BLASTX nr result

ID: Achyranthes23_contig00027234 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00027234
         (545 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004981486.1| PREDICTED: glycine-rich RNA-binding protein ...   107   2e-21
ref|XP_006363377.1| PREDICTED: cold-inducible RNA-binding protei...   106   4e-21
ref|NP_001169115.1| uncharacterized protein LOC100382959 [Zea ma...   105   5e-21
ref|XP_002284323.1| PREDICTED: cold-inducible RNA-binding protei...   105   7e-21
gb|EXC35053.1| Cold-inducible RNA-binding protein [Morus notabilis]   104   2e-20
ref|XP_006649858.1| PREDICTED: glycine-rich RNA-binding protein ...   102   6e-20
ref|XP_002461004.1| hypothetical protein SORBIDRAFT_02g039025 [S...   102   6e-20
ref|XP_002864655.1| predicted protein [Arabidopsis lyrata subsp....   101   1e-19
ref|XP_002877450.1| hypothetical protein ARALYDRAFT_905782 [Arab...    99   5e-19
ref|XP_004159670.1| PREDICTED: cold-inducible RNA-binding protei...    99   7e-19
ref|XP_002299889.1| RNA recognition motif-containing family prot...    99   8e-19
ref|XP_002533105.1| cold-inducible RNA binding protein, putative...    98   1e-18
ref|XP_006279867.1| hypothetical protein CARUB_v10028559mg [Caps...    97   2e-18
ref|XP_004135289.1| PREDICTED: cold-inducible RNA-binding protei...    97   2e-18
ref|XP_006292104.1| hypothetical protein CARUB_v10018300mg [Caps...    97   3e-18
gb|EMJ09753.1| hypothetical protein PRUPE_ppa024320mg [Prunus pe...    97   3e-18
ref|XP_003575643.1| PREDICTED: glycine-rich RNA-binding protein ...    97   3e-18
ref|NP_190188.1| RNA recognition motif-containing protein [Arabi...    96   4e-18
ref|XP_004487030.1| PREDICTED: glycine-rich RNA-binding protein ...    94   2e-17
ref|XP_006848599.1| hypothetical protein AMTR_s00168p00066520 [A...    93   5e-17

>ref|XP_004981486.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
           isoform X1 [Setaria italica]
           gi|514813407|ref|XP_004981487.1| PREDICTED: glycine-rich
           RNA-binding protein 4, mitochondrial-like isoform X2
           [Setaria italica]
          Length = 104

 Score =  107 bits (267), Expect = 2e-21
 Identities = 51/97 (52%), Positives = 76/97 (78%), Gaps = 1/97 (1%)
 Frame = +3

Query: 129 LTALKSQFVTAR-FNSELFVSRLSFYTKYDEFQEMFSQFGNVSKARLIMDSRTGRTKGYG 305
           +  L SQ +  R F++E+FVSRLSFYT  +E +++FS FGNV +ARL+ DS+TGR KG+G
Sbjct: 8   MVGLSSQVLGMRCFSTEIFVSRLSFYTTEEELKDVFSPFGNVKEARLMRDSQTGRLKGFG 67

Query: 306 FVTFETEAQAQNAIKALNGKIIQGRLIFVESATNSKT 416
           FV + ++A+A+ A+KA++G+I++GRLIFVE A   K+
Sbjct: 68  FVNYSSQAEAEKAVKAMHGRILRGRLIFVEMAQGRKS 104


>ref|XP_006363377.1| PREDICTED: cold-inducible RNA-binding protein-like [Solanum
           tuberosum]
          Length = 125

 Score =  106 bits (264), Expect = 4e-21
 Identities = 60/126 (47%), Positives = 83/126 (65%), Gaps = 4/126 (3%)
 Frame = +3

