BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00028789
         (1343 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEV42258.1| hypothetical protein [Beta vulgaris]                   495   e-137
gb|ABM55240.1| retrotransposon protein [Beta vulgaris]                484   e-134
gb|EOY00082.1| DNA/RNA polymerases superfamily protein [Theobrom...   455   e-125
gb|EOX94203.1| DNA/RNA polymerases superfamily protein [Theobrom...   454   e-125
gb|EMJ01464.1| hypothetical protein PRUPE_ppa015000mg [Prunus pe...   452   e-124
gb|EMJ21917.1| hypothetical protein PRUPE_ppa022673mg [Prunus pe...   446   e-123
gb|EOY03326.1| DNA/RNA polymerases superfamily protein [Theobrom...   446   e-122
gb|EMJ11440.1| hypothetical protein PRUPE_ppa014973mg, partial [...   439   e-120
gb|EOY21657.1| DNA/RNA polymerases superfamily protein [Theobrom...   435   e-119
gb|AAT38724.1| Putative retrotransposon protein, identical [Sola...   434   e-119
gb|AAT38744.1| Putative gag-pol polyprotein, identical [Solanum ...   433   e-119
gb|ABB46921.2| retrotransposon protein, putative, Ty3-gypsy subc...   425   e-116
gb|AAM01169.1|AC113336_21 Putative retroelement [Oryza sativa Ja...   425   e-116
ref|XP_004488407.1| PREDICTED: uncharacterized protein LOC101502...   423   e-116
emb|CAH66289.1| OSIGBa0161P06.6 [Oryza sativa Indica Group]           422   e-115
emb|CAH66284.1| OSIGBa0161P06.1 [Oryza sativa Indica Group]           421   e-115
gb|AAL31078.1|AC091749_7 putative polyprotein [Oryza sativa Japo...   421   e-115
gb|AAP53008.2| retrotransposon protein, putative, Ty3-gypsy subc...   421   e-115
gb|AAT39297.2| Gag-pol protein, putative [Solanum demissum]           421   e-115
gb|ABF95974.1| retrotransposon protein, putative, Ty3-gypsy subc...   421   e-115

>gb|AEV42258.1| hypothetical protein [Beta vulgaris]
          Length = 1553

 Score =  495 bits (1275), Expect = e-137
 Identities = 246/441 (55%), Positives = 310/441 (70%), Gaps = 4/441 (0%)
 Frame = +2

Query: 14   QTNQSARIYVMTQQEAEANPSVISGTFTVNGVSTHTLFDTGAERSFVSTRFANKARLSPI 193
            Q     ++Y+MT +E EA   V++GTF++N      LFD+GA  SF++        L   
Sbjct: 373  QDKGKGKLYMMTAREEEARRDVVTGTFSINSTPVKVLFDSGASLSFIAHATVRNLTLVES 432

Query: 194  DGVPTLVTLPNGQGIPCPRSFENVTLKIAGVDFTFNLIQFDLMEFDVILGMDWLSKHRAR 373
            + +   + +P+G+ + C + F  V LKI    F  +LI+F+L   D+ILGMDWL K+ AR
Sbjct: 433  ESISMPIVIPSGETVNCSKRFLKVPLKIGEGYFPSDLIEFNLSNLDIILGMDWLGKYMAR 492

Query: 374  FDCRKQKVSIVSSTGRRVSYKGTVSKPGTKWIYAPKLRKLSKKGHLVYLCCVKDLTLEE- 550
             DC  QKV +   +G+RVSY+    +PG K I A +L+    KG  +++C V+ +  +  
Sbjct: 493  IDCDAQKVELKDPSGKRVSYRRIPREPGIKVINALQLKNYVDKGWPLFMCSVRRVEDDPL 552

Query: 551  KLNDIPVVREFLDVFPEDLPRLPPQRDVEFGIDLVLGTGSISKTTYRMAPAXXXXXXXXX 730
            +  D+P+VREF DVFPE++P +PP+RDVEF +DLV GTG ISK TYRMAPA         
Sbjct: 553  RPEDVPIVREFQDVFPEEIPGMPPRRDVEFTVDLVPGTGPISKATYRMAPAEMNELKNQL 612

Query: 731  XXX---GFIRPSVFPWGAPVLFVRKKDESLRLCIDYRELNKVTIKNKYPLPRIEDLFDQL 901
                  G+IRPS+ PWGAPVLFV+KKD SLRLCIDYRELN VT+KNKYPLPRI+DLFDQL
Sbjct: 613  EELLDKGYIRPSMSPWGAPVLFVKKKDGSLRLCIDYRELNNVTVKNKYPLPRIDDLFDQL 672

Query: 902  KGASVFSKIDLRSGYHQLPVKPEDIHKTAFRTRYGHYEFVVMPFGLTNAPAVFIDQMNRT 1081
            +GA +FSKIDLRSGYHQL +   DI KTAFRTRYGHYEF VMPFGLTNAPAVF+D MNR 
Sbjct: 673  QGAGMFSKIDLRSGYHQLRIVDHDIPKTAFRTRYGHYEFTVMPFGLTNAPAVFMDLMNRI 732

Query: 1082 FHEYLDKCVVVFIDDILVYSKNEADHKHHLRQILMVLRKQKWYVKLSKCEFWLKEVAFLG 1261
            F  YLDK VVVFIDDIL+YSKN+ +H+ HLR IL  LR  + Y K SKCEFWL+ V+FLG
Sbjct: 733  FRPYLDKFVVVFIDDILIYSKNKEEHEDHLRVILQTLRDNQLYAKFSKCEFWLERVSFLG 792

Query: 1262 HVISKEGIQVDPAKVKAILEW 1324
            H ISKEG+ VDPAK+KA+ EW
Sbjct: 793  HFISKEGVLVDPAKIKAVSEW 813


>gb|ABM55240.1| retrotransposon protein [Beta vulgaris]
          Length = 1501

 Score =  484 bits (1247), Expect = e-134
 Identities = 245/448 (54%), Positives = 313/448 (69%), Gaps = 5/448 (1%)
 Frame = +2

Query: 14   QTNQSARIYVMTQQEAEANPSVISGTFTVNGVSTHTLFDTGAERSFVSTRFANKARLSPI 193
            Q   + +++VM+  EAE +  V++G F++N V   TLFD+GA  SF+S        L   
Sbjct: 340  QNKPAGKVFVMSHNEAERSADVVTGNFSINSVFVKTLFDSGATYSFISPSVLKSLGLVEH 399

Query: 194  DGVPTLVTLPNGQGIPCPRSFENVTLKIAGVDFTFNLIQFDLMEFDVILGMDWLSKHRAR 373
            + +   V++P G+ + C + F+N+ LKI G  F   LI+F+L + DVILGM+WLS ++AR
Sbjct: 400  ESIDLSVSIPTGEVVKCTKLFKNLPLKIGGSVFPSELIEFNLGDLDVILGMNWLSLYKAR 459

Query: 374  FDCRKQKVSIVSSTGRRVSYKGTVSKPGTKWIYAPKLRKLSKKGHLVYLCCVKDLTLEE- 550
             DC  QKV + + +G+  SY+          I A +++KL +KG  ++ C V+D++ E  
Sbjct: 460  IDCEVQKVVLRNPSGKFTSYRRFGKPKNFGVISALQVQKLMRKGCELFFCSVQDVSKEAE 519

Query: 551  -KLNDIPVVREFLDVFPEDLPRLPPQRDVEFGIDLVLGTGSISKTTYRMAP---AXXXXX 718
             KL D+ +V EF+DVFP ++  +PP R VEF IDLV GT  ISK  YRMAP   +     
Sbjct: 520  LKLEDVSIVNEFMDVFPSEISGMPPARAVEFTIDLVPGTAPISKAPYRMAPPEMSELKTQ 579

Query: 719  XXXXXXXGFIRPSVFPWGAPVLFVRKKDESLRLCIDYRELNKVTIKNKYPLPRIEDLFDQ 898
                   G+IRPS  PWGAPVLFV+KKD S+RLCIDYRELN VTIKNKYPLPRI+DLFDQ
Sbjct: 580  LQELLDKGYIRPSASPWGAPVLFVKKKDGSMRLCIDYRELNNVTIKNKYPLPRIDDLFDQ 639

Query: 899  LKGASVFSKIDLRSGYHQLPVKPEDIHKTAFRTRYGHYEFVVMPFGLTNAPAVFIDQMNR 1078
            L GASVFSKIDLRSGYHQL V  +D+ KTAFRTRYGHYEF VMPFGLTNAPA+F+D MNR
Sbjct: 640  LNGASVFSKIDLRSGYHQLRVADKDVPKTAFRTRYGHYEFTVMPFGLTNAPAIFMDLMNR 699

Query: 1079 TFHEYLDKCVVVFIDDILVYSKNEADHKHHLRQILMVLRKQKWYVKLSKCEFWLKEVAFL 1258
             FHE+LDK VVVFIDDIL+YS+NE +H  HLR IL  LRK + Y K SKCEF L++VAFL
Sbjct: 700  IFHEFLDKFVVVFIDDILIYSRNETEHDEHLRIILETLRKNQLYAKFSKCEFRLEKVAFL 759

