BLASTX nr result
ID: Achyranthes23_contig00028398
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Achyranthes23_contig00028398
(1517 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002285868.1| PREDICTED: replication factor C subunit 5 [V... 602 e-169
ref|XP_002520343.1| replication factor C / DNA polymerase III ga... 598 e-168
ref|XP_006472809.1| PREDICTED: replication factor C subunit 3-li... 593 e-167
ref|XP_006434237.1| hypothetical protein CICLE_v10001597mg [Citr... 592 e-166
ref|XP_002302226.1| replication factor C 36 kDA family protein [... 590 e-166
gb|EXB60106.1| Replication factor C subunit 5 [Morus notabilis] ... 588 e-165
ref|XP_003526636.1| PREDICTED: replication factor C subunit 3-li... 586 e-164
ref|XP_004502480.1| PREDICTED: replication factor C subunit 5-li... 580 e-163
ref|XP_004502481.1| PREDICTED: replication factor C subunit 5-li... 576 e-161
ref|XP_003523440.1| PREDICTED: replication factor C subunit 3-li... 576 e-161
ref|XP_004149801.1| PREDICTED: replication factor C subunit 5-li... 574 e-161
ref|XP_004242038.1| PREDICTED: replication factor C subunit 5-li... 571 e-160
ref|XP_006365532.1| PREDICTED: replication factor C subunit 3-li... 570 e-160
ref|XP_003602039.1| Replication factor C subunit [Medicago trunc... 570 e-160
ref|XP_006390087.1| hypothetical protein EUTSA_v10018756mg [Eutr... 562 e-157
ref|XP_004290888.1| PREDICTED: replication factor C subunit 5-li... 560 e-157
gb|EOY16353.1| Replication factor C / DNA polymerase III gamma-t... 558 e-156
gb|ESW09418.1| hypothetical protein PHAVU_009G126000g [Phaseolus... 556 e-155
ref|XP_006856708.1| hypothetical protein AMTR_s00054p00174840 [A... 550 e-154
ref|NP_001048280.1| Os02g0775200 [Oryza sativa Japonica Group] g... 548 e-153
>ref|XP_002285868.1| PREDICTED: replication factor C subunit 5 [Vitis vinifera]
gi|302141794|emb|CBI18997.3| unnamed protein product
[Vitis vinifera]
Length = 360
Score = 602 bits (1553), Expect = e-169
Identities = 308/362 (85%), Positives = 337/362 (93%), Gaps = 2/362 (0%)
Frame = -3
Query: 1422 MADTMSPMDVDNTTASNPTLNPNKGKNVVV--PGDGKSTLWVEKYRPQSLADVAAHRDII 1249
MA+ ++ MD+D N L NKGK+VVV P D K+T WVEKYRPQSLADVAAHRDI+
Sbjct: 1 MAEAVTVMDIDEE--DNHLLKANKGKSVVVGGPPDRKATPWVEKYRPQSLADVAAHRDIV 58
Query: 1248 DTIDRLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGNQFHNMILELNASDERGIDVVR 1069
DTIDRLTSEN+LPHLLLYGPPGTGKTSTILAVARKLYG QFHNMILELNASD+RGIDVVR
Sbjct: 59 DTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGEQFHNMILELNASDDRGIDVVR 118
Query: 1068 QQIQDFASTQSFSFGAKSHVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNNVN 889
QQIQDFASTQSFSFGAKS VKLVLLDEADAMTKDAQFALRRVIEKYTK+TRFALICN+VN
Sbjct: 119 QQIQDFASTQSFSFGAKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVN 178
Query: 888 KVISALQSRCTRFRFAPLDPIHVTERLKHVIEAEGLDVTESGLAALVRLSTGDMRKALNI 709
K+I ALQSRCTRFRFAPLD +HVTERLKHVI AE LDV+ESGLAALVRLS+GDMRKALNI
Sbjct: 179 KIIPALQSRCTRFRFAPLDAVHVTERLKHVINAEKLDVSESGLAALVRLSSGDMRKALNI 238
Query: 708 LQSTHMASQQITEEAVYLCTGNPLPKDIEQISHWLLNETFATSFSKISEMKTRKGLALVD 529
LQSTHMASQQITEEAVYLCTGNPLPKDIEQIS+WLLNE+FA SF +ISE+K RKGLALVD
Sbjct: 239 LQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNESFAASFDRISEVKMRKGLALVD 298
Query: 528 IIREVTMFVFRIRMPTDVRVQLLNDMADIEYRLSFGCSDKLQLGSLIASFTKARSALVAA 349
++REVTMFVF+I+MP+DVRVQL+ND+ADIEYRLSFGC+DKLQLGSLIASFT+AR+ALVAA
Sbjct: 299 VVREVTMFVFKIKMPSDVRVQLINDLADIEYRLSFGCNDKLQLGSLIASFTRARAALVAA 358
Query: 348 AK 343
AK
Sbjct: 359 AK 360
>ref|XP_002520343.1| replication factor C / DNA polymerase III gamma-tau subunit, putative
[Ricinus communis] gi|223540562|gb|EEF42129.1|
replication factor C / DNA polymerase III gamma-tau
subunit, putative [Ricinus communis]
Length = 360
Score = 598 bits (1542), Expect = e-168
Identities = 307/362 (84%), Positives = 334/362 (92%), Gaps = 2/362 (0%)
Frame = -3
Query: 1422 MADTMSPMDVDNTTAS--NPTLNPNKGKNVVVPGDGKSTLWVEKYRPQSLADVAAHRDII 1249
MAD ++ MD+D N PNKGKNV V D K+T WVEKYRPQSLADVAAHRDI+
Sbjct: 1 MADVVTIMDIDEDVKEKQNQLSKPNKGKNVFV--DTKATPWVEKYRPQSLADVAAHRDIV 58
Query: 1248 DTIDRLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGNQFHNMILELNASDERGIDVVR 1069
DTIDRLT+EN+LPHLLLYGPPGTGKTSTILAVARKLYG Q+HNMILELNASD+RGIDVVR
Sbjct: 59 DTIDRLTNENRLPHLLLYGPPGTGKTSTILAVARKLYGVQYHNMILELNASDDRGIDVVR 118
Query: 1068 QQIQDFASTQSFSFGAKSHVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNNVN 889
QQIQDFASTQSFSF AKS VKLVLLDEADAMTKDAQFALRRVIEKYTK+TRFALICN+VN