Query: 75  VKILLSPKMMRIAARLRCL----TALKSQFVTARFNSELFVSRLSFYTKYDEFQEMFSQF 242
           +K  L P        ++CL    TAL S+   A+   +LFV+RLSFYT  ++ +++FS F
Sbjct: 1   MKYGLKPGTSMQFGEIQCLFDLDTALLSETQMAK-GLQLFVNRLSFYTTSEQLKKLFSPF 59

Query: 243 GNVSKARLIMDSRTGRTKGYGFVTFETEAQAQNAIKALNGKIIQGRLIFVESATNSKTDG 422
           G V++ARL+ D RT R KG+GFVTFE+EA AQNA+ +LNG+I+ GRLIFVE A  ++   
Sbjct: 60  GVVTEARLVKDPRTQRPKGFGFVTFESEADAQNALNSLNGRIVDGRLIFVEVAETTEAVE 119

Query: 423 NDTLSK 440
           N T  K
Sbjct: 120 NKTSQK 125


>ref|NP_001169115.1| uncharacterized protein LOC100382959 [Zea mays]
           gi|223975005|gb|ACN31690.1| unknown [Zea mays]
           gi|414887554|tpg|DAA63568.1| TPA: hypothetical protein
           ZEAMMB73_633512 [Zea mays]
          Length = 103

 Score =  105 bits (263), Expect = 5e-21
 Identities = 51/91 (56%), Positives = 73/91 (80%)
 Frame = +3

Query: 129 LTALKSQFVTARFNSELFVSRLSFYTKYDEFQEMFSQFGNVSKARLIMDSRTGRTKGYGF 308
           LT L SQ +   F++E+FVSRLSFYT  +EF+++FS FG V +ARL+ D +TGR KG+GF
Sbjct: 8   LTGLTSQVLRC-FSTEIFVSRLSFYTTEEEFKDIFSPFGTVEEARLMRDHQTGRMKGFGF 66

Query: 309 VTFETEAQAQNAIKALNGKIIQGRLIFVESA 401
           V + ++A+A+ A+KA++GKI++GRLIFVE A
Sbjct: 67  VKYSSQAEAEKAVKAMDGKILRGRLIFVEMA 97


>ref|XP_002284323.1| PREDICTED: cold-inducible RNA-binding protein [Vitis vinifera]
           gi|297746123|emb|CBI16179.3| unnamed protein product
           [Vitis vinifera]
          Length = 112

 Score =  105 bits (262), Expect = 7e-21
 Identities = 56/105 (53%), Positives = 74/105 (70%)
 Frame = +3

Query: 99  MMRIAARLRCLTALKSQFVTARFNSELFVSRLSFYTKYDEFQEMFSQFGNVSKARLIMDS 278
           MM+ A  L     LK  F   RF+SE+FV+RLS YT  +E  EMFS FG V++ARLI D 
Sbjct: 6   MMKTAGNL-----LKPWFSARRFSSEIFVTRLSGYTTNEELIEMFSPFGVVTQARLIKDP 60

Query: 279 RTGRTKGYGFVTFETEAQAQNAIKALNGKIIQGRLIFVESATNSK 413
           +T R KG+GFV FE+E  A+ A+KA+NG+I++GRLIFVE A  ++
Sbjct: 61  KTQRPKGFGFVKFESEVDAEKALKAMNGRIVRGRLIFVEIAKTTR 105


>gb|EXC35053.1| Cold-inducible RNA-binding protein [Morus notabilis]
          Length = 94

 Score =  104 bits (259), Expect = 2e-20
 Identities = 49/84 (58%), Positives = 67/84 (79%)
 Frame = +3

Query: 162 RFNSELFVSRLSFYTKYDEFQEMFSQFGNVSKARLIMDSRTGRTKGYGFVTFETEAQAQN 341
           R +S+LFVSRLS YT  +  +++FS FG V +ARL++DS+T R KG+GFVT+E+E +AQ 
Sbjct: 4   RLSSQLFVSRLSSYTTNEHLKKLFSPFGEVLEARLVLDSKTQRPKGFGFVTYESEVEAQK 63