Query: 1259 GHVISKEGIQVDPAKVKAILEWVRTTSV 1342
            GH +SKEG+ VDPAK++A+ EW    SV
Sbjct: 760  GHFVSKEGVSVDPAKIQAVSEWPTPKSV 787


>gb|EOY00082.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
          Length = 1515

 Score =  455 bits (1170), Expect = e-125
 Identities = 229/449 (51%), Positives = 312/449 (69%), Gaps = 6/449 (1%)
 Frame = +2

Query: 14   QTNQSARIYVMTQQEAEANPSVISGTFTVNGVSTHTLFDTGAERSFVSTRFAN--KARLS 187
            QT  S R++ +T+ EA+  P  ++GT ++     + L D+G++RS+VST F +     LS
Sbjct: 357  QTRTSTRVFAVTEDEAQVRPGAVTGTMSLFDKDAYVLIDSGSDRSYVSTTFVSIVDRNLS 416

Query: 188  PIDGVPTLVTLPNGQGIPCPRSFENVTLKIAGVDFTFNLIQFDLMEFDVILGMDWLSKHR 367
            P++    + T P G+ +     + +  +++   +F  +LI  ++++FD+ILGMDWL+ HR
Sbjct: 417  PLEEEIVIHT-PLGEKLVRNSCYRDCGVRVGEEEFRGDLIPLEILDFDLILGMDWLTAHR 475

Query: 368  ARFDCRKQKVSIVSSTGRRVSYKGTVSKPGTKWIYAPKLRKLSKKGHLVYLCCVKDLTL- 544
            A  DC ++++ + +S G  + + G      +  I A K  KL +KG+  YL  V D +  
Sbjct: 476  ANVDCFRKEIVLRNSEGAEIVFVGKRRVLPSCVISAIKASKLVQKGYSTYLAYVIDTSKG 535

Query: 545  EEKLNDIPVVREFLDVFPEDLPRLPPQRDVEFGIDLVLGTGSISKTTYRMAPAXXXXXXX 724
            E KL D+ +V EF DVFP+DLP LPP R++EF IDL+ GT  IS   YRMAP        
Sbjct: 536  EPKLEDVSIVSEFPDVFPDDLPGLPPDRELEFPIDLLPGTAPISIPPYRMAPTELKELKV 595

Query: 725  XXXXX---GFIRPSVFPWGAPVLFVRKKDESLRLCIDYRELNKVTIKNKYPLPRIEDLFD 895
                    GFIRPS+ PWGAP+LFV+KKD +LRLCID R+LN++TIKNKYPLPRI+DLFD
Sbjct: 596  QLQELVDKGFIRPSISPWGAPILFVKKKDGTLRLCIDCRQLNRMTIKNKYPLPRIDDLFD 655

Query: 896  QLKGASVFSKIDLRSGYHQLPVKPEDIHKTAFRTRYGHYEFVVMPFGLTNAPAVFIDQMN 1075
            QL+GA+VFSK+DLRSGYHQL +K +D+ KTAFRTRYGHYEF+VMPFGLTNAPA F+D MN
Sbjct: 656  QLQGATVFSKVDLRSGYHQLRIKEQDVPKTAFRTRYGHYEFLVMPFGLTNAPAAFMDLMN 715

Query: 1076 RTFHEYLDKCVVVFIDDILVYSKNEADHKHHLRQILMVLRKQKWYVKLSKCEFWLKEVAF 1255
            R FH YLDK V+VFIDDILVYS++  +H  HLR +L  LR+++ Y K SKCEFWL+EV F
Sbjct: 716  RVFHPYLDKFVIVFIDDILVYSRDNDEHAAHLRIVLQTLRERQLYAKFSKCEFWLQEVVF 775

Query: 1256 LGHVISKEGIQVDPAKVKAILEWVRTTSV 1342
            LGH++S+ GI VDP KV+AIL+W +  +V
Sbjct: 776  LGHIVSRTGIYVDPKKVEAILQWEQPKTV 804


>gb|EOX94203.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
          Length = 1336

 Score =  454 bits (1167), Expect = e-125
 Identities = 231/449 (51%), Positives = 313/449 (69%), Gaps = 6/449 (1%)
 Frame = +2

Query: 14   QTNQSARIYVMTQQEAEANPSVISGTFTVNGVSTHTLFDTGAERSFVSTRFANKA--RLS 187
            QT  S R++ +T+ EA   P  ++GT ++     + L D+G++RS+VST FA+ A   LS
Sbjct: 320  QTRTSTRVFAVTEDEAWVRPGAVTGTMSLFDKDAYVLIDSGSDRSYVSTTFASIAARNLS 379

Query: 188  PIDGVPTLVTLPNGQGIPCPRSFENVTLKIAGVDFTFNLIQFDLMEFDVILGMDWLSKHR 367
            P++    + T P G+ +     + +  +++   +F  +LI   +++FD+ILGMDWL+ HR
Sbjct: 380  PLEEEIVIHT-PLGEKLVRNSCYRDCGVRVGEEEFRGDLIPLKILDFDLILGMDWLTTHR 438

Query: 368  ARFDCRKQKVSIVSSTGRRVSYKGTVSKPGTKWIYAPKLRKLSKKGHLVYLCCVKDLTL- 544
            A  DC +++V + +S G  + + G      +  I A K  KL +KG+  YL  V D +  
Sbjct: 439  ANVDCFRKEVVLRNSEGAEIVFVGKHRVLPSCVISAIKASKLVQKGYPTYLAYVIDTSKG 498

Query: 545  EEKLNDIPVVREFLDVFPEDLPRLPPQRDVEFGIDLVLGTGSISKTTYRMAPAXXXXXXX 724
            E KL D+P+V EF DVFP+DLP LPP R++EF IDL+ GT  IS   YRMAPA       
Sbjct: 499  EPKLEDVPIVSEFPDVFPDDLPGLPPDRELEFPIDLLPGTAPISIPPYRMAPAELKELKV 558

Query: 725  XXXXX---GFIRPSVFPWGAPVLFVRKKDESLRLCIDYRELNKVTIKNKYPLPRIEDLFD 895
                    GFIRPS+ PWGAP+LFV+KKD +LRLCIDYR+LN++TIKNKYPLPRI+D+FD
Sbjct: 559  QLQELVDKGFIRPSISPWGAPILFVKKKDGTLRLCIDYRQLNRMTIKNKYPLPRIDDIFD 618

Query: 896  QLKGASVFSKIDLRSGYHQLPVKPEDIHKTAFRTRYGHYEFVVMPFGLTNAPAVFIDQMN 1075
            QL+GA+VFSK++LRSGYHQL +K +D+ KT FRTRYGHYEF+VMPFGLTNAPA F+D M+
Sbjct: 619  QLQGATVFSKVNLRSGYHQLRIKEQDVLKTEFRTRYGHYEFLVMPFGLTNAPATFMDLMS 678

Query: 1076 RTFHEYLDKCVVVFIDDILVYSKNEADHKHHLRQILMVLRKQKWYVKLSKCEFWLKEVAF 1255
            R FH YLDK V+VFIDDILVY ++  +H  HLR +L  LR+++ Y K SKCEFWL+EV F
Sbjct: 679  RVFHPYLDKFVIVFIDDILVYLRDNDEHAAHLRIVLQTLRERQLYAKFSKCEFWLQEVVF 738

Query: 1256 LGHVISKEGIQVDPAKVKAILEWVRTTSV 1342
            LGHV+S+ GI VDP KV+AIL+W +  +V
Sbjct: 739  LGHVVSRTGIYVDPKKVEAILQWEQPKTV 767


>gb|EMJ01464.1| hypothetical protein PRUPE_ppa015000mg [Prunus persica]
          Length = 1493

 Score =  452 bits (1162), Expect = e-124
 Identities = 244/453 (53%), Positives = 306/453 (67%), Gaps = 7/453 (1%)
 Frame = +2

Query: 5    KPIQTNQSARIYVMTQQEAEANPSVISGTFTVNGVSTHTLFDTGAERSFVSTRFAN--KA 178
            +P ++   AR++ MTQQEA A P VI+G   + G     L D GA  SFV+  F      
Sbjct: 340  QPGRSTTQARVFSMTQQEAYATPDVITGMIPIFGYLARVLIDPGATHSFVAHNFIPYISI 399

Query: 179  RLSPIDGVPTLVTLPNGQGIPCPRSFENVTLKIAGVDFTFNLIQFDLMEFDVILGMDWLS 358
            R +PI G  + ++LP G+ +   R F N  +++       NLI  DL++ D+ILGMDWL 
Sbjct: 400  RPTPITGSFS-ISLPTGEVLYADRVFRNCFVQVDDAWLEANLIPLDLVDLDIILGMDWLE 458

Query: 359  KHRARFDCRKQKVSIVSSTGRRVSYKGTVSKPGTKWIYAPKLRKLSKKGHLVYLCCVKDL 538
            KH A  DC +++V++ S    +V+++G      T  I A   +KL KKG+  YL  + D 
Sbjct: 459  KHHASVDCFRKEVTLRSPGQPKVTFRGERRVLPTCLISAITAKKLLKKGYEGYLAHIID- 517

