33/71 (46%), Positives = 43/71 (60%)
Frame = +3
Query: 108 MSTAGQRNNNNDRIXXXXXXXXXXXXLCAEPVPPMFSKVDSGGFKVKRAGYIKLTFSPAV 287
M+ AG+R R+ L AEP P F+++DSGG K+ R G I LTF P+V
Sbjct: 1 MADAGKREG---RVFAPYSVFKGKAALSAEPRLPTFNRLDSGGVKLNRRGVIMLTFWPSV 57
Query: 288 GERKYDWQKKQ 320
GERKYDW+K+Q
Sbjct: 58 GERKYDWEKRQ 68
>ref|XP_002888827.1| ATWHY2 [Arabidopsis lyrata subsp. lyrata]
gi|297334668|gb|EFH65086.1| ATWHY2 [Arabidopsis lyrata
subsp. lyrata]
Length = 242
Score = 63.9 bits (154), Expect = 2e-08
Identities = 35/96 (36%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Frame = +3
Query: 51 ERTSTVGQRGFTNERVYGDMSTAGQRNNNND------RIXXXXXXXXXXXXLCAEPVPPM 212
ER RGF + + ST G+ + D R+ L EPV P
Sbjct: 23 ERVKASTLRGFAS---WSSSSTPGRGFSGKDAPKPSGRLFAPYSIFKGKAALSVEPVLPS 79
Query: 213 FSKVDSGGFKVKRAGYIKLTFSPAVGERKYDWQKKQ 320
F+++DSG ++ R G + +TF PA+GERKYDW+KKQ
Sbjct: 80 FTEIDSGNLRIDRRGSLMMTFMPAIGERKYDWEKKQ 115
>ref|XP_006352086.1| PREDICTED: Why2 protein [Solanum tuberosum]
Length = 238
Score = 62.8 bits (151), Expect = 5e-08
Identities = 28/45 (62%), Positives = 35/45 (77%)
Frame = +3
Query: 186 LCAEPVPPMFSKVDSGGFKVKRAGYIKLTFSPAVGERKYDWQKKQ 320
L AEP P F+++DSGG K+ R G I LTF P+VGERKYDW+K+Q
Sbjct: 70 LSAEPRLPTFNRLDSGGVKLNRRGVIMLTFWPSVGERKYDWEKRQ 114
>ref|XP_004250750.1| PREDICTED: single-stranded DNA-bindig protein WHY2,
mitochondrial-like isoform 2 [Solanum lycopersicum]
Length = 235
Score = 62.8 bits (151), Expect = 5e-08
Identities = 28/45 (62%), Positives = 35/45 (77%)
Frame = +3
Query: 186 LCAEPVPPMFSKVDSGGFKVKRAGYIKLTFSPAVGERKYDWQKKQ 320
L AEP P F+++DSGG K+ R G I LTF P+VGERKYDW+K+Q
Sbjct: 67 LSAEPRLPTFNRLDSGGVKLNRRGVIMLTFWPSVGERKYDWEKRQ 111
>ref|XP_004250749.1| PREDICTED: single-stranded DNA-bindig protein WHY2,
mitochondrial-like isoform 1 [Solanum lycopersicum]
Length = 238
Score = 62.8 bits (151), Expect = 5e-08
Identities = 28/45 (62%), Positives = 35/45 (77%)
Frame = +3
Query: 186 LCAEPVPPMFSKVDSGGFKVKRAGYIKLTFSPAVGERKYDWQKKQ 320
L AEP P F+++DSGG K+ R G I LTF P+VGERKYDW+K+Q
Sbjct: 70 LSAEPRLPTFNRLDSGGVKLNRRGVIMLTFWPSVGERKYDWEKRQ 114
>ref|NP_001275393.1| single-stranded DNA-bindig protein WHY2, mitochondrial [Solanum
tuberosum] gi|426021772|sp|D9J034.1|WHY2_SOLTU RecName:
Full=Single-stranded DNA-bindig protein WHY2,
mitochondrial; AltName: Full=Protein WHIRLY 2;
Short=StWHY2; Flags: Precursor
gi|298359665|gb|ADI77438.1| Why2 protein [Solanum
tuberosum]
Length = 238
Score = 62.8 bits (151), Expect = 5e-08
Identities = 28/45 (62%), Positives = 35/45 (77%)
Frame = +3
Query: 186 LCAEPVPPMFSKVDSGGFKVKRAGYIKLTFSPAVGERKYDWQKKQ 320