Query: 342 AIKALNGKIIQGRLIFVESATNSK 413
           A+KA+NG+I+ GRLIFVE A  SK
Sbjct: 64  ALKAMNGRIVDGRLIFVEVAKTSK 87


>ref|XP_006649858.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
           [Oryza brachyantha]
          Length = 105

 Score =  102 bits (254), Expect = 6e-20
 Identities = 49/97 (50%), Positives = 75/97 (77%), Gaps = 1/97 (1%)
 Frame = +3

Query: 129 LTALKSQFVTAR-FNSELFVSRLSFYTKYDEFQEMFSQFGNVSKARLIMDSRTGRTKGYG 305
           L  L S+ V A+ F++E+FVSRLSFYT  +E + +F+ FG V +ARL+ D++TGR KG+G
Sbjct: 8   LAGLASRMVGAKSFSTEIFVSRLSFYTTEEELKNIFTPFGAVEEARLVRDNQTGRPKGFG 67

Query: 306 FVTFETEAQAQNAIKALNGKIIQGRLIFVESATNSKT 416
           FV + ++A+A+ A+KA++G+I++GRLIFVE A   K+
Sbjct: 68  FVKYSSQAEAEKAVKAMDGRILRGRLIFVEIAKERKS 104


>ref|XP_002461004.1| hypothetical protein SORBIDRAFT_02g039025 [Sorghum bicolor]
           gi|241924381|gb|EER97525.1| hypothetical protein
           SORBIDRAFT_02g039025 [Sorghum bicolor]
          Length = 83

 Score =  102 bits (254), Expect = 6e-20
 Identities = 45/79 (56%), Positives = 67/79 (84%)
 Frame = +3

Query: 165 FNSELFVSRLSFYTKYDEFQEMFSQFGNVSKARLIMDSRTGRTKGYGFVTFETEAQAQNA 344
           F++E+FVSRLSFYT  +EF+++FS FG V +ARL+ D +TGR KG+GFV + ++A+A+ A
Sbjct: 4   FSTEIFVSRLSFYTTEEEFKDVFSSFGTVEEARLMRDQQTGRIKGFGFVKYSSQAEAEKA 63

Query: 345 IKALNGKIIQGRLIFVESA 401
           +KA++G+I++GRLIFVE A
Sbjct: 64  VKAMDGRILRGRLIFVEMA 82


>ref|XP_002864655.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297310490|gb|EFH40914.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 95

 Score =  101 bits (252), Expect = 1e-19
 Identities = 48/80 (60%), Positives = 63/80 (78%)
 Frame = +3

Query: 162 RFNSELFVSRLSFYTKYDEFQEMFSQFGNVSKARLIMDSRTGRTKGYGFVTFETEAQAQN 341
           RF ++LFVSRLS YT     +++F+ FG + +ARLI D +T R KG+GF+TFE+E  AQN
Sbjct: 4   RFTTQLFVSRLSAYTTDQSLRQLFAPFGQIIEARLIRDQQTQRPKGFGFITFESEDDAQN 63

Query: 342 AIKALNGKIIQGRLIFVESA 401
           A+KALNGKI+ GRLIFVE+A
Sbjct: 64  ALKALNGKIVNGRLIFVEAA 83


>ref|XP_002877450.1| hypothetical protein ARALYDRAFT_905782 [Arabidopsis lyrata subsp.
           lyrata] gi|297323288|gb|EFH53709.1| hypothetical protein
           ARALYDRAFT_905782 [Arabidopsis lyrata subsp. lyrata]
          Length = 102

 Score = 99.4 bits (246), Expect = 5e-19
 Identities = 49/93 (52%), Positives = 68/93 (73%)
 Frame = +3

