BLASTX nr result
ID: Achyranthes23_contig00027796
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Achyranthes23_contig00027796
(1012 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004247411.1| PREDICTED: U1 small nuclear ribonucleoprotei... 373 e-101
ref|XP_004156835.1| PREDICTED: U1 small nuclear ribonucleoprotei... 373 e-101
ref|XP_002270967.1| PREDICTED: U1 small nuclear ribonucleoprotei... 372 e-100
ref|NP_001274791.1| uncharacterized protein LOC102601989 [Solanu... 368 2e-99
ref|XP_004290803.1| PREDICTED: U1 small nuclear ribonucleoprotei... 362 1e-97
gb|EOX95113.1| Spliceosomal protein U1A [Theobroma cacao] 359 1e-96
emb|CBI36876.3| unnamed protein product [Vitis vinifera] 358 2e-96
gb|ACJ84781.1| unknown [Medicago truncatula] 357 5e-96
ref|XP_006397952.1| hypothetical protein EUTSA_v10001603mg [Eutr... 356 7e-96
ref|XP_006294873.1| hypothetical protein CARUB_v10023926mg [Caps... 353 8e-95
ref|XP_002302719.1| predicted protein [Populus trichocarpa] 349 9e-94
gb|AFK36658.1| unknown [Medicago truncatula] 348 1e-93
ref|XP_002523100.1| small nuclear ribonucleoprotein U)1a,U)2b, p... 348 1e-93
ref|XP_002880313.1| hypothetical protein ARALYDRAFT_483938 [Arab... 348 2e-93
ref|XP_002320337.2| SPLICEOSOMAL protein U1A [Populus trichocarp... 348 2e-93
ref|XP_004494379.1| PREDICTED: U1 small nuclear ribonucleoprotei... 347 4e-93
ref|NP_182280.1| spliceosomal protein U1A [Arabidopsis thaliana]... 346 7e-93
ref|XP_003554737.1| PREDICTED: U1 small nuclear ribonucleoprotei... 341 2e-91
ref|XP_006444378.1| hypothetical protein CICLE_v10021907mg [Citr... 340 5e-91
gb|ESW19238.1| hypothetical protein PHAVU_006G108000g [Phaseolus... 340 7e-91
>ref|XP_004247411.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Solanum
lycopersicum]
Length = 253
Score = 373 bits (958), Expect = e-101
Identities = 191/247 (77%), Positives = 213/247 (86%), Gaps = 10/247 (4%)
Frame = +3
Query: 33 TNP-----GGDVPPNQTIYINNLNEKIKLDELKKSLNAVFSQFGKILEVLAFKTLKHKGQ 197
TNP GG+VPPN TIYINNLNEKIKL+ELKKS++AVFSQFGKILEVLAFKTLKHKGQ
Sbjct: 8 TNPNPAPSGGEVPPNVTIYINNLNEKIKLEELKKSMHAVFSQFGKILEVLAFKTLKHKGQ 67
Query: 198 AWVVFDEVSSATNALRQMQGFPFYDKPLRIQYAKTKSDVIAKADGTFVPREKRKKHEERA 377
AWVVFDEVSSA+NALRQMQGFPFYDKP+RIQYAKTKSDV+AKADGTFVPREKRK+HE++
Sbjct: 68 AWVVFDEVSSASNALRQMQGFPFYDKPMRIQYAKTKSDVVAKADGTFVPREKRKRHEDK- 126
Query: 378 GKKRKEQHDATQP-VGMN--YPGTFGVAPPLSQIPYMG--KPVAPEVPAAPNSILFVQNL 542
G+K+K+Q DA Q +G N Y G +G APP SQIPYMG K PE PA PNSILFVQNL
Sbjct: 127 GRKKKDQQDANQAGMGRNPAYAGAYGAAPPFSQIPYMGGAKAAVPEAPAPPNSILFVQNL 186
Query: 543 PHETNTLMLSVLFRQYPGFKEVRMVEAKPGIAFVEYENEVQSTVAMNALQGFKIIGDNAM 722
PH++ +ML +LF QYPGFKEVRMVEAKPGIAF+EY +E+QSTVAM ALQGFKI DN M
Sbjct: 187 PHQSTPMMLQMLFCQYPGFKEVRMVEAKPGIAFIEYGDEMQSTVAMQALQGFKITADNPM 246
Query: 723 LITYAKK 743
LITYAKK
Sbjct: 247 LITYAKK 253
>ref|XP_004156835.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Cucumis
sativus]
Length = 242
Score = 373 bits (957), Expect = e-101
Identities = 191/244 (78%), Positives = 213/244 (87%), Gaps = 3/244 (1%)
Frame = +3
Query: 21 MAEVTNPGGDVPPNQTIYINNLNEKIKLDELKKSLNAVFSQFGKILEVLAFKTLKHKGQA 200
MAEVT G +VPPN TIYINNLNEKIKL+ELKKSLNAVFSQFGKILEVLAFKTLKHKGQA
Sbjct: 1 MAEVTTTGNEVPPNMTIYINNLNEKIKLEELKKSLNAVFSQFGKILEVLAFKTLKHKGQA 60
Query: 201 WVVFDEVSSATNALRQMQGFPFYDKPLRIQYAKTKSDVIAKADGTFVPREKRKKHEERAG 380
