BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00028301
         (887 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAC80139.1| DNA-dependent RNA polymerase [Spinacia oleracea]      583   e-164
emb|CBI36559.3| unnamed protein product [Vitis vinifera]              511   e-142
ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   511   e-142
gb|EOY31498.1| DNA/RNA polymerases superfamily protein isoform 3...   509   e-142
gb|EOY31497.1| DNA/RNA polymerases superfamily protein isoform 2...   509   e-142
gb|EOY31496.1| DNA/RNA polymerases superfamily protein isoform 1...   509   e-142
gb|EMJ04424.1| hypothetical protein PRUPE_ppa000868mg [Prunus pe...   507   e-141
ref|XP_004287148.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   505   e-140
ref|XP_006296121.1| hypothetical protein CARUB_v10025273mg [Caps...   504   e-140
ref|XP_002880548.1| PDE319/SCA3 [Arabidopsis lyrata subsp. lyrat...   504   e-140
ref|XP_006404912.1| hypothetical protein EUTSA_v10000030mg [Eutr...   503   e-140
ref|XP_006474044.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   503   e-140
ref|XP_002325119.1| DNA-directed RNA polymerase family protein [...   503   e-140
ref|NP_973525.2| DNA-directed RNA polymerase 3 [Arabidopsis thal...   502   e-140
ref|NP_179989.1| DNA-directed RNA polymerase 3 [Arabidopsis thal...   502   e-140
ref|XP_002308414.1| hypothetical protein POPTR_0006s19490g [Popu...   502   e-140
dbj|BAE98468.1| chloroplast single subunit DNA-dependent RNA pol...   502   e-140
ref|XP_006453566.1| hypothetical protein CICLE_v10007333mg [Citr...   498   e-138
ref|XP_003525896.1| PREDICTED: DNA-directed RNA polymerase 3B, c...   496   e-138
sp|Q8L6J1.2|RPO3B_TOBAC RecName: Full=DNA-directed RNA polymeras...   493   e-137

>emb|CAC80139.1| DNA-dependent RNA polymerase [Spinacia oleracea]
          Length = 989

 Score =  583 bits (1503), Expect = e-164
 Identities = 273/295 (92%), Positives = 286/295 (96%)
 Frame = +1

Query: 1    MLIPPKNWRGYDKGGYLFLPSYVMRTHGSRKQQEAMRKTPPQQMQKVFEALNTLGITKWR 180
            MLIPPKNW+GYDKGGYLFLPSYVMRTHGSRKQQ+AMRKTPPQQMQKVFEALNTLG TKWR
Sbjct: 420  MLIPPKNWKGYDKGGYLFLPSYVMRTHGSRKQQDAMRKTPPQQMQKVFEALNTLGHTKWR 479

Query: 181  INRKVLGVVESLWASGGNIAGLVNCEDVPLPEKPLTEDPTEIDTWKWSVRKAKKINRERH 360
            INRKVLGVVE+LWASGGNI GLVNC+DVPLPEKPLTEDP EIDTWKWSVRKAKKINRERH
Sbjct: 480  INRKVLGVVENLWASGGNIGGLVNCDDVPLPEKPLTEDPAEIDTWKWSVRKAKKINRERH 539

Query: 361  ALRCDIELKLSVAQKMRDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRS 540
            ALRCD+ELK+SVAQKM+DEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFA GR 
Sbjct: 540  ALRCDVELKISVAQKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFASGRP 599

Query: 541  LGESGLHWLKIHLANVYAGGVDKLSYEARVAFVENHLAEIFDSASNPIYGNRWWLTAEDP 720
            LG++GLHWLKIHLANVYAGGVDKLSYEAR AFVENHL E+FDSA+NPI GNRWWL+AEDP
Sbjct: 600  LGKTGLHWLKIHLANVYAGGVDKLSYEARAAFVENHLEEVFDSATNPINGNRWWLSAEDP 659

Query: 721  FQCLAACIDLSGALNSSSPHSFISNLPIHQDGSCNGLQHYAALGRDSKEAAAVNL 885
            FQCLAACIDL+GALNSSSPHSFIS LPIHQDGSCNGLQHYAALGRDSKEAAAVNL
Sbjct: 660  FQCLAACIDLTGALNSSSPHSFISYLPIHQDGSCNGLQHYAALGRDSKEAAAVNL 714


>emb|CBI36559.3| unnamed protein product [Vitis vinifera]
          Length = 808

 Score =  511 bits (1316), Expect = e-142
 Identities = 237/295 (80%), Positives = 269/295 (91%)
 Frame = +1

Query: 1    MLIPPKNWRGYDKGGYLFLPSYVMRTHGSRKQQEAMRKTPPQQMQKVFEALNTLGITKWR 180
            MLIPPK W+GYDKGGYLFLPSYVMRTHGSRKQQ+A++  P +Q+QKVFEAL+TLG TKWR
Sbjct: 239  MLIPPKKWKGYDKGGYLFLPSYVMRTHGSRKQQDAVKSVPRRQLQKVFEALDTLGNTKWR 298

Query: 181  INRKVLGVVESLWASGGNIAGLVNCEDVPLPEKPLTEDPTEIDTWKWSVRKAKKINRERH 360
            INR+VL VVES+WA GGN+ GLV+ E+VPLPEKP TED TEI  WKW+ RKAKKIN+ERH
Sbjct: 299  INRRVLSVVESIWARGGNLGGLVDRENVPLPEKPSTEDLTEIQNWKWNARKAKKINQERH 358

Query: 361  ALRCDIELKLSVAQKMRDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRS 540
            +LRCD E+KLSVA+KM+DEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGR 
Sbjct: 359  SLRCDTEIKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRP 418

Query: 541  LGESGLHWLKIHLANVYAGGVDKLSYEARVAFVENHLAEIFDSASNPIYGNRWWLTAEDP 720
            LG+SGL WLKI LAN+YAGGV+KLSY+ R+AFV+NHL ++FDSA NP+ GNRWWLTAEDP
Sbjct: 419  LGKSGLRWLKIQLANLYAGGVEKLSYDGRLAFVDNHLDDVFDSADNPLNGNRWWLTAEDP 478