Query: 162 RFNSELFVSRLSFYTKYDEFQEMFSQFGNVSKARLIMDSRTGRTKGYGFVTFETEAQAQN 341
           R +++LFVSRLS YT     +++FS FG + +ARLI DS T R KG+GF+TFE+E  A+ 
Sbjct: 4   RISAQLFVSRLSAYTTDQSLRQLFSPFGQIKEARLIRDSETQRPKGFGFITFESEDDARK 63

Query: 342 AIKALNGKIIQGRLIFVESATNSKTDGNDTLSK 440
           A+K+L+GKI++GRLIFVE A +S+    D  SK
Sbjct: 64  ALKSLDGKIVEGRLIFVEVAKSSEEVTTDINSK 96


>ref|XP_004159670.1| PREDICTED: cold-inducible RNA-binding protein B-like [Cucumis
           sativus]
          Length = 95

 Score = 99.0 bits (245), Expect = 7e-19
 Identities = 48/92 (52%), Positives = 67/92 (72%)
 Frame = +3

Query: 162 RFNSELFVSRLSFYTKYDEFQEMFSQFGNVSKARLIMDSRTGRTKGYGFVTFETEAQAQN 341
           R  SELF+SRLS YT  +  + +FS FG++S+ARLI D +T R KG+GFVTF++ A+A+ 
Sbjct: 4   RLGSELFISRLSSYTTLERLKNLFSPFGSISEARLIRDPKTERPKGFGFVTFQSPAEAKK 63

Query: 342 AIKALNGKIIQGRLIFVESATNSKTDGNDTLS 437
           A+KA++G+I+ GRLIFVE A   K   + T S
Sbjct: 64  ALKAMDGRIVDGRLIFVEFAKTEKHGVDPTSS 95


>ref|XP_002299889.1| RNA recognition motif-containing family protein [Populus
           trichocarpa] gi|222847147|gb|EEE84694.1| RNA recognition
           motif-containing family protein [Populus trichocarpa]
          Length = 88

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 48/84 (57%), Positives = 65/84 (77%)
 Frame = +3

Query: 162 RFNSELFVSRLSFYTKYDEFQEMFSQFGNVSKARLIMDSRTGRTKGYGFVTFETEAQAQN 341
           R   +LFVSRLS YT   E + +FS FG VS+ARL+++S+T R KG+GFVTFE+EA A  
Sbjct: 4   RIGLQLFVSRLSSYTTNHELKRLFSPFGAVSEARLVVESKTLRPKGFGFVTFESEADAHK 63

Query: 342 AIKALNGKIIQGRLIFVESATNSK 413
           A+KA+NG+I+ GRLIFVE A +++
Sbjct: 64  ALKAMNGRIVNGRLIFVEVAKDTE 87


>ref|XP_002533105.1| cold-inducible RNA binding protein, putative [Ricinus communis]
           gi|223527096|gb|EEF29277.1| cold-inducible RNA binding
           protein, putative [Ricinus communis]
          Length = 94

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 48/89 (53%), Positives = 66/89 (74%)
 Frame = +3

Query: 162 RFNSELFVSRLSFYTKYDEFQEMFSQFGNVSKARLIMDSRTGRTKGYGFVTFETEAQAQN 341
           R  S+LFV RLS YT   + +++FS FG V +ARL++D RT + KG+GFVTF++E+QAQ 
Sbjct: 4   RLGSQLFVGRLSCYTTNQKLEKLFSPFGIVKEARLVLDPRTQKPKGFGFVTFDSESQAQK 63

Query: 342 AIKALNGKIIQGRLIFVESATNSKTDGND 428
           A+KA+NG+I+ GRL+FVE A  S   G D
Sbjct: 64  ALKAMNGRIVDGRLLFVEVA-KSINSGED 91


>ref|XP_006279867.1| hypothetical protein CARUB_v10028559mg [Capsella rubella]
           gi|482548571|gb|EOA12765.1| hypothetical protein
           CARUB_v10028559mg [Capsella rubella]
          Length = 98

