BLASTX nr result
ID: Achyranthes23_contig00026241
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Achyranthes23_contig00026241
(463 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ... 151 6e-48
gb|ABW74566.1| integrase [Boechera divaricarpa] 146 4e-45
emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera] 139 8e-42
emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera] 139 1e-41
emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera] 139 2e-41
gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group... 128 6e-38
gb|ABA99612.1| retrotransposon protein, putative, unclassified [... 128 6e-38
gb|ABR16288.1| unknown [Picea sitchensis] 126 2e-37
gb|ABA95820.1| retrotransposon protein, putative, unclassified [... 127 2e-37
gb|AFK88551.1| reverse transcriptase, partial [Arabidopsis halle... 120 4e-37
gb|AAT47077.1| putative polyprotein [Oryza sativa Japonica Group] 128 9e-37
gb|AFK88552.1| reverse transcriptase, partial [Arabidopsis halle... 119 3e-36
emb|CAN74303.1| hypothetical protein VITISV_032980 [Vitis vinifera] 123 3e-36
gb|AGH20679.1| reverse transcriptase, partial [Raphanus sativus] 120 6e-36
gb|AFK88548.1| reverse transcriptase, partial [Arabidopsis halle... 120 6e-36
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi... 119 7e-36
emb|CAN72600.1| hypothetical protein VITISV_036712 [Vitis vinifera] 121 7e-36
gb|AFK88549.1| reverse transcriptase, partial [Arabidopsis halle... 119 8e-36
gb|AFK88543.1| reverse transcriptase, partial [Arabidopsis halle... 119 8e-36
gb|AFK88542.1| reverse transcriptase, partial [Arabidopsis halle... 119 8e-36
>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1333
Score = 151 bits (382), Expect(2) = 6e-48
Identities = 69/106 (65%), Positives = 90/106 (84%)
Frame = -2
Query: 321 PVYQPEVMSVFLNGELEEEVYVAQPKVYVVSGEENKVYRLKKAPYGLKQSPRAWYYKIDS 142
PVYQ +V S FLNG+LEEEVYV+QP+ ++++G ENKVY+L+KA YGLKQ+PRAWY KIDS
Sbjct: 922 PVYQFDVKSAFLNGDLEEEVYVSQPQGFMITGNENKVYKLRKALYGLKQAPRAWYSKIDS 981
Query: 141 YFLESGFKTSPNEPTWYVKKQGKSKFLVVCIYVDDTRYIGSSEAVI 4
+F SGF+ S NEPT Y+KKQG +FL+VC+YVDD YIGSS++++
Sbjct: 982 FFQGSGFRRSDNEPTLYLKKQGTDEFLLVCLYVDDMIYIGSSKSLV 1027
Score = 65.1 bits (157), Expect(2) = 6e-48
Identities = 29/38 (76%), Positives = 35/38 (92%)
Frame = -1
Query: 454 KYNSDEEVQKYKARLVAKGYSQEQGVDFEETFAPVACF 341
KYN+D +QK+KARLVAKGYSQ+QGVDF+ETF+PVA F
Sbjct: 869 KYNADGSIQKHKARLVAKGYSQQQGVDFDETFSPVARF 906
>gb|ABW74566.1| integrase [Boechera divaricarpa]
Length = 1165
Score = 146 bits (369), Expect(2) = 4e-45
Identities = 68/107 (63%), Positives = 83/107 (77%)
Frame = -2