Sbjct: 119 QQIQDFASTQSFSFDAKSAVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVN 178
Query: 888 KVISALQSRCTRFRFAPLDPIHVTERLKHVIEAEGLDVTESGLAALVRLSTGDMRKALNI 709
K+I ALQSRCTRFRFAPLDPIHVT+RLKHVIEAEGLDV E GLAA+VRLS GDMRKALNI
Sbjct: 179 KIIPALQSRCTRFRFAPLDPIHVTDRLKHVIEAEGLDVPEPGLAAVVRLSNGDMRKALNI 238
Query: 708 LQSTHMASQQITEEAVYLCTGNPLPKDIEQISHWLLNETFATSFSKISEMKTRKGLALVD 529
LQSTHMASQQITEEAV+LCTGNPLPKDI+QIS+WLLNE+FA SF +ISE+KT+KGLALVD
Sbjct: 239 LQSTHMASQQITEEAVHLCTGNPLPKDIQQISYWLLNESFAESFKRISEIKTKKGLALVD 298
Query: 528 IIREVTMFVFRIRMPTDVRVQLLNDMADIEYRLSFGCSDKLQLGSLIASFTKARSALVAA 349
I+REVTMFVF+I+MP+DVRVQL+NDMADIEYRLSFGCSDKLQLGSL+ASFT ARSALVAA
Sbjct: 299 IVREVTMFVFKIKMPSDVRVQLINDMADIEYRLSFGCSDKLQLGSLVASFTWARSALVAA 358
Query: 348 AK 343
AK
Sbjct: 359 AK 360
>ref|XP_006472809.1| PREDICTED: replication factor C subunit 3-like [Citrus sinensis]
Length = 364
Score = 593 bits (1530), Expect = e-167
Identities = 303/363 (83%), Positives = 335/363 (92%), Gaps = 4/363 (1%)
Frame = -3
Query: 1419 ADTMSPMDVDNTTASNPTLNP-NKGKNVVVPG---DGKSTLWVEKYRPQSLADVAAHRDI 1252
A+T+S MD+D N L P + GKNV+V G D K++ WVEKYRPQSLADVAAHRDI
Sbjct: 4 AETVSLMDIDED--ENKNLKPKDNGKNVIVSGTPPDIKASPWVEKYRPQSLADVAAHRDI 61
Query: 1251 IDTIDRLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGNQFHNMILELNASDERGIDVV 1072
+DTIDRLTSEN+LPHLLLYGPPGTGKTSTILAVARKLYG Q+HNMILELNASD+RGIDVV
Sbjct: 62 VDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVV 121
Query: 1071 RQQIQDFASTQSFSFGAKSHVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNNV 892
RQQIQDFASTQSFSFG K+ VKLVLLDEADAMTKDAQFALRRVIEKYTK+TRFALICN V
Sbjct: 122 RQQIQDFASTQSFSFGVKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQV 181
Query: 891 NKVISALQSRCTRFRFAPLDPIHVTERLKHVIEAEGLDVTESGLAALVRLSTGDMRKALN 712
NK+I ALQSRCTRFRFAPL+P+HVTERLKHVIEAEGLDVTE GLAALVRL GDMRKALN
Sbjct: 182 NKIIPALQSRCTRFRFAPLEPVHVTERLKHVIEAEGLDVTEGGLAALVRLCNGDMRKALN 241
Query: 711 ILQSTHMASQQITEEAVYLCTGNPLPKDIEQISHWLLNETFATSFSKISEMKTRKGLALV 532
ILQSTHMASQQITEEAVYLCTGNPLPKDIEQIS+WLLNE+FA SF +ISEMK RKGLALV
Sbjct: 242 ILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNESFADSFKRISEMKMRKGLALV 301
Query: 531 DIIREVTMFVFRIRMPTDVRVQLLNDMADIEYRLSFGCSDKLQLGSLIASFTKARSALVA 352
DI+REVTMFVF+I+MP+DVRV+L+ND+ADIEYRLSFGC+DKLQLGS+I++FT+ARSA+VA
Sbjct: 302 DIVREVTMFVFKIKMPSDVRVRLMNDLADIEYRLSFGCNDKLQLGSIISTFTQARSAIVA 361
Query: 351 AAK 343
AAK
Sbjct: 362 AAK 364
>ref|XP_006434237.1| hypothetical protein CICLE_v10001597mg [Citrus clementina]
gi|557536359|gb|ESR47477.1| hypothetical protein
CICLE_v10001597mg [Citrus clementina]
Length = 364
Score = 592 bits (1526), Expect = e-166
Identities = 303/363 (83%), Positives = 334/363 (92%), Gaps = 4/363 (1%)
Frame = -3
Query: 1419 ADTMSPMDVDNTTASNPTLNP-NKGKNVVVPG---DGKSTLWVEKYRPQSLADVAAHRDI 1252
A+T+S MD D N L P + GKNV+V G D K++ WVEKYRPQSLADVAAHRDI
Sbjct: 4 AETVSLMDFDED--ENQNLKPKDNGKNVIVSGTPPDIKASPWVEKYRPQSLADVAAHRDI 61
Query: 1251 IDTIDRLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGNQFHNMILELNASDERGIDVV 1072
+DTIDRLTSEN+LPHLLLYGPPGTGKTSTILAVARKLYG Q+HNMILELNASD+RGIDVV
Sbjct: 62 VDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVV 121
Query: 1071 RQQIQDFASTQSFSFGAKSHVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNNV 892
RQQIQDFASTQSFSFG K+ VKLVLLDEADAMTKDAQFALRRVIEKYTK+TRFALICN V
Sbjct: 122 RQQIQDFASTQSFSFGVKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQV 181
Query: 891 NKVISALQSRCTRFRFAPLDPIHVTERLKHVIEAEGLDVTESGLAALVRLSTGDMRKALN 712
NK+I ALQSRCTRFRFAPL+P+HVTERLKHVIEAEGLDVTE GLAALVRL GDMRKALN
Sbjct: 182 NKIIPALQSRCTRFRFAPLEPVHVTERLKHVIEAEGLDVTEGGLAALVRLCNGDMRKALN 241
Query: 711 ILQSTHMASQQITEEAVYLCTGNPLPKDIEQISHWLLNETFATSFSKISEMKTRKGLALV 532
ILQSTHMASQQITEEAVYLCTGNPLPKDIEQIS+WLLNE+FA SF +ISEMK RKGLALV
Sbjct: 242 ILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNESFADSFKRISEMKMRKGLALV 301
Query: 531 DIIREVTMFVFRIRMPTDVRVQLLNDMADIEYRLSFGCSDKLQLGSLIASFTKARSALVA 352
DI+REVTMFVF+I+MP+DVRV+L+ND+ADIEYRLSFGC+DKLQLGS+I++FT+ARSA+VA
Sbjct: 302 DIVREVTMFVFKIKMPSDVRVRLMNDLADIEYRLSFGCNDKLQLGSIISTFTQARSAIVA 361
Query: 351 AAK 343
AAK
Sbjct: 362 AAK 364
>ref|XP_002302226.1| replication factor C 36 kDA family protein [Populus trichocarpa]
gi|222843952|gb|EEE81499.1| replication factor C 36 kDA
family protein [Populus trichocarpa]
Length = 363
Score = 590 bits (1521), Expect = e-166
Identities = 299/362 (82%), Positives = 330/362 (91%), Gaps = 3/362 (0%)
Frame = -3