Query: 721  FQCLAACIDLSGALNSSSPHSFISNLPIHQDGSCNGLQHYAALGRDSKEAAAVNL 885
            FQCLAACI+LS AL SSSPH+ IS+LPIHQDGSCNGLQHYAALGR+S EA+AVNL
Sbjct: 479  FQCLAACINLSEALRSSSPHTVISHLPIHQDGSCNGLQHYAALGRNSLEASAVNL 533


>ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Vitis
            vinifera]
          Length = 979

 Score =  511 bits (1316), Expect = e-142
 Identities = 237/295 (80%), Positives = 269/295 (91%)
 Frame = +1

Query: 1    MLIPPKNWRGYDKGGYLFLPSYVMRTHGSRKQQEAMRKTPPQQMQKVFEALNTLGITKWR 180
            MLIPPK W+GYDKGGYLFLPSYVMRTHGSRKQQ+A++  P +Q+QKVFEAL+TLG TKWR
Sbjct: 410  MLIPPKKWKGYDKGGYLFLPSYVMRTHGSRKQQDAVKSVPRRQLQKVFEALDTLGNTKWR 469

Query: 181  INRKVLGVVESLWASGGNIAGLVNCEDVPLPEKPLTEDPTEIDTWKWSVRKAKKINRERH 360
            INR+VL VVES+WA GGN+ GLV+ E+VPLPEKP TED TEI  WKW+ RKAKKIN+ERH
Sbjct: 470  INRRVLSVVESIWARGGNLGGLVDRENVPLPEKPSTEDLTEIQNWKWNARKAKKINQERH 529

Query: 361  ALRCDIELKLSVAQKMRDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRS 540
            +LRCD E+KLSVA+KM+DEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGR 
Sbjct: 530  SLRCDTEIKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRP 589

Query: 541  LGESGLHWLKIHLANVYAGGVDKLSYEARVAFVENHLAEIFDSASNPIYGNRWWLTAEDP 720
            LG+SGL WLKI LAN+YAGGV+KLSY+ R+AFV+NHL ++FDSA NP+ GNRWWLTAEDP
Sbjct: 590  LGKSGLRWLKIQLANLYAGGVEKLSYDGRLAFVDNHLDDVFDSADNPLNGNRWWLTAEDP 649

Query: 721  FQCLAACIDLSGALNSSSPHSFISNLPIHQDGSCNGLQHYAALGRDSKEAAAVNL 885
            FQCLAACI+LS AL SSSPH+ IS+LPIHQDGSCNGLQHYAALGR+S EA+AVNL
Sbjct: 650  FQCLAACINLSEALRSSSPHTVISHLPIHQDGSCNGLQHYAALGRNSLEASAVNL 704


>gb|EOY31498.1| DNA/RNA polymerases superfamily protein isoform 3 [Theobroma cacao]
          Length = 927

 Score =  509 bits (1310), Expect = e-142
 Identities = 237/295 (80%), Positives = 266/295 (90%)
 Frame = +1

Query: 1    MLIPPKNWRGYDKGGYLFLPSYVMRTHGSRKQQEAMRKTPPQQMQKVFEALNTLGITKWR 180
            ML+PPK W+GYDKGGYLFLPSYVMRTHGSRKQQ+A++    ++MQKVFEAL+TLG TKWR
Sbjct: 409  MLVPPKKWKGYDKGGYLFLPSYVMRTHGSRKQQDALKGVHVKKMQKVFEALDTLGSTKWR 468

Query: 181  INRKVLGVVESLWASGGNIAGLVNCEDVPLPEKPLTEDPTEIDTWKWSVRKAKKINRERH 360
            +N+KVL VVES+WASGGNIAGLV+  D+P+PEKP +ED TE   WKWSVRKA KINRERH
Sbjct: 469  VNKKVLAVVESIWASGGNIAGLVDRNDIPIPEKPSSEDSTESQEWKWSVRKANKINRERH 528

Query: 361  ALRCDIELKLSVAQKMRDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRS 540
            + RCD ELKLSVA+KM +EEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGR 
Sbjct: 529  SQRCDTELKLSVARKMENEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRP 588

Query: 541  LGESGLHWLKIHLANVYAGGVDKLSYEARVAFVENHLAEIFDSASNPIYGNRWWLTAEDP 720
            LG SGLHWLKIHLAN++AGGV+KLS++ R+AFV+NHL +IFDSA NPI GNRWWLTAEDP
Sbjct: 589  LGRSGLHWLKIHLANLFAGGVEKLSHDGRLAFVDNHLDDIFDSAENPINGNRWWLTAEDP 648

Query: 721  FQCLAACIDLSGALNSSSPHSFISNLPIHQDGSCNGLQHYAALGRDSKEAAAVNL 885
            FQCLAACI+LS +L SSSPHS +S LPIHQDGSCNGLQHYAALGRDS EAAAVNL
Sbjct: 649  FQCLAACINLSESLKSSSPHSVLSYLPIHQDGSCNGLQHYAALGRDSLEAAAVNL 703


>gb|EOY31497.1| DNA/RNA polymerases superfamily protein isoform 2 [Theobroma cacao]
          Length = 857

 Score =  509 bits (1310), Expect = e-142
 Identities = 237/295 (80%), Positives = 266/295 (90%)
 Frame = +1

Query: 1    MLIPPKNWRGYDKGGYLFLPSYVMRTHGSRKQQEAMRKTPPQQMQKVFEALNTLGITKWR 180
            ML+PPK W+GYDKGGYLFLPSYVMRTHGSRKQQ+A++    ++MQKVFEAL+TLG TKWR
Sbjct: 287  MLVPPKKWKGYDKGGYLFLPSYVMRTHGSRKQQDALKGVHVKKMQKVFEALDTLGSTKWR 346

Query: 181  INRKVLGVVESLWASGGNIAGLVNCEDVPLPEKPLTEDPTEIDTWKWSVRKAKKINRERH 360
            +N+KVL VVES+WASGGNIAGLV+  D+P+PEKP +ED TE   WKWSVRKA KINRERH
Sbjct: 347  VNKKVLAVVESIWASGGNIAGLVDRNDIPIPEKPSSEDSTESQEWKWSVRKANKINRERH 406

Query: 361  ALRCDIELKLSVAQKMRDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRS 540
            + RCD ELKLSVA+KM +EEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGR 
Sbjct: 407  SQRCDTELKLSVARKMENEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRP 466