Query: 324 WPVYQPEVMSVFLNGELEEEVYVAQPKVYVVSGEENKVYRLKKAPYGLKQSPRAWYYKID 145
WP+YQ +V S FLNGEL EEVYV QP+ ++V G E VYRL KA YGLKQ+PRAWY KID
Sbjct: 752 WPIYQFDVKSAFLNGELREEVYVDQPEGFIVEGREGFVYRLYKALYGLKQAPRAWYNKID 811
Query: 144 SYFLESGFKTSPNEPTWYVKKQGKSKFLVVCIYVDDTRYIGSSEAVI 4
SYF E+GF+ S +EPT Y+KKQG LVVC+YVDD Y+GSS +++
Sbjct: 812 SYFAETGFERSKSEPTLYIKKQGAGDILVVCLYVDDMIYMGSSASLV 858
Score = 60.8 bits (146), Expect(2) = 4e-45
Identities = 26/38 (68%), Positives = 33/38 (86%)
Frame = -1
Query: 454 KYNSDEEVQKYKARLVAKGYSQEQGVDFEETFAPVACF 341
KY +D+ +QKYKARLV KGY+QE GVD+E+TF+PVA F
Sbjct: 700 KYQADDNIQKYKARLVVKGYAQEYGVDYEKTFSPVARF 737
>emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera]
Length = 1424
Score = 139 bits (349), Expect(2) = 8e-42
Identities = 63/108 (58%), Positives = 84/108 (77%)
Frame = -2
Query: 324 WPVYQPEVMSVFLNGELEEEVYVAQPKVYVVSGEENKVYRLKKAPYGLKQSPRAWYYKID 145
W +YQ ++ S FLNG+LE E+YV QP+ +VV GEENKVY+LKKA YGLKQ+PRAWY +ID
Sbjct: 1011 WLLYQLDIKSAFLNGKLEXEIYVEQPQGFVVDGEENKVYKLKKALYGLKQAPRAWYTQID 1070
Query: 144 SYFLESGFKTSPNEPTWYVKKQGKSKFLVVCIYVDDTRYIGSSEAVIE 1
SYF+E+GF S +EPT YVK + S+ L+V +YVDD + G+ E ++E
Sbjct: 1071 SYFIENGFIRSKSEPTLYVKSKDNSQILIVALYVDDLIFTGNDEKMVE 1118
Score = 57.4 bits (137), Expect(2) = 8e-42
Identities = 27/36 (75%), Positives = 30/36 (83%)
Frame = -1
Query: 454 KYNSDEEVQKYKARLVAKGYSQEQGVDFEETFAPVA 347
KY+SD VQ+ KARLVAKGYSQ+ G DF ETFAPVA
Sbjct: 959 KYHSDGRVQRLKARLVAKGYSQQPGXDFHETFAPVA 994
>emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]
Length = 1430
Score = 139 bits (351), Expect(2) = 1e-41
Identities = 64/107 (59%), Positives = 84/107 (78%)
Frame = -2
Query: 324 WPVYQPEVMSVFLNGELEEEVYVAQPKVYVVSGEENKVYRLKKAPYGLKQSPRAWYYKID 145
W VYQ +V S FLNGEL EEVY +QP+ ++V +E VYRLK A YGLKQ+PRAWY KID
Sbjct: 1021 WCVYQFDVKSAFLNGELVEEVYXSQPEGFIVPDKEEHVYRLKXALYGLKQAPRAWYSKID 1080
Query: 144 SYFLESGFKTSPNEPTWYVKKQGKSKFLVVCIYVDDTRYIGSSEAVI 4
SYF+E+GF+ S +EP Y+K+QGK+ L++C+YVDD Y+GSS ++I
Sbjct: 1081 SYFVENGFEKSKSEPNLYLKRQGKNDLLIICLYVDDMIYMGSSSSLI 1127
Score = 56.2 bits (134), Expect(2) = 1e-41
Identities = 24/38 (63%), Positives = 33/38 (86%)
Frame = -1
Query: 454 KYNSDEEVQKYKARLVAKGYSQEQGVDFEETFAPVACF 341
KY +D +QK+KARLVAKGY+Q+ GVD+++TF+PVA F
Sbjct: 969 KYLADGSIQKHKARLVAKGYAQQHGVDYDDTFSPVARF 1006
>emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]
Length = 1472
Score = 139 bits (349), Expect(2) = 2e-41
Identities = 64/107 (59%), Positives = 84/107 (78%)
Frame = -2
Query: 324 WPVYQPEVMSVFLNGELEEEVYVAQPKVYVVSGEENKVYRLKKAPYGLKQSPRAWYYKID 145
W YQ +V S FLNGEL EEVYV+Q + ++V +E VYRLKKA YGLKQ+PRAWY KID
