BLASTX nr result
ID: Achyranthes23_contig00026163
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Achyranthes23_contig00026163
(1012 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003595339.1| U6 snRNA-associated Sm-like protein LSm1 [Me... 171 3e-40
gb|AFK42388.1| unknown [Medicago truncatula] 170 9e-40
gb|EOY27290.1| Small nuclear ribonucleoprotein family protein is... 169 1e-39
ref|XP_004488097.1| PREDICTED: probable U6 snRNA-associated Sm-l... 167 8e-39
ref|XP_004287651.1| PREDICTED: U6 snRNA-associated Sm-like prote... 166 2e-38
ref|XP_006357408.1| PREDICTED: U6 snRNA-associated Sm-like prote... 165 3e-38
ref|XP_004241918.1| PREDICTED: U6 snRNA-associated Sm-like prote... 165 3e-38
ref|XP_002516250.1| lsm1, putative [Ricinus communis] gi|2235447... 164 4e-38
ref|XP_006598838.1| PREDICTED: probable U6 snRNA-associated Sm-l... 163 9e-38
ref|NP_001237465.1| uncharacterized protein LOC100306352 [Glycin... 163 9e-38
ref|XP_002271476.1| PREDICTED: U6 snRNA-associated Sm-like prote... 163 9e-38
gb|ESW07414.1| hypothetical protein PHAVU_010G127900g [Phaseolus... 162 3e-37
ref|XP_003633086.1| PREDICTED: U6 snRNA-associated Sm-like prote... 162 3e-37
ref|XP_002532727.1| lsm1, putative [Ricinus communis] gi|2235275... 162 3e-37
gb|EOY30224.1| Small nuclear ribonucleoprotein family protein is... 161 3e-37
gb|EOY30223.1| Small nuclear ribonucleoprotein family protein is... 161 3e-37
ref|XP_006452830.1| hypothetical protein CICLE_v10009897mg [Citr... 161 4e-37
dbj|BAK06198.1| predicted protein [Hordeum vulgare subsp. vulgar... 161 4e-37
ref|XP_002331181.1| predicted protein [Populus trichocarpa] gi|5... 161 4e-37
ref|XP_006652331.1| PREDICTED: probable U6 snRNA-associated Sm-l... 160 7e-37
>ref|XP_003595339.1| U6 snRNA-associated Sm-like protein LSm1 [Medicago truncatula]
gi|355484387|gb|AES65590.1| U6 snRNA-associated Sm-like
protein LSm1 [Medicago truncatula]
Length = 128
Score = 171 bits (434), Expect = 3e-40
Identities = 83/92 (90%), Positives = 89/92 (96%)
Frame = +2
Query: 251 LRSFDQFANVVLEGACDRVIVGDLYCDIPLGLYVIRGENVVLIGELAIDKEELPPHMTCV 430
LRSFDQFANVVLEGAC+RVIVGDLYCD+PLGLYVIRGENVVLIGEL + KEELPPHMTCV
Sbjct: 37 LRSFDQFANVVLEGACERVIVGDLYCDVPLGLYVIRGENVVLIGELDLGKEELPPHMTCV 96
Query: 431 SEAEIRQAQKAEGEASDLKGTMRKRMEFLDFD 526
SEA+IR+AQKAE +ASDLKGTMRKRMEFLDFD
Sbjct: 97 SEADIRKAQKAERDASDLKGTMRKRMEFLDFD 128
>gb|AFK42388.1| unknown [Medicago truncatula]
Length = 128
Score = 170 bits (430), Expect = 9e-40
Identities = 82/92 (89%), Positives = 89/92 (96%)
Frame = +2
Query: 251 LRSFDQFANVVLEGACDRVIVGDLYCDIPLGLYVIRGENVVLIGELAIDKEELPPHMTCV 430
LRSFDQFANVVL+GAC+RVIVGDLYCD+PLGLYVIRGENVVLIGEL + KEELPPHMTCV
Sbjct: 37 LRSFDQFANVVLKGACERVIVGDLYCDVPLGLYVIRGENVVLIGELDLGKEELPPHMTCV 96
Query: 431 SEAEIRQAQKAEGEASDLKGTMRKRMEFLDFD 526
SEA+IR+AQKAE +ASDLKGTMRKRMEFLDFD
Sbjct: 97 SEADIRKAQKAERDASDLKGTMRKRMEFLDFD 128
>gb|EOY27290.1| Small nuclear ribonucleoprotein family protein isoform 1 [Theobroma
cacao]
Length = 128
Score = 169 bits (429), Expect = 1e-39
Identities = 83/93 (89%), Positives = 87/93 (93%)
Frame = +2
Query: 248 TLRSFDQFANVVLEGACDRVIVGDLYCDIPLGLYVIRGENVVLIGELAIDKEELPPHMTC 427
TLRSFDQFAN VLEGACDRVIVGDLYCDIPLGLYVIRGENVVLIGEL +++EELPPHMTC