Query: 541  LGESGLHWLKIHLANVYAGGVDKLSYEARVAFVENHLAEIFDSASNPIYGNRWWLTAEDP 720
            LG SGLHWLKIHLAN++AGGV+KLS++ R+AFV+NHL +IFDSA NPI GNRWWLTAEDP
Sbjct: 467  LGRSGLHWLKIHLANLFAGGVEKLSHDGRLAFVDNHLDDIFDSAENPINGNRWWLTAEDP 526

Query: 721  FQCLAACIDLSGALNSSSPHSFISNLPIHQDGSCNGLQHYAALGRDSKEAAAVNL 885
            FQCLAACI+LS +L SSSPHS +S LPIHQDGSCNGLQHYAALGRDS EAAAVNL
Sbjct: 527  FQCLAACINLSESLKSSSPHSVLSYLPIHQDGSCNGLQHYAALGRDSLEAAAVNL 581


>gb|EOY31496.1| DNA/RNA polymerases superfamily protein isoform 1 [Theobroma cacao]
          Length = 978

 Score =  509 bits (1310), Expect = e-142
 Identities = 237/295 (80%), Positives = 266/295 (90%)
 Frame = +1

Query: 1    MLIPPKNWRGYDKGGYLFLPSYVMRTHGSRKQQEAMRKTPPQQMQKVFEALNTLGITKWR 180
            ML+PPK W+GYDKGGYLFLPSYVMRTHGSRKQQ+A++    ++MQKVFEAL+TLG TKWR
Sbjct: 409  MLVPPKKWKGYDKGGYLFLPSYVMRTHGSRKQQDALKGVHVKKMQKVFEALDTLGSTKWR 468

Query: 181  INRKVLGVVESLWASGGNIAGLVNCEDVPLPEKPLTEDPTEIDTWKWSVRKAKKINRERH 360
            +N+KVL VVES+WASGGNIAGLV+  D+P+PEKP +ED TE   WKWSVRKA KINRERH
Sbjct: 469  VNKKVLAVVESIWASGGNIAGLVDRNDIPIPEKPSSEDSTESQEWKWSVRKANKINRERH 528

Query: 361  ALRCDIELKLSVAQKMRDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRS 540
            + RCD ELKLSVA+KM +EEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGR 
Sbjct: 529  SQRCDTELKLSVARKMENEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRP 588

Query: 541  LGESGLHWLKIHLANVYAGGVDKLSYEARVAFVENHLAEIFDSASNPIYGNRWWLTAEDP 720
            LG SGLHWLKIHLAN++AGGV+KLS++ R+AFV+NHL +IFDSA NPI GNRWWLTAEDP
Sbjct: 589  LGRSGLHWLKIHLANLFAGGVEKLSHDGRLAFVDNHLDDIFDSAENPINGNRWWLTAEDP 648

Query: 721  FQCLAACIDLSGALNSSSPHSFISNLPIHQDGSCNGLQHYAALGRDSKEAAAVNL 885
            FQCLAACI+LS +L SSSPHS +S LPIHQDGSCNGLQHYAALGRDS EAAAVNL
Sbjct: 649  FQCLAACINLSESLKSSSPHSVLSYLPIHQDGSCNGLQHYAALGRDSLEAAAVNL 703


>gb|EMJ04424.1| hypothetical protein PRUPE_ppa000868mg [Prunus persica]
          Length = 976

 Score =  507 bits (1305), Expect = e-141
 Identities = 238/295 (80%), Positives = 265/295 (89%)
 Frame = +1

Query: 1    MLIPPKNWRGYDKGGYLFLPSYVMRTHGSRKQQEAMRKTPPQQMQKVFEALNTLGITKWR 180
            ML+PPK W+GYDKGG+LFLPSYVMRTHGSRKQ +AMR     QMQKVFEAL+ LG TKWR
Sbjct: 407  MLVPPKRWKGYDKGGHLFLPSYVMRTHGSRKQVDAMRNISRNQMQKVFEALDMLGSTKWR 466

Query: 181  INRKVLGVVESLWASGGNIAGLVNCEDVPLPEKPLTEDPTEIDTWKWSVRKAKKINRERH 360
            +N+KVL VVES+WA GGNIAGLVN EDVP+P+K  +ED  EI  WKWSVRKAKKIN+ERH
Sbjct: 467  VNKKVLSVVESIWARGGNIAGLVNREDVPVPDKSPSEDLKEIQEWKWSVRKAKKINQERH 526

Query: 361  ALRCDIELKLSVAQKMRDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRS 540
            + RCD ELKLSVA+KM+DEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGR 
Sbjct: 527  SQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRP 586

Query: 541  LGESGLHWLKIHLANVYAGGVDKLSYEARVAFVENHLAEIFDSASNPIYGNRWWLTAEDP 720
            LG+SGL WLKIHLAN+YAGGV+KLSYE R+AFV+NH+ +IFDSA+NP+ GNRWWLTAEDP
Sbjct: 587  LGKSGLRWLKIHLANLYAGGVEKLSYEGRLAFVDNHIDDIFDSATNPVNGNRWWLTAEDP 646

Query: 721  FQCLAACIDLSGALNSSSPHSFISNLPIHQDGSCNGLQHYAALGRDSKEAAAVNL 885
             QCLAACI+LS ALNS SPH+ IS+LPIHQDGSCNGLQHYAALGRDS EAAAVNL
Sbjct: 647  LQCLAACINLSEALNSPSPHTVISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNL 701


>ref|XP_004287148.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
            [Fragaria vesca subsp. vesca]
          Length = 973

 Score =  505 bits (1300), Expect = e-140
 Identities = 232/295 (78%), Positives = 267/295 (90%)
 Frame = +1

Query: 1    MLIPPKNWRGYDKGGYLFLPSYVMRTHGSRKQQEAMRKTPPQQMQKVFEALNTLGITKWR 180
            ML+PPK W+GYDKGG+LFLPSYVMRTHGSRKQ + MR    +QMQKVFEAL+ LG TKWR
Sbjct: 404  MLVPPKRWKGYDKGGHLFLPSYVMRTHGSRKQVDTMRNISGRQMQKVFEALDMLGSTKWR 463