Sbjct: 850 WCXYQFDVKSAFLNGELVEEVYVSQXEGFIVPXKEEHVYRLKKALYGLKQAPRAWYSKID 909
Query: 144 SYFLESGFKTSPNEPTWYVKKQGKSKFLVVCIYVDDTRYIGSSEAVI 4
SYF+E+GF+ S +EP Y+K+QGK+ L++C+YVDD Y+GSS ++I
Sbjct: 910 SYFVENGFERSKSEPNLYLKRQGKNDLLIICLYVDDMIYMGSSSSLI 956
Score = 56.2 bits (134), Expect(2) = 2e-41
Identities = 24/38 (63%), Positives = 33/38 (86%)
Frame = -1
Query: 454 KYNSDEEVQKYKARLVAKGYSQEQGVDFEETFAPVACF 341
KY +D +QK+KARLVAKGY+Q+ GVD+++TF+PVA F
Sbjct: 798 KYLADGSIQKHKARLVAKGYAQQHGVDYDDTFSPVARF 835
>gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108711922|gb|ABF99717.1| retrotransposon protein,
putative, unclassified [Oryza sativa Japonica Group]
Length = 1335
Score = 128 bits (322), Expect(2) = 6e-38
Identities = 61/108 (56%), Positives = 80/108 (74%)
Frame = -2
Query: 324 WPVYQPEVMSVFLNGELEEEVYVAQPKVYVVSGEENKVYRLKKAPYGLKQSPRAWYYKID 145
W +YQ +V S FLNG L+EE+YV QP+ + V G ENKV+RLKKA YGLKQ+PRAWY +ID
Sbjct: 948 WKIYQLDVKSAFLNGYLDEEIYVEQPEGFSVQGGENKVFRLKKALYGLKQAPRAWYSQID 1007
Query: 144 SYFLESGFKTSPNEPTWYVKKQGKSKFLVVCIYVDDTRYIGSSEAVIE 1
YF++ GF S +EPT YV K G + L+V +YVDD Y G+SE +++
Sbjct: 1008 KYFIQKGFAKSISEPTLYVNKTG-TDILIVSLYVDDLIYTGNSEKMMQ 1054
Score = 54.7 bits (130), Expect(2) = 6e-38
Identities = 25/39 (64%), Positives = 30/39 (76%)
Frame = -1
Query: 463 YCPKYNSDEEVQKYKARLVAKGYSQEQGVDFEETFAPVA 347
Y K N D VQKYKARLVAKG+ Q+ G+D+ ET+APVA
Sbjct: 893 YKTKLNPDGSVQKYKARLVAKGFKQKPGIDYYETYAPVA 931
>gb|ABA99612.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1198
Score = 128 bits (322), Expect(2) = 6e-38
Identities = 61/108 (56%), Positives = 80/108 (74%)
Frame = -2
Query: 324 WPVYQPEVMSVFLNGELEEEVYVAQPKVYVVSGEENKVYRLKKAPYGLKQSPRAWYYKID 145
W +YQ +V S FLNG L+EE+YV QP+ + V G ENKV+RLKKA YGLKQ+PRAWY +ID
Sbjct: 811 WKIYQLDVKSAFLNGYLDEEIYVEQPEGFSVQGGENKVFRLKKALYGLKQAPRAWYSQID 870
Query: 144 SYFLESGFKTSPNEPTWYVKKQGKSKFLVVCIYVDDTRYIGSSEAVIE 1
YF++ GF S +EPT YV K G + L+V +YVDD Y G+SE +++
Sbjct: 871 KYFIQKGFAKSISEPTLYVNKTG-TDILIVSLYVDDLIYTGNSEKMMQ 917
Score = 54.7 bits (130), Expect(2) = 6e-38
Identities = 25/39 (64%), Positives = 30/39 (76%)
Frame = -1
Query: 463 YCPKYNSDEEVQKYKARLVAKGYSQEQGVDFEETFAPVA 347
Y K N D VQKYKARLVAKG+ Q+ G+D+ ET+APVA
Sbjct: 756 YKTKLNPDGSVQKYKARLVAKGFKQKPGIDYYETYAPVA 794
>gb|ABR16288.1| unknown [Picea sitchensis]
Length = 363
Score = 126 bits (316), Expect(2) = 2e-37
Identities = 61/102 (59%), Positives = 74/102 (72%)
Frame = -2
Query: 324 WPVYQPEVMSVFLNGELEEEVYVAQPKVYVVSGEENKVYRLKKAPYGLKQSPRAWYYKID 145
W VYQ +V S FLNG LEEEVYV QP Y V G+E+KVYRLKKA GLKQ+PRAWY KID
Sbjct: 87 WKVYQMDVKSAFLNGYLEEEVYVQQPPRYEVRGQEDKVYRLKKALNGLKQAPRAWYSKID 146
