BLASTX nr result

ID: Achyranthes23_contig00026995 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00026995
         (818 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006357520.1| PREDICTED: H/ACA ribonucleoprotein complex n...    65   4e-08
ref|XP_006357519.1| PREDICTED: H/ACA ribonucleoprotein complex n...    65   4e-08
ref|XP_006357518.1| PREDICTED: H/ACA ribonucleoprotein complex n...    65   4e-08
ref|XP_006357517.1| PREDICTED: H/ACA ribonucleoprotein complex n...    65   4e-08
emb|CBI28917.3| unnamed protein product [Vitis vinifera]               64   6e-08
emb|CAN75706.1| hypothetical protein VITISV_031419 [Vitis vinifera]    64   6e-08
ref|XP_004243804.1| PREDICTED: uncharacterized protein LOC101262...    59   2e-06

>ref|XP_006357520.1| PREDICTED: H/ACA ribonucleoprotein complex non-core subunit
           NAF1-like isoform X4 [Solanum tuberosum]
          Length = 668

 Score = 64.7 bits (156), Expect = 4e-08
 Identities = 46/131 (35%), Positives = 60/131 (45%), Gaps = 8/131 (6%)
 Frame = -2

Query: 586 GMPWLQQNHPQNLQVPTPWLQQQQMPVMNPALCQQPFDLSQLVGAAATPFGPPNFSVGPA 407
           GM W QQ HPQ         Q  QMP+ N    +Q  + + L  +   P G PNF  GP+
Sbjct: 480 GMSWPQQGHPQ---------QMFQMPLPNALPFEQQINPT-LPPSFIFPGGLPNFGAGPS 529

Query: 406 NGPWVGMLGPNFPIQAPLNLGVQSQ--------SSQLPMSNAQQGQSCNSQPQSSFRGNE 251
            GPW    G N   Q+P+ +G+  Q          Q+P +  Q GQ+ NSQP +   G  
Sbjct: 530 FGPWPAF-GQNVFNQSPMAMGLPGQFTPAPMNLGGQVPANGPQSGQNNNSQPNAVVPGYL 588

Query: 250 EVSSQFNVGSS 218
             S  FN G S
Sbjct: 589 NGSPNFNQGQS 599


>ref|XP_006357519.1| PREDICTED: H/ACA ribonucleoprotein complex non-core subunit
           NAF1-like isoform X3 [Solanum tuberosum]
          Length = 689

 Score = 64.7 bits (156), Expect = 4e-08
 Identities = 46/131 (35%), Positives = 60/131 (45%), Gaps = 8/131 (6%)
 Frame = -2

Query: 586 GMPWLQQNHPQNLQVPTPWLQQQQMPVMNPALCQQPFDLSQLVGAAATPFGPPNFSVGPA 407
           GM W QQ HPQ         Q  QMP+ N    +Q  + + L  +   P G PNF  GP+
Sbjct: 501 GMSWPQQGHPQ---------QMFQMPLPNALPFEQQINPT-LPPSFIFPGGLPNFGAGPS 550

Query: 406 NGPWVGMLGPNFPIQAPLNLGVQSQ--------SSQLPMSNAQQGQSCNSQPQSSFRGNE 251
            GPW    G N   Q+P+ +G+  Q          Q+P +  Q GQ+ NSQP +   G  
Sbjct: 551 FGPWPAF-GQNVFNQSPMAMGLPGQFTPAPMNLGGQVPANGPQSGQNNNSQPNAVVPGYL 609

Query: 250 EVSSQFNVGSS 218
             S  FN G S
Sbjct: 610 NGSPNFNQGQS 620


>ref|XP_006357518.1| PREDICTED: H/ACA ribonucleoprotein complex non-core subunit
           NAF1-like isoform X2 [Solanum tuberosum]
          Length = 722

 Score = 64.7 bits (156), Expect = 4e-08
 Identities = 46/131 (35%), Positives = 60/131 (45%), Gaps = 8/131 (6%)
 Frame = -2

Query: 586 GMPWLQQNHPQNLQVPTPWLQQQQMPVMNPALCQQPFDLSQLVGAAATPFGPPNFSVGPA 407
           GM W QQ HPQ         Q  QMP+ N    +Q  + + L  +   P G PNF  GP+
Sbjct: 534 GMSWPQQGHPQ---------QMFQMPLPNALPFEQQINPT-LPPSFIFPGGLPNFGAGPS 583

Query: 406 NGPWVGMLGPNFPIQAPLNLGVQSQ--------SSQLPMSNAQQGQSCNSQPQSSFRGNE 251
            GPW    G N   Q+P+ +G+  Q          Q+P +  Q GQ+ NSQP +   G  
Sbjct: 584 FGPWPAF-GQNVFNQSPMAMGLPGQFTPAPMNLGGQVPANGPQSGQNNNSQPNAVVPGYL 642

Query: 250 EVSSQFNVGSS 218
             S  FN G S
Sbjct: 643 NGSPNFNQGQS 653


>ref|XP_006357517.1| PREDICTED: H/ACA ribonucleoprotein complex non-core subunit
           NAF1-like isoform X1 [Solanum tuberosum]
          Length = 743

 Score = 64.7 bits (156), Expect = 4e-08
 Identities = 46/131 (35%), Positives = 60/131 (45%), Gaps = 8/131 (6%)
 Frame = -2