Query: 181  INRKVLGVVESLWASGGNIAGLVNCEDVPLPEKPLTEDPTEIDTWKWSVRKAKKINRERH 360
            IN+KVL VVES+WA GGNIAGLV+ EDVP+PEKP +EDPTEI  W+WS RKAKK+N+ERH
Sbjct: 464  INKKVLNVVESIWARGGNIAGLVDREDVPVPEKPPSEDPTEIQEWRWSARKAKKLNQERH 523

Query: 361  ALRCDIELKLSVAQKMRDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRS 540
            + RCD ELKLSVA++M+DE+GFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGR 
Sbjct: 524  SQRCDTELKLSVARRMKDEDGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRP 583

Query: 541  LGESGLHWLKIHLANVYAGGVDKLSYEARVAFVENHLAEIFDSASNPIYGNRWWLTAEDP 720
            LG+SGL WLKIHLAN+Y+GGV+KLSY+ R++FV+NH+ +IFDSA+NP+ GNRWWLTAEDP
Sbjct: 584  LGKSGLRWLKIHLANLYSGGVEKLSYDGRISFVDNHIDDIFDSATNPVNGNRWWLTAEDP 643

Query: 721  FQCLAACIDLSGALNSSSPHSFISNLPIHQDGSCNGLQHYAALGRDSKEAAAVNL 885
             QCLAACI+LS ALNS SPH+ IS+LPIHQDGSCNGLQHYAALGRD+ EAAAVNL
Sbjct: 644  LQCLAACINLSEALNSPSPHTVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNL 698


>ref|XP_006296121.1| hypothetical protein CARUB_v10025273mg [Capsella rubella]
            gi|482564829|gb|EOA29019.1| hypothetical protein
            CARUB_v10025273mg [Capsella rubella]
          Length = 991

 Score =  504 bits (1299), Expect = e-140
 Identities = 232/295 (78%), Positives = 264/295 (89%)
 Frame = +1

Query: 1    MLIPPKNWRGYDKGGYLFLPSYVMRTHGSRKQQEAMRKTPPQQMQKVFEALNTLGITKWR 180
            ML+PPK W+GYDKGGYLFLPSY+MRTHGS+KQQ+A+R    +   +VFEAL+TLG TKWR
Sbjct: 422  MLVPPKRWKGYDKGGYLFLPSYIMRTHGSKKQQDALRDISSKTAHRVFEALDTLGNTKWR 481

Query: 181  INRKVLGVVESLWASGGNIAGLVNCEDVPLPEKPLTEDPTEIDTWKWSVRKAKKINRERH 360
            +NRK+L VVE LWA GGNIAGLVN EDVP+PEKP +EDP E+ +WKWSVRKA KINRERH
Sbjct: 482  VNRKILDVVERLWADGGNIAGLVNREDVPIPEKPSSEDPEELQSWKWSVRKANKINRERH 541

Query: 361  ALRCDIELKLSVAQKMRDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRS 540
            +LRCD+ELKLSVA+KM+DEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG LEFAEGR 
Sbjct: 542  SLRCDVELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGTLEFAEGRP 601

Query: 541  LGESGLHWLKIHLANVYAGGVDKLSYEARVAFVENHLAEIFDSASNPIYGNRWWLTAEDP 720
            LG+SGLHWLKIHLAN+YAGGV+KLS++AR+AFVE HL ++ DSA NPI+G RWWL AEDP
Sbjct: 602  LGKSGLHWLKIHLANLYAGGVEKLSHDARLAFVETHLDDVMDSAENPIHGKRWWLKAEDP 661

Query: 721  FQCLAACIDLSGALNSSSPHSFISNLPIHQDGSCNGLQHYAALGRDSKEAAAVNL 885
            FQCLAAC+ L+ AL S SP+S IS+LPIHQDGSCNGLQHYAALGRDS EAAAVNL
Sbjct: 662  FQCLAACVILTQALKSPSPYSVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNL 716


>ref|XP_002880548.1| PDE319/SCA3 [Arabidopsis lyrata subsp. lyrata]
            gi|297326387|gb|EFH56807.1| PDE319/SCA3 [Arabidopsis
            lyrata subsp. lyrata]
          Length = 990

 Score =  504 bits (1298), Expect = e-140
 Identities = 233/295 (78%), Positives = 264/295 (89%)
 Frame = +1

Query: 1    MLIPPKNWRGYDKGGYLFLPSYVMRTHGSRKQQEAMRKTPPQQMQKVFEALNTLGITKWR 180
            ML+PPK W+GYDKGGYLFLPSY+MRTHGS+KQQ+A+R    +   +VFEAL+TLG TKWR
Sbjct: 421  MLVPPKRWKGYDKGGYLFLPSYIMRTHGSKKQQDALRDISHKTAHRVFEALDTLGNTKWR 480

Query: 181  INRKVLGVVESLWASGGNIAGLVNCEDVPLPEKPLTEDPTEIDTWKWSVRKAKKINRERH 360
            +NR +L VVE LWA GGNIAGLVN EDVP+PEKP +EDP EI +WKWSVRKA KINRERH
Sbjct: 481  VNRNILDVVERLWADGGNIAGLVNREDVPIPEKPSSEDPEEIQSWKWSVRKANKINRERH 540

Query: 361  ALRCDIELKLSVAQKMRDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRS 540
            +LRCD+ELKLSVA+KM+DEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG LEFAEGR 
Sbjct: 541  SLRCDVELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGTLEFAEGRP 600

Query: 541  LGESGLHWLKIHLANVYAGGVDKLSYEARVAFVENHLAEIFDSASNPIYGNRWWLTAEDP 720
            LG+SGLHWLKIHLAN++AGGV+KLS++AR+AFVENHL +I DSA NPI+G RWWL AEDP
Sbjct: 601  LGKSGLHWLKIHLANLFAGGVEKLSHDARLAFVENHLDDIMDSAENPIHGKRWWLKAEDP 660

Query: 721  FQCLAACIDLSGALNSSSPHSFISNLPIHQDGSCNGLQHYAALGRDSKEAAAVNL 885
            FQCLAAC+ L+ AL S SP+S IS+LPIHQDGSCNGLQHYAALGRDS EAAAVNL
Sbjct: 661  FQCLAACVILTQALRSPSPYSVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNL 715


>ref|XP_006404912.1| hypothetical protein EUTSA_v10000030mg [Eutrema salsugineum]
            gi|557106040|gb|ESQ46365.1| hypothetical protein
            EUTSA_v10000030mg [Eutrema salsugineum]
          Length = 993