WVVF+EVSSATNALRQMQGFPFYDKP+RIQYAKTKSD+IAK+DG+FVPREKRK+HEE+ G
Sbjct: 61 WVVFEEVSSATNALRQMQGFPFYDKPMRIQYAKTKSDIIAKSDGSFVPREKRKRHEEK-G 119
Query: 381 KKRKEQHDATQP-VGMN--YPGTFGVAPPLSQIPYMGKPVAPEVPAAPNSILFVQNLPHE 551
+K+KEQHDA Q +G+N + G +G A SQ+PY G + PE PA PNSILFVQNLPHE
Sbjct: 120 RKKKEQHDANQAGMGLNPAFAGAYG-ATAHSQVPYSGGVMVPEAPAPPNSILFVQNLPHE 178
Query: 552 TNTLMLSVLFRQYPGFKEVRMVEAKPGIAFVEYENEVQSTVAMNALQGFKIIGDNAMLIT 731
T +ML +LF QYPGFKEVRMVEAKPGIAFVEY +EVQSTVAM ALQGFK+ N+MLIT
Sbjct: 179 TTPMMLQMLFCQYPGFKEVRMVEAKPGIAFVEYSDEVQSTVAMQALQGFKMNPQNSMLIT 238
Query: 732 YAKK 743
YAKK
Sbjct: 239 YAKK 242
>ref|XP_002270967.1| PREDICTED: U1 small nuclear ribonucleoprotein A [Vitis vinifera]
Length = 245
Score = 372 bits (955), Expect = e-100
Identities = 189/246 (76%), Positives = 212/246 (86%), Gaps = 5/246 (2%)
Frame = +3
Query: 21 MAEVTNPGGDVPPNQTIYINNLNEKIKLDELKKSLNAVFSQFGKILEVLAFKTLKHKGQA 200
MAE+ N GG++ PN TIYINNLNEKIKL+ELKKSL AVFSQFGKI+EVLAFKTLKHKGQA
Sbjct: 1 MAEL-NTGGEISPNMTIYINNLNEKIKLEELKKSLFAVFSQFGKIMEVLAFKTLKHKGQA 59
Query: 201 WVVFDEVSSATNALRQMQGFPFYDKPLRIQYAKTKSDVIAKADGTFVPREKRKKHEERAG 380
WVVF+EVSSATNALRQMQGFPFYDKP+RIQYAKTKSDVIAKADGTFVPRE+R++H++RAG
Sbjct: 60 WVVFEEVSSATNALRQMQGFPFYDKPMRIQYAKTKSDVIAKADGTFVPRERRRRHDDRAG 119
Query: 381 KKRKEQHDATQP-VGMN--YPGTFGVAPPLSQIPYMG--KPVAPEVPAAPNSILFVQNLP 545
+KR+EQHDA Q VG+N Y G +G APPLSQIPY+G K PE PA PN+ILF+QNLP
Sbjct: 120 RKRREQHDANQAGVGVNPAYGGAYGAAPPLSQIPYLGGAKSAVPEAPAPPNNILFIQNLP 179
Query: 546 HETNTLMLSVLFRQYPGFKEVRMVEAKPGIAFVEYENEVQSTVAMNALQGFKIIGDNAML 725
HE +ML + F QYPGFKEVRMVEAKPGIAFVEY +E+QSTVAM LQG KI N ML
Sbjct: 180 HEATPMMLQMFFCQYPGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQGLQGLKINQQNPML 239
Query: 726 ITYAKK 743
ITYAKK
Sbjct: 240 ITYAKK 245
>ref|NP_001274791.1| uncharacterized protein LOC102601989 [Solanum tuberosum]
gi|1050840|emb|CAA90282.1| U1snRNP-specific protein, U1A
[Solanum tuberosum]
Length = 253
Score = 368 bits (945), Expect = 2e-99
Identities = 186/247 (75%), Positives = 213/247 (86%), Gaps = 10/247 (4%)
Frame = +3
Query: 33 TNP-----GGDVPPNQTIYINNLNEKIKLDELKKSLNAVFSQFGKILEVLAFKTLKHKGQ 197
TNP GG+ PPN TIYINNLNEKIKL+ELKKS++AVFSQFGKILEVLAFKTLKHKGQ
Sbjct: 8 TNPNPAPSGGETPPNVTIYINNLNEKIKLEELKKSMHAVFSQFGKILEVLAFKTLKHKGQ 67
Query: 198 AWVVFDEVSSATNALRQMQGFPFYDKPLRIQYAKTKSDVIAKADGTFVPREKRKKHEERA 377
AWVVF+EVSSA+NALRQMQGFPFYDKP+RIQYAKTKSDV+AKADGTFVPREKRK+HE++
Sbjct: 68 AWVVFEEVSSASNALRQMQGFPFYDKPMRIQYAKTKSDVVAKADGTFVPREKRKRHEDK- 126
Query: 378 GKKRKEQHDATQP-VGMN--YPGTFGVAPPLSQIPYMG--KPVAPEVPAAPNSILFVQNL 542
G+K+K+Q D+ Q +G+N Y G +G APP SQIPYMG K PE PA PNSILFVQNL
Sbjct: 127 GRKKKDQQDSNQAGMGLNPAYAGAYGAAPPFSQIPYMGGAKAAVPEAPAPPNSILFVQNL 186
Query: 543 PHETNTLMLSVLFRQYPGFKEVRMVEAKPGIAFVEYENEVQSTVAMNALQGFKIIGDNAM 722
PH++ +ML +LF QYPGFKEVRM+EAKPGIAF+EY +E+QSTVAM ALQGFKI +N M
Sbjct: 187 PHQSTPMMLQMLFCQYPGFKEVRMIEAKPGIAFIEYGDEMQSTVAMQALQGFKITAENPM 246
Query: 723 LITYAKK 743
LITYAKK
Sbjct: 247 LITYAKK 253
>ref|XP_004290803.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Fragaria
vesca subsp. vesca]
Length = 244
Score = 362 bits (930), Expect = 1e-97
Identities = 181/241 (75%), Positives = 207/241 (85%), Gaps = 5/241 (2%)
Frame = +3
Query: 36 NPGGDVPPNQTIYINNLNEKIKLDELKKSLNAVFSQFGKILEVLAFKTLKHKGQAWVVFD 215