Query: 144 SYFLESGFKTSPNEPTWYVKKQGKSKFLVVCIYVDDTRYIGS 19
SY +++ F S +EPT Y K + + L+VC+YVDD Y G+
Sbjct: 147 SYMIKNEFIRSTSEPTLYTKVNEQGQILIVCLYVDDLIYTGN 188
Score = 55.5 bits (132), Expect(2) = 2e-37
Identities = 25/39 (64%), Positives = 32/39 (82%)
Frame = -1
Query: 463 YCPKYNSDEEVQKYKARLVAKGYSQEQGVDFEETFAPVA 347
Y KY ++ E+ K+KARLVAKG++QE GVD+ ETFAPVA
Sbjct: 32 YKTKYKANGELDKHKARLVAKGFAQEYGVDYNETFAPVA 70
>gb|ABA95820.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1142
Score = 127 bits (318), Expect(2) = 2e-37
Identities = 60/108 (55%), Positives = 79/108 (73%)
Frame = -2
Query: 324 WPVYQPEVMSVFLNGELEEEVYVAQPKVYVVSGEENKVYRLKKAPYGLKQSPRAWYYKID 145
W +YQ +V S FLNG L+EE+YV QP+ + V G ENKV+RLKKA YGLKQ+PR WY +ID
Sbjct: 738 WKIYQLDVKSAFLNGYLDEEIYVEQPEGFSVQGGENKVFRLKKALYGLKQAPRVWYSQID 797
Query: 144 SYFLESGFKTSPNEPTWYVKKQGKSKFLVVCIYVDDTRYIGSSEAVIE 1
YF++ GF S +EPT YV K G + L+V +YVDD Y G+SE +++
Sbjct: 798 KYFIQKGFAKSISEPTLYVNKTG-TDILIVSLYVDDLIYTGNSEKMMQ 844
Score = 54.3 bits (129), Expect(2) = 2e-37
Identities = 25/39 (64%), Positives = 30/39 (76%)
Frame = -1
Query: 463 YCPKYNSDEEVQKYKARLVAKGYSQEQGVDFEETFAPVA 347
Y K N D VQKYKARLVAKG+ Q+ G+D+ ET+APVA
Sbjct: 683 YKTKLNLDGSVQKYKARLVAKGFKQKPGIDYYETYAPVA 721
>gb|AFK88551.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 120 bits (301), Expect(2) = 4e-37
Identities = 57/108 (52%), Positives = 74/108 (68%)
Frame = -2
Query: 324 WPVYQPEVMSVFLNGELEEEVYVAQPKVYVVSGEENKVYRLKKAPYGLKQSPRAWYYKID 145
W ++Q +V S FLNG+LEEEVY+ QP+ Y+V GEENKV RL KA YGLKQ+PRAW +ID
Sbjct: 101 WKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEENKVLRLNKALYGLKQAPRAWNTRID 160
Query: 144 SYFLESGFKTSPNEPTWYVKKQGKSKFLVVCIYVDDTRYIGSSEAVIE 1
YF E F P E Y+K Q K L+ C+YVDD + G++ ++ E
Sbjct: 161 KYFKEKDFTKCPYEHALYIKIQ-KDDILIACLYVDDLIFTGNNPSMFE 207
Score = 60.1 bits (144), Expect(2) = 4e-37
Identities = 27/40 (67%), Positives = 32/40 (80%)
Frame = -1
Query: 463 YCPKYNSDEEVQKYKARLVAKGYSQEQGVDFEETFAPVAC 344
Y K NS EV++YKARLVAKGYSQ G+D++E FAPVAC
Sbjct: 46 YKAKKNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVAC 85
>gb|AAT47077.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1136
Score = 128 bits (321), Expect(2) = 9e-37
Identities = 61/108 (56%), Positives = 80/108 (74%)
Frame = -2
Query: 324 WPVYQPEVMSVFLNGELEEEVYVAQPKVYVVSGEENKVYRLKKAPYGLKQSPRAWYYKID 145
W +YQ +V S FLNG L+EE+YV QP+ + V G ENKV+RLKKA YGLKQ+PRAWY +ID
Sbjct: 732 WKIYQLDVKSAFLNGYLDEEIYVEQPERFSVQGGENKVFRLKKALYGLKQAPRAWYSQID 791
Query: 144 SYFLESGFKTSPNEPTWYVKKQGKSKFLVVCIYVDDTRYIGSSEAVIE 1
YF++ GF S +EP YVKK G + L+V +YVDD Y G+SE +++
Sbjct: 792 KYFIQKGFAKSISEPILYVKKTG-TDILIVSLYVDDLIYTGNSEKLMQ 838