L AEP P F+++DSGG K+ R G I LTF P+VGERKYDW+K+Q
Sbjct: 70 LSAEPRLPTFNRLDSGGVKLNRRGVIMLTFWPSVGERKYDWEKRQ 114
>pdb|4KOP|A Chain A, Crystal Structure Of Why2 From Arabidopsis Thaliana
gi|557805000|pdb|4KOP|B Chain B, Crystal Structure Of
Why2 From Arabidopsis Thaliana gi|557805001|pdb|4KOP|C
Chain C, Crystal Structure Of Why2 From Arabidopsis
Thaliana gi|557805002|pdb|4KOP|D Chain D, Crystal
Structure Of Why2 From Arabidopsis Thaliana
Length = 177
Score = 62.4 bits (150), Expect = 6e-08
Identities = 25/45 (55%), Positives = 34/45 (75%)
Frame = +3
Query: 186 LCAEPVPPMFSKVDSGGFKVKRAGYIKLTFSPAVGERKYDWQKKQ 320
L EPV P F+++DSG ++ R G + +TF PA+GERKYDW+KKQ
Sbjct: 24 LSVEPVLPSFTEIDSGNLRIDRRGSLMMTFMPAIGERKYDWEKKQ 68
>gb|AAG51881.1|AC016162_2 unknown protein; 79476-81015 [Arabidopsis thaliana]
Length = 237
Score = 62.4 bits (150), Expect = 6e-08
Identities = 25/45 (55%), Positives = 34/45 (75%)
Frame = +3
Query: 186 LCAEPVPPMFSKVDSGGFKVKRAGYIKLTFSPAVGERKYDWQKKQ 320
L EPV P F+++DSG ++ R G + +TF PA+GERKYDW+KKQ
Sbjct: 66 LSVEPVLPSFTEIDSGNLRIDRRGSLMMTFMPAIGERKYDWEKKQ 110
>ref|NP_177282.2| single-stranded DNA-binding protein WHY2 [Arabidopsis thaliana]
gi|75161474|sp|Q8VYF7.1|WHY2_ARATH RecName:
Full=Single-stranded DNA-binding protein WHY2,
mitochondrial; AltName: Full=Protein WHIRLY 2;
Short=AtWHY2; Flags: Precursor
gi|18175814|gb|AAL59932.1| unknown protein [Arabidopsis
thaliana] gi|21689867|gb|AAM67494.1| unknown protein
[Arabidopsis thaliana] gi|225898076|dbj|BAH30370.1|
hypothetical protein [Arabidopsis thaliana]
gi|332197060|gb|AEE35181.1| single-stranded DNA-binding
protein WHY2 [Arabidopsis thaliana]
Length = 238
Score = 62.4 bits (150), Expect = 6e-08
Identities = 25/45 (55%), Positives = 34/45 (75%)
Frame = +3
Query: 186 LCAEPVPPMFSKVDSGGFKVKRAGYIKLTFSPAVGERKYDWQKKQ 320
L EPV P F+++DSG ++ R G + +TF PA+GERKYDW+KKQ
Sbjct: 67 LSVEPVLPSFTEIDSGNLRIDRRGSLMMTFMPAIGERKYDWEKKQ 111
>gb|AFK37234.1| unknown [Lotus japonicus]
Length = 235
Score = 61.2 bits (147), Expect = 1e-07
Identities = 36/102 (35%), Positives = 52/102 (50%), Gaps = 5/102 (4%)
Frame = +3
Query: 30 SNNDWVYERTSTVGQRGFTNERVYGDMSTAGQ-----RNNNNDRIXXXXXXXXXXXXLCA 194
++ +WV E R N +V D STA + + DR+ +
Sbjct: 11 TSRNWVLEMEVLSSSR---NPQVR-DFSTAARETYVAKGYTTDRVFAPYYVYKGKAAMSL 66
Query: 195 EPVPPMFSKVDSGGFKVKRAGYIKLTFSPAVGERKYDWQKKQ 320
PV P F+K+DSG V+R G I + F+PA+GERKYDW+K+Q
Sbjct: 67 SPVLPTFTKLDSGALVVERRGSIMMVFTPAIGERKYDWEKRQ 108
>ref|XP_006302759.1| hypothetical protein CARUB_v10020880mg [Capsella rubella]
gi|482571469|gb|EOA35657.1| hypothetical protein