Query: 586 GMPWLQQNHPQNLQVPTPWLQQQQMPVMNPALCQQPFDLSQLVGAAATPFGPPNFSVGPA 407
           GM W QQ HPQ         Q  QMP+ N    +Q  + + L  +   P G PNF  GP+
Sbjct: 555 GMSWPQQGHPQ---------QMFQMPLPNALPFEQQINPT-LPPSFIFPGGLPNFGAGPS 604

Query: 406 NGPWVGMLGPNFPIQAPLNLGVQSQ--------SSQLPMSNAQQGQSCNSQPQSSFRGNE 251
            GPW    G N   Q+P+ +G+  Q          Q+P +  Q GQ+ NSQP +   G  
Sbjct: 605 FGPWPAF-GQNVFNQSPMAMGLPGQFTPAPMNLGGQVPANGPQSGQNNNSQPNAVVPGYL 663

Query: 250 EVSSQFNVGSS 218
             S  FN G S
Sbjct: 664 NGSPNFNQGQS 674


>emb|CBI28917.3| unnamed protein product [Vitis vinifera]
          Length = 444

 Score = 63.9 bits (154), Expect = 6e-08
 Identities = 57/195 (29%), Positives = 80/195 (41%), Gaps = 14/195 (7%)
 Frame = -2

Query: 757 PSPMGPYFPGGPATIPQQVQQAEXXXXXXXXXXXXXXXXXXXXXXXNMAMSSGFQMNGMP 578
           P  +G +F GG   +P   Q A+                       N    + F  + +P
Sbjct: 236 PFGVGQFFAGG-GLVPPYPQMAQVAGFIPPPSGIWASGIMPCQQQQNTVFPNSFPTDTLP 294

Query: 577 WLQQNHPQNLQVPTPWLQQQQMPVMNPALCQQPFDLSQLVGAAATP-----FGPPNFSVG 413
           W  QNH      P P+    QMP+ N  L QQ FD     G AA P      G  NF + 
Sbjct: 295 WPPQNHH-----PHPF----QMPMPNGMLFQQQFD----PGHAAFPNAVLSSGQANFFMR 341

Query: 412 PANGPWVGMLGPNFPIQAPLNLGVQSQSSQLPMSNAQQ---------GQSCNSQPQSSFR 260
           P   PW G+   +   QA   +G+Q Q ++  +S  +Q         GQSC+ QP +  +
Sbjct: 342 PTYPPWPGLGAQSGLNQAAFGMGLQGQHARPIISAGEQGALSSGLPMGQSCDVQPPAVTQ 401

Query: 259 GNEEVSSQFNVGSSF 215
           G  + S QFN  +SF
Sbjct: 402 GKIQASQQFNQRASF 416


>emb|CAN75706.1| hypothetical protein VITISV_031419 [Vitis vinifera]
          Length = 641

 Score = 63.9 bits (154), Expect = 6e-08
 Identities = 57/195 (29%), Positives = 80/195 (41%), Gaps = 14/195 (7%)
 Frame = -2

Query: 757 PSPMGPYFPGGPATIPQQVQQAEXXXXXXXXXXXXXXXXXXXXXXXNMAMSSGFQMNGMP 578
           P  +G +F GG   +P   Q A+                       N    + F  + +P
Sbjct: 430 PFGVGQFFAGG-GLVPPYPQMAQVAGFIPPPSGIWASGIMPCQQQQNTVFPNSFPRDTLP 488

Query: 577 WLQQNHPQNLQVPTPWLQQQQMPVMNPALCQQPFDLSQLVGAAATP-----FGPPNFSVG 413
           W  QNH      P P+    QMP+ N  L QQ FD     G AA P      G  NF + 
Sbjct: 489 WPPQNHH-----PHPF----QMPMPNGMLFQQQFD----PGHAAFPNAVLSSGQANFFMR 535

Query: 412 PANGPWVGMLGPNFPIQAPLNLGVQSQSSQLPMSNAQQ---------GQSCNSQPQSSFR 260
           P   PW G+   +   QA   +G+Q Q ++  +S  +Q         GQSC+ QP +  +
Sbjct: 536 PTYPPWPGLGAQSGLNQAAFGMGLQGQHARPIISAGEQGALSSGLPMGQSCDVQPPAVTQ 595

Query: 259 GNEEVSSQFNVGSSF 215
           G  + S QFN  +SF
Sbjct: 596 GKIQASQQFNQRASF 610


>ref|XP_004243804.1| PREDICTED: uncharacterized protein LOC101262131 [Solanum
           lycopersicum]
          Length = 818

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 48/137 (35%), Positives = 59/137 (43%), Gaps = 14/137 (10%)
 Frame = -2

Query: 586 GMPWLQQNHPQNLQVPTPWLQQQQMPVMNPALCQQPFDLSQLVGAAATPFGPPNFSVGPA 407
           GM W QQ HPQ         Q  QMP+ N    +Q  + + L      P G PNF  GP 
Sbjct: 575 GMSWPQQGHPQ---------QMFQMPLPNALPFEQQINPA-LPPNFMFPGGLPNFGAGPP 624

Query: 406 NGPW--------------VGMLGPNFPIQAPLNLGVQSQSSQLPMSNAQQGQSCNSQPQS 269
            GPW              +G+ G   P  AP+NLG      Q+P +  Q GQ+ NSQP +
Sbjct: 625 FGPWPAFGQNVFNQPGMPMGLPGQFTP--APMNLG-----GQVPANGPQLGQNNNSQPNA 677

Query: 268 SFRGNEEVSSQFNVGSS 218
              G    S  FN G S
Sbjct: 678 VVPGYINGSPNFNQGQS 694


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