Query: 1422 MADTMSPMDVDNTTASNPTLNPNKGKNVVVPGD---GKSTLWVEKYRPQSLADVAAHRDI 1252
MA+ ++ MD+D N PNKGK VVVP GK+T WVEKYRPQSLADVAAHRDI
Sbjct: 1 MAEAIALMDIDEEENQNHLSKPNKGKKVVVPATPPGGKATPWVEKYRPQSLADVAAHRDI 60
Query: 1251 IDTIDRLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGNQFHNMILELNASDERGIDVV 1072
IDTIDRLTSEN+LPHLLLYGPPGTGKTSTILAVARKLYG Q+HNMILELNASD+RGIDVV
Sbjct: 61 IDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVV 120
Query: 1071 RQQIQDFASTQSFSFGAKSHVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNNV 892
R+QIQDFASTQSFSFGAK+ VKLVLLDEADAMTKDAQFALRRVIEKYTK+TRFALICN+V
Sbjct: 121 RKQIQDFASTQSFSFGAKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHV 180
Query: 891 NKVISALQSRCTRFRFAPLDPIHVTERLKHVIEAEGLDVTESGLAALVRLSTGDMRKALN 712
NK+I ALQSRCTRFRFAPLDP+HV ERLKHVIEAEGLDV ESGL AL LS GDMRKALN
Sbjct: 181 NKIIPALQSRCTRFRFAPLDPMHVGERLKHVIEAEGLDVPESGLEALKCLSNGDMRKALN 240
Query: 711 ILQSTHMASQQITEEAVYLCTGNPLPKDIEQISHWLLNETFATSFSKISEMKTRKGLALV 532
ILQSTHMASQQITEE VYLCTGNPLP+D++QI+HWLLNE+FA S+ +ISE+KTRKGLALV
Sbjct: 241 ILQSTHMASQQITEETVYLCTGNPLPQDVQQITHWLLNESFAESYKRISEIKTRKGLALV 300
Query: 531 DIIREVTMFVFRIRMPTDVRVQLLNDMADIEYRLSFGCSDKLQLGSLIASFTKARSALVA 352
DI+REVTMFVF+I+M +D+RV L+ND+ADIEYRLSFGC+DKLQLGSLIASFT+ARSALVA
Sbjct: 301 DIVREVTMFVFKIKMQSDIRVPLINDLADIEYRLSFGCNDKLQLGSLIASFTRARSALVA 360
Query: 351 AA 346
AA
Sbjct: 361 AA 362
>gb|EXB60106.1| Replication factor C subunit 5 [Morus notabilis]
gi|587990838|gb|EXC75062.1| Replication factor C subunit
5 [Morus notabilis]
Length = 365
Score = 588 bits (1517), Expect = e-165
Identities = 301/365 (82%), Positives = 332/365 (90%), Gaps = 5/365 (1%)
Frame = -3
Query: 1422 MADTMSPMDVDNT-TASNPTLNP-NKGKNVVVPGDGKSTLWVEKYRPQSLADVAAHRDII 1249
M + +S MD+D+ A + + P NKGK+ P DGK+T WVEKYRPQSLADVAAHRDII
Sbjct: 1 MTEVVSLMDIDDDDNAGDRSAKPINKGKSGAAPSDGKATPWVEKYRPQSLADVAAHRDII 60
Query: 1248 DTIDRLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGNQFHNMILELNASDERGIDVVR 1069
DTIDRLTSEN+LPHLLLYGPPGTGKTSTILAVARKLYG Q+HNMILELNASD+RGIDVVR
Sbjct: 61 DTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVR 120
Query: 1068 QQIQDFASTQSFSFGAKSHVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNNVN 889
QQIQDFASTQSFSFG K+ VKLVLLDEADAMTKDAQFALRRVIEKYTK+TRF+LICNNVN
Sbjct: 121 QQIQDFASTQSFSFGVKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFSLICNNVN 180
Query: 888 KVISALQSRCTRFRFAPLDPIHVTERLKHVIEAEG---LDVTESGLAALVRLSTGDMRKA 718
K+I ALQSRCTRFRFAPLDP+HV ERLKHVIEAEG LDV+ESGL A VRLS GDMRKA
Sbjct: 181 KIIPALQSRCTRFRFAPLDPVHVNERLKHVIEAEGQVLLDVSESGLTAFVRLSNGDMRKA 240
Query: 717 LNILQSTHMASQQITEEAVYLCTGNPLPKDIEQISHWLLNETFATSFSKISEMKTRKGLA 538
LNILQSTHMAS++ITEE VYLCTGNPLPKDIEQIS+WLLNE+FA SF +IS MK RKGLA
Sbjct: 241 LNILQSTHMASKKITEEEVYLCTGNPLPKDIEQISYWLLNESFAESFKQISNMKGRKGLA 300
Query: 537 LVDIIREVTMFVFRIRMPTDVRVQLLNDMADIEYRLSFGCSDKLQLGSLIASFTKARSAL 358
LVDI+REVTMFVF+I+MP+D RVQL+ND+ADIEYRLSFGC+DKLQLGSLIASFTKAR++L
Sbjct: 301 LVDIVREVTMFVFKIKMPSDARVQLINDLADIEYRLSFGCNDKLQLGSLIASFTKARASL 360
Query: 357 VAAAK 343
VAAAK
Sbjct: 361 VAAAK 365
>ref|XP_003526636.1| PREDICTED: replication factor C subunit 3-like [Glycine max]
Length = 361
Score = 586 bits (1510), Expect = e-164
Identities = 300/363 (82%), Positives = 330/363 (90%), Gaps = 4/363 (1%)
Frame = -3
Query: 1422 MADTMSPMDVDNTTASNPTLNPNKGKNVVVPGD----GKSTLWVEKYRPQSLADVAAHRD 1255
MA T PMD+D+ T T +P+KGK+VV G+ GK+ WVEKYRPQSL DVAAHRD
Sbjct: 1 MAQTTHPMDIDDHTY---TASPDKGKSVVFAGNPPAAGKAIPWVEKYRPQSLDDVAAHRD 57
Query: 1254 IIDTIDRLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGNQFHNMILELNASDERGIDV 1075
I+DTIDRLT+EN+LPHLLLYGPPGTGKTSTILAVARKLYG+Q+ NMILELNASD+RGIDV
Sbjct: 58 IVDTIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGSQYQNMILELNASDDRGIDV 117
Query: 1074 VRQQIQDFASTQSFSFGAKSHVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNN 895
VRQQIQDFASTQS SFG KS VKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICN+
Sbjct: 118 VRQQIQDFASTQSLSFGVKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNH 177
Query: 894 VNKVISALQSRCTRFRFAPLDPIHVTERLKHVIEAEGLDVTESGLAALVRLSTGDMRKAL 715
VNK+I ALQSRCTRFRFAPLD +HVTERLKHVI+AEGLDV +SGLAA VRLS GDMRKAL
Sbjct: 178 VNKIIPALQSRCTRFRFAPLDAVHVTERLKHVIKAEGLDVEDSGLAAFVRLSNGDMRKAL 237
Query: 714 NILQSTHMASQQITEEAVYLCTGNPLPKDIEQISHWLLNETFATSFSKISEMKTRKGLAL 535
NILQSTHMASQQITEEAVYLCTGNPLPKDIE IS+WLLNE FA SF +I EMKTRKGLAL
Sbjct: 238 NILQSTHMASQQITEEAVYLCTGNPLPKDIELISYWLLNEQFADSFKRIDEMKTRKGLAL 297