N G +VP NQTIYINNLNEKIKLDELKK+L+A+FSQFGK+L+VLAFKTLKHKGQAWVVF+
Sbjct: 5 NSGSEVPANQTIYINNLNEKIKLDELKKTLHAMFSQFGKVLDVLAFKTLKHKGQAWVVFE 64
Query: 216 EVSSATNALRQMQGFPFYDKPLRIQYAKTKSDVIAKADGTFVPREKRKKHEERAGKKRKE 395
+VSSATNA+RQMQ FPFYDKP++IQYAKTKSD+IAKADGTFVPRE+RK+HEE+ G+KRKE
Sbjct: 65 DVSSATNAIRQMQSFPFYDKPMKIQYAKTKSDIIAKADGTFVPRERRKRHEEK-GRKRKE 123
Query: 396 QHDATQP---VGMNYPGTFGVAPPLSQIPYMG--KPVAPEVPAAPNSILFVQNLPHETNT 560
Q DA Q + YPG +G APPLSQIPY G K + PE PA PN+ILFVQNLPHE +
Sbjct: 124 QQDANQAGMVLNPAYPGAYGGAPPLSQIPYPGGVKSMVPEAPAPPNNILFVQNLPHEATS 183
Query: 561 LMLSVLFRQYPGFKEVRMVEAKPGIAFVEYENEVQSTVAMNALQGFKIIGDNAMLITYAK 740
ML +LF QYPGFKEVRMVEAKPGIAFVEYENE+QST+AM LQ FK+ N+MLITYAK
Sbjct: 184 AMLQMLFCQYPGFKEVRMVEAKPGIAFVEYENEMQSTMAMQNLQAFKVTPQNSMLITYAK 243
Query: 741 K 743
K
Sbjct: 244 K 244
>gb|EOX95113.1| Spliceosomal protein U1A [Theobroma cacao]
Length = 260
Score = 359 bits (921), Expect = 1e-96
Identities = 185/262 (70%), Positives = 213/262 (81%), Gaps = 21/262 (8%)
Frame = +3
Query: 21 MAEVTNPGGDVPPNQTIYINNLNEKIKLDELKKSLNAVFSQFGKILEVLAFKTLKHKGQA 200
MAE++ G +VPPN T+YINNLNEKIK+D+LKKSL+AVFSQFGKIL+VLAFKTLKHKGQA
Sbjct: 1 MAEISQ-GEEVPPNMTLYINNLNEKIKIDQLKKSLHAVFSQFGKILDVLAFKTLKHKGQA 59
Query: 201 WVVFDEVSSATNALRQMQGFPFYDKPLRIQYAKTKSDVIAKADGTFVPREKRKKHEERAG 380
WV+F+ V+SATNALR+MQGFPFYDK +RIQYAKTKSD+IAKADGTFVPREKRK+HE++ G
Sbjct: 60 WVIFEGVNSATNALRRMQGFPFYDKEMRIQYAKTKSDIIAKADGTFVPREKRKRHEDKGG 119
Query: 381 KKRKEQHDATQ-PVGMN--YPGTFGVAPP-----------------LSQIPYMG-KPVAP 497
KKRKEQ D Q G+N YPG +G PP LSQIPY+G +P+ P
Sbjct: 120 KKRKEQLDPNQAAAGLNPAYPGAYGATPPLTLLNLATVSSVQIAQKLSQIPYLGARPIVP 179
Query: 498 EVPAAPNSILFVQNLPHETNTLMLSVLFRQYPGFKEVRMVEAKPGIAFVEYENEVQSTVA 677
E PA PN+ILFVQNLPH+T T+ML +LF QYPG K+VRMVE KPGIAFVEYENE+QSTVA
Sbjct: 180 EAPAPPNNILFVQNLPHDTTTMMLQMLFNQYPGLKDVRMVETKPGIAFVEYENEMQSTVA 239
Query: 678 MNALQGFKIIGDNAMLITYAKK 743
M ALQGFK I N MLITYAKK
Sbjct: 240 MQALQGFK-IQQNQMLITYAKK 260
>emb|CBI36876.3| unnamed protein product [Vitis vinifera]
Length = 232
Score = 358 bits (918), Expect = 2e-96
Identities = 181/231 (78%), Positives = 201/231 (87%), Gaps = 5/231 (2%)
Frame = +3
Query: 66 TIYINNLNEKIKLDELKKSLNAVFSQFGKILEVLAFKTLKHKGQAWVVFDEVSSATNALR 245
TIYINNLNEKIKL+ELKKSL AVFSQFGKI+EVLAFKTLKHKGQAWVVF+EVSSATNALR
Sbjct: 2 TIYINNLNEKIKLEELKKSLFAVFSQFGKIMEVLAFKTLKHKGQAWVVFEEVSSATNALR 61
Query: 246 QMQGFPFYDKPLRIQYAKTKSDVIAKADGTFVPREKRKKHEERAGKKRKEQHDATQP-VG 422
QMQGFPFYDKP+RIQYAKTKSDVIAKADGTFVPRE+R++H++RAG+KR+EQHDA Q VG
Sbjct: 62 QMQGFPFYDKPMRIQYAKTKSDVIAKADGTFVPRERRRRHDDRAGRKRREQHDANQAGVG 121
Query: 423 MN--YPGTFGVAPPLSQIPYMG--KPVAPEVPAAPNSILFVQNLPHETNTLMLSVLFRQY 590
+N Y G +G APPLSQIPY+G K PE PA PN+ILF+QNLPHE +ML + F QY
Sbjct: 122 VNPAYGGAYGAAPPLSQIPYLGGAKSAVPEAPAPPNNILFIQNLPHEATPMMLQMFFCQY 181
Query: 591 PGFKEVRMVEAKPGIAFVEYENEVQSTVAMNALQGFKIIGDNAMLITYAKK 743
PGFKEVRMVEAKPGIAFVEY +E+QSTVAM LQG KI N MLITYAKK
Sbjct: 182 PGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQGLQGLKINQQNPMLITYAKK 232
>gb|ACJ84781.1| unknown [Medicago truncatula]
Length = 245
Score = 357 bits (915), Expect = 5e-96
Identities = 182/246 (73%), Positives = 210/246 (85%), Gaps = 5/246 (2%)
Frame = +3
Query: 21 MAEVTNPGGDVPPNQTIYINNLNEKIKLDELKKSLNAVFSQFGKILEVLAFKTLKHKGQA 200
MAEV N + P N TIYINNLNEKIK+DELKKSL+AVFSQFGKILEVLAFKTLKHKGQA