Score = 51.2 bits (121), Expect(2) = 9e-37
Identities = 24/39 (61%), Positives = 29/39 (74%)
Frame = -1
Query: 463 YCPKYNSDEEVQKYKARLVAKGYSQEQGVDFEETFAPVA 347
Y K N D VQKYKARLVAKG+ Q+ G+D+ ET+A VA
Sbjct: 677 YKTKLNPDGSVQKYKARLVAKGFKQKPGIDYYETYAHVA 715
>gb|AFK88552.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 119 bits (299), Expect(2) = 3e-36
Identities = 57/108 (52%), Positives = 74/108 (68%)
Frame = -2
Query: 324 WPVYQPEVMSVFLNGELEEEVYVAQPKVYVVSGEENKVYRLKKAPYGLKQSPRAWYYKID 145
W ++Q +V S FLNG+LEEEVY+ QP+ Y+V GEENKV RL KA YGLKQ+PRAW +ID
Sbjct: 101 WKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEENKVLRLNKALYGLKQAPRAWNTRID 160
Query: 144 SYFLESGFKTSPNEPTWYVKKQGKSKFLVVCIYVDDTRYIGSSEAVIE 1
YF E F P E Y+K Q K L+ C+YVDD + G++ ++ E
Sbjct: 161 KYFKEKDFIKCPYEHALYIKIQ-KDDILIACLYVDDLIFTGNNPSMFE 207
Score = 58.2 bits (139), Expect(2) = 3e-36
Identities = 26/40 (65%), Positives = 31/40 (77%)
Frame = -1
Query: 463 YCPKYNSDEEVQKYKARLVAKGYSQEQGVDFEETFAPVAC 344
Y K N EV++YKARLVAKGYSQ G+D++E FAPVAC
Sbjct: 46 YKAKKNPKGEVERYKARLVAKGYSQRAGIDYDEVFAPVAC 85
>emb|CAN74303.1| hypothetical protein VITISV_032980 [Vitis vinifera]
Length = 1283
Score = 123 bits (309), Expect(2) = 3e-36
Identities = 56/108 (51%), Positives = 76/108 (70%)
Frame = -2
Query: 324 WPVYQPEVMSVFLNGELEEEVYVAQPKVYVVSGEENKVYRLKKAPYGLKQSPRAWYYKID 145
WP++Q +V S FL+G LEE+V+V QP Y+ E+KVYRLKKA YGLKQ+PRAWY +I+
Sbjct: 884 WPIFQLDVXSAFLHGNLEEQVFVDQPPGYIKVKNEHKVYRLKKALYGLKQAPRAWYSRIE 943
Query: 144 SYFLESGFKTSPNEPTWYVKKQGKSKFLVVCIYVDDTRYIGSSEAVIE 1
+YFL+ GF+ P E T +VK K L+VC+YVDD + G+ + E
Sbjct: 944 AYFLKEGFQKCPYEHTLFVKVSNGGKMLIVCLYVDDIIFTGNDSVMFE 991
Score = 53.9 bits (128), Expect(2) = 3e-36
Identities = 26/39 (66%), Positives = 29/39 (74%)
Frame = -1
Query: 463 YCPKYNSDEEVQKYKARLVAKGYSQEQGVDFEETFAPVA 347
Y K + EV KYKARLVAKGY QE GVD++E FAPVA
Sbjct: 829 YKTKLKENGEVDKYKARLVAKGYKQEFGVDYKEVFAPVA 867
>gb|AGH20679.1| reverse transcriptase, partial [Raphanus sativus]
Length = 315
Score = 120 bits (300), Expect(2) = 6e-36
Identities = 57/108 (52%), Positives = 75/108 (69%)
Frame = -2
Query: 324 WPVYQPEVMSVFLNGELEEEVYVAQPKVYVVSGEENKVYRLKKAPYGLKQSPRAWYYKID 145
W ++Q +V S FLNG+LEEEVY+ QP+ Y+V GEE+KV RLKKA YGLKQ+PRAW +ID
Sbjct: 101 WRIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRID 160
Query: 144 SYFLESGFKTSPNEPTWYVKKQGKSKFLVVCIYVDDTRYIGSSEAVIE 1
YF E GF P E Y+K Q + L+ C+YVDD + G++ + E
Sbjct: 161 KYFNEKGFIKCPYEHALYIKTQ-NNDILIACLYVDDLIFTGNNPIMFE 207
Score = 56.6 bits (135), Expect(2) = 6e-36
Identities = 26/39 (66%), Positives = 31/39 (79%)
Frame = -1