Query: 539  TLEEKLN--DIPVVREFLDVFPEDLPRLPPQRDVEFGIDLVLGTGSISKTTYRMAPAXXX 712
            T E  LN  DIPVV EF ++FP+DLP LPP+R++EF ID + GT  I +T YRMAPA   
Sbjct: 518  TREITLNLEDIPVVCEFPNIFPDDLPGLPPKREIEFTIDFLPGTNPIYQTPYRMAPAELR 577

Query: 713  XXXXXXXXX---GFIRPSVFPWGAPVLFVRKKDESLRLCIDYRELNKVTIKNKYPLPRIE 883
                         FIRPSV PWGAPVLFVRK+D ++RLCIDYR+LNKVTI+N+YPLPRI+
Sbjct: 578  ELKIQLQELVDLRFIRPSVSPWGAPVLFVRKQDGTMRLCIDYRQLNKVTIRNRYPLPRID 637

Query: 884  DLFDQLKGASVFSKIDLRSGYHQLPVKPEDIHKTAFRTRYGHYEFVVMPFGLTNAPAVFI 1063
            DLFDQLKGA  FSKIDLRSGYHQL ++ EDI  TA RTRYGHYEF+VMPFGLTNAPA F+
Sbjct: 638  DLFDQLKGAKYFSKIDLRSGYHQLRIREEDIPNTALRTRYGHYEFLVMPFGLTNAPAAFM 697

Query: 1064 DQMNRTFHEYLDKCVVVFIDDILVYSKNEADHKHHLRQILMVLRKQKWYVKLSKCEFWLK 1243
            D MNR F  YLD  V+VFIDDILVYS+    HK HLR +L  LR+++ Y K SKC+FWL 
Sbjct: 698  DLMNRVFRPYLDHFVIVFIDDILVYSQTLEGHKKHLRVVLRTLRRKQLYAKFSKCQFWLD 757

Query: 1244 EVAFLGHVISKEGIQVDPAKVKAILEWVRTTSV 1342
             V FLGHVIS EGI VDP KV+AI+ WV++TSV
Sbjct: 758  IVVFLGHVISAEGIYVDPQKVEAIVNWVQSTSV 790


>gb|EMJ21917.1| hypothetical protein PRUPE_ppa022673mg [Prunus persica]
          Length = 1506

 Score =  446 bits (1148), Expect = e-123
 Identities = 234/449 (52%), Positives = 304/449 (67%), Gaps = 6/449 (1%)
 Frame = +2

Query: 14   QTNQSARIYVMTQQEAEANPSVISGTFTVNGVSTHTLFDTGAERSFVSTRFANKA--RLS 187
            ++  + R+Y M+QQEA A+P VI+G   V G+    L D GA  SFV+  FA+ A  RLS
Sbjct: 416  RSRATGRVYNMSQQEAHASPEVITGILPVFGIPARVLIDPGATHSFVTPSFAHNANVRLS 475

Query: 188  PIDGVPTLVTLPNGQGIPCPRSFENVTLKIAGVDFTFNLIQFDLMEFDVILGMDWLSKHR 367
             +      +++P G+       + + T+ +  V F  +LI   +++ DVILGMDWL++HR
Sbjct: 476  ALQ-TELAISVPTGEIFRVGTVYRDSTVLVGNVFFEADLIPLGMVDLDVILGMDWLARHR 534

Query: 368  ARFDCRKQKVSIVSSTGRRVSYKGTVSKPGTKWIYAPKLRKLSKKGHLVYLCCVKDLTLE 547
            A  DC +++V   S     V++ G      +  I A   ++L +KG   Y+  V D    
Sbjct: 535  ASVDCFRKEVVFRSPGRPEVTFYGKRRVLPSYLISAMTAKRLLRKGCSGYIAHVIDTRDN 594

Query: 548  E-KLNDIPVVREFLDVFPEDLPRLPPQRDVEFGIDLVLGTGSISKTTYRMAPAXXXXXXX 724
            E +L DIPVV++F DVFPEDLP LPP R++EF I+L  GT  IS+  YRMAPA       
Sbjct: 595  ELRLEDIPVVQDFSDVFPEDLPGLPPHREIEFVIELAPGTNLISQAPYRMAPAELRELKT 654

Query: 725  XXXXX---GFIRPSVFPWGAPVLFVRKKDESLRLCIDYRELNKVTIKNKYPLPRIEDLFD 895
                    GFIRPS  PWGA VLFV+KKD ++RLCIDYR+LNK+T++N+YPLPRI+DLFD
Sbjct: 655  QLQELVDKGFIRPSFSPWGALVLFVKKKDGTMRLCIDYRQLNKITVQNRYPLPRIDDLFD 714

Query: 896  QLKGASVFSKIDLRSGYHQLPVKPEDIHKTAFRTRYGHYEFVVMPFGLTNAPAVFIDQMN 1075
            QLKGA VFSKIDLRSGYHQL  + ED+ KTAFRTRYGHYEF+VMPFGLTNAPA F+D MN
Sbjct: 715  QLKGAKVFSKIDLRSGYHQLWGREEDVPKTAFRTRYGHYEFLVMPFGLTNAPAAFMDLMN 774

Query: 1076 RTFHEYLDKCVVVFIDDILVYSKNEADHKHHLRQILMVLRKQKWYVKLSKCEFWLKEVAF 1255
            R F  YLD+ V+VFIDDILVYSK++  H  HL  +L  LR+++ Y K SKC+FWL  V+F
Sbjct: 775  RVFRRYLDRFVIVFIDDILVYSKSQKAHMKHLNLVLRTLRRRQLYAKFSKCQFWLDRVSF 834

Query: 1256 LGHVISKEGIQVDPAKVKAILEWVRTTSV 1342
            LGHVIS EGI VDP K++A++ W+R TSV
Sbjct: 835  LGHVISAEGIYVDPQKIEAVVNWLRPTSV 863


>gb|EOY03326.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
          Length = 1447

 Score =  446 bits (1146), Expect = e-122
 Identities = 236/445 (53%), Positives = 302/445 (67%), Gaps = 7/445 (1%)
 Frame = +2

Query: 29   ARIYVMTQQEAEANPSVISGTFTVNGVSTHTLFDTGAERSFVSTRFANKARLSPIDGVPT 208
            AR++ +TQQEA+ + +V+SG  +V  ++   LFD GA  SF+ST FA++     +     
Sbjct: 331  ARVFALTQQEAQTSNAVVSGILSVCNMNARVLFDPGATHSFISTCFASRLGRGRVRREEQ 390

Query: 209  LV-TLPNGQGIPCPRSFENVTLKIAGVDFTFNLIQFDLMEFDVILGMDWLSKHRARFDCR 385
            LV + P  +       +E+  +++   D + NL+  D ++FDVILGM+WLS   A  DC 
Sbjct: 391  LVVSTPLKEIFVAEWEYESCVVRVKDKDTSVNLVVLDTLDFDVILGMNWLSPCHASVDCY 450

Query: 386  KQKVSIVSSTGRRVSYKGTVSKPGTKWIYAPKLRKLSKKGHLVYLCCVKDLTLEEKLNDI 565
             + V          S +G  S   T  I     R+L ++G + YL  VKD   + K+ D+
Sbjct: 451  HKLVRFDFPGEPSFSIQGDRSNAPTNLISVISARRLLRQGCIGYLAVVKDS--QAKIGDV 508

Query: 566  P---VVREFLDVFPEDLPRLPPQRDVEFGIDLVLGTGSISKTTYRMAPAXXXXXXXXXXX 736
                VV+EF+DVFPE+LP LPP+R+VEF IDL+  T  IS   YRMAPA           
Sbjct: 509  TQVSVVKEFVDVFPEELPSLPPEREVEFCIDLIPDTRPISIPPYRMAPAELKELKDQLED 568

Query: 737  X---GFIRPSVFPWGAPVLFVRKKDESLRLCIDYRELNKVTIKNKYPLPRIEDLFDQLKG 907
                GFIRPSV PWGAPVLFV+KKD SLRLCIDYR+LNKVT+KNKYPLPRI+DLFDQL+G
Sbjct: 569  LLDKGFIRPSVSPWGAPVLFVKKKDGSLRLCIDYRQLNKVTVKNKYPLPRIDDLFDQLQG 628

Query: 908  ASVFSKIDLRSGYHQLPVKPEDIHKTAFRTRYGHYEFVVMPFGLTNAPAVFIDQMNRTFH 1087
            A  FSKIDLRSGYHQL ++ EDI KTAFRTRYGHYEF+VM FGLTNAPA F+D MNR F 
Sbjct: 629  AQCFSKIDLRSGYHQLRIRNEDIPKTAFRTRYGHYEFLVMSFGLTNAPAAFMDLMNRVFK 688

Query: 1088 EYLDKCVVVFIDDILVYSKNEADHKHHLRQILMVLRKQKWYVKLSKCEFWLKEVAFLGHV 1267
             YLDK VVVFIDDIL+YSK+  +H+ HL+ +L +LR+ + Y K SKCEFWL+ VAFLGHV
Sbjct: 689  PYLDKFVVVFIDDILIYSKSREEHEQHLKIVLQILREHRLYAKFSKCEFWLESVAFLGHV 748