Sbjct: 1 MAEV-NANPEPPQNMTIYINNLNEKIKIDELKKSLHAVFSQFGKILEVLAFKTLKHKGQA 59
Query: 201 WVVFDEVSSATNALRQMQGFPFYDKPLRIQYAKTKSDVIAKADGTFVPREKRKKHEERAG 380
WV+F++V+SA+NALRQMQGFPFYDKP+RIQYA+TKSDVIAKA+GTFVPREKRK+H+++AG
Sbjct: 60 WVIFEDVTSASNALRQMQGFPFYDKPMRIQYARTKSDVIAKAEGTFVPREKRKRHDDKAG 119
Query: 381 KKRKEQHDAT-QPVGMN--YPGTFGVAPPLSQIPYMG--KPVAPEVPAAPNSILFVQNLP 545
KKRK+Q+DA G+N Y G +G P LSQIPY G K + PE PA PN+ILF+QNLP
Sbjct: 120 KKRKDQNDANLAGTGLNPAYAGAYGATPALSQIPYPGGAKSLLPEAPAPPNNILFIQNLP 179
Query: 546 HETNTLMLSVLFRQYPGFKEVRMVEAKPGIAFVEYENEVQSTVAMNALQGFKIIGDNAML 725
+ET +ML +LF QYPGFKEVRMVEAKPGIAFVEY +E+QST+AM ALQGFKI N ML
Sbjct: 180 NETTPMMLQMLFLQYPGFKEVRMVEAKPGIAFVEYGDEMQSTMAMQALQGFKIAPQNPML 239
Query: 726 ITYAKK 743
ITYAKK
Sbjct: 240 ITYAKK 245
>ref|XP_006397952.1| hypothetical protein EUTSA_v10001603mg [Eutrema salsugineum]
gi|557099025|gb|ESQ39405.1| hypothetical protein
EUTSA_v10001603mg [Eutrema salsugineum]
Length = 247
Score = 356 bits (914), Expect = 7e-96
Identities = 178/242 (73%), Positives = 204/242 (84%), Gaps = 6/242 (2%)
Frame = +3
Query: 36 NPGGDVPPNQTIYINNLNEKIKLDELKKSLNAVFSQFGKILEVLAFKTLKHKGQAWVVFD 215
N G +V PNQTIYINNLNEK+KLDELKKSLNAVFSQFGKILEVLAFKTLKHKGQAWVVF+
Sbjct: 7 NQGSEVSPNQTIYINNLNEKVKLDELKKSLNAVFSQFGKILEVLAFKTLKHKGQAWVVFE 66
Query: 216 EVSSATNALRQMQGFPFYDKPLRIQYAKTKSDVIAKADGTFVPREKRKKHEERAGKKRKE 395
SA+ A+ +M GFPFYDKP+RIQ+AKTKSDV+AKADGTFVPREKRK+HEE+ GKK+KE
Sbjct: 67 SAESASTAIAKMNGFPFYDKPMRIQFAKTKSDVVAKADGTFVPREKRKRHEEKGGKKKKE 126
Query: 396 Q-HDATQ---PVGMNYPGTFGVAPPLSQIPYMG--KPVAPEVPAAPNSILFVQNLPHETN 557
Q HD+TQ + YPG +G APPLSQ+PY G KP+ PE PA PN+ILFVQNLPH+T
Sbjct: 127 QHHDSTQMGNAMNSAYPGVYGAAPPLSQVPYPGGVKPILPEAPAPPNNILFVQNLPHDTT 186
Query: 558 TLMLSVLFRQYPGFKEVRMVEAKPGIAFVEYENEVQSTVAMNALQGFKIIGDNAMLITYA 737
+ + +LF QY GFKEVRMVEAKPGIAFVE+ +E+QSTVAM LQGFKI+ N MLITYA
Sbjct: 187 PMTVQMLFYQYQGFKEVRMVEAKPGIAFVEFADEMQSTVAMQGLQGFKIL-QNPMLITYA 245
Query: 738 KK 743
KK
Sbjct: 246 KK 247
>ref|XP_006294873.1| hypothetical protein CARUB_v10023926mg [Capsella rubella]
gi|482563581|gb|EOA27771.1| hypothetical protein
CARUB_v10023926mg [Capsella rubella]
Length = 247
Score = 353 bits (905), Expect = 8e-95
Identities = 178/242 (73%), Positives = 201/242 (83%), Gaps = 6/242 (2%)
Frame = +3
Query: 36 NPGGDVPPNQTIYINNLNEKIKLDELKKSLNAVFSQFGKILEVLAFKTLKHKGQAWVVFD 215
N G +V PNQTIYINNLNEK+KLDELKKSLNAVFSQFGKILEVLAFKTLKHKGQAWVVFD
Sbjct: 7 NQGSEVSPNQTIYINNLNEKVKLDELKKSLNAVFSQFGKILEVLAFKTLKHKGQAWVVFD 66
Query: 216 EVSSATNALRQMQGFPFYDKPLRIQYAKTKSDVIAKADGTFVPREKRKKHEERAGKKRKE 395
SA+ A+ +M FPFYDK +RIQYAKTKSDV+AKADGTFVPREKRK+ EE+ GKK+K+
Sbjct: 67 NADSASTAIAKMNDFPFYDKRMRIQYAKTKSDVVAKADGTFVPREKRKRQEEKGGKKKKD 126
Query: 396 QHDATQPVGM----NYPGTFGVAPPLSQIPYMG--KPVAPEVPAAPNSILFVQNLPHETN 557
QH + +GM YPG +G APPLSQ+PY G KP+ PE PA PN+ILFVQNLPHET
Sbjct: 127 QHHDSTQMGMAMNSAYPGVYGTAPPLSQVPYPGGVKPILPEAPAPPNNILFVQNLPHETT 186
Query: 558 TLMLSVLFRQYPGFKEVRMVEAKPGIAFVEYENEVQSTVAMNALQGFKIIGDNAMLITYA 737
++L +LF QY GFKEVRMVEAKPGIAFVE+ +E+QSTVAM ALQGFK I N MLITYA
Sbjct: 187 PMVLQMLFCQYQGFKEVRMVEAKPGIAFVEFADEMQSTVAMQALQGFK-IQQNQMLITYA 245
Query: 738 KK 743
KK
Sbjct: 246 KK 247
>ref|XP_002302719.1| predicted protein [Populus trichocarpa]
Length = 251
Score = 349 bits (896), Expect = 9e-94
Identities = 179/253 (70%), Positives = 212/253 (83%), Gaps = 12/253 (4%)