 Score =  503 bits (1296), Expect = e-140
 Identities = 233/295 (78%), Positives = 263/295 (89%)
 Frame = +1

Query: 1    MLIPPKNWRGYDKGGYLFLPSYVMRTHGSRKQQEAMRKTPPQQMQKVFEALNTLGITKWR 180
            ML+PPK W+GYDKGGYLFLPSY+MRTHGS+KQQ+A+R    +   +VFEAL+TLG TKWR
Sbjct: 424  MLVPPKRWKGYDKGGYLFLPSYIMRTHGSKKQQDALRDISSKTAHRVFEALDTLGNTKWR 483

Query: 181  INRKVLGVVESLWASGGNIAGLVNCEDVPLPEKPLTEDPTEIDTWKWSVRKAKKINRERH 360
            +NRK+L VVE LWA GGNIAGLVN EDVP+PEKP +EDP EI +WKWSVRKA KINRERH
Sbjct: 484  VNRKILDVVERLWADGGNIAGLVNREDVPIPEKPSSEDPEEIQSWKWSVRKANKINRERH 543

Query: 361  ALRCDIELKLSVAQKMRDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRS 540
            +LRCD+ELKLSVA+KM+DEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG LEFAEGR 
Sbjct: 544  SLRCDVELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGTLEFAEGRP 603

Query: 541  LGESGLHWLKIHLANVYAGGVDKLSYEARVAFVENHLAEIFDSASNPIYGNRWWLTAEDP 720
            LG+SGL+WLKIHLAN+YAGGV+KLS++ R+AFVENHL  I DSA NPI+G RWWL AEDP
Sbjct: 604  LGKSGLYWLKIHLANLYAGGVEKLSHDGRLAFVENHLDNIMDSAENPIHGQRWWLKAEDP 663

Query: 721  FQCLAACIDLSGALNSSSPHSFISNLPIHQDGSCNGLQHYAALGRDSKEAAAVNL 885
            FQCLAAC+ L+ AL S SP+S IS+LPIHQDGSCNGLQHYAALGRDS EAAAVNL
Sbjct: 664  FQCLAACVILTQALKSPSPYSVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNL 718


>ref|XP_006474044.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Citrus
            sinensis]
          Length = 1009

 Score =  503 bits (1295), Expect = e-140
 Identities = 233/295 (78%), Positives = 268/295 (90%)
 Frame = +1

Query: 1    MLIPPKNWRGYDKGGYLFLPSYVMRTHGSRKQQEAMRKTPPQQMQKVFEALNTLGITKWR 180
            ML+PPK W+GY+KGGYLFLPSYVMRTHGSRKQQEA++      M+KVFEAL+TLG TKWR
Sbjct: 440  MLVPPKKWKGYNKGGYLFLPSYVMRTHGSRKQQEALKSVTGNCMKKVFEALDTLGSTKWR 499

Query: 181  INRKVLGVVESLWASGGNIAGLVNCEDVPLPEKPLTEDPTEIDTWKWSVRKAKKINRERH 360
            +N++VL V+ES+W SGGNIAGLV+  DVP+PEKPL+ED TE+  WKWSVRKAKKIN+ERH
Sbjct: 500  VNKQVLSVLESIWVSGGNIAGLVDRNDVPIPEKPLSEDMTEVQKWKWSVRKAKKINQERH 559

Query: 361  ALRCDIELKLSVAQKMRDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRS 540
            + RCD ELKLSVA++M+DEEGFYYPHNLDFRGRAYPMHPHLNHLSSD+CRGVLEFAEGR 
Sbjct: 560  SQRCDTELKLSVARRMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDVCRGVLEFAEGRP 619

Query: 541  LGESGLHWLKIHLANVYAGGVDKLSYEARVAFVENHLAEIFDSASNPIYGNRWWLTAEDP 720
            LG+SGL WLKIHLAN+++GGV+KLS++ R+AFVENHL EIFDSA NPI G+RWWLTAEDP
Sbjct: 620  LGKSGLRWLKIHLANLFSGGVEKLSHDGRLAFVENHLYEIFDSAENPINGSRWWLTAEDP 679

Query: 721  FQCLAACIDLSGALNSSSPHSFISNLPIHQDGSCNGLQHYAALGRDSKEAAAVNL 885
            FQCLAACI+LS AL SSSPHS IS+LPIHQDGSCNGLQHYAALGR++ EAAAVNL
Sbjct: 680  FQCLAACINLSEALKSSSPHSVISHLPIHQDGSCNGLQHYAALGRNTLEAAAVNL 734


>ref|XP_002325119.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
            gi|222866553|gb|EEF03684.1| DNA-directed RNA polymerase
            family protein [Populus trichocarpa]
          Length = 882

 Score =  503 bits (1295), Expect = e-140
 Identities = 232/295 (78%), Positives = 267/295 (90%)
 Frame = +1

Query: 1    MLIPPKNWRGYDKGGYLFLPSYVMRTHGSRKQQEAMRKTPPQQMQKVFEALNTLGITKWR 180
            ML+PPK W+GYDKGG+LFLPSYVMRTHGSR+QQ A+R  P +QMQKVFEAL+TLG TKWR
Sbjct: 313  MLVPPKKWKGYDKGGHLFLPSYVMRTHGSRQQQVAVRSVPGKQMQKVFEALDTLGNTKWR 372

Query: 181  INRKVLGVVESLWASGGNIAGLVNCEDVPLPEKPLTEDPTEIDTWKWSVRKAKKINRERH 360
            +NR++L VVE +W SGGNIAGLV+ ED+P+PEKP ++D TEI  WKWSVRKAKKIN+ERH
Sbjct: 373  VNRRLLDVVERIWTSGGNIAGLVDREDIPIPEKPSSDDLTEIQKWKWSVRKAKKINQERH 432

Query: 361  ALRCDIELKLSVAQKMRDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRS 540
            + RCD ELKLSVA+K++DEEGFYYPHNLDFRGRAYPMHPHL HLSSDLCRGVLEF EGR 
Sbjct: 433  SQRCDTELKLSVARKLKDEEGFYYPHNLDFRGRAYPMHPHLTHLSSDLCRGVLEFEEGRP 492