Query: 1268 ISKEGIQVDPAKVKAILEWVRTTSV 1342
            +SKEGI+VD  K++A+ +W R TSV
Sbjct: 749  VSKEGIRVDTKKIEAVEKWPRPTSV 773


>gb|EMJ11440.1| hypothetical protein PRUPE_ppa014973mg, partial [Prunus persica]
          Length = 747

 Score =  439 bits (1128), Expect = e-120
 Identities = 226/449 (50%), Positives = 301/449 (67%), Gaps = 6/449 (1%)
 Frame = +2

Query: 14   QTNQSARIYVMTQQEAEANPSVISGTFTVNGVSTHTLFDTGAERSFVSTRFANKA--RLS 187
            ++  + R+Y M+QQEA A+P VI+G   V G+    L D GA  SFV+  FA+ A  RLS
Sbjct: 148  RSRATGRVYNMSQQEAHASPDVITGILPVFGIPARVLIDPGATHSFVTPSFAHNANVRLS 207

Query: 188  PIDGVPTLVTLPNGQGIPCPRSFENVTLKIAGVDFTFNLIQFDLMEFDVILGMDWLSKHR 367
             +      +++P G+       + + T+ +  V    +LI   +++ DVILGMDWL++HR
Sbjct: 208  ALQ-TELAISVPTGEIFRIGTVYRDSTVMVGNVFLEADLIPLGMVDLDVILGMDWLARHR 266

Query: 368  ARFDCRKQKVSIVSSTGRRVSYKGTVSKPGTKWIYAPKLRKLSKKGHLVYLCCVKDLTLE 547
            A  DC +++V   S     V++ G      +  I A   ++L +KG   Y+  V D    
Sbjct: 267  ASVDCFRKEVVFRSPGRHEVTFYGERRVLPSCLISAMTAKRLLRKGCSGYIAHVIDTRDN 326

Query: 548  E-KLNDIPVVREFLDVFPEDLPRLPPQRDVEFGIDLVLGTGSISKTTYRMAPAXXXXXXX 724
              +L DIP++++F DVFPEDLP +PPQR++EF I+L  GT  IS+  YRMAPA       
Sbjct: 327  GLRLEDIPIIQDFPDVFPEDLPGVPPQREIEFVIELAPGTNPISQAPYRMAPAELRELKT 386

Query: 725  XXXXX---GFIRPSVFPWGAPVLFVRKKDESLRLCIDYRELNKVTIKNKYPLPRIEDLFD 895
                    GFI PS  PWGAPVLFV+KKD ++RLC+DYR+LNK+T++N+YPLPRI+DLFD
Sbjct: 387  QLQELVDKGFICPSFSPWGAPVLFVKKKDGTMRLCVDYRQLNKITVRNRYPLPRIDDLFD 446

Query: 896  QLKGASVFSKIDLRSGYHQLPVKPEDIHKTAFRTRYGHYEFVVMPFGLTNAPAVFIDQMN 1075
            QLKGA VFSKIDLRSGYHQL V+ ED+ KTAFRTRYGHYEF+VMPFGLTN PA F+D MN
Sbjct: 447  QLKGAKVFSKIDLRSGYHQLRVREEDVPKTAFRTRYGHYEFLVMPFGLTNVPAAFMDLMN 506

Query: 1076 RTFHEYLDKCVVVFIDDILVYSKNEADHKHHLRQILMVLRKQKWYVKLSKCEFWLKEVAF 1255
            R F  YLD+ V+VFIDDILVYSK++  H  HL  +L  LR+++ Y K  K +FWL  V+F
Sbjct: 507  RVFRRYLDRFVIVFIDDILVYSKSQKAHMKHLNLVLRTLRRRQLYAKFGKYQFWLDRVSF 566

Query: 1256 LGHVISKEGIQVDPAKVKAILEWVRTTSV 1342
            LGHVIS EGI VDP K++A++ W+R TS+
Sbjct: 567  LGHVISAEGIYVDPQKIEAVVNWLRPTSI 595


>gb|EOY21657.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
          Length = 1188

 Score =  435 bits (1119), Expect = e-119
 Identities = 225/405 (55%), Positives = 289/405 (71%), Gaps = 6/405 (1%)
 Frame = +2

Query: 128  DTGAERSFVSTRFAN--KARLSPIDGVPTLVTLPNGQGIPCPRSFENVTLKIAGVDFTFN 301
            D+G++RS+VST FA+     LSP++G   +V    G+ +     + +  +++   +F  +
Sbjct: 386  DSGSDRSYVSTTFASITNRNLSPLEG-EIIVHTHLGEQLIRNTCYRDCGVRVGEEEFRGD 444

Query: 302  LIQFDLMEFDVILGMDWLSKHRARFDCRKQKVSIVSSTGRRVSYKGTVSKPGTKWIYAPK 481
            LI  ++++FD+ILGMDWL+ H A  DC +++V + +S G  + + G      +  I A K
Sbjct: 445  LIPLEILDFDLILGMDWLTAHWANMDCFRKEVVLRNSEGAEIVFVGERRVLPSCVISAIK 504

Query: 482  LRKLSKKGHLVYLCCVKDLTL-EEKLNDIPVVREFLDVFPEDLPRLPPQRDVEFGIDLVL 658
              KL +KG+  YL  V D +  E KL D+P+V EF DVF +DLP LPP R++EF IDL+ 
Sbjct: 505  ASKLVQKGYPAYLAYVIDTSKGEPKLEDVPIVSEFPDVFSDDLPGLPPDRELEFPIDLLP 564

Query: 659  GTGSISKTTYRMAPAXXXXXXXXXXXX---GFIRPSVFPWGAPVLFVRKKDESLRLCIDY 829
             T  IS   YRMAPA               GFIRPS+ PWGAPVLFV+KKD +LRLCI Y
Sbjct: 565  STAPISIPPYRMAPAELKELKVQLQDLVDKGFIRPSISPWGAPVLFVKKKDGTLRLCIYY 624

Query: 830  RELNKVTIKNKYPLPRIEDLFDQLKGASVFSKIDLRSGYHQLPVKPEDIHKTAFRTRYGH 1009
            R+LN+VTIKNKYPLPRI+DLFDQL+GA VFSKIDLRSGY+QL +K +D+HKTAFRTRYGH
Sbjct: 625  RQLNRVTIKNKYPLPRIDDLFDQLRGAMVFSKIDLRSGYYQLRIKEQDVHKTAFRTRYGH 684

Query: 1010 YEFVVMPFGLTNAPAVFIDQMNRTFHEYLDKCVVVFIDDILVYSKNEADHKHHLRQILMV 1189
            YEF+VMPFGLTNAP VF+D MNR FH YLDK V+VFIDDILVYSKN+ +H  HLR +L  
Sbjct: 685  YEFLVMPFGLTNAPTVFMDLMNRVFHPYLDKFVIVFIDDILVYSKNDDEHAAHLRIVLQT 744

Query: 1190 LRKQKWYVKLSKCEFWLKEVAFLGHVISKEGIQVDPAKVKAILEW 1324
            LR+++ YVK SKCEFWLKEV FLGHV+S  GI VDP K++AIL+W
Sbjct: 745  LRERQLYVKFSKCEFWLKEVVFLGHVVSGAGIYVDPKKIEAILQW 789


>gb|AAT38724.1| Putative retrotransposon protein, identical [Solanum demissum]
          Length = 1602

 Score =  434 bits (1116), Expect = e-119
 Identities = 228/439 (51%), Positives = 293/439 (66%), Gaps = 3/439 (0%)
 Frame = +2

Query: 32   RIYVMTQQ-EAEANPSVISGTFTVNGVSTHTLFDTGAERSFVSTRFANKARLSPIDGV-P 205
            R+Y +T + E E +P+V++    V     + L D GA  SFV+   ANK  + P     P
Sbjct: 453  RLYAITSRHEQENSPNVVTAMIKVFAFYVYALLDPGASLSFVTPYVANKFDVLPERLCEP 512

Query: 206  TLVTLPNGQGIPCPRSFENVTLKIAGVDFTFNLIQFDLMEFDVILGMDWLSKHRARFDCR 385
              V+ P G+ I   R + +  + I       +LI+ D+++FDVILGMDWL    A  DCR
Sbjct: 513  FCVSTPVGESILAERVYRDCPVSINHKSTMVDLIELDMVDFDVILGMDWLHACYASIDCR 572

Query: 386  KQKVSIVSSTGRRVSYKGTVSKPGTKWIYAPKLRKLSKKGHLVYLCCVKDLTLE-EKLND 562
             + V     +   + +  + + P  ++I   K RKL  KG + +L  V D ++E      
Sbjct: 573  TRVVKFQFPSEPILEWSSSSAVPKGRFISYLKARKLVSKGCIYHLARVNDSSVEIPYFQS 632