Frame = +3
Query: 21 MAEVTN-------PGGDVPPNQTIYINNLNEKIKLDELKKSLNAVFSQFGKILEVLAFKT 179
MA+V N G +V N TIYINNLNEKIK+DELKK+L+AVFSQFGKILE+LAFKT
Sbjct: 1 MADVNNNINNNSSTGTEVSSNMTIYINNLNEKIKIDELKKALHAVFSQFGKILEILAFKT 60
Query: 180 LKHKGQAWVVFDEVSSATNALRQMQGFPFYDKPLRIQYAKTKSDVIAKADGTFVPREKRK 359
LKHKGQAWVVF++V SA+NA+RQMQ FPFYDKP+RIQYAKTKSD++AKADGTFVPREKR+
Sbjct: 61 LKHKGQAWVVFEDVQSASNAMRQMQSFPFYDKPMRIQYAKTKSDIVAKADGTFVPREKRR 120
Query: 360 KHEERAGKKRKEQHDATQ-PVGMN--YPGTFGVAPPLSQIPYMG--KPVAPEVPAAPNSI 524
+HEE+ GKK+K+QHD Q VG+ Y G +G PPLSQIPY+G K + PE PA PN+I
Sbjct: 121 RHEEK-GKKKKDQHDTNQVGVGLTPAYGGAYGTTPPLSQIPYLGGVKSMVPEAPAPPNNI 179
Query: 525 LFVQNLPHETNTLMLSVLFRQYPGFKEVRMVEAKPGIAFVEYENEVQSTVAMNALQGFKI 704
LF+QNLP+ET T+ML +LF+QY GFKEVRMVE KPGIAFVEY +E+QSTVAM+ALQGFK
Sbjct: 180 LFIQNLPNETTTMMLQMLFQQYAGFKEVRMVETKPGIAFVEYGDEMQSTVAMHALQGFK- 238
Query: 705 IGDNAMLITYAKK 743
+ N+MLITYAKK
Sbjct: 239 LQQNSMLITYAKK 251
>gb|AFK36658.1| unknown [Medicago truncatula]
Length = 232
Score = 348 bits (894), Expect = 1e-93
Identities = 175/231 (75%), Positives = 202/231 (87%), Gaps = 5/231 (2%)
Frame = +3
Query: 66 TIYINNLNEKIKLDELKKSLNAVFSQFGKILEVLAFKTLKHKGQAWVVFDEVSSATNALR 245
TIYINNLNEKIK+DELKKSL+AVFSQFGKILEVLAFKTLKHKGQAWV+F++V+SA+NALR
Sbjct: 2 TIYINNLNEKIKIDELKKSLHAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVTSASNALR 61
Query: 246 QMQGFPFYDKPLRIQYAKTKSDVIAKADGTFVPREKRKKHEERAGKKRKEQHDAT-QPVG 422
QMQGFPFYDKP+RIQYA+TKSDVIAKA+GTFVPREKRK+H+++AGKKRK+Q+DA G
Sbjct: 62 QMQGFPFYDKPMRIQYARTKSDVIAKAEGTFVPREKRKRHDDKAGKKRKDQNDANLAGTG 121
Query: 423 MN--YPGTFGVAPPLSQIPYMG--KPVAPEVPAAPNSILFVQNLPHETNTLMLSVLFRQY 590
+N Y G +G P LSQIPY G K + PE PA PN+ILF+QNLP+ET +ML +LF QY
Sbjct: 122 LNPAYAGAYGATPALSQIPYPGGAKSLLPEAPAPPNNILFIQNLPNETTPMMLQMLFLQY 181
Query: 591 PGFKEVRMVEAKPGIAFVEYENEVQSTVAMNALQGFKIIGDNAMLITYAKK 743
PGFKEVRMVEAKPGIAFVEY +E+QST+AM ALQGFKI N MLITYAKK
Sbjct: 182 PGFKEVRMVEAKPGIAFVEYGDEMQSTMAMQALQGFKIAPQNPMLITYAKK 232
>ref|XP_002523100.1| small nuclear ribonucleoprotein U)1a,U)2b, putative [Ricinus
communis] gi|223537662|gb|EEF39285.1| small nuclear
ribonucleoprotein U)1a,U)2b, putative [Ricinus communis]
Length = 254
Score = 348 bits (894), Expect = 1e-93
Identities = 178/248 (71%), Positives = 206/248 (83%), Gaps = 5/248 (2%)
Frame = +3
Query: 15 VAMAEVTNPGGDVPPNQTIYINNLNEKIKLDELKKSLNAVFSQFGKILEVLAFKTLKHKG 194
VA N G ++ PN TIYINNLNEKIKLDELKKSL+AVFSQFGKI+E+LAFKTLKHKG
Sbjct: 9 VADVNNVNTGNEISPNMTIYINNLNEKIKLDELKKSLHAVFSQFGKIIEILAFKTLKHKG 68
Query: 195 QAWVVFDEVSSATNALRQMQGFPFYDKPLRIQYAKTKSDVIAKADGTFVPREKRKKHEER 374
QAWVVF++V SATNA+RQMQ FPFYDKP+RI +AKTKSDVIAKADGTFVPREKRK+HEE+
Sbjct: 69 QAWVVFEDVQSATNAIRQMQSFPFYDKPMRIHFAKTKSDVIAKADGTFVPREKRKRHEEK 128
Query: 375 AGKKRKEQHDATQP-VGM--NYPGTFGVAPPLSQIPYMG--KPVAPEVPAAPNSILFVQN 539
GK++KEQHDA Q +GM Y G +G PPLSQIPY G K + PE PA PN+ILF+QN
Sbjct: 129 -GKRKKEQHDANQAGIGMAPAYAGAYGATPPLSQIPYPGGAKSMVPEAPAPPNNILFIQN 187
Query: 540 LPHETNTLMLSVLFRQYPGFKEVRMVEAKPGIAFVEYENEVQSTVAMNALQGFKIIGDNA 719
LP++T T++L +LF+ Y GFKEVRMVE+KPGIAFVEY +E+QSTVAM LQG K I N
Sbjct: 188 LPNDTTTMVLQMLFQHYAGFKEVRMVESKPGIAFVEYADEMQSTVAMQGLQGLK-IQQNP 246
Query: 720 MLITYAKK 743
MLITYAKK
Sbjct: 247 MLITYAKK 254
>ref|XP_002880313.1| hypothetical protein ARALYDRAFT_483938 [Arabidopsis lyrata subsp.