Query: 541  LGESGLHWLKIHLANVYAGGVDKLSYEARVAFVENHLAEIFDSASNPIYGNRWWLTAEDP 720
            LG+SGL WLKIHLAN+Y+GGV+KLS++ R+AFVENHL+EIFDSA NP+ G RWWL AEDP
Sbjct: 493  LGKSGLRWLKIHLANLYSGGVEKLSHDGRLAFVENHLSEIFDSAKNPVNGKRWWLKAEDP 552

Query: 721  FQCLAACIDLSGALNSSSPHSFISNLPIHQDGSCNGLQHYAALGRDSKEAAAVNL 885
            FQCLAACI+LS ALNS+SPH+ IS+LPIHQDGSCNGLQHYAALGRD+ EAAAVNL
Sbjct: 553  FQCLAACINLSEALNSASPHTVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNL 607


>ref|NP_973525.2| DNA-directed RNA polymerase 3 [Arabidopsis thaliana]
            gi|330252436|gb|AEC07530.1| DNA-directed RNA polymerase 3
            [Arabidopsis thaliana]
          Length = 895

 Score =  502 bits (1293), Expect = e-140
 Identities = 231/295 (78%), Positives = 263/295 (89%)
 Frame = +1

Query: 1    MLIPPKNWRGYDKGGYLFLPSYVMRTHGSRKQQEAMRKTPPQQMQKVFEALNTLGITKWR 180
            ML+PPK W+GYDKGGYLFLPSY+MRTHGS+KQQ+A++    +   +VFEAL+TLG TKWR
Sbjct: 424  MLVPPKRWKGYDKGGYLFLPSYIMRTHGSKKQQDALKDISHKTAHRVFEALDTLGNTKWR 483

Query: 181  INRKVLGVVESLWASGGNIAGLVNCEDVPLPEKPLTEDPTEIDTWKWSVRKAKKINRERH 360
            +NR +L VVE LWA GGNIAGLVN EDVP+PEKP +EDP E+ +WKWS RKA KINRERH
Sbjct: 484  VNRNILDVVERLWADGGNIAGLVNREDVPIPEKPSSEDPEELQSWKWSARKANKINRERH 543

Query: 361  ALRCDIELKLSVAQKMRDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRS 540
            +LRCD+ELKLSVA+KM+DEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG LEFAEGR 
Sbjct: 544  SLRCDVELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGTLEFAEGRP 603

Query: 541  LGESGLHWLKIHLANVYAGGVDKLSYEARVAFVENHLAEIFDSASNPIYGNRWWLTAEDP 720
            LG+SGLHWLKIHLAN+YAGGV+KLS++AR+AFVENHL +I DSA NPI+G RWWL AEDP
Sbjct: 604  LGKSGLHWLKIHLANLYAGGVEKLSHDARLAFVENHLDDIMDSAENPIHGKRWWLKAEDP 663

Query: 721  FQCLAACIDLSGALNSSSPHSFISNLPIHQDGSCNGLQHYAALGRDSKEAAAVNL 885
            FQCLAAC+ L+ AL S SP+S IS+LPIHQDGSCNGLQHYAALGRDS EAAAVNL
Sbjct: 664  FQCLAACVILTQALKSPSPYSVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNL 718


>ref|NP_179989.1| DNA-directed RNA polymerase 3 [Arabidopsis thaliana]
            gi|3914826|sp|O24600.1|RPOT3_ARATH RecName:
            Full=DNA-directed RNA polymerase 3, chloroplastic; Flags:
            Precursor gi|2330560|emb|CAA69972.1| chloroplast
            single-subunit DNA-dependent RNA polymerase [Arabidopsis
            thaliana] gi|2330564|emb|CAA69717.1| chloroplast
            single-subunit DNA-dependent RNA polymerase [Arabidopsis
            thaliana] gi|4115372|gb|AAD03373.1| chloroplast single
            subunit DNA-dependent RNA polymerase [Arabidopsis
            thaliana] gi|110739160|dbj|BAF01496.1| chloroplast single
            subunit DNA-dependent RNA polymerase [Arabidopsis
            thaliana] gi|330252437|gb|AEC07531.1| DNA-directed RNA
            polymerase 3 [Arabidopsis thaliana]
          Length = 993

 Score =  502 bits (1293), Expect = e-140
 Identities = 231/295 (78%), Positives = 263/295 (89%)
 Frame = +1

Query: 1    MLIPPKNWRGYDKGGYLFLPSYVMRTHGSRKQQEAMRKTPPQQMQKVFEALNTLGITKWR 180
            ML+PPK W+GYDKGGYLFLPSY+MRTHGS+KQQ+A++    +   +VFEAL+TLG TKWR
Sbjct: 424  MLVPPKRWKGYDKGGYLFLPSYIMRTHGSKKQQDALKDISHKTAHRVFEALDTLGNTKWR 483

Query: 181  INRKVLGVVESLWASGGNIAGLVNCEDVPLPEKPLTEDPTEIDTWKWSVRKAKKINRERH 360
            +NR +L VVE LWA GGNIAGLVN EDVP+PEKP +EDP E+ +WKWS RKA KINRERH
Sbjct: 484  VNRNILDVVERLWADGGNIAGLVNREDVPIPEKPSSEDPEELQSWKWSARKANKINRERH 543

Query: 361  ALRCDIELKLSVAQKMRDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRS 540
            +LRCD+ELKLSVA+KM+DEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG LEFAEGR 
Sbjct: 544  SLRCDVELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGTLEFAEGRP 603

Query: 541  LGESGLHWLKIHLANVYAGGVDKLSYEARVAFVENHLAEIFDSASNPIYGNRWWLTAEDP 720
            LG+SGLHWLKIHLAN+YAGGV+KLS++AR+AFVENHL +I DSA NPI+G RWWL AEDP
Sbjct: 604  LGKSGLHWLKIHLANLYAGGVEKLSHDARLAFVENHLDDIMDSAENPIHGKRWWLKAEDP 663

Query: 721  FQCLAACIDLSGALNSSSPHSFISNLPIHQDGSCNGLQHYAALGRDSKEAAAVNL 885
            FQCLAAC+ L+ AL S SP+S IS+LPIHQDGSCNGLQHYAALGRDS EAAAVNL
Sbjct: 664  FQCLAACVILTQALKSPSPYSVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNL 718


