BLASTX nr result

ID: Achyranthes23_contig00028384 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00028384
         (211 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXC20793.1| E3 ubiquitin-protein ligase [Morus notabilis]           59   7e-07
ref|XP_002516614.1| ring finger protein, putative [Ricinus commu...    59   7e-07
ref|XP_004138872.1| PREDICTED: E3 ubiquitin-protein ligase At4g1...    58   1e-06
ref|XP_002309588.2| zinc finger family protein [Populus trichoca...    57   3e-06
gb|EOY31365.1| RING/U-box superfamily protein [Theobroma cacao]        57   3e-06
ref|XP_006356611.1| PREDICTED: E3 ubiquitin-protein ligase At1g1...    56   6e-06
ref|XP_003546278.1| PREDICTED: E3 ubiquitin-protein ligase At1g6...    55   1e-05
ref|XP_003543658.1| PREDICTED: E3 ubiquitin-protein ligase At1g6...    55   1e-05

>gb|EXC20793.1| E3 ubiquitin-protein ligase [Morus notabilis]
          Length = 432

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 34/75 (45%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
 Frame = -3

Query: 209 YWRYLHRNQSSEQDTPQSRQHSTNDNP------SIGHSQTQEDENHATTSNRSASGLSVG 48
           YWRY H NQ SEQD+ Q RQ S  + P      S+      ED     +S+RS  G  + 
Sbjct: 160 YWRYRHHNQLSEQDSAQPRQTSQINVPAVPFSLSVSRMPEGEDRQSGASSHRSRQGSEI- 218

Query: 47  LRNARLKASIEYFKM 3
             NARLKA +EYFKM
Sbjct: 219 -MNARLKALVEYFKM 232


>ref|XP_002516614.1| ring finger protein, putative [Ricinus communis]
           gi|223544434|gb|EEF45955.1| ring finger protein,
           putative [Ricinus communis]
          Length = 437

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 32/73 (43%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
 Frame = -3

Query: 209 YWRYLHRNQSSEQDTPQSRQHS----TNDNPSIGHSQTQEDENHATTSNRSASGLSVGLR 42
           YWRY HRNQ +EQ+  Q RQ S      D+ SI  ++  E  +  ++S  S  G + G  
Sbjct: 159 YWRYRHRNQVTEQEAAQPRQSSHFSVPGDSISISITRNSEVVDRRSSSTSSRGGQNSGAL 218

Query: 41  NARLKASIEYFKM 3
           NARLK  +EYFKM
Sbjct: 219 NARLKTLVEYFKM 231


>ref|XP_004138872.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Cucumis
           sativus] gi|449499624|ref|XP_004160867.1| PREDICTED: E3
           ubiquitin-protein ligase At4g11680-like [Cucumis
           sativus]
          Length = 424

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 33/76 (43%), Positives = 43/76 (56%), Gaps = 7/76 (9%)
 Frame = -3

Query: 209 YWRYLHRNQSSEQDTPQSRQHSTNDNP-------SIGHSQTQEDENHATTSNRSASGLSV 51
           YWRY HRNQ+SEQD+ QS Q S+  N        S+  +   E+  H   S R + G   
Sbjct: 158 YWRYRHRNQASEQDSLQSSQSSSRINVPAGPFSLSVSRASEGEELQHPAPSPRGSQG--S 215

Query: 50  GLRNARLKASIEYFKM 3
           G+ +ARLK  +EYFKM
Sbjct: 216 GVLSARLKVLVEYFKM 231


>ref|XP_002309588.2| zinc finger family protein [Populus trichocarpa]
           gi|550337127|gb|EEE93111.2| zinc finger family protein
           [Populus trichocarpa]
          Length = 429

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 33/76 (43%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
 Frame = -3

Query: 209 YWRYLHRNQSSEQDTPQSRQHSTNDNP-------SIGHSQTQEDENHATTSNRSASGLSV 51
           YWRY +RNQS EQD+ Q+ Q S + N        S+  +   +D   ATTS R   G   
Sbjct: 158 YWRYRYRNQSLEQDSAQNHQGSAHINVPAGPFSLSVSRNSESDDRRSATTSPR---GSQN 214

Query: 50  GLRNARLKASIEYFKM 3
            + NARLK  +EYFKM
Sbjct: 215 AVLNARLKVLVEYFKM 230


>gb|EOY31365.1| RING/U-box superfamily protein [Theobroma cacao]
          Length = 446

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 5/74 (6%)
 Frame = -3

Query: 209 YWRYLHRNQSSEQDTPQSRQHSTNDNP-----SIGHSQTQEDENHATTSNRSASGLSVGL 45
           YWRY HRNQ+SEQD P    H+++ N      S+  ++T +  +H   +     G + G+
Sbjct: 157 YWRYRHRNQASEQD-PVQHHHTSHINVPAGPFSLSVTRTSDGGDHRPATMSPRGGQNAGV 215

Query: 44  RNARLKASIEYFKM 3
            +AR+KA +EYFKM
Sbjct: 216 TSARIKALVEYFKM 229


>ref|XP_006356611.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like [Solanum
           tuberosum]
          Length = 421

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 32/72 (44%), Positives = 44/72 (61%), Gaps = 3/72 (4%)
 Frame = -3

Query: 209 YWRYLHRNQSSEQDTPQSRQHSTN-DNPSIGHSQTQ--EDENHATTSNRSASGLSVGLRN 39
           YWR+ HRNQ+S+QD+ Q  Q S+  + P+   S T+  E E   TT+  S  G S  L +
Sbjct: 159 YWRFRHRNQNSDQDSSQQPQISSQAELPARPSSSTRSSEGEGRQTTATASTGGQSNELLS 218

Query: 38  ARLKASIEYFKM 3
            R+KA +EYFKM
Sbjct: 219 RRVKAFVEYFKM 230


>ref|XP_003546278.1| PREDICTED: E3 ubiquitin-protein ligase At1g63170-like [Glycine max]
          Length = 424

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
 Frame = -3

Query: 209 YWRYLHRNQSSEQDTPQSRQHSTNDNP------SIGHSQTQEDENHATTSNRSASGLSVG 48
           YWR+ +RNQS+EQDT Q+ Q S+  NP      SI  S   ++EN   T + S + +  G
Sbjct: 160 YWRFRNRNQSNEQDTSQASQGSSGSNPPDRSYNSIHVSHVSDEENGHATRSASRNTIMPG 219

Query: 47  LRNARLKASIEYFKM 3
              +RL   +++FKM
Sbjct: 220 AFTSRLNGLVDHFKM 234


>ref|XP_003543658.1| PREDICTED: E3 ubiquitin-protein ligase At1g63170 [Glycine max]
          Length = 419

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
 Frame = -3

Query: 209 YWRYLHRNQSSEQDTPQSRQHSTNDNP------SIGHSQTQEDENHATTSNRSASGLSVG 48
           YWR+ +RNQS+EQDT Q+ Q S+  NP      SI  S   ++EN   T + S + +  G
Sbjct: 160 YWRFRNRNQSNEQDTSQASQGSSGSNPPDRSYTSIYVSHVSDEENGHATQSASRNTIMPG 219

Query: 47  LRNARLKASIEYFKM 3
              +RL   +++FKM
Sbjct: 220 AFTSRLNGLVDHFKM 234


Top