lyrata] gi|297326152|gb|EFH56572.1| hypothetical protein
ARALYDRAFT_483938 [Arabidopsis lyrata subsp. lyrata]
Length = 249
Score = 348 bits (892), Expect = 2e-93
Identities = 177/248 (71%), Positives = 201/248 (81%), Gaps = 7/248 (2%)
Frame = +3
Query: 21 MAEVTNPGG-DVPPNQTIYINNLNEKIKLDELKKSLNAVFSQFGKILEVLAFKTLKHKGQ 197
M E GG +V PNQTIYINNLNEK+K+DELKKSLNAVFSQFGKILE+LAFKTLKHKGQ
Sbjct: 3 MQEANQGGGSEVSPNQTIYINNLNEKVKIDELKKSLNAVFSQFGKILEILAFKTLKHKGQ 62
Query: 198 AWVVFDEVSSATNALRQMQGFPFYDKPLRIQYAKTKSDVIAKADGTFVPREKRKKHEERA 377
AWVVFD SA+ A+ +M FPFYDK +RIQYAKTKSDV+AKADGTFVPREKRK+HEE+
Sbjct: 63 AWVVFDNADSASTAIAKMNDFPFYDKNMRIQYAKTKSDVVAKADGTFVPREKRKRHEEKG 122
Query: 378 GKKRKEQHDATQPVGM----NYPGTFGVAPPLSQIPYMG--KPVAPEVPAAPNSILFVQN 539
GKK+K+ H + +GM YPG +G APPLSQ+PY G KP PE PA PN+ILFVQN
Sbjct: 123 GKKKKDHHHDSTQMGMATNSAYPGVYGAAPPLSQVPYPGGVKPNLPEAPAPPNNILFVQN 182
Query: 540 LPHETNTLMLSVLFRQYPGFKEVRMVEAKPGIAFVEYENEVQSTVAMNALQGFKIIGDNA 719
LPHET ++L +LF QY GFKEVRMVEAKPGIAFVE+ +E+QSTVAM LQGFK I N
Sbjct: 183 LPHETTPMVLQMLFYQYQGFKEVRMVEAKPGIAFVEFADEMQSTVAMQGLQGFK-IQQNQ 241
Query: 720 MLITYAKK 743
MLITYAKK
Sbjct: 242 MLITYAKK 249
>ref|XP_002320337.2| SPLICEOSOMAL protein U1A [Populus trichocarpa]
gi|118485733|gb|ABK94716.1| unknown [Populus
trichocarpa] gi|550324046|gb|EEE98652.2| SPLICEOSOMAL
protein U1A [Populus trichocarpa]
Length = 254
Score = 348 bits (892), Expect = 2e-93
Identities = 175/239 (73%), Positives = 204/239 (85%), Gaps = 5/239 (2%)
Frame = +3
Query: 42 GGDVPPNQTIYINNLNEKIKLDELKKSLNAVFSQFGKILEVLAFKTLKHKGQAWVVFDEV 221
G DV N TIYINNLNEKIK+DELK SL+AVFSQFGKILE+LAFKTLKHKGQAWV+F++V
Sbjct: 17 GTDVSQNMTIYINNLNEKIKIDELKTSLHAVFSQFGKILEILAFKTLKHKGQAWVIFEDV 76
Query: 222 SSATNALRQMQGFPFYDKPLRIQYAKTKSDVIAKADGTFVPREKRKKHEERAGKKRKEQH 401
SA+NA+RQMQ FPFYDKP+RIQYAKTKSD+IAKADGTFVPREKR++HEE+ GKK+K+QH
Sbjct: 77 QSASNAIRQMQSFPFYDKPMRIQYAKTKSDIIAKADGTFVPREKRRRHEEK-GKKKKDQH 135
Query: 402 DATQ-PVGMN--YPGTFGVAPPLSQIPYMG--KPVAPEVPAAPNSILFVQNLPHETNTLM 566
DA Q VG+ Y G +G P L QIPY G K + PE PA PN+ILF+QNLP+ET +M
Sbjct: 136 DANQVGVGLTPAYGGAYGTTPSLLQIPYPGGVKSMVPEAPAPPNNILFIQNLPNETTPMM 195
Query: 567 LSVLFRQYPGFKEVRMVEAKPGIAFVEYENEVQSTVAMNALQGFKIIGDNAMLITYAKK 743
L +LF+QYPGFKEVRMVEAKPGIAFVEY +E+QST AM+ LQGFKI+ N+MLITYAKK
Sbjct: 196 LQMLFQQYPGFKEVRMVEAKPGIAFVEYGDEMQSTGAMHGLQGFKILQQNSMLITYAKK 254
>ref|XP_004494379.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Cicer
arietinum]
Length = 241
Score = 347 bits (890), Expect = 4e-93
Identities = 177/242 (73%), Positives = 204/242 (84%), Gaps = 5/242 (2%)
Frame = +3
Query: 33 TNPGGDVPPNQTIYINNLNEKIKLDELKKSLNAVFSQFGKILEVLAFKTLKHKGQAWVVF 212
TN + P N TIYINNLNEKIK++ELKKSL+AVFSQFGKILEVLAFKTLKHKGQAWV+F
Sbjct: 4 TNAVSETPQNMTIYINNLNEKIKIEELKKSLHAVFSQFGKILEVLAFKTLKHKGQAWVIF 63
Query: 213 DEVSSATNALRQMQGFPFYDKPLRIQYAKTKSDVIAKADGTFVPREKRKKHEERAGKKRK 392
++VSSA+NALRQMQGFPFYDKP+RIQYA+TKSD+IAKADGTFVPREKRK+H+++ GKKRK