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 45/80 (56%), Positives = 62/80 (77%)
 Frame = +3

Query: 162 RFNSELFVSRLSFYTKYDEFQEMFSQFGNVSKARLIMDSRTGRTKGYGFVTFETEAQAQN 341
           R+ ++LFVSRLS YT     +++FS FG +++ARLI D +T R KG+GF+TF++E  AQ 
Sbjct: 4   RYTAQLFVSRLSAYTTEQSLRQLFSPFGQITEARLIKDQQTQRPKGFGFITFKSENDAQK 63

Query: 342 AIKALNGKIIQGRLIFVESA 401
           A+KALNGKI+  RLIFVE+A
Sbjct: 64  ALKALNGKIVDSRLIFVEAA 83


>ref|XP_004135289.1| PREDICTED: cold-inducible RNA-binding protein B-like isoform 1
           [Cucumis sativus] gi|449435013|ref|XP_004135290.1|
           PREDICTED: cold-inducible RNA-binding protein B-like
           isoform 2 [Cucumis sativus]
          Length = 89

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 45/80 (56%), Positives = 63/80 (78%)
 Frame = +3

Query: 162 RFNSELFVSRLSFYTKYDEFQEMFSQFGNVSKARLIMDSRTGRTKGYGFVTFETEAQAQN 341
           R  SELF+SRLS YT  +  + +FS FG++S+ARLI D +T R KG+GFVTF++ A+A+ 
Sbjct: 4   RLGSELFISRLSSYTTLERLKNLFSPFGSISEARLIRDPKTERPKGFGFVTFQSPAEAKK 63

Query: 342 AIKALNGKIIQGRLIFVESA 401
           A+KA++G+I+ GRLIFVE A
Sbjct: 64  ALKAMDGRIVDGRLIFVEFA 83


>ref|XP_006292104.1| hypothetical protein CARUB_v10018300mg [Capsella rubella]
           gi|482560811|gb|EOA25002.1| hypothetical protein
           CARUB_v10018300mg [Capsella rubella]
          Length = 100

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 45/84 (53%), Positives = 65/84 (77%)
 Frame = +3

Query: 162 RFNSELFVSRLSFYTKYDEFQEMFSQFGNVSKARLIMDSRTGRTKGYGFVTFETEAQAQN 341
           R +++LFVSRLS Y      +++FSQFG + +ARLI DS+T R KG+GF+T+E+E  A+ 
Sbjct: 4   RVSAQLFVSRLSAYATDQSLRQLFSQFGQIKEARLIRDSKTQRPKGFGFITYESEDDARK 63

Query: 342 AIKALNGKIIQGRLIFVESATNSK 413
           A+K+L+GKI+ GRLIFVE A N++
Sbjct: 64  AMKSLDGKIVDGRLIFVEVAKNAE 87


>gb|EMJ09753.1| hypothetical protein PRUPE_ppa024320mg [Prunus persica]
          Length = 94

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 45/92 (48%), Positives = 71/92 (77%)
 Frame = +3

Query: 162 RFNSELFVSRLSFYTKYDEFQEMFSQFGNVSKARLIMDSRTGRTKGYGFVTFETEAQAQN 341
           R +S+LFV+RLS +T  ++ + +FS FG+V++AR+++D  T R KG+GFVT++++ +AQ 
Sbjct: 4   RLSSQLFVNRLSSFTNNEQLKRLFSPFGDVTEARMVVDRITQRPKGFGFVTYKSDVEAQK 63

Query: 342 AIKALNGKIIQGRLIFVESATNSKTDGNDTLS 437
           A+KA+NG+++ GRLIFVE A N K +  DT S
Sbjct: 64  ALKAMNGRMVDGRLIFVEFAQNQKQE-QDTKS 94


>ref|XP_003575643.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Brachypodium distachyon]
          Length = 108

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 43/87 (49%), Positives = 67/87 (77%)
 Frame = +3