Query: 463 YCPKYNSDEEVQKYKARLVAKGYSQEQGVDFEETFAPVA 347
Y K NS EV++YKARLVAKGYSQ G+D++E FAPVA
Sbjct: 46 YKAKKNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVA 84
>gb|AFK88548.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 120 bits (300), Expect(2) = 6e-36
Identities = 57/108 (52%), Positives = 74/108 (68%)
Frame = -2
Query: 324 WPVYQPEVMSVFLNGELEEEVYVAQPKVYVVSGEENKVYRLKKAPYGLKQSPRAWYYKID 145
W ++Q +V S FLNG+ EEEVY+ QP+ Y+V GEENKV RLKKA YGLKQ+PRAW +ID
Sbjct: 101 WKIHQMDVKSAFLNGDFEEEVYIEQPQGYIVKGEENKVLRLKKALYGLKQAPRAWNTRID 160
Query: 144 SYFLESGFKTSPNEPTWYVKKQGKSKFLVVCIYVDDTRYIGSSEAVIE 1
YF E F P E Y+K Q K L+ C+YVDD + G++ ++ E
Sbjct: 161 KYFKEKDFIKCPYEHALYIKIQ-KDDILIACLYVDDLIFTGNNPSMFE 207
Score = 56.6 bits (135), Expect(2) = 6e-36
Identities = 26/39 (66%), Positives = 31/39 (79%)
Frame = -1
Query: 463 YCPKYNSDEEVQKYKARLVAKGYSQEQGVDFEETFAPVA 347
Y K NS EV++YKARLVAKGYSQ G+D++E FAPVA
Sbjct: 46 YKAKKNSKGEVERYKARLVAKGYSQRTGIDYDEVFAPVA 84
>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
polyprotein, putative [Arabidopsis thaliana]
Length = 1320
Score = 119 bits (299), Expect(2) = 7e-36
Identities = 57/108 (52%), Positives = 75/108 (69%)
Frame = -2
Query: 324 WPVYQPEVMSVFLNGELEEEVYVAQPKVYVVSGEENKVYRLKKAPYGLKQSPRAWYYKID 145
W ++Q +V S FLNG+LEEEVY+ QP+ Y+V GEE+KV RLKKA YGLKQ+PRAW +ID
Sbjct: 908 WKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRID 967
Query: 144 SYFLESGFKTSPNEPTWYVKKQGKSKFLVVCIYVDDTRYIGSSEAVIE 1
YF E F P E Y+K Q K L+ C+YVDD + G++ ++ E
Sbjct: 968 KYFKEKDFIKCPYEHALYIKIQ-KEDILIACLYVDDLIFTGNNPSMFE 1014
Score = 56.6 bits (135), Expect(2) = 7e-36
Identities = 26/39 (66%), Positives = 31/39 (79%)
Frame = -1
Query: 463 YCPKYNSDEEVQKYKARLVAKGYSQEQGVDFEETFAPVA 347
Y K NS EV++YKARLVAKGYSQ G+D++E FAPVA
Sbjct: 853 YKAKKNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVA 891
>emb|CAN72600.1| hypothetical protein VITISV_036712 [Vitis vinifera]
Length = 1246
Score = 121 bits (303), Expect(2) = 7e-36
Identities = 55/107 (51%), Positives = 74/107 (69%)
Frame = -2
Query: 324 WPVYQPEVMSVFLNGELEEEVYVAQPKVYVVSGEENKVYRLKKAPYGLKQSPRAWYYKID 145
W +YQ +V S FLNGEL E+VYV QPK Y G E+KVY+L KA YGLKQ+PRAW+ +I+
Sbjct: 853 WTIYQLDVKSAFLNGELNEDVYVDQPKGYEKKGSEHKVYKLHKALYGLKQAPRAWFSRIE 912
Query: 144 SYFLESGFKTSPNEPTWYVKKQGKSKFLVVCIYVDDTRYIGSSEAVI 4
+YF+ GF+ PNE T + K+ K L+V IY+D+ Y + E +I
Sbjct: 913 AYFISEGFQKCPNEQTLFTKRSSAGKILIVSIYMDNLIYTSNDEDMI 959
Score = 55.1 bits (131), Expect(2) = 7e-36
Identities = 27/39 (69%), Positives = 30/39 (76%)
Frame = -1
Query: 463 YCPKYNSDEEVQKYKARLVAKGYSQEQGVDFEETFAPVA 347
Y K N EV KYKARLVAKGYSQ+QGVDF + +APVA