>ref|XP_002308414.1| hypothetical protein POPTR_0006s19490g [Populus trichocarpa]
            gi|222854390|gb|EEE91937.1| hypothetical protein
            POPTR_0006s19490g [Populus trichocarpa]
          Length = 982

 Score =  502 bits (1293), Expect = e-140
 Identities = 234/295 (79%), Positives = 267/295 (90%)
 Frame = +1

Query: 1    MLIPPKNWRGYDKGGYLFLPSYVMRTHGSRKQQEAMRKTPPQQMQKVFEALNTLGITKWR 180
            ML+PPK WRGYDKGG+LFLPSY+MRTHGSR+QQ+A+R  P +QMQKVFEAL+TLG TKWR
Sbjct: 413  MLVPPKKWRGYDKGGHLFLPSYIMRTHGSRQQQDAVRSVPGKQMQKVFEALDTLGNTKWR 472

Query: 181  INRKVLGVVESLWASGGNIAGLVNCEDVPLPEKPLTEDPTEIDTWKWSVRKAKKINRERH 360
            +N KVL VVE +WASGGN AGLVN  D+P+PEK  ++D TEI  WKWSVRKAKKIN+ERH
Sbjct: 473  VNGKVLDVVERIWASGGNNAGLVNRGDIPIPEKLSSDDLTEIQKWKWSVRKAKKINQERH 532

Query: 361  ALRCDIELKLSVAQKMRDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRS 540
            + RCD ELKLSVA+K++DEEGFYYPHNLDFRGRAYPMHPHL HLSSDLCRGVLEFAEGR 
Sbjct: 533  SQRCDTELKLSVARKLKDEEGFYYPHNLDFRGRAYPMHPHLTHLSSDLCRGVLEFAEGRP 592

Query: 541  LGESGLHWLKIHLANVYAGGVDKLSYEARVAFVENHLAEIFDSASNPIYGNRWWLTAEDP 720
            LG+SGL WLKIHLAN+Y+GGV+KLS++ R+AFVENHL+EIFDSA NP+ G RWWLTAEDP
Sbjct: 593  LGKSGLCWLKIHLANLYSGGVEKLSHDGRLAFVENHLSEIFDSAENPVNGKRWWLTAEDP 652

Query: 721  FQCLAACIDLSGALNSSSPHSFISNLPIHQDGSCNGLQHYAALGRDSKEAAAVNL 885
            FQCLAACI+LS AL S+SPH+ IS+LPIHQDGSCNGLQHYAALGRDS+EAAAVNL
Sbjct: 653  FQCLAACINLSEALKSASPHTVISHLPIHQDGSCNGLQHYAALGRDSQEAAAVNL 707


>dbj|BAE98468.1| chloroplast single subunit DNA-dependent RNA polymerase [Arabidopsis
            thaliana]
          Length = 786

 Score =  502 bits (1293), Expect = e-140
 Identities = 231/295 (78%), Positives = 263/295 (89%)
 Frame = +1

Query: 1    MLIPPKNWRGYDKGGYLFLPSYVMRTHGSRKQQEAMRKTPPQQMQKVFEALNTLGITKWR 180
            ML+PPK W+GYDKGGYLFLPSY+MRTHGS+KQQ+A++    +   +VFEAL+TLG TKWR
Sbjct: 424  MLVPPKRWKGYDKGGYLFLPSYIMRTHGSKKQQDALKDISHKTAHRVFEALDTLGNTKWR 483

Query: 181  INRKVLGVVESLWASGGNIAGLVNCEDVPLPEKPLTEDPTEIDTWKWSVRKAKKINRERH 360
            +NR +L VVE LWA GGNIAGLVN EDVP+PEKP +EDP E+ +WKWS RKA KINRERH
Sbjct: 484  VNRNILDVVERLWADGGNIAGLVNREDVPIPEKPSSEDPEELQSWKWSARKANKINRERH 543

Query: 361  ALRCDIELKLSVAQKMRDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRS 540
            +LRCD+ELKLSVA+KM+DEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG LEFAEGR 
Sbjct: 544  SLRCDVELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGTLEFAEGRP 603

Query: 541  LGESGLHWLKIHLANVYAGGVDKLSYEARVAFVENHLAEIFDSASNPIYGNRWWLTAEDP 720
            LG+SGLHWLKIHLAN+YAGGV+KLS++AR+AFVENHL +I DSA NPI+G RWWL AEDP
Sbjct: 604  LGKSGLHWLKIHLANLYAGGVEKLSHDARLAFVENHLDDIMDSAENPIHGKRWWLKAEDP 663

Query: 721  FQCLAACIDLSGALNSSSPHSFISNLPIHQDGSCNGLQHYAALGRDSKEAAAVNL 885
            FQCLAAC+ L+ AL S SP+S IS+LPIHQDGSCNGLQHYAALGRDS EAAAVNL
Sbjct: 664  FQCLAACVILTQALKSPSPYSVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNL 718


>ref|XP_006453566.1| hypothetical protein CICLE_v10007333mg [Citrus clementina]
            gi|557556792|gb|ESR66806.1| hypothetical protein
            CICLE_v10007333mg [Citrus clementina]
          Length = 1012

 Score =  498 bits (1282), Expect = e-138
 Identities = 231/295 (78%), Positives = 267/295 (90%)
 Frame = +1

Query: 1    MLIPPKNWRGYDKGGYLFLPSYVMRTHGSRKQQEAMRKTPPQQMQKVFEALNTLGITKWR 180
            ML+PPK W+GY+KGGYLFLPSYVMRTHGSRKQQEA++      M+KVFEAL+TLG TKWR
Sbjct: 443  MLVPPKKWKGYNKGGYLFLPSYVMRTHGSRKQQEALKSVTGNCMKKVFEALDTLGSTKWR 502

Query: 181  INRKVLGVVESLWASGGNIAGLVNCEDVPLPEKPLTEDPTEIDTWKWSVRKAKKINRERH 360
            +N++VL V+ES+W SGGNIAGLV+  DV +PEKPL+ED TE+  WKWSVRKAKKIN+ERH
Sbjct: 503  VNKQVLSVLESIWVSGGNIAGLVDRNDVLIPEKPLSEDMTEVQKWKWSVRKAKKINQERH 562