Sbjct: 64 EDVSSASNALRQMQGFPFYDKPMRIQYARTKSDIIAKADGTFVPREKRKRHDDK-GKKRK 122
Query: 393 EQHDAT-QPVGMN--YPGTFGVAPPLSQIPYMG--KPVAPEVPAAPNSILFVQNLPHETN 557
+QHDA +G+N YPG +G P IPY G K + PE PA PN+ILF+QNLP+ET
Sbjct: 123 DQHDANLAGMGLNPSYPGAYGATP---AIPYPGGAKSMVPEAPAPPNNILFIQNLPNETT 179
Query: 558 TLMLSVLFRQYPGFKEVRMVEAKPGIAFVEYENEVQSTVAMNALQGFKIIGDNAMLITYA 737
+ML +LF QYPGFKEVRMVE KPGIAFVEY +E+QSTVAM ALQGFKI N MLITYA
Sbjct: 180 PMMLQMLFLQYPGFKEVRMVETKPGIAFVEYGDEMQSTVAMQALQGFKITPQNPMLITYA 239
Query: 738 KK 743
KK
Sbjct: 240 KK 241
>ref|NP_182280.1| spliceosomal protein U1A [Arabidopsis thaliana]
gi|75319458|sp|Q39244.1|RU1A_ARATH RecName: Full=U1
small nuclear ribonucleoprotein A; Short=U1 snRNP
protein A gi|1050430|emb|CAA90283.1| U1snRNP-specific
protein [Arabidopsis thaliana] gi|2529669|gb|AAC62852.1|
small nuclear ribonucleoprotein U1A [Arabidopsis
thaliana] gi|15450591|gb|AAK96567.1| At2g47580/T30B22.12
[Arabidopsis thaliana] gi|16649011|gb|AAL24357.1| small
nuclear ribonucleoprotein U1A [Arabidopsis thaliana]
gi|20259986|gb|AAM13340.1| small nuclear
ribonucleoprotein U1A [Arabidopsis thaliana]
gi|22655484|gb|AAM98334.1| At2g47580/T30B22.12
[Arabidopsis thaliana] gi|330255767|gb|AEC10861.1|
spliceosomal protein U1A [Arabidopsis thaliana]
Length = 250
Score = 346 bits (888), Expect = 7e-93
Identities = 177/249 (71%), Positives = 201/249 (80%), Gaps = 8/249 (3%)
Frame = +3
Query: 21 MAEVTNPGG-DVPPNQTIYINNLNEKIKLDELKKSLNAVFSQFGKILEVLAFKTLKHKGQ 197
M E GG +V PNQTIYINNLNEK+KLDELKKSLNAVFSQFGKILE+LAFKT KHKGQ
Sbjct: 3 MQEANQGGGSEVSPNQTIYINNLNEKVKLDELKKSLNAVFSQFGKILEILAFKTFKHKGQ 62
Query: 198 AWVVFDEVSSATNALRQMQGFPFYDKPLRIQYAKTKSDVIAKADGTFVPREKRKKHEERA 377
AWVVFD SA+ A+ +M FPFYDK +RIQYAKTKSDV+AKADGTFVPREKRK+HEE+
Sbjct: 63 AWVVFDNTESASTAIAKMNNFPFYDKEMRIQYAKTKSDVVAKADGTFVPREKRKRHEEKG 122
Query: 378 G--KKRKEQHDATQ---PVGMNYPGTFGVAPPLSQIPYMG--KPVAPEVPAAPNSILFVQ 536
G KK+ + HD+TQ P+ YPG +G APPLSQ+PY G KP PE PA PN+ILFVQ
Sbjct: 123 GGKKKKDQHHDSTQMGMPMNSAYPGVYGAAPPLSQVPYPGGMKPNMPEAPAPPNNILFVQ 182
Query: 537 NLPHETNTLMLSVLFRQYPGFKEVRMVEAKPGIAFVEYENEVQSTVAMNALQGFKIIGDN 716
NLPHET ++L +LF QY GFKEVRM+EAKPGIAFVE+ +E+QSTVAM LQGFK I N
Sbjct: 183 NLPHETTPMVLQMLFCQYQGFKEVRMIEAKPGIAFVEFADEMQSTVAMQGLQGFK-IQQN 241
Query: 717 AMLITYAKK 743
MLITYAKK
Sbjct: 242 QMLITYAKK 250
>ref|XP_003554737.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Glycine max]
Length = 241
Score = 341 bits (875), Expect = 2e-91
Identities = 175/244 (71%), Positives = 205/244 (84%), Gaps = 3/244 (1%)
Frame = +3
Query: 21 MAEVTNPGGDVPPNQTIYINNLNEKIKLDELKKSLNAVFSQFGKILEVLAFKTLKHKGQA 200
M+EV N ++P N TIYINNLNEKIK+DELKKSLNAVF+QFGKILEVLAFKTLKHKGQA
Sbjct: 1 MSEV-NATPEIPQNNTIYINNLNEKIKIDELKKSLNAVFTQFGKILEVLAFKTLKHKGQA 59
Query: 201 WVVFDEVSSATNALRQMQGFPFYDKPLRIQYAKTKSDVIAKADGTFVPREKRKKHEERAG 380
WVVF++ SSA+NALRQMQGFPFYDKP+RIQYAKTKSD+IAKADGTFVPREKRK+H+E+A