Query: 534 VDIIREVTMFVFRIRMPTDVRVQLLNDMADIEYRLSFGCSDKLQLGSLIASFTKARSALV 355
+DI+REVTMFVF+I+MP+ VRVQL+ND+ADIEYRLSFGC+DKLQLGS+IASFT+ARSALV
Sbjct: 298 IDIVREVTMFVFKIKMPSAVRVQLMNDLADIEYRLSFGCNDKLQLGSVIASFTRARSALV 357
Query: 354 AAA 346
AAA
Sbjct: 358 AAA 360
>ref|XP_004502480.1| PREDICTED: replication factor C subunit 5-like isoform X1 [Cicer
arietinum]
Length = 363
Score = 580 bits (1496), Expect = e-163
Identities = 293/357 (82%), Positives = 327/357 (91%), Gaps = 4/357 (1%)
Frame = -3
Query: 1404 PMDVDNTTASNPTLNPNKGKNVVVPGD----GKSTLWVEKYRPQSLADVAAHRDIIDTID 1237
PMD+D T + + NP+KGK V+ + GKSTLWVEKYRPQSL DVAAHRDI+DTID
Sbjct: 8 PMDIDQTNSFSS--NPDKGKTVISAPNPSIGGKSTLWVEKYRPQSLDDVAAHRDIVDTID 65
Query: 1236 RLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGNQFHNMILELNASDERGIDVVRQQIQ 1057
RLT+EN+LPHLLLYGPPGTGKTSTILAVARKLYG Q+HNMILELNASD+RGIDVVRQQIQ
Sbjct: 66 RLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVRQQIQ 125
Query: 1056 DFASTQSFSFGAKSHVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNNVNKVIS 877
DFASTQS SFG K VKL+LLDEADAMTKDAQFALRRVIEKYTKSTRFALICN+VNK+I
Sbjct: 126 DFASTQSLSFGVKPSVKLILLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIQ 185
Query: 876 ALQSRCTRFRFAPLDPIHVTERLKHVIEAEGLDVTESGLAALVRLSTGDMRKALNILQST 697
ALQSRCTRFRFAPLD +HVTERLKHVI+AEGLDV +SGL+ALVRLS GDMRKALNILQST
Sbjct: 186 ALQSRCTRFRFAPLDAVHVTERLKHVIKAEGLDVQDSGLSALVRLSNGDMRKALNILQST 245
Query: 696 HMASQQITEEAVYLCTGNPLPKDIEQISHWLLNETFATSFSKISEMKTRKGLALVDIIRE 517
HMASQQITEEAVYLCTGNPLPKDIEQIS+WLLNE ++ S+ +I ++KTRKGLAL+DI+RE
Sbjct: 246 HMASQQITEEAVYLCTGNPLPKDIEQISYWLLNEQYSDSYKRIHDIKTRKGLALIDIVRE 305
Query: 516 VTMFVFRIRMPTDVRVQLLNDMADIEYRLSFGCSDKLQLGSLIASFTKARSALVAAA 346
VTMFVF+I+MP VRVQL+ND+ADIEYRLSFGC+DKLQLGS+IASFT+ARSALVAAA
Sbjct: 306 VTMFVFKIKMPAAVRVQLVNDLADIEYRLSFGCNDKLQLGSVIASFTRARSALVAAA 362
>ref|XP_004502481.1| PREDICTED: replication factor C subunit 5-like isoform X2 [Cicer
arietinum]
Length = 364
Score = 576 bits (1484), Expect = e-161
Identities = 293/358 (81%), Positives = 327/358 (91%), Gaps = 5/358 (1%)
Frame = -3
Query: 1404 PMDVDNTTASNPTLNPNKGKNVVVPGD----GKSTLWVEKYRPQSLADVAAHRDIIDTID 1237
PMD+D T + + NP+KGK V+ + GKSTLWVEKYRPQSL DVAAHRDI+DTID
Sbjct: 8 PMDIDQTNSFSS--NPDKGKTVISAPNPSIGGKSTLWVEKYRPQSLDDVAAHRDIVDTID 65
Query: 1236 RLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGNQFHNMILELNASDERGIDVVRQQIQ 1057
RLT+EN+LPHLLLYGPPGTGKTSTILAVARKLYG Q+HNMILELNASD+RGIDVVRQQIQ
Sbjct: 66 RLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVRQQIQ 125
Query: 1056 DFASTQSFSFG-AKSHVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNNVNKVI 880
DFASTQS SFG K VKL+LLDEADAMTKDAQFALRRVIEKYTKSTRFALICN+VNK+I
Sbjct: 126 DFASTQSLSFGFVKPSVKLILLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKII 185
Query: 879 SALQSRCTRFRFAPLDPIHVTERLKHVIEAEGLDVTESGLAALVRLSTGDMRKALNILQS 700
ALQSRCTRFRFAPLD +HVTERLKHVI+AEGLDV +SGL+ALVRLS GDMRKALNILQS
Sbjct: 186 QALQSRCTRFRFAPLDAVHVTERLKHVIKAEGLDVQDSGLSALVRLSNGDMRKALNILQS 245
Query: 699 THMASQQITEEAVYLCTGNPLPKDIEQISHWLLNETFATSFSKISEMKTRKGLALVDIIR 520
THMASQQITEEAVYLCTGNPLPKDIEQIS+WLLNE ++ S+ +I ++KTRKGLAL+DI+R
Sbjct: 246 THMASQQITEEAVYLCTGNPLPKDIEQISYWLLNEQYSDSYKRIHDIKTRKGLALIDIVR 305
Query: 519 EVTMFVFRIRMPTDVRVQLLNDMADIEYRLSFGCSDKLQLGSLIASFTKARSALVAAA 346
EVTMFVF+I+MP VRVQL+ND+ADIEYRLSFGC+DKLQLGS+IASFT+ARSALVAAA
Sbjct: 306 EVTMFVFKIKMPAAVRVQLVNDLADIEYRLSFGCNDKLQLGSVIASFTRARSALVAAA 363
>ref|XP_003523440.1| PREDICTED: replication factor C subunit 3-like [Glycine max]
Length = 363
Score = 576 bits (1484), Expect = e-161
Identities = 296/363 (81%), Positives = 328/363 (90%), Gaps = 4/363 (1%)
Frame = -3
Query: 1422 MADTMSPMDVDNTTASNPTLNPNKGKNVVVPGD----GKSTLWVEKYRPQSLADVAAHRD 1255
MA+T MD+D+ + T P+K K+VVV + GK+ WVEKYRP SL DVAAHRD
Sbjct: 1 MAETNHHMDIDSDDHTY-TARPDKAKSVVVASNPAAAGKAIPWVEKYRPLSLDDVAAHRD 59
Query: 1254 IIDTIDRLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGNQFHNMILELNASDERGIDV 1075
I+DTIDRLT+EN+LPHLLLYGPPGTGKTSTILAVARKLYG+Q+ NMILELNASD+RGIDV
Sbjct: 60 IVDTIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGSQYQNMILELNASDDRGIDV 119
Query: 1074 VRQQIQDFASTQSFSFGAKSHVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNN 895
VRQQIQDFASTQS SFG KS VKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICN+
Sbjct: 120 VRQQIQDFASTQSLSFGVKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNH 179
Query: 894 VNKVISALQSRCTRFRFAPLDPIHVTERLKHVIEAEGLDVTESGLAALVRLSTGDMRKAL 715
VNK+I ALQSRCTRFRFAPLD +HVTERLKHVI+AEGLDV +SGLAALVRLS GDMRKAL