Sbjct: 798 YKTKLNELGEVDKYKARLVAKGYSQQQGVDFTKIYAPVA 836
>gb|AFK88549.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 119 bits (299), Expect(2) = 8e-36
Identities = 57/108 (52%), Positives = 75/108 (69%)
Frame = -2
Query: 324 WPVYQPEVMSVFLNGELEEEVYVAQPKVYVVSGEENKVYRLKKAPYGLKQSPRAWYYKID 145
W ++Q +V S FLNG+LEEEVY+ QP+ Y+V GEE+KV RLKKA YGLKQ+PRAW +ID
Sbjct: 101 WKIHQMDVKSTFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRID 160
Query: 144 SYFLESGFKTSPNEPTWYVKKQGKSKFLVVCIYVDDTRYIGSSEAVIE 1
YF E F P E Y+K Q K L+ C+YVDD + G++ ++ E
Sbjct: 161 KYFKEKDFIKCPYEHALYIKIQ-KDDILIACLYVDDLIFTGNNPSMFE 207
Score = 56.6 bits (135), Expect(2) = 8e-36
Identities = 26/39 (66%), Positives = 31/39 (79%)
Frame = -1
Query: 463 YCPKYNSDEEVQKYKARLVAKGYSQEQGVDFEETFAPVA 347
Y K NS EV++YKARLVAKGYSQ G+D++E FAPVA
Sbjct: 46 YKAKKNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVA 84
>gb|AFK88543.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 119 bits (299), Expect(2) = 8e-36
Identities = 57/108 (52%), Positives = 75/108 (69%)
Frame = -2
Query: 324 WPVYQPEVMSVFLNGELEEEVYVAQPKVYVVSGEENKVYRLKKAPYGLKQSPRAWYYKID 145
W ++Q +V S FLNG+LEEEVY+ QP+ Y+V GEE+KV RLKKA YGLKQ+PRAW +ID
Sbjct: 101 WKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRID 160
Query: 144 SYFLESGFKTSPNEPTWYVKKQGKSKFLVVCIYVDDTRYIGSSEAVIE 1
YF E F P E Y+K Q K L+ C+YVDD + G++ ++ E
Sbjct: 161 KYFKEKDFIKCPYEHALYIKIQ-KDDILIACLYVDDLIFTGNNPSMFE 207
Score = 56.6 bits (135), Expect(2) = 8e-36
Identities = 26/39 (66%), Positives = 31/39 (79%)
Frame = -1
Query: 463 YCPKYNSDEEVQKYKARLVAKGYSQEQGVDFEETFAPVA 347
Y K NS EV++YKARLVAKGYSQ G+D++E FAPVA
Sbjct: 46 YKAKKNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVA 84
>gb|AFK88542.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera] gi|389595484|gb|AFK88545.1| reverse
transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 119 bits (299), Expect(2) = 8e-36
Identities = 57/108 (52%), Positives = 75/108 (69%)
Frame = -2
Query: 324 WPVYQPEVMSVFLNGELEEEVYVAQPKVYVVSGEENKVYRLKKAPYGLKQSPRAWYYKID 145
W ++Q +V S FLNG+LEEEVY+ QP+ Y+V GEE+KV RLKKA YGLKQ+PRAW +ID
Sbjct: 101 WKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRID 160
Query: 144 SYFLESGFKTSPNEPTWYVKKQGKSKFLVVCIYVDDTRYIGSSEAVIE 1
YF E F P E Y+K Q K L+ C+YVDD + G++ ++ E
Sbjct: 161 KYFKEKDFIKCPYEHALYIKIQ-KDDILIACLYVDDLIFTGNNPSMFE 207
Score = 56.6 bits (135), Expect(2) = 8e-36
Identities = 26/39 (66%), Positives = 31/39 (79%)
Frame = -1
Query: 463 YCPKYNSDEEVQKYKARLVAKGYSQEQGVDFEETFAPVA 347
Y K NS EV++YKARLVAKGYSQ G+D++E FAPVA
Sbjct: 46 YKAKKNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVA 84