Sbjct: 60 WVVFEDASSASNALRQMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPREKRKRHDEKA- 118
Query: 381 KKRKEQHDAT-QPVGMN--YPGTFGVAPPLSQIPYMGKPVAPEVPAAPNSILFVQNLPHE 551
KKRK+QHD+ +G+N Y G +G AP ++ P K + PE PA PN+ILF+QNLP++
Sbjct: 119 KKRKDQHDSNLAGMGLNPAYAGAYGAAPAIA-YPGGAKSMVPEAPAPPNNILFIQNLPND 177
Query: 552 TNTLMLSVLFRQYPGFKEVRMVEAKPGIAFVEYENEVQSTVAMNALQGFKIIGDNAMLIT 731
+ +ML +LF QYPGFKEVRMVE KPGIAFVEY +E+QSTVAM LQGFKI N MLIT
Sbjct: 178 STPMMLQMLFLQYPGFKEVRMVETKPGIAFVEYGDEMQSTVAMQTLQGFKITPQNPMLIT 237
Query: 732 YAKK 743
YAKK
Sbjct: 238 YAKK 241
>ref|XP_006444378.1| hypothetical protein CICLE_v10021907mg [Citrus clementina]
gi|568852654|ref|XP_006479987.1| PREDICTED: U1 small
nuclear ribonucleoprotein A-like [Citrus sinensis]
gi|557546640|gb|ESR57618.1| hypothetical protein
CICLE_v10021907mg [Citrus clementina]
Length = 245
Score = 340 bits (872), Expect = 5e-91
Identities = 170/244 (69%), Positives = 203/244 (83%), Gaps = 5/244 (2%)
Frame = +3
Query: 27 EVTNPGGDVPPNQTIYINNLNEKIKLDELKKSLNAVFSQFGKILEVLAFKTLKHKGQAWV 206
EV N G ++ PN TIYINNLNEK+K+D+LK+SL+AVF QFG ILE+LAFKTLKHKGQAW+
Sbjct: 4 EVANQGNEISPNNTIYINNLNEKVKIDQLKQSLHAVFKQFGTILEILAFKTLKHKGQAWL 63
Query: 207 VFDEVSSATNALRQMQGFPFYDKPLRIQYAKTKSDVIAKADGTFVPREKRKKHEERAGKK 386
VF +V+SAT A+ +MQGFPFYDKP+RIQYAKTKSD+IAKADGTFVPRE+RK+HEE+ GKK
Sbjct: 64 VFKDVASATAAVEKMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRERRKRHEEK-GKK 122
Query: 387 RKEQHDATQP-VGMN--YPGTFGVAPPLSQIPYMG--KPVAPEVPAAPNSILFVQNLPHE 551
RK+QHDA Q +G+N Y G +G PPLSQIPY G K V PE PA PN+ILFVQN+PH+
Sbjct: 123 RKDQHDANQAGMGLNPAYAGAYGATPPLSQIPYPGGAKSVIPEAPAPPNNILFVQNVPHD 182
Query: 552 TNTLMLSVLFRQYPGFKEVRMVEAKPGIAFVEYENEVQSTVAMNALQGFKIIGDNAMLIT 731
T + L + F Q+PGFKEVRMVEAKPGIAFVEY +E+Q+TVAM +LQ K IG +LIT
Sbjct: 183 TTPMALQMFFSQFPGFKEVRMVEAKPGIAFVEYGDEMQATVAMQSLQSLK-IGQQQLLIT 241
Query: 732 YAKK 743
YAKK
Sbjct: 242 YAKK 245
>gb|ESW19238.1| hypothetical protein PHAVU_006G108000g [Phaseolus vulgaris]
Length = 241
Score = 340 bits (871), Expect = 7e-91
Identities = 173/237 (72%), Positives = 202/237 (85%), Gaps = 5/237 (2%)
Frame = +3
Query: 48 DVPPNQTIYINNLNEKIKLDELKKSLNAVFSQFGKILEVLAFKTLKHKGQAWVVFDEVSS 227
++P N TIYINN+NEKIK++ELKKSLNAVF+QFGKILEVLAFKTLKHKGQAWVVF++VSS
Sbjct: 9 EIPQNNTIYINNINEKIKIEELKKSLNAVFTQFGKILEVLAFKTLKHKGQAWVVFEDVSS 68
Query: 228 ATNALRQMQGFPFYDKPLRIQYAKTKSDVIAKADGTFVPREKRKKHEERAGKKRKEQHDA 407
A+NALRQMQGFPFYDKP++IQYAKTKSDVIAKADGTFVPREKRK+H+++ GKKRK+QHDA
Sbjct: 69 ASNALRQMQGFPFYDKPMKIQYAKTKSDVIAKADGTFVPREKRKRHDDK-GKKRKDQHDA 127
Query: 408 T-QPVGMN--YPGTFGVAPPLSQIPYMG--KPVAPEVPAAPNSILFVQNLPHETNTLMLS 572
+G+N Y G +G P IPY G K + PE PA PN+ILF+QNLP+E+ +ML
Sbjct: 128 NLAGMGLNPAYSGGYGATP---TIPYPGGAKSMVPEAPAPPNNILFIQNLPNESTPMMLQ 184
Query: 573 VLFRQYPGFKEVRMVEAKPGIAFVEYENEVQSTVAMNALQGFKIIGDNAMLITYAKK 743
+LF QYPGFKEVRMVE KPGIAFVEY +E+QSTVAM +LQGFKI N MLITYAKK
Sbjct: 185 MLFLQYPGFKEVRMVETKPGIAFVEYGDEMQSTVAMQSLQGFKITPQNPMLITYAKK 241