Sbjct: 180 VNKIIPALQSRCTRFRFAPLDAVHVTERLKHVIKAEGLDVEDSGLAALVRLSNGDMRKAL 239
Query: 714 NILQSTHMASQQITEEAVYLCTGNPLPKDIEQISHWLLNETFATSFSKISEMKTRKGLAL 535
NILQSTHMASQQITEE VYLCTGNPLPKDIEQIS+WLLNE FA SF +I EMKTRKGLAL
Sbjct: 240 NILQSTHMASQQITEETVYLCTGNPLPKDIEQISYWLLNEQFADSFKRIDEMKTRKGLAL 299
Query: 534 VDIIREVTMFVFRIRMPTDVRVQLLNDMADIEYRLSFGCSDKLQLGSLIASFTKARSALV 355
VDI+REVT+FVF+I+MP+ VRVQL+ND+ADIEYRLSFGC+DKLQLGS+IASF++ARSALV
Sbjct: 300 VDIVREVTLFVFKIKMPSAVRVQLMNDLADIEYRLSFGCNDKLQLGSVIASFSRARSALV 359
Query: 354 AAA 346
AAA
Sbjct: 360 AAA 362
>ref|XP_004149801.1| PREDICTED: replication factor C subunit 5-like [Cucumis sativus]
gi|449499057|ref|XP_004160708.1| PREDICTED: replication
factor C subunit 5-like [Cucumis sativus]
Length = 363
Score = 574 bits (1480), Expect = e-161
Identities = 289/363 (79%), Positives = 327/363 (90%), Gaps = 3/363 (0%)
Frame = -3
Query: 1422 MADTMSPMDVDNTTASNPTLNPNKGKNVVVPG---DGKSTLWVEKYRPQSLADVAAHRDI 1252
M++ +S MD+D+ +N KGKNV P +GK+ WVEK+RP+SLADVAAHRDI
Sbjct: 1 MSEVISVMDIDDDNGNNEAEKAVKGKNVASPAAAPEGKAIPWVEKFRPKSLADVAAHRDI 60
Query: 1251 IDTIDRLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGNQFHNMILELNASDERGIDVV 1072
+DTID+LTSEN+LPHLLLYGPPGTGKTSTILAVARKLYG +HNMILELNASD+RGIDVV
Sbjct: 61 VDTIDKLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGTNYHNMILELNASDDRGIDVV 120
Query: 1071 RQQIQDFASTQSFSFGAKSHVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNNV 892
RQQIQDFASTQSFSFGAK+ VKLVLLDEADAMTKDAQFALRRVIEKYTK+TRFALICN+V
Sbjct: 121 RQQIQDFASTQSFSFGAKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHV 180
Query: 891 NKVISALQSRCTRFRFAPLDPIHVTERLKHVIEAEGLDVTESGLAALVRLSTGDMRKALN 712
NK+I ALQSRCTRFRFAPLD HVTERL++VIEAE LDVTE GLAALVRL TGDMRKALN
Sbjct: 181 NKIIPALQSRCTRFRFAPLDNFHVTERLRYVIEAERLDVTEGGLAALVRLCTGDMRKALN 240
Query: 711 ILQSTHMASQQITEEAVYLCTGNPLPKDIEQISHWLLNETFATSFSKISEMKTRKGLALV 532
ILQSTHMASQ ITEEAVYLCTGNP+PKDIEQIS WLLNE F+ SF +ISE+KTRKGLALV
Sbjct: 241 ILQSTHMASQHITEEAVYLCTGNPMPKDIEQISFWLLNEPFSDSFKRISEIKTRKGLALV 300
Query: 531 DIIREVTMFVFRIRMPTDVRVQLLNDMADIEYRLSFGCSDKLQLGSLIASFTKARSALVA 352
DI+REVT+FVF+I MP+++RVQL+ND+ADIEYR++FGC+DKLQLGSLI+SFT ARSALV
Sbjct: 301 DIVREVTLFVFKIEMPSNIRVQLINDLADIEYRMTFGCNDKLQLGSLISSFTGARSALVG 360
Query: 351 AAK 343
AA+
Sbjct: 361 AAQ 363
>ref|XP_004242038.1| PREDICTED: replication factor C subunit 5-like [Solanum lycopersicum]
Length = 357
Score = 571 bits (1471), Expect = e-160
Identities = 288/360 (80%), Positives = 326/360 (90%)
Frame = -3
Query: 1422 MADTMSPMDVDNTTASNPTLNPNKGKNVVVPGDGKSTLWVEKYRPQSLADVAAHRDIIDT 1243
MA+T+S MD+D+ P+KGKN+V + KS WVEK+RPQSL+DVAAHRDI++T
Sbjct: 1 MAETISSMDIDDDKIDT---KPSKGKNIVSNTEPKSVPWVEKFRPQSLSDVAAHRDIVET 57
Query: 1242 IDRLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGNQFHNMILELNASDERGIDVVRQQ 1063
IDRL S N+LPHLLLYGPPGTGKTSTILA+ARKLYG+Q NM+LELNASD+RGIDVVRQQ
Sbjct: 58 IDRLASSNRLPHLLLYGPPGTGKTSTILALARKLYGSQMQNMVLELNASDDRGIDVVRQQ 117
Query: 1062 IQDFASTQSFSFGAKSHVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNNVNKV 883
IQDFASTQS SFGAKS VKLVLLDEADAMTKDAQFALRRVIE+YT++TRFALICNNVNKV
Sbjct: 118 IQDFASTQSISFGAKSAVKLVLLDEADAMTKDAQFALRRVIERYTRNTRFALICNNVNKV 177
Query: 882 ISALQSRCTRFRFAPLDPIHVTERLKHVIEAEGLDVTESGLAALVRLSTGDMRKALNILQ 703
I ALQSRCTRFRFAPLD +HV+ERLKHV+EAE LDV E GL ALVRLS GDMRKALNILQ
Sbjct: 178 IPALQSRCTRFRFAPLDAVHVSERLKHVVEAEQLDVPEGGLKALVRLSNGDMRKALNILQ 237
Query: 702 STHMASQQITEEAVYLCTGNPLPKDIEQISHWLLNETFATSFSKISEMKTRKGLALVDII 523
STHMASQQI+E+AVYLCTGNPLPKDIEQIS+WLLNE FA S +ISE+KTRKGLALVDI+
Sbjct: 238 STHMASQQISEDAVYLCTGNPLPKDIEQISYWLLNEPFAISCKRISEIKTRKGLALVDIV 297
Query: 522 REVTMFVFRIRMPTDVRVQLLNDMADIEYRLSFGCSDKLQLGSLIASFTKARSALVAAAK 343
REVTMFVF+I+MP +VRVQL+N+MADIEYRL+FGC+DKLQLGSLI++FT+ARSALVAAAK
Sbjct: 298 REVTMFVFKIKMPANVRVQLINEMADIEYRLTFGCNDKLQLGSLISAFTRARSALVAAAK 357
>ref|XP_006365532.1| PREDICTED: replication factor C subunit 3-like [Solanum tuberosum]
Length = 357
Score = 570 bits (1470), Expect = e-160
Identities = 287/360 (79%), Positives = 324/360 (90%)
Frame = -3
Query: 1422 MADTMSPMDVDNTTASNPTLNPNKGKNVVVPGDGKSTLWVEKYRPQSLADVAAHRDIIDT 1243
MA+T+S MD+D+ PN GKN+V + +S WVEK+RPQSL+DVAAHRDI++T
Sbjct: 1 MAETISLMDIDDDKIDT---KPNNGKNIVSNTEPRSVPWVEKFRPQSLSDVAAHRDIVET 57
Query: 1242 IDRLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGNQFHNMILELNASDERGIDVVRQQ 1063
IDRL S N+LPHLLLYGPPGTGKTSTILA+ARKLYG+Q HNM+LELNASD+RGIDVVRQQ