CARUB_v10020880mg [Capsella rubella]
Length = 235
Score = 60.8 bits (146), Expect = 2e-07
Identities = 32/92 (34%), Positives = 48/92 (52%)
Frame = +3
Query: 45 VYERTSTVGQRGFTNERVYGDMSTAGQRNNNNDRIXXXXXXXXXXXXLCAEPVPPMFSKV 224
+++ ST+ RGF + S + + R+ L EPV P F+++
Sbjct: 20 LFDGASTL--RGFASWSTGSGFSGKEEAAKPSGRVFAPYAIFKGKAALSVEPVLPTFTEI 77
Query: 225 DSGGFKVKRAGYIKLTFSPAVGERKYDWQKKQ 320
DSG ++ R G + +TF PA GERKYDW+KKQ
Sbjct: 78 DSGNLRLDRRGSLMMTFMPASGERKYDWEKKQ 109
>ref|XP_004173597.1| PREDICTED: single-stranded DNA-bindig protein WHY2,
mitochondrial-like, partial [Cucumis sativus]
Length = 156
Score = 60.8 bits (146), Expect = 2e-07
Identities = 28/45 (62%), Positives = 33/45 (73%)
Frame = +3
Query: 186 LCAEPVPPMFSKVDSGGFKVKRAGYIKLTFSPAVGERKYDWQKKQ 320
L EP P F+KV+SG F + R G I LTF+PAVGERKYDW +KQ
Sbjct: 26 LSMEPCMPTFTKVESGNFIMDRRGSIMLTFAPAVGERKYDWTRKQ 70
>ref|XP_004141520.1| PREDICTED: single-stranded DNA-bindig protein WHY2,
mitochondrial-like [Cucumis sativus]
Length = 241
Score = 60.8 bits (146), Expect = 2e-07
Identities = 28/45 (62%), Positives = 33/45 (73%)
Frame = +3
Query: 186 LCAEPVPPMFSKVDSGGFKVKRAGYIKLTFSPAVGERKYDWQKKQ 320
L EP P F+KV+SG F + R G I LTF+PAVGERKYDW +KQ
Sbjct: 72 LSMEPCMPTFTKVESGNFIMDRRGSIMLTFAPAVGERKYDWTRKQ 116
>gb|EOY16919.1| Whirly 2, putative isoform 2 [Theobroma cacao]
Length = 198
Score = 60.5 bits (145), Expect = 2e-07
Identities = 28/65 (43%), Positives = 37/65 (56%)
Frame = +3
Query: 126 RNNNNDRIXXXXXXXXXXXXLCAEPVPPMFSKVDSGGFKVKRAGYIKLTFSPAVGERKYD 305
+ N+ R+ P+ P FSK+DSG K+ R G + LTF PAVGERKYD
Sbjct: 48 KGNSTARVIAPYTVYKGKAAFSVTPLLPTFSKIDSGNLKLDRRGAMMLTFWPAVGERKYD 107
Query: 306 WQKKQ 320
W+K+Q
Sbjct: 108 WEKRQ 112
>gb|EOY16918.1| Whirly 2, putative isoform 1 [Theobroma cacao]
Length = 236
Score = 60.5 bits (145), Expect = 2e-07
Identities = 28/65 (43%), Positives = 37/65 (56%)
Frame = +3
Query: 126 RNNNNDRIXXXXXXXXXXXXLCAEPVPPMFSKVDSGGFKVKRAGYIKLTFSPAVGERKYD 305
+ N+ R+ P+ P FSK+DSG K+ R G + LTF PAVGERKYD
Sbjct: 48 KGNSTARVIAPYTVYKGKAAFSVTPLLPTFSKIDSGNLKLDRRGAMMLTFWPAVGERKYD 107
Query: 306 WQKKQ 320
W+K+Q
Sbjct: 108 WEKRQ 112
>ref|XP_006302758.1| hypothetical protein CARUB_v10020880mg [Capsella rubella]
gi|482571468|gb|EOA35656.1| hypothetical protein
CARUB_v10020880mg [Capsella rubella]
Length = 234
Score = 59.7 bits (143), Expect = 4e-07
Identities = 25/45 (55%), Positives = 33/45 (73%)
Frame = +3
Query: 186 LCAEPVPPMFSKVDSGGFKVKRAGYIKLTFSPAVGERKYDWQKKQ 320
L EPV P F+++DSG ++ R G + +TF PA GERKYDW+KKQ
Sbjct: 64 LSVEPVLPTFTEIDSGNLRLDRRGSLMMTFMPASGERKYDWEKKQ 108