Query: 563  IPVVREFLDVFPEDLPRLPPQRDVEFGIDLVLGTGSISKTTYRMAPAXXXXXXXXXXXXG 742
            +P+VREF +VFP+DLP +PP+R+++FGIDL+  T  IS   YRMAPA            G
Sbjct: 633  VPIVREFPEVFPDDLPGIPPEREIDFGIDLIPDTRPISIPPYRMAPAELKELKDLLEK-G 691

Query: 743  FIRPSVFPWGAPVLFVRKKDESLRLCIDYRELNKVTIKNKYPLPRIEDLFDQLKGASVFS 922
            FIRPSV PWGAPVLFVRKKD SLR+CIDYR+LNKVTIKNKYPLPRI+DLFDQL+GA+ FS
Sbjct: 692  FIRPSVSPWGAPVLFVRKKDGSLRICIDYRQLNKVTIKNKYPLPRIDDLFDQLQGATCFS 751

Query: 923  KIDLRSGYHQLPVKPEDIHKTAFRTRYGHYEFVVMPFGLTNAPAVFIDQMNRTFHEYLDK 1102
            KIDLRSGYHQL V+  DI KTAFRTRYGHYEF+VM FGLTNAPA F+D MNR F  YLD 
Sbjct: 752  KIDLRSGYHQLRVRERDIPKTAFRTRYGHYEFLVMSFGLTNAPAAFMDLMNRVFRPYLDM 811

Query: 1103 CVVVFIDDILVYSKNEADHKHHLRQILMVLRKQKWYVKLSKCEFWLKEVAFLGHVISKEG 1282
             V++FIDDIL+YS+NE DH  HLR +L  L+ ++ Y K SKCEFWLK VAFLGH++S +G
Sbjct: 812  FVIIFIDDILIYSRNEEDHASHLRTVLQTLKDKELYAKFSKCEFWLKSVAFLGHIVSGDG 871

Query: 1283 IQVDPAKVKAILEWVRTTS 1339
            I+VD  K++A+  W R TS
Sbjct: 872  IKVDTRKIEAVQNWPRPTS 890


>gb|AAT38744.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1515

 Score =  433 bits (1114), Expect = e-119
 Identities = 228/439 (51%), Positives = 292/439 (66%), Gaps = 3/439 (0%)
 Frame = +2

Query: 32   RIYVMTQQ-EAEANPSVISGTFTVNGVSTHTLFDTGAERSFVSTRFANKARLSPIDGV-P 205
            R+Y +T + E E +P+V++    V     + L D GA  SFV+   ANK  + P     P
Sbjct: 447  RLYAITSRHEQENSPNVVTAMIKVFAFYVYALLDPGASLSFVTPYVANKFDVLPERLCEP 506

Query: 206  TLVTLPNGQGIPCPRSFENVTLKIAGVDFTFNLIQFDLMEFDVILGMDWLSKHRARFDCR 385
              V+ P G+ I   R + +  + I       +LI+ D+++FDVILGMDWL    A  DCR
Sbjct: 507  FCVSTPVGESILAERVYRDCPVSINHKSTMVDLIELDMVDFDVILGMDWLHACYASIDCR 566

Query: 386  KQKVSIVSSTGRRVSYKGTVSKPGTKWIYAPKLRKLSKKGHLVYLCCVKDLTLE-EKLND 562
             + V     +   + +  + + P  ++I   K RKL  KG + +L  V D ++E      
Sbjct: 567  TRVVKFQFPSEPILEWSSSSAVPKGRFISYLKARKLVSKGCIYHLARVNDSSVEIPYFQS 626

Query: 563  IPVVREFLDVFPEDLPRLPPQRDVEFGIDLVLGTGSISKTTYRMAPAXXXXXXXXXXXXG 742
            +P+VREF +VFP DLP +PP+R+++FGIDL+  T  IS   YRMAPA            G
Sbjct: 627  VPIVREFPEVFPNDLPGIPPEREIDFGIDLIPDTRPISIPPYRMAPAELKELKDLLEK-G 685

Query: 743  FIRPSVFPWGAPVLFVRKKDESLRLCIDYRELNKVTIKNKYPLPRIEDLFDQLKGASVFS 922
            FIRPSV PWGAPVLFVRKKD SLR+CIDYR+LNKVTIKNKYPLPRI+DLFDQL+GA+ FS
Sbjct: 686  FIRPSVSPWGAPVLFVRKKDGSLRMCIDYRQLNKVTIKNKYPLPRIDDLFDQLQGATCFS 745

Query: 923  KIDLRSGYHQLPVKPEDIHKTAFRTRYGHYEFVVMPFGLTNAPAVFIDQMNRTFHEYLDK 1102
            KIDLRSGYHQL V+  DI KTAFRTRYGHYEF+VM FGLTNAPA F+D MNR F  YLD 
Sbjct: 746  KIDLRSGYHQLRVRERDIPKTAFRTRYGHYEFLVMSFGLTNAPAAFMDLMNRVFRPYLDM 805

Query: 1103 CVVVFIDDILVYSKNEADHKHHLRQILMVLRKQKWYVKLSKCEFWLKEVAFLGHVISKEG 1282
             V++FIDDIL+YS+NE DH  HLR +L  L+ ++ Y K SKCEFWLK VAFLGH++S +G
Sbjct: 806  FVIIFIDDILIYSRNEEDHASHLRTVLQTLKDKELYAKFSKCEFWLKSVAFLGHIVSGDG 865

Query: 1283 IQVDPAKVKAILEWVRTTS 1339
            I+VD  K++A+  W R TS
Sbjct: 866  IKVDTRKIEAVQNWPRPTS 884


>gb|ABB46921.2| retrotransposon protein, putative, Ty3-gypsy subclass, expressed
            [Oryza sativa Japonica Group]
          Length = 1068

 Score =  425 bits (1092), Expect = e-116
 Identities = 229/442 (51%), Positives = 286/442 (64%), Gaps = 4/442 (0%)
 Frame = +2

Query: 29   ARIYVMTQQEAEANPSVISGTFTVNGVSTHTLFDTGAERSFVSTRFANKARLSPID-GVP 205
            AR+  +   EA+  P V+ GTF VN +    LFD+GA  SF+S  FA K  +  +  G P
Sbjct: 581  ARVNHVAAAEAQNAPDVVLGTFPVNSIPATVLFDSGATHSFLSKSFATKHGMEVVSLGRP 640

Query: 206  TLVTLPNGQGIPCPRSFENVTLKIAGVDFTFNLIQFDLMEFDVILGMDWLSKHRARFDCR 385
             LV  P  Q +   R   +VT++I GV F  +LI  +  + DVILGMDWLS+HR   DC 
Sbjct: 641  LLVNTPGNQ-VFSTRYCPSVTIEIEGVPFPSSLILLESKDLDVILGMDWLSRHRGVIDCA 699

Query: 386  KQKVSIVSSTGRRVSYKGTVSKPGTKWIYAPKLRKLSKKGHLVYLCCVKDLTLEEKLNDI 565
             +KV++ +S G  VS+  +                 S K H V L  V        L +I
Sbjct: 700  NRKVTLTNSNGETVSFFAS-----------------SPKSHGVVLNQVA-------LQEI 735

Query: 566  PVVREFLDVFPEDLPRLPPQRDVEFGIDLVLGTGSISKTTYRMAP---AXXXXXXXXXXX 736
            P+V+++ DVFPEDLP +PP+RD+EF IDLV GT  I K  YRMA    A           
Sbjct: 736  PIVQDYPDVFPEDLPGMPPKRDIEFRIDLVPGTNPIHKRPYRMAANELAEVKKQVDDLLQ 795

Query: 737  XGFIRPSVFPWGAPVLFVRKKDESLRLCIDYRELNKVTIKNKYPLPRIEDLFDQLKGASV 916
             G+IRPS  PWGAPV+FV KKD + R+C+DYR LN+VTIKNKYPLPRI+DLFDQLKGA+V
Sbjct: 796  KGYIRPSTSPWGAPVIFVEKKDHTQRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGATV 855

Query: 917  FSKIDLRSGYHQLPVKPEDIHKTAFRTRYGHYEFVVMPFGLTNAPAVFIDQMNRTFHEYL 1096
            FSKIDLRSGYHQL ++ EDI KTAF TRYG +E  VM FGLTNAPA F++ MN+ F EYL
Sbjct: 856  FSKIDLRSGYHQLRIREEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYL 915

Query: 1097 DKCVVVFIDDILVYSKNEADHKHHLRQILMVLRKQKWYVKLSKCEFWLKEVAFLGHVISK 1276
            DK VVVFIDDIL+YSK + +HK HLR  L  LR+ + Y K SKCEFWL EV FLGHVIS 
Sbjct: 916  DKFVVVFIDDILIYSKTKEEHKEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISS 975

Query: 1277 EGIQVDPAKVKAILEWVRTTSV 1342
             G+ VDP+ V+++L W +  +V
Sbjct: 976  GGVAVDPSNVESVLSWKQPKTV 997


>gb|AAM01169.1|AC113336_21 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1449

 Score =  425 bits (1092), Expect = e-116
 Identities = 229/442 (51%), Positives = 286/442 (64%), Gaps = 4/442 (0%)
 Frame = +2