Sbjct: 58 IDRLASSNRLPHLLLYGPPGTGKTSTILALARKLYGSQMHNMVLELNASDDRGIDVVRQQ 117
Query: 1062 IQDFASTQSFSFGAKSHVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNNVNKV 883
IQDFASTQS SFGAKS VKLVLLDEADAMTKDAQFALRRVIEKYT++TRFAL+CNNVNKV
Sbjct: 118 IQDFASTQSISFGAKSAVKLVLLDEADAMTKDAQFALRRVIEKYTRNTRFALVCNNVNKV 177
Query: 882 ISALQSRCTRFRFAPLDPIHVTERLKHVIEAEGLDVTESGLAALVRLSTGDMRKALNILQ 703
I ALQSRCTRFRFAPLD +HV+ERLKHV+EAE LDV E GL ALVRLS GDMRKALNILQ
Sbjct: 178 IPALQSRCTRFRFAPLDAVHVSERLKHVVEAEQLDVPEGGLKALVRLSNGDMRKALNILQ 237
Query: 702 STHMASQQITEEAVYLCTGNPLPKDIEQISHWLLNETFATSFSKISEMKTRKGLALVDII 523
STHMASQQI+E+AVYLCTGNPLPKDIEQIS+WLLNE F S +ISE+KTRKGLALVDI+
Sbjct: 238 STHMASQQISEDAVYLCTGNPLPKDIEQISYWLLNEPFTISCKRISEIKTRKGLALVDIV 297
Query: 522 REVTMFVFRIRMPTDVRVQLLNDMADIEYRLSFGCSDKLQLGSLIASFTKARSALVAAAK 343
REVTMFVF+I+MP VRVQL+N+MADIEYRL+FGC+DKLQLGSLI++FT+ARSALVAAAK
Sbjct: 298 REVTMFVFKIKMPATVRVQLINEMADIEYRLTFGCNDKLQLGSLISAFTRARSALVAAAK 357
>ref|XP_003602039.1| Replication factor C subunit [Medicago truncatula]
gi|355491087|gb|AES72290.1| Replication factor C subunit
[Medicago truncatula]
Length = 355
Score = 570 bits (1469), Expect = e-160
Identities = 291/363 (80%), Positives = 324/363 (89%), Gaps = 4/363 (1%)
Frame = -3
Query: 1422 MADTMSPMDVDNTTASNPTLNPNKGKNVVVPGD----GKSTLWVEKYRPQSLADVAAHRD 1255
MA+ MD+D T +KGK V+ G+ GK++LWVEKYRPQSL DVAAHRD
Sbjct: 1 MAEETYAMDIDVT---------DKGKTVIAAGNPSFGGKASLWVEKYRPQSLDDVAAHRD 51
Query: 1254 IIDTIDRLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGNQFHNMILELNASDERGIDV 1075
I+DTIDRLT+EN+LPHLLLYGPPGTGKTSTILAVARKLYG Q+HNMILELNASD+RGIDV
Sbjct: 52 IVDTIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDV 111
Query: 1074 VRQQIQDFASTQSFSFGAKSHVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNN 895
VRQQIQDFASTQS SFG K VKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICN+
Sbjct: 112 VRQQIQDFASTQSLSFGVKPSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNH 171
Query: 894 VNKVISALQSRCTRFRFAPLDPIHVTERLKHVIEAEGLDVTESGLAALVRLSTGDMRKAL 715
VNK+I ALQSRCTRFRFAPLD +HVTERLKHVI AE LDV +SGL+ALVRLS GDMRKAL
Sbjct: 172 VNKIIPALQSRCTRFRFAPLDAVHVTERLKHVINAERLDVQDSGLSALVRLSNGDMRKAL 231
Query: 714 NILQSTHMASQQITEEAVYLCTGNPLPKDIEQISHWLLNETFATSFSKISEMKTRKGLAL 535
NILQSTHMASQQITEEAVYLCTGNPLPKDIEQIS+WLLNE ++ SF +I +MKTRKGLAL
Sbjct: 232 NILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNEQYSESFKRIYDMKTRKGLAL 291
Query: 534 VDIIREVTMFVFRIRMPTDVRVQLLNDMADIEYRLSFGCSDKLQLGSLIASFTKARSALV 355
+DI+REVTMFVF+I MP+ VRVQL+ND+ADIEYRLSFGC+DKLQLGS++ASFT+ARSA+V
Sbjct: 292 IDIVREVTMFVFKINMPSAVRVQLVNDLADIEYRLSFGCNDKLQLGSVVASFTRARSAMV 351
Query: 354 AAA 346
AAA
Sbjct: 352 AAA 354
>ref|XP_006390087.1| hypothetical protein EUTSA_v10018756mg [Eutrema salsugineum]
gi|557086521|gb|ESQ27373.1| hypothetical protein
EUTSA_v10018756mg [Eutrema salsugineum]
Length = 361
Score = 562 bits (1449), Expect = e-157
Identities = 293/364 (80%), Positives = 325/364 (89%), Gaps = 4/364 (1%)
Frame = -3
Query: 1422 MADTMSPMDVDNTTASNPTLNP-NKGKNVVV---PGDGKSTLWVEKYRPQSLADVAAHRD 1255
M D S MD+D N + P NKGK++ P K+T WVEKYRPQSL DVAAHRD
Sbjct: 1 MTDITSAMDID--VDENHSRKPSNKGKDIAGFGGPPQSKATPWVEKYRPQSLDDVAAHRD 58
Query: 1254 IIDTIDRLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGNQFHNMILELNASDERGIDV 1075
IIDTIDRLT+ENKLPHLLLYGPPGTGKTSTILAVARKLYG ++ NMILELNASD+RGIDV
Sbjct: 59 IIDTIDRLTNENKLPHLLLYGPPGTGKTSTILAVARKLYGPKYRNMILELNASDDRGIDV 118
Query: 1074 VRQQIQDFASTQSFSFGAKSHVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNN 895
VRQQIQDFASTQSFS G KS VKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALI N+
Sbjct: 119 VRQQIQDFASTQSFSLG-KSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALIGNH 177
Query: 894 VNKVISALQSRCTRFRFAPLDPIHVTERLKHVIEAEGLDVTESGLAALVRLSTGDMRKAL 715
VNK+I ALQSRCTRFRFAPLDP+HV++RLKHVIEAEGLDV+ESGLAALVRLS GDMRKA+
Sbjct: 178 VNKIIPALQSRCTRFRFAPLDPVHVSQRLKHVIEAEGLDVSESGLAALVRLSNGDMRKAM 237
Query: 714 NILQSTHMASQQITEEAVYLCTGNPLPKDIEQISHWLLNETFATSFSKISEMKTRKGLAL 535
NILQST+MAS++ITEE VYLCTGNPLP DIEQISHWLLNE FA S+ ISEMKTRKGLA+
Sbjct: 238 NILQSTNMASEKITEEEVYLCTGNPLPMDIEQISHWLLNEPFAESYKNISEMKTRKGLAI 297
Query: 534 VDIIREVTMFVFRIRMPTDVRVQLLNDMADIEYRLSFGCSDKLQLGSLIASFTKARSALV 355
VDI+REVTMFVF+I MP++VRVQL+ND+ADIEYRLSFGC+DKLQLG++I++FT ARSALV
Sbjct: 298 VDIVREVTMFVFKISMPSNVRVQLINDLADIEYRLSFGCNDKLQLGAIISTFTHARSALV 357
Query: 354 AAAK 343
AAAK
Sbjct: 358 AAAK 361
>ref|XP_004290888.1| PREDICTED: replication factor C subunit 5-like [Fragaria vesca subsp.