Query: 156 TARFNSELFVSRLSFYTKYDEFQEMFSQFGNVSKARLIMDSRTGRTKGYGFVTFETEAQA 335
           T  F++E+FVS+LSFYT  +E + +FS FG + +ARL+ D++TGR KG+GFV + ++  A
Sbjct: 21  TKGFSTEIFVSKLSFYTTEEELKNIFSPFGAIEEARLMRDNQTGRPKGFGFVKYSSQVAA 80

Query: 336 QNAIKALNGKIIQGRLIFVESATNSKT 416
           + A+KA++G+II+GR+IFVE+A    T
Sbjct: 81  EKAVKAMDGRIIRGRIIFVETAKERDT 107


>ref|NP_190188.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
           gi|7630030|emb|CAB88326.1| RNA binding protein-like
           [Arabidopsis thaliana] gi|46931202|gb|AAT06405.1|
           At3g46020 [Arabidopsis thaliana]
           gi|50253530|gb|AAT71967.1| At3g46020 [Arabidopsis
           thaliana] gi|332644581|gb|AEE78102.1| RNA recognition
           motif-containing protein [Arabidopsis thaliana]
          Length = 102

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 45/84 (53%), Positives = 64/84 (76%)
 Frame = +3

Query: 162 RFNSELFVSRLSFYTKYDEFQEMFSQFGNVSKARLIMDSRTGRTKGYGFVTFETEAQAQN 341
           R +++LFVSRLS YT     +++FS FG + +ARLI DS T R KG+GF+TF++E  A+ 
Sbjct: 4   RISAQLFVSRLSAYTTDQSLRQLFSPFGQIKEARLIRDSETQRPKGFGFITFDSEDDARK 63

Query: 342 AIKALNGKIIQGRLIFVESATNSK 413
           A+K+L+GKI+ GRLIFVE A N++
Sbjct: 64  ALKSLDGKIVDGRLIFVEVAKNAE 87


>ref|XP_004487030.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
           isoform X1 [Cicer arietinum]
          Length = 88

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 43/83 (51%), Positives = 64/83 (77%)
 Frame = +3

Query: 153 VTARFNSELFVSRLSFYTKYDEFQEMFSQFGNVSKARLIMDSRTGRTKGYGFVTFETEAQ 332
           ++ R  ++LFVSRLSFYT  ++F+ MFS FG +++A L+MD +  R KG+GFV++ +E +
Sbjct: 1   MSQRIGTKLFVSRLSFYTTMEQFKSMFSPFGVLTEATLVMDPKIKRAKGFGFVSYRSEIE 60

Query: 333 AQNAIKALNGKIIQGRLIFVESA 401
           A+ A+K+LNG I+ GRLIFVE A
Sbjct: 61  AEKAMKSLNGTIVNGRLIFVEPA 83


>ref|XP_006848599.1| hypothetical protein AMTR_s00168p00066520 [Amborella trichopoda]
           gi|548851921|gb|ERN10180.1| hypothetical protein
           AMTR_s00168p00066520 [Amborella trichopoda]
          Length = 125

 Score = 92.8 bits (229), Expect = 5e-17
 Identities = 45/88 (51%), Positives = 63/88 (71%)
 Frame = +3

Query: 165 FNSELFVSRLSFYTKYDEFQEMFSQFGNVSKARLIMDSRTGRTKGYGFVTFETEAQAQNA 344
           F+SELFVSRLSFY+     ++ FS FG V +ARL++D  T R KGYGF+ +++E +AQ A
Sbjct: 30  FSSELFVSRLSFYSTEQSLKDAFSPFGEVIEARLVIDKATLRPKGYGFIRYQSEIEAQKA 89

Query: 345 IKALNGKIIQGRLIFVESATNSKTDGND 428
           +KA++G+ + GRLIFVE A      G+D
Sbjct: 90  MKAMDGRFLGGRLIFVEVAKPRPEVGDD 117


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