Query: 361  ALRCDIELKLSVAQKMRDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRS 540
            + RCD ELKLSVA++M+DEEGFYYPHNLDFRGRAYPMHPHLNHLSSD+CRGVLEFAEGR 
Sbjct: 563  SQRCDTELKLSVARRMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDVCRGVLEFAEGRP 622

Query: 541  LGESGLHWLKIHLANVYAGGVDKLSYEARVAFVENHLAEIFDSASNPIYGNRWWLTAEDP 720
            LG+SGL WLKIHLAN+++GGV+KLS++ R+AFVENHL EIFDSA NPI G+RWWLTAEDP
Sbjct: 623  LGKSGLRWLKIHLANLFSGGVEKLSHDGRLAFVENHLYEIFDSAENPINGSRWWLTAEDP 682

Query: 721  FQCLAACIDLSGALNSSSPHSFISNLPIHQDGSCNGLQHYAALGRDSKEAAAVNL 885
            FQCLAACI+L+ AL SSSPHS IS+LPIHQDGSCNGLQHYAALGR++ EAAAVNL
Sbjct: 683  FQCLAACINLAEALKSSSPHSVISHLPIHQDGSCNGLQHYAALGRNTLEAAAVNL 737


>ref|XP_003525896.1| PREDICTED: DNA-directed RNA polymerase 3B, chloroplastic-like
            [Glycine max]
          Length = 973

 Score =  496 bits (1276), Expect = e-138
 Identities = 230/295 (77%), Positives = 262/295 (88%)
 Frame = +1

Query: 1    MLIPPKNWRGYDKGGYLFLPSYVMRTHGSRKQQEAMRKTPPQQMQKVFEALNTLGITKWR 180
            MLIPPK W+GYDKGG+LFLPSY+MRTHGS+KQQ+ M+     QMQKVFEAL+ LG TKWR
Sbjct: 404  MLIPPKKWKGYDKGGHLFLPSYIMRTHGSKKQQDVMKNVDGAQMQKVFEALDILGNTKWR 463

Query: 181  INRKVLGVVESLWASGGNIAGLVNCEDVPLPEKPLTEDPTEIDTWKWSVRKAKKINRERH 360
            +NR+VLGVVES+WA GGNIAGLV+C+DVP P+KPL ED   I  WK +VRKAKKIN ERH
Sbjct: 464  VNRRVLGVVESIWAGGGNIAGLVDCKDVPKPDKPLVEDLKLIQEWKCNVRKAKKINLERH 523

Query: 361  ALRCDIELKLSVAQKMRDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRS 540
            +LRCD ELKLSVA+KM+DEEGFYYPHNLDFRGRAYPMHPHLNHL SDLCRG+LEFAEGR 
Sbjct: 524  SLRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRP 583

Query: 541  LGESGLHWLKIHLANVYAGGVDKLSYEARVAFVENHLAEIFDSASNPIYGNRWWLTAEDP 720
            LG+SGL WLKIHLAN+YAGG++K SY+ R+ F+E+H+ +IFDSA +PI GNRWWLTAEDP
Sbjct: 584  LGKSGLRWLKIHLANLYAGGIEKQSYDGRLGFIEDHIHDIFDSADHPINGNRWWLTAEDP 643

Query: 721  FQCLAACIDLSGALNSSSPHSFISNLPIHQDGSCNGLQHYAALGRDSKEAAAVNL 885
            FQCLAACI+LS AL SSSP+SFIS+LPIHQDGSCNGLQHYAALGRD  EAAAVNL
Sbjct: 644  FQCLAACINLSEALRSSSPNSFISHLPIHQDGSCNGLQHYAALGRDDLEAAAVNL 698


>sp|Q8L6J1.2|RPO3B_TOBAC RecName: Full=DNA-directed RNA polymerase 3B, chloroplastic; AltName:
            Full=NictaRpoT3-tom; AltName: Full=T7 bacteriophage-type
            single subunit RNA polymerase 3B; Flags: Precursor
            gi|21425667|emb|CAC95021.2| chloroplast RNA polymerase
            [Nicotiana tabacum]
          Length = 977

 Score =  493 bits (1268), Expect = e-137
 Identities = 225/295 (76%), Positives = 265/295 (89%)
 Frame = +1

Query: 1    MLIPPKNWRGYDKGGYLFLPSYVMRTHGSRKQQEAMRKTPPQQMQKVFEALNTLGITKWR 180
            ML+PPK WRGYDKGGYLFLPSY+MRTHGSR+QQ+A+R  P +QMQ+V+EAL+TLG TKWR
Sbjct: 408  MLVPPKKWRGYDKGGYLFLPSYLMRTHGSRRQQDAVRGVPTKQMQQVYEALDTLGSTKWR 467

Query: 181  INRKVLGVVESLWASGGNIAGLVNCEDVPLPEKPLTEDPTEIDTWKWSVRKAKKINRERH 360
            +N+++L VVES+WA GGNIAGLV+ +DVP+PE   ++D  E+  WKW VRK+KKIN+E H
Sbjct: 468  VNKRILNVVESIWAGGGNIAGLVDRKDVPIPELSNSDDIMEVKKWKWKVRKSKKINQELH 527

Query: 361  ALRCDIELKLSVAQKMRDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRS 540
            + RCD ELKLSVA+K++DEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG+LEFAEGR 
Sbjct: 528  SQRCDTELKLSVARKLKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRP 587

Query: 541  LGESGLHWLKIHLANVYAGGVDKLSYEARVAFVENHLAEIFDSASNPIYGNRWWLTAEDP 720
            LG+SGL WLKIHLA++YAGGV+KL Y+AR+AFVENH+ +I DSA+NP+ GNRWWL AEDP
Sbjct: 588  LGKSGLRWLKIHLASLYAGGVEKLCYDARLAFVENHIHDILDSANNPLNGNRWWLNAEDP 647

Query: 721  FQCLAACIDLSGALNSSSPHSFISNLPIHQDGSCNGLQHYAALGRDSKEAAAVNL 885
            FQCLAACI+LS AL SSSPH+ IS+LPIHQDGSCNGLQHYAALGRDS EAAAVNL
Sbjct: 648  FQCLAACINLSEALKSSSPHTVISHLPIHQDGSCNGLQHYAALGRDSMEAAAVNL 702