vesca]
Length = 363
Score = 560 bits (1443), Expect = e-157
Identities = 288/364 (79%), Positives = 323/364 (88%), Gaps = 4/364 (1%)
Frame = -3
Query: 1422 MADTMSPMDVDNTTASNPTLNPN--KGKNVVVPGD--GKSTLWVEKYRPQSLADVAAHRD 1255
MA+ ++PMD+D + +L PN KGKNV V G G++T WVEKYRPQSLADVAAHRD
Sbjct: 1 MAELITPMDIDGDDTNPSSLKPNNDKGKNVAVSGPIHGEATPWVEKYRPQSLADVAAHRD 60
Query: 1254 IIDTIDRLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGNQFHNMILELNASDERGIDV 1075
I+DTIDRL SEN+LPHLLLYGPPGTGKTSTILAVARKLYG Q+ +ILELNASD+RGIDV
Sbjct: 61 IVDTIDRLASENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYRKIILELNASDDRGIDV 120
Query: 1074 VRQQIQDFASTQSFSFGAKSHVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNN 895
VRQQIQ+FAS+Q K VKLVLLDEADAMTKDAQFALRRVIEKYTK+TRF LICN+
Sbjct: 121 VRQQIQNFASSQGLET-EKVPVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFTLICNH 179
Query: 894 VNKVISALQSRCTRFRFAPLDPIHVTERLKHVIEAEGLDVTESGLAALVRLSTGDMRKAL 715
VNK+I ALQSRCTRFRFAPLD HV +RLKHVI+AEGLDV E+GLAA+VRLS GDMRKAL
Sbjct: 180 VNKIIPALQSRCTRFRFAPLDSFHVKDRLKHVIDAEGLDVFENGLAAVVRLSNGDMRKAL 239
Query: 714 NILQSTHMASQQITEEAVYLCTGNPLPKDIEQISHWLLNETFATSFSKISEMKTRKGLAL 535
NILQSTHMASQ+ITEEAVYLCTGNPLPKDIEQISHWLLNE+F +F +IS+MKT KGLAL
Sbjct: 240 NILQSTHMASQKITEEAVYLCTGNPLPKDIEQISHWLLNESFTEAFKRISDMKTIKGLAL 299
Query: 534 VDIIREVTMFVFRIRMPTDVRVQLLNDMADIEYRLSFGCSDKLQLGSLIASFTKARSALV 355
VDI+REVTMFVF+I+MP DVRV L+ND+ADIEYRLSFGC+DKLQLGS+IA+FTKARSALV
Sbjct: 300 VDIVREVTMFVFKIKMPPDVRVLLINDLADIEYRLSFGCNDKLQLGSIIATFTKARSALV 359
Query: 354 AAAK 343
AAAK
Sbjct: 360 AAAK 363
>gb|EOY16353.1| Replication factor C / DNA polymerase III gamma-tau subunit
[Theobroma cacao]
Length = 436
Score = 558 bits (1437), Expect = e-156
Identities = 306/436 (70%), Positives = 334/436 (76%), Gaps = 76/436 (17%)
Frame = -3
Query: 1422 MADTMSPMDVD---NTTASNPTLNPNKGKNVVVPGDGKSTLWVEKYRPQSLADVAAHRDI 1252
MA+ +S MD+D N N + +KGKNVV D K+T WVEKYRPQSLADVAAHRDI
Sbjct: 1 MAEVVSLMDIDEDDNHQKENHSRKLSKGKNVVTTNDTKATPWVEKYRPQSLADVAAHRDI 60
Query: 1251 IDTIDRLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGNQFHNMILELNASDERGIDVV 1072
+DTIDRLTSEN+LPHLLLYGPPGTGKTSTILAVARKLYG +HNMILELNASDERGIDVV
Sbjct: 61 VDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAHYHNMILELNASDERGIDVV 120
Query: 1071 RQQIQDFASTQSFSFG---------------------------------AKSHVKLVLLD 991
RQQIQDFASTQSFSFG AKS VKL+LLD
Sbjct: 121 RQQIQDFASTQSFSFGVAVQNLTLHKLVVVVISIWLLSSIAAENALGCLAKSSVKLILLD 180
Query: 990 EADAMTKDAQFALRRVIEKYTKSTRFALICNNVNKVISALQSRCTRFRFAPLDPIHVTER 811
EADAMTKDAQFALRRVIEKYTK+TRFALICN+VNK+I ALQSRCTRFRFAPLDPIHVTER
Sbjct: 181 EADAMTKDAQFALRRVIEKYTKNTRFALICNHVNKIIPALQSRCTRFRFAPLDPIHVTER 240
Query: 810 LKHVIEAEG-----------------LDVTESGLAALVRLSTGDMRKALNILQ------- 703
LK+VIEAE LDV + GLAALVRLS GDMRKALNILQ
Sbjct: 241 LKNVIEAERHVFCFLMSLFCAHSVDLLDVPDCGLAALVRLSNGDMRKALNILQSFCLAVR 300
Query: 702 ----------------STHMASQQITEEAVYLCTGNPLPKDIEQISHWLLNETFATSFSK 571
STHMASQQITEEAVYLCTGNPLPKDIEQIS+WLLNE+FA SF +
Sbjct: 301 IVTEKEGRVEMLNILLSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNESFAESFKR 360
Query: 570 ISEMKTRKGLALVDIIREVTMFVFRIRMPTDVRVQLLNDMADIEYRLSFGCSDKLQLGSL 391
ISE+KTRKGLALVDI+REVTMFVF+I+MP+DVRVQL+ND+ADIEY LSFGC+DKLQLGSL
Sbjct: 361 ISEIKTRKGLALVDIVREVTMFVFKIKMPSDVRVQLINDLADIEYHLSFGCNDKLQLGSL 420
Query: 390 IASFTKARSALVAAAK 343
IA+FT+ARSALVAAAK
Sbjct: 421 IATFTRARSALVAAAK 436
>gb|ESW09418.1| hypothetical protein PHAVU_009G126000g [Phaseolus vulgaris]
Length = 359
Score = 556 bits (1432), Expect = e-155
Identities = 284/360 (78%), Positives = 319/360 (88%), Gaps = 4/360 (1%)
Frame = -3
Query: 1413 TMSPMDVDNTTASNPTLNPNKGKNVV----VPGDGKSTLWVEKYRPQSLADVAAHRDIID 1246
T PM++D+ + + G+ V+ +P K+ WVEKYRPQSL DVAAHRDI+D
Sbjct: 2 TTHPMEIDSDGDDH---THSAGECVIGSEDLPAFDKAIPWVEKYRPQSLDDVAAHRDIVD 58
Query: 1245 TIDRLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGNQFHNMILELNASDERGIDVVRQ 1066
TID+LT+EN+LPHLLLYGPPGTGKTSTILAVARKLYG++F NMILELNASD+RGIDVVRQ
Sbjct: 59 TIDKLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGSRFRNMILELNASDDRGIDVVRQ 118
Query: 1065 QIQDFASTQSFSFGAKSHVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNNVNK 886
QIQDFASTQS SFG K VKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICN+VNK
Sbjct: 119 QIQDFASTQSLSFGVKYSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNK 178
Query: 885 VISALQSRCTRFRFAPLDPIHVTERLKHVIEAEGLDVTESGLAALVRLSTGDMRKALNIL 706