Query: 29   ARIYVMTQQEAEANPSVISGTFTVNGVSTHTLFDTGAERSFVSTRFANKARLSPID-GVP 205
            AR+  +   EA+  P V+ GTF VN +    LFD+GA  SF+S  FA K  +  +  G P
Sbjct: 323  ARVNHVAAAEAQNAPDVVLGTFPVNSIPATVLFDSGATHSFLSKSFATKHGMEVVSLGRP 382

Query: 206  TLVTLPNGQGIPCPRSFENVTLKIAGVDFTFNLIQFDLMEFDVILGMDWLSKHRARFDCR 385
             LV  P  Q +   R   +VT++I GV F  +LI  +  + DVILGMDWLS+HR   DC 
Sbjct: 383  LLVNTPGNQ-VFSTRYCPSVTIEIEGVPFPSSLILLESKDLDVILGMDWLSRHRGVIDCA 441

Query: 386  KQKVSIVSSTGRRVSYKGTVSKPGTKWIYAPKLRKLSKKGHLVYLCCVKDLTLEEKLNDI 565
             +KV++ +S G  VS+  +                 S K H V L  V        L +I
Sbjct: 442  NRKVTLTNSNGETVSFFAS-----------------SPKSHGVVLNQVA-------LQEI 477

Query: 566  PVVREFLDVFPEDLPRLPPQRDVEFGIDLVLGTGSISKTTYRMAP---AXXXXXXXXXXX 736
            P+V+++ DVFPEDLP +PP+RD+EF IDLV GT  I K  YRMA    A           
Sbjct: 478  PIVQDYPDVFPEDLPGMPPKRDIEFRIDLVPGTNPIHKRPYRMAANELAEVKKQVDDLLQ 537

Query: 737  XGFIRPSVFPWGAPVLFVRKKDESLRLCIDYRELNKVTIKNKYPLPRIEDLFDQLKGASV 916
             G+IRPS  PWGAPV+FV KKD + R+C+DYR LN+VTIKNKYPLPRI+DLFDQLKGA+V
Sbjct: 538  KGYIRPSTSPWGAPVIFVEKKDHTQRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGATV 597

Query: 917  FSKIDLRSGYHQLPVKPEDIHKTAFRTRYGHYEFVVMPFGLTNAPAVFIDQMNRTFHEYL 1096
            FSKIDLRSGYHQL ++ EDI KTAF TRYG +E  VM FGLTNAPA F++ MN+ F EYL
Sbjct: 598  FSKIDLRSGYHQLRIREEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYL 657

Query: 1097 DKCVVVFIDDILVYSKNEADHKHHLRQILMVLRKQKWYVKLSKCEFWLKEVAFLGHVISK 1276
            DK VVVFIDDIL+YSK + +HK HLR  L  LR+ + Y K SKCEFWL EV FLGHVIS 
Sbjct: 658  DKFVVVFIDDILIYSKTKEEHKEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISS 717

Query: 1277 EGIQVDPAKVKAILEWVRTTSV 1342
             G+ VDP+ V+++L W +  +V
Sbjct: 718  GGVAVDPSNVESVLSWKQPKTV 739


>ref|XP_004488407.1| PREDICTED: uncharacterized protein LOC101502180 [Cicer arietinum]
          Length = 1235

 Score =  423 bits (1088), Expect = e-116
 Identities = 224/452 (49%), Positives = 292/452 (64%), Gaps = 5/452 (1%)
 Frame = +2

Query: 2    QKPIQTNQSARIYVMTQQEAEANPSVISGTFTVNGVSTHTLFDTGAERSFVSTRFANK-A 178
            Q P +  Q A+++ +T+Q+A+   +V++G  ++     H LFD GA  SFVS+ FA +  
Sbjct: 536  QIPAERGQ-AQVFALTRQDAQTCNAVVTGILSICSRDAHVLFDLGATHSFVSSWFATRLG 594

Query: 179  RLSPIDGVPTLVTLPNGQGIPCPRSFENVTLKIAGVDFTFNLIQFDLMEFDVILGMDWLS 358
            + S     P +V  P G  +     +    + I G  F+ +L+  DL++FDVILGMDWL+
Sbjct: 595  KCSSSLEEPLVVATPVGGNLLAKSVYRCCDITIDGKVFSVDLVVIDLIDFDVILGMDWLA 654

Query: 359  KHRARFDCRKQKVSIVSSTGRRVSYKGTVSKPGTKWIYAPKLRKLSKKGHLVYLCCVKDL 538
             H A  DC  + V          S++G         I A    KL ++G   Y+  V+D 
Sbjct: 655  FHHATLDCHDKVVKFEIPGQSVFSFQGERCWVPHNQILALAASKLMRRGCQAYIALVRDT 714

Query: 539  TL-EEKLNDIPVVREFLDVFPEDLPRLPPQRDVEFGIDLVLGTGSISKTTYRMAPAXXXX 715
             + EEKL  IP+  EF DVFPE+LP LPP R++EF IDLV  T  IS   YRMAPA    
Sbjct: 715  QVAEEKLEKIPIACEFPDVFPEELPGLPPDREIEFSIDLVPNTHPISIPPYRMAPAKLKE 774

Query: 716  XXXXXXXX---GFIRPSVFPWGAPVLFVRKKDESLRLCIDYRELNKVTIKNKYPLPRIED 886
                       GFIRPS  PWGAPVLFV+KKD S+RLC+DY++LNKV +KNKYP PRI++
Sbjct: 775  LREQLQDLLDKGFIRPSSSPWGAPVLFVKKKDGSMRLCVDYQQLNKVIVKNKYPSPRIDE 834

Query: 887  LFDQLKGASVFSKIDLRSGYHQLPVKPEDIHKTAFRTRYGHYEFVVMPFGLTNAPAVFID 1066
            LFDQL+GA  F KIDLRSGYHQL +K +DI KTAFRTRYGHYEF+VM FGLTN PA F+ 
Sbjct: 835  LFDQLQGAQCFPKIDLRSGYHQLKIKRDDITKTAFRTRYGHYEFLVMSFGLTNVPAAFMG 894

Query: 1067 QMNRTFHEYLDKCVVVFIDDILVYSKNEADHKHHLRQILMVLRKQKWYVKLSKCEFWLKE 1246
             MNR F  +LD+ V+VFIDDILVYSK++ +H+ HL  +L  LR ++ YVK  KC+FWL  
Sbjct: 895  LMNRVFKPFLDQFVIVFIDDILVYSKSKEEHERHLMLVLQTLRDKQLYVKFLKCQFWLDS 954

Query: 1247 VAFLGHVISKEGIQVDPAKVKAILEWVRTTSV 1342
            +AFLGHV+SK GI VDP+KV+A+  W R T+V
Sbjct: 955  LAFLGHVVSKNGISVDPSKVEAVQSWPRPTTV 986


>emb|CAH66289.1| OSIGBa0161P06.6 [Oryza sativa Indica Group]
          Length = 1433

 Score =  422 bits (1084), Expect = e-115
 Identities = 228/445 (51%), Positives = 287/445 (64%), Gaps = 7/445 (1%)
 Frame = +2

Query: 29   ARIYVMTQQEAEANPSVISGTFTVNGVSTHTLFDTGAERSFVSTRFANKARLSPID-GVP 205
            AR+  +   EA+  P V+ GTF VN +    LFD+GA  SF+S  FA+K  +  +  G P
Sbjct: 355  ARVNHVAAAEAQNAPDVVLGTFPVNSIPATVLFDSGATHSFLSKSFASKHGMEVVSLGRP 414

Query: 206  TLVTLPNGQGIP---CPRSFENVTLKIAGVDFTFNLIQFDLMEFDVILGMDWLSKHRARF 376
             LV  P  Q      CP    +VT++I  V F  +LI  +  + DVILGMDWLS+HR   
Sbjct: 415  LLVNSPGNQAFSTQYCP----SVTIEIEEVPFPSSLILLESKDLDVILGMDWLSRHRGVI 470

Query: 377  DCRKQKVSIVSSTGRRVSYKGTVSKPGTKWIYAPKLRKLSKKGHLVYLCCVKDLTLEEKL 556
            DC  +KV++ +S G  VS+  +                 S K H V L  V        L
Sbjct: 471  DCANRKVTLTNSNGETVSFFAS-----------------SPKSHGVVLNQVA-------L 506

Query: 557  NDIPVVREFLDVFPEDLPRLPPQRDVEFGIDLVLGTGSISKTTYRMAP---AXXXXXXXX 727
             +IP+V+++ DVFPEDLP +PP+RD+EF IDLV GT  I K  YRMA    A        
Sbjct: 507  QEIPIVQDYPDVFPEDLPGMPPKRDIEFRIDLVPGTNPIHKRPYRMAANELAEVKKQVDD 566

Query: 728  XXXXGFIRPSVFPWGAPVLFVRKKDESLRLCIDYRELNKVTIKNKYPLPRIEDLFDQLKG 907
                G+IRPS  PWGAPV+FV KKD + R+C+DYR LN+VTIKNKYPLPRI+DLFDQLKG
Sbjct: 567  LLQKGYIRPSTSPWGAPVIFVEKKDHTQRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKG 626

Query: 908  ASVFSKIDLRSGYHQLPVKPEDIHKTAFRTRYGHYEFVVMPFGLTNAPAVFIDQMNRTFH 1087
            A+VFSKIDLRSGYHQL ++ EDI KTAF TRYG +E +VM FGLTNAPA F++ MN+ F 
Sbjct: 627  ATVFSKIDLRSGYHQLRIREEDIPKTAFTTRYGLFECIVMSFGLTNAPAFFMNLMNKVFM 686

Query: 1088 EYLDKCVVVFIDDILVYSKNEADHKHHLRQILMVLRKQKWYVKLSKCEFWLKEVAFLGHV 1267
            EYLDK VVVFIDDIL+YSK + +H+ HLR  L  LR+ + Y K SKCEFWL EV FLGHV
Sbjct: 687  EYLDKFVVVFIDDILIYSKTKEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHV 746

Query: 1268 ISKEGIQVDPAKVKAILEWVRTTSV 1342
            IS  G+ VDP+ V+++L W +  +V
Sbjct: 747  ISSGGVAVDPSNVESVLSWKQPKTV 771


>emb|CAH66284.1| OSIGBa0161P06.1 [Oryza sativa Indica Group]
          Length = 1665

 Score =  421 bits (1083), Expect = e-115
 Identities = 229/445 (51%), Positives = 287/445 (64%), Gaps = 7/445 (1%)
 Frame = +2

Query: 29   ARIYVMTQQEAEANPSVISGTFTVNGVSTHTLFDTGAERSFVSTRFANKARLSPID-GVP 205
            AR+  +   EA+  P V+ GTF VN +    LFD+GA  SF+S  FA+K  +  +  G P
Sbjct: 539  ARVNHVAAAEAQNAPDVVLGTFPVNSIPATVLFDSGATHSFLSKSFASKHGMEVVSLGRP 598

Query: 206  TLVTLPNGQGIP---CPRSFENVTLKIAGVDFTFNLIQFDLMEFDVILGMDWLSKHRARF 376
             LV  P  Q      CP    +VT++I  V F  +LI  +  + DVILGMDWLS+HR   
Sbjct: 599  LLVNTPGNQVFSTQYCP----SVTIEIEEVPFPSSLILLESKDLDVILGMDWLSRHRGVI 654

Query: 377  DCRKQKVSIVSSTGRRVSYKGTVSKPGTKWIYAPKLRKLSKKGHLVYLCCVKDLTLEEKL 556
            DC  +KV++ SS+G  VS+  +                 S K H V L  V        L
Sbjct: 655  DCANRKVTLTSSSGETVSFFAS-----------------SPKSHGVVLNQVA-------L 690

Query: 557  NDIPVVREFLDVFPEDLPRLPPQRDVEFGIDLVLGTGSISKTTYRMAP---AXXXXXXXX 727
             +IP+V+++ DVFPEDLP +PP+RD+EF IDLV GT  I K  YRMA    A        
Sbjct: 691  QEIPIVQDYPDVFPEDLPGMPPKRDIEFRIDLVPGTNPIHKRPYRMAANELAEVKKQVDD 750

Query: 728  XXXXGFIRPSVFPWGAPVLFVRKKDESLRLCIDYRELNKVTIKNKYPLPRIEDLFDQLKG 907
                G+IRPS  PWGAPV+FV KKD + R+C+DYR LN+VTIKNKYPLPRI+DLFDQLKG
Sbjct: 751  LLQKGYIRPSTSPWGAPVIFVEKKDHTQRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKG 810

Query: 908  ASVFSKIDLRSGYHQLPVKPEDIHKTAFRTRYGHYEFVVMPFGLTNAPAVFIDQMNRTFH 1087
            A+VFSKIDLRSGYHQL ++ EDI KTAF TRYG +E  VM FGLTNAPA F++ MN+ F 
Sbjct: 811  ATVFSKIDLRSGYHQLRIREEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFM 870

Query: 1088 EYLDKCVVVFIDDILVYSKNEADHKHHLRQILMVLRKQKWYVKLSKCEFWLKEVAFLGHV 1267
            EYLDK VVVFIDDIL+YSK + +H+ HLR  L  LR+ + Y K SKCEFWL EV FLGHV
Sbjct: 871  EYLDKFVVVFIDDILIYSKTKEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHV 930

Query: 1268 ISKEGIQVDPAKVKAILEWVRTTSV 1342
            IS  G+ VDP+ V+++L W +  +V
Sbjct: 931  ISSGGVAVDPSNVESVLSWKQPKTV 955


>gb|AAL31078.1|AC091749_7 putative polyprotein [Oryza sativa Japonica Group]
          Length = 1524

 Score =  421 bits (1082), Expect = e-115
 Identities = 223/443 (50%), Positives = 296/443 (66%), Gaps = 5/443 (1%)
 Frame = +2

Query: 29   ARIYVMTQQEAEANPSVISGTFTVNGVSTHTLFDTGAERSFVSTRFANKARLSPID-GVP 205
            AR+   + +EA++ P VI GTF VN      LFD+GA  SF+S RFA    LS +   +P
Sbjct: 384  ARVNHASAEEAQSAPEVILGTFPVNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIP 443

Query: 206  TLVTLPNGQGIPCPRSFENVTLKIAGVDFTFNLIQFDLMEFDVILGMDWLSKHRARFDCR 385
              V  P G G+       +VT++I G+ F  NLI  +  + DVILGMDWL++HR   DC 
Sbjct: 444  MRVHTPGG-GMTTTHYCPSVTVEIQGLIFPANLILLESKDLDVILGMDWLTRHRGVIDCA 502

Query: 386  KQKVSIVSSTGRRVSYKGTV-SKPGTKWIYAPKLRKLSKKGHLVYLCCVKDLTLEEKLND 562
             + + + ++ G  V ++  V  KPG        L + + +G  V    V+  T  +KL D
Sbjct: 503  SRTIKLTNAKGEVVIFQSPVPQKPGIS------LNQAAGEGQEV---AVEKTT--KKLED 551

Query: 563  IPVVREFLDVFPEDLPRLPPQRDVEFGIDLVLGTGSISKTTYRMAP---AXXXXXXXXXX 733
            IP+VRE+ +VFP+DL  +PP+RD+EF IDLV GT SI K  YRM     A          
Sbjct: 552  IPIVREYPEVFPDDLTTMPPKRDIEFRIDLVPGTASIHKRPYRMGASELAEVKKQVDEQL 611

Query: 734  XXGFIRPSVFPWGAPVLFVRKKDESLRLCIDYRELNKVTIKNKYPLPRIEDLFDQLKGAS 913
              G+IRPS  PWGAP++FV KKD++ R+C+DYR LN+VTIKNKYPLPRI+DLFDQLKGA+
Sbjct: 612  QKGYIRPSTSPWGAPIIFVEKKDKTKRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGAT 671

Query: 914  VFSKIDLRSGYHQLPVKPEDIHKTAFRTRYGHYEFVVMPFGLTNAPAVFIDQMNRTFHEY 1093
            VFSKIDLRSGYHQL ++ EDI KTAF TRYG +E  VM FGLTNAPA F++ MN+ F E+
Sbjct: 672  VFSKIDLRSGYHQLRIREEDIPKTAFITRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEF 731

Query: 1094 LDKCVVVFIDDILVYSKNEADHKHHLRQILMVLRKQKWYVKLSKCEFWLKEVAFLGHVIS 1273
            LDK VVVFIDDIL+YSK+E +H+ HLR +L  L++ + Y K SKC+FWLKEV FLGH+++
Sbjct: 732  LDKFVVVFIDDILIYSKSEEEHEQHLRLVLEKLKEHQLYAKFSKCDFWLKEVQFLGHIVN 791

Query: 1274 KEGIQVDPAKVKAILEWVRTTSV 1342
             +G+ VDPA V+++ +W    +V
Sbjct: 792  AQGVAVDPANVESVTKWTPPRTV 814


>gb|AAP53008.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1595

 Score =  421 bits (1082), Expect = e-115
 Identities = 223/443 (50%), Positives = 296/443 (66%), Gaps = 5/443 (1%)
 Frame = +2

Query: 29   ARIYVMTQQEAEANPSVISGTFTVNGVSTHTLFDTGAERSFVSTRFANKARLSPID-GVP 205
            AR+   + +EA++ P VI GTF VN      LFD+GA  SF+S RFA    LS +   +P
Sbjct: 455  ARVNHASAEEAQSAPEVILGTFPVNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIP 514

Query: 206  TLVTLPNGQGIPCPRSFENVTLKIAGVDFTFNLIQFDLMEFDVILGMDWLSKHRARFDCR 385
              V  P G G+       +VT++I G+ F  NLI  +  + DVILGMDWL++HR   DC 
Sbjct: 515  MRVHTPGG-GMTTTHYCPSVTVEIQGLIFPANLILLESKDLDVILGMDWLTRHRGVIDCA 573