+I ALQSRCTRFRFAPLD +HVTER+KHVI+AEGLDV + GL ALVRLS GDMRKALNIL
Sbjct: 179 IIPALQSRCTRFRFAPLDAVHVTERMKHVIKAEGLDVQDDGLVALVRLSNGDMRKALNIL 238
Query: 705 QSTHMASQQITEEAVYLCTGNPLPKDIEQISHWLLNETFATSFSKISEMKTRKGLALVDI 526
QSTHMA+QQITEEA+YLCTGNPLPKDIEQIS+WLLNE + SF +I EMKTRKGLALVDI
Sbjct: 239 QSTHMATQQITEEAIYLCTGNPLPKDIEQISYWLLNEQYTDSFKRIEEMKTRKGLALVDI 298
Query: 525 IREVTMFVFRIRMPTDVRVQLLNDMADIEYRLSFGCSDKLQLGSLIASFTKARSALVAAA 346
IREV MFVF+I+MP+ VRVQL+ND+ADIEYRLSFGC+DKLQLGS+IASFT+ARSALVAAA
Sbjct: 299 IREVIMFVFKIKMPSAVRVQLMNDLADIEYRLSFGCNDKLQLGSVIASFTRARSALVAAA 358
>ref|XP_006856708.1| hypothetical protein AMTR_s00054p00174840 [Amborella trichopoda]
gi|548860608|gb|ERN18175.1| hypothetical protein
AMTR_s00054p00174840 [Amborella trichopoda]
Length = 359
Score = 550 bits (1416), Expect = e-154
Identities = 284/360 (78%), Positives = 317/360 (88%), Gaps = 5/360 (1%)
Frame = -3
Query: 1407 SPMDVDNTTASNPT-LNPNKGKNV----VVPGDGKSTLWVEKYRPQSLADVAAHRDIIDT 1243
SPMDVD + L KGK V ++P K+T WVEKYRPQSLADVAAH+DIIDT
Sbjct: 3 SPMDVDVEREQDMRYLQTGKGKVVEREQLLP---KATPWVEKYRPQSLADVAAHKDIIDT 59
Query: 1242 IDRLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGNQFHNMILELNASDERGIDVVRQQ 1063
+DRLT+EN+LPHLLLYGPPGTGKTST+LAVARKLYG NMILELNASD+RGIDVVRQQ
Sbjct: 60 VDRLTNENRLPHLLLYGPPGTGKTSTVLAVARKLYGGNLRNMILELNASDDRGIDVVRQQ 119
Query: 1062 IQDFASTQSFSFGAKSHVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNNVNKV 883
IQDFASTQSFSFGAKS VKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICN+VNK+
Sbjct: 120 IQDFASTQSFSFGAKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKI 179
Query: 882 ISALQSRCTRFRFAPLDPIHVTERLKHVIEAEGLDVTESGLAALVRLSTGDMRKALNILQ 703
I ALQSRCTRFRFAPLD HV ERL++VI+AEGLDV ESGL+A+VRLS GDMRKALNILQ
Sbjct: 180 IPALQSRCTRFRFAPLDAAHVRERLQYVIKAEGLDVDESGLSAVVRLSNGDMRKALNILQ 239
Query: 702 STHMASQQITEEAVYLCTGNPLPKDIEQISHWLLNETFATSFSKISEMKTRKGLALVDII 523
STHMASQ ++E+AVYLCTGNP+PKD+EQIS+WLLNE FATS+ IS+MKT KGLALVDI+
Sbjct: 240 STHMASQHVSEKAVYLCTGNPMPKDVEQISNWLLNEDFATSYKYISDMKTTKGLALVDIV 299
Query: 522 REVTMFVFRIRMPTDVRVQLLNDMADIEYRLSFGCSDKLQLGSLIASFTKARSALVAAAK 343
REVTMF+F I+MP+ VRVQL+ND+ADIEYRLSFGC+DKLQLGSLI SFT R A+ AAAK
Sbjct: 300 REVTMFIFMIKMPSTVRVQLINDLADIEYRLSFGCNDKLQLGSLIGSFTHVRCAMEAAAK 359
>ref|NP_001048280.1| Os02g0775200 [Oryza sativa Japonica Group]
gi|75132556|sp|Q6YZ54.1|RFC3_ORYSJ RecName:
Full=Replication factor C subunit 3; Short=OsRFC3;
AltName: Full=Activator 1 subunit 3
gi|46805779|dbj|BAD17147.1| putative replication factor C
36kDa subunit [Oryza sativa Japonica Group]
gi|46806135|dbj|BAD17365.1| putative replication factor C
36kDa subunit [Oryza sativa Japonica Group]
gi|113537811|dbj|BAF10194.1| Os02g0775200 [Oryza sativa
Japonica Group] gi|215697717|dbj|BAG91711.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|218191668|gb|EEC74095.1| hypothetical protein
OsI_09136 [Oryza sativa Indica Group]
Length = 361
Score = 548 bits (1413), Expect = e-153
Identities = 280/360 (77%), Positives = 321/360 (89%), Gaps = 2/360 (0%)
Frame = -3
Query: 1419 ADTMSPMDVDNTTASNPTLNPNKGKNVV--VPGDGKSTLWVEKYRPQSLADVAAHRDIID 1246
A +PMD+D A+ P KGK + PG G++ WVEKYRPQSL DVAAHRDI+D
Sbjct: 4 ATAATPMDID--AAAPPPGAAAKGKAPLSSTPG-GRAAPWVEKYRPQSLGDVAAHRDIVD 60
Query: 1245 TIDRLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGNQFHNMILELNASDERGIDVVRQ 1066
TIDRLT+EN+LPHLLLYGPPGTGKTSTILAVARKLYG+Q+ NMILELNASDERGIDVVRQ
Sbjct: 61 TIDRLTNENRLPHLLLYGPPGTGKTSTILAVARKLYGSQYGNMILELNASDERGIDVVRQ 120
Query: 1065 QIQDFASTQSFSFGAKSHVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNNVNK 886
QIQDFAS +S SFGAK VK+VLLDEADAMTKDAQFALRRVIEK+T+STRFALICN+VNK
Sbjct: 121 QIQDFASARSLSFGAKQSVKMVLLDEADAMTKDAQFALRRVIEKHTRSTRFALICNHVNK 180
Query: 885 VISALQSRCTRFRFAPLDPIHVTERLKHVIEAEGLDVTESGLAALVRLSTGDMRKALNIL 706
+I ALQSRCTRFRFAPLD HV ERLKH+I++EGLDV + GL ALVRLS GDMRKALNIL
Sbjct: 181 IIPALQSRCTRFRFAPLDGTHVRERLKHIIQSEGLDVDDGGLTALVRLSNGDMRKALNIL 240
Query: 705 QSTHMASQQITEEAVYLCTGNPLPKDIEQISHWLLNETFATSFSKISEMKTRKGLALVDI 526
QSTHMAS+QITEEAVYLCTGNP+PKDIEQI++WLLNE+F+TSF IS+MK RKGLALVDI
Sbjct: 241 QSTHMASKQITEEAVYLCTGNPMPKDIEQIAYWLLNESFSTSFKCISDMKMRKGLALVDI 300
Query: 525 IREVTMFVFRIRMPTDVRVQLLNDMADIEYRLSFGCSDKLQLGSLIASFTKARSALVAAA 346
IREVTMFVF+I+MP+DVR++L+ND+ADIEYRLSF C+DKLQLG+LI++FT AR+A+VAAA
Sbjct: 301 IREVTMFVFKIQMPSDVRIKLINDLADIEYRLSFACNDKLQLGALISTFTGARTAMVAAA 360