Query: 386  KQKVSIVSSTGRRVSYKGTV-SKPGTKWIYAPKLRKLSKKGHLVYLCCVKDLTLEEKLND 562
             + + + ++ G  V ++  V  KPG        L + + +G  V    V+  T  +KL D
Sbjct: 574  SRTIKLTNAKGEVVIFQSPVPQKPGIS------LNQAAGEGQEV---AVEKTT--KKLED 622

Query: 563  IPVVREFLDVFPEDLPRLPPQRDVEFGIDLVLGTGSISKTTYRMAP---AXXXXXXXXXX 733
            IP+VRE+ +VFP+DL  +PP+RD+EF IDLV GT SI K  YRM     A          
Sbjct: 623  IPIVREYPEVFPDDLTTMPPKRDIEFRIDLVPGTASIHKRPYRMGASELAEVKKQVDEQL 682

Query: 734  XXGFIRPSVFPWGAPVLFVRKKDESLRLCIDYRELNKVTIKNKYPLPRIEDLFDQLKGAS 913
              G+IRPS  PWGAP++FV KKD++ R+C+DYR LN+VTIKNKYPLPRI+DLFDQLKGA+
Sbjct: 683  QKGYIRPSTSPWGAPIIFVEKKDKTKRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGAT 742

Query: 914  VFSKIDLRSGYHQLPVKPEDIHKTAFRTRYGHYEFVVMPFGLTNAPAVFIDQMNRTFHEY 1093
            VFSKIDLRSGYHQL ++ EDI KTAF TRYG +E  VM FGLTNAPA F++ MN+ F E+
Sbjct: 743  VFSKIDLRSGYHQLRIREEDIPKTAFITRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEF 802

Query: 1094 LDKCVVVFIDDILVYSKNEADHKHHLRQILMVLRKQKWYVKLSKCEFWLKEVAFLGHVIS 1273
            LDK VVVFIDDIL+YSK+E +H+ HLR +L  L++ + Y K SKC+FWLKEV FLGH+++
Sbjct: 803  LDKFVVVFIDDILIYSKSEEEHEQHLRLVLEKLKEHQLYAKFSKCDFWLKEVQFLGHIVN 862

Query: 1274 KEGIQVDPAKVKAILEWVRTTSV 1342
             +G+ VDPA V+++ +W    +V
Sbjct: 863  AQGVAVDPANVESVTKWTPPRTV 885


>gb|AAT39297.2| Gag-pol protein, putative [Solanum demissum]
          Length = 1554

 Score =  421 bits (1081), Expect = e-115
 Identities = 226/442 (51%), Positives = 287/442 (64%), Gaps = 6/442 (1%)
 Frame = +2

Query: 32   RIYVMTQQ-EAEANPSVISGTFTVNGVSTHTLFDTGAERSFVSTRFANKARLSPIDGV-P 205
            R+Y +T + E E +P+V++    V     + L D G   SFV+   ANK  + P     P
Sbjct: 528  RLYAITSRHEPENSPNVVTRMIKVFAFDVYALLDPGVSLSFVTLYVANKFDVLPERLCEP 587

Query: 206  TLVTLPNGQGIPCPRSFENVTLKIAGVDFTFNLIQFDLMEFDVILGMDWLSKHRARFDCR 385
              V+ P G+ I   R + +    I       +L++ D+++FDVILGM+WL    A  DCR
Sbjct: 588  FCVSTPVGESILAERVYRDCPDSINHKSTMADLVELDMVDFDVILGMNWLHACYASLDCR 647

Query: 386  KQKVSIVSSTGRRVSYKGTVSKPGTKWIYAPKLRKLSKKGHLVYLCCVKDLTLE-EKLND 562
             + V           +  + + P  ++I   K RKL  KG + +L  V D ++E      
Sbjct: 648  TRVVKFQFPNEPVFEWSSSSAVPKGRFISYLKARKLVSKGCIYHLVRVHDSSVEIPHFQS 707

Query: 563  IPVVREFLDVFPEDLPRLPPQRDVEFGIDLVLGTGSISKTTYRMAPAXXXXXXXXXXXX- 739
            +P+VREF  VFP+DLP +PP+R+++FGIDL+  T  IS   YRMAP+             
Sbjct: 708  VPIVREFPKVFPDDLPGIPPEREIDFGIDLIPDTHPISIPPYRMAPSELKELKEQLKDLL 767

Query: 740  --GFIRPSVFPWGAPVLFVRKKDESLRLCIDYRELNKVTIKNKYPLPRIEDLFDQLKGAS 913
              GFIRPSV PWGAPVLFVRKKD SLR+CIDYR+LNKVTIKNKYPLPRI+DLF+QL+GA+
Sbjct: 768  DKGFIRPSVSPWGAPVLFVRKKDGSLRMCIDYRQLNKVTIKNKYPLPRIDDLFNQLQGAT 827

Query: 914  VFSKIDLRSGYHQLPVKPEDIHKTAFRTRYGHYEFVVMPFGLTNAPAVFIDQMNRTFHEY 1093
             FSKIDLRSGYHQL V+  DI KTAFRTRYGHYEF+VM FGLTNAPA F+D MNR F  Y
Sbjct: 828  CFSKIDLRSGYHQLRVRECDIPKTAFRTRYGHYEFLVMSFGLTNAPAAFMDLMNRVFKPY 887

Query: 1094 LDKCVVVFIDDILVYSKNEADHKHHLRQILMVLRKQKWYVKLSKCEFWLKEVAFLGHVIS 1273
            LD  V+VFIDDILVYS+NE DH  HLR +L  L+  K Y K SKCEFWLK VAFLGH++S
Sbjct: 888  LDTFVIVFIDDILVYSRNEEDHASHLRTVLQTLKDNKLYAKFSKCEFWLKSVAFLGHIVS 947

Query: 1274 KEGIQVDPAKVKAILEWVRTTS 1339
             +GI+VD  K++A+  W R TS
Sbjct: 948  GDGIKVDTGKIEAMQNWPRPTS 969


>gb|ABF95974.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1643

 Score =  421 bits (1081), Expect = e-115
 Identities = 229/445 (51%), Positives = 288/445 (64%), Gaps = 7/445 (1%)
 Frame = +2

Query: 29   ARIYVMTQQEAEANPSVISGTFTVNGVSTHTLFDTGAERSFVSTRFANKARLSPID-GVP 205
            AR+  +   EA+  P V+ GTF VN +    LFD+GA  SF+S  FA+K  +  +  G P
Sbjct: 607  ARVNHVAAAEAQNAPDVVLGTFPVNSIPATVLFDSGATHSFLSKSFASKHGMEVVSLGRP 666

Query: 206  TLVTLPNGQGIP---CPRSFENVTLKIAGVDFTFNLIQFDLMEFDVILGMDWLSKHRARF 376
             LV  P  Q      CP    +VT++I  V F  +LI  +  + DVILGMDWLS+HR   
Sbjct: 667  LLVNTPGNQVFSTQYCP----SVTIEIEEVPFPSSLILLESKDLDVILGMDWLSRHRGVI 722

Query: 377  DCRKQKVSIVSSTGRRVSYKGTVSKPGTKWIYAPKLRKLSKKGHLVYLCCVKDLTLEEKL 556
            DC  +KV++ +S G  VS+  +                 S K H V L     +TL+E  
Sbjct: 723  DCANRKVTVTNSNGEIVSFFAS-----------------SPKSHGVVL---NQVTLQE-- 760

Query: 557  NDIPVVREFLDVFPEDLPRLPPQRDVEFGIDLVLGTGSISKTTYRMAP---AXXXXXXXX 727
              IP+V+++ DVFPEDLP +PP+RD+EF IDLV GT  I K  YRMA    A        
Sbjct: 761  --IPIVQDYPDVFPEDLPGMPPKRDIEFRIDLVPGTNPIHKRPYRMAANELAEVKKQVDD 818

Query: 728  XXXXGFIRPSVFPWGAPVLFVRKKDESLRLCIDYRELNKVTIKNKYPLPRIEDLFDQLKG 907
                G+IRPS  PWGAPV+FV KKD + R+C+DYR LN+VTIKNKYPLPRI+DLFDQLKG
Sbjct: 819  LLQKGYIRPSTSPWGAPVIFVEKKDHTQRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKG 878

Query: 908  ASVFSKIDLRSGYHQLPVKPEDIHKTAFRTRYGHYEFVVMPFGLTNAPAVFIDQMNRTFH 1087
            A+VFSKIDLRSGYHQL ++ EDI KTAF TRYG +E  VM FGLTNAPA F++ MN+ F 
Sbjct: 879  ATVFSKIDLRSGYHQLRIREEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFM 938

Query: 1088 EYLDKCVVVFIDDILVYSKNEADHKHHLRQILMVLRKQKWYVKLSKCEFWLKEVAFLGHV 1267
            EYLDK VVVFIDDIL+YSK + +H+ HLR  L  LR+ + Y K SKCEFWL EV FLGHV
Sbjct: 939  EYLDKFVVVFIDDILIYSKTKEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHV 998

Query: 1268 ISKEGIQVDPAKVKAILEWVRTTSV 1342
            IS  G+ VDP+ V+++L W +  +V
Sbjct: 999  ISSGGVAVDPSNVESVLSWKQPKTV 1023