Sbjct: 36 TLRSFDQFANAVLEGACDRVIVGDLYCDIPLGLYVIRGENVVLIGELDLEREELPPHMTC 95
Query: 428 VSEAEIRQAQKAEGEASDLKGTMRKRMEFLDFD 526
VS AEIR+AQKAE EA DLKGTMRKRMEFLD D
Sbjct: 96 VSAAEIRRAQKAEREARDLKGTMRKRMEFLDLD 128
>ref|XP_004488097.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm1-like
[Cicer arietinum]
Length = 128
Score = 167 bits (422), Expect = 8e-39
Identities = 81/92 (88%), Positives = 87/92 (94%)
Frame = +2
Query: 251 LRSFDQFANVVLEGACDRVIVGDLYCDIPLGLYVIRGENVVLIGELAIDKEELPPHMTCV 430
LRSFDQFANVVLEGAC+RVIVGDLYCD+PLGLYVIRGENVVLIGEL + KEELPPHM CV
Sbjct: 37 LRSFDQFANVVLEGACERVIVGDLYCDVPLGLYVIRGENVVLIGELDLGKEELPPHMICV 96
Query: 431 SEAEIRQAQKAEGEASDLKGTMRKRMEFLDFD 526
SEA+IR+AQKAE +ASDLKG MRKRMEFLDFD
Sbjct: 97 SEADIRKAQKAERDASDLKGMMRKRMEFLDFD 128
>ref|XP_004287651.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Fragaria
vesca subsp. vesca]
Length = 128
Score = 166 bits (419), Expect = 2e-38
Identities = 81/92 (88%), Positives = 88/92 (95%)
Frame = +2
Query: 251 LRSFDQFANVVLEGACDRVIVGDLYCDIPLGLYVIRGENVVLIGELAIDKEELPPHMTCV 430
LRSFDQFANVVLEGAC+RVIVGDLYCDIPLGLYVIRGENVVLIGEL ++KEELPPHMT V
Sbjct: 37 LRSFDQFANVVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELELNKEELPPHMTLV 96
Query: 431 SEAEIRQAQKAEGEASDLKGTMRKRMEFLDFD 526
EAEI++AQKAE +ASDLKG+MRKRMEFLDFD
Sbjct: 97 PEAEIKRAQKAERDASDLKGSMRKRMEFLDFD 128
>ref|XP_006357408.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Solanum
tuberosum]
Length = 128
Score = 165 bits (417), Expect = 3e-38
Identities = 80/93 (86%), Positives = 87/93 (93%)
Frame = +2
Query: 248 TLRSFDQFANVVLEGACDRVIVGDLYCDIPLGLYVIRGENVVLIGELAIDKEELPPHMTC 427
TLRSFDQFAN VLEGAC+RVIVG++YCDIPLGLY+IRGENVVLIGEL +DKEELPPHMT
Sbjct: 36 TLRSFDQFANAVLEGACERVIVGEIYCDIPLGLYIIRGENVVLIGELDVDKEELPPHMTR 95
Query: 428 VSEAEIRQAQKAEGEASDLKGTMRKRMEFLDFD 526
V EAEIR+AQKAE EA+DLKGTMRKRMEFLD D
Sbjct: 96 VPEAEIRRAQKAEREATDLKGTMRKRMEFLDMD 128
>ref|XP_004241918.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Solanum
lycopersicum]
Length = 128
Score = 165 bits (417), Expect = 3e-38
Identities = 80/93 (86%), Positives = 87/93 (93%)
Frame = +2
Query: 248 TLRSFDQFANVVLEGACDRVIVGDLYCDIPLGLYVIRGENVVLIGELAIDKEELPPHMTC 427
TLRSFDQFAN VLEGAC+RVIVG++YCDIPLGLY+IRGENVVLIGEL +DKEELPPHMT
Sbjct: 36 TLRSFDQFANAVLEGACERVIVGEIYCDIPLGLYIIRGENVVLIGELDVDKEELPPHMTR 95
Query: 428 VSEAEIRQAQKAEGEASDLKGTMRKRMEFLDFD 526
V EAEIR+AQKAE EA+DLKGTMRKRMEFLD D
Sbjct: 96 VPEAEIRRAQKAEREATDLKGTMRKRMEFLDMD 128
>ref|XP_002516250.1| lsm1, putative [Ricinus communis] gi|223544736|gb|EEF46252.1| lsm1,
putative [Ricinus communis]
Length = 128
Score = 164 bits (416), Expect = 4e-38
Identities = 81/92 (88%), Positives = 88/92 (95%)
Frame = +2
Query: 251 LRSFDQFANVVLEGACDRVIVGDLYCDIPLGLYVIRGENVVLIGELAIDKEELPPHMTCV 430
LRSFDQFANVVLEGAC+RVIVGDLYCDI LGLYVIRGENVVLIGEL ++KEELP HMTCV
Sbjct: 37 LRSFDQFANVVLEGACERVIVGDLYCDILLGLYVIRGENVVLIGELDLEKEELPSHMTCV 96
Query: 431 SEAEIRQAQKAEGEASDLKGTMRKRMEFLDFD 526
SEAEI++AQKAE EA+DLKG+MRKRMEFLDFD
Sbjct: 97 SEAEIKRAQKAEREATDLKGSMRKRMEFLDFD 128
>ref|XP_006598838.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm1-like
[Glycine max]
Length = 95
Score = 163 bits (413), Expect = 9e-38
Identities = 81/93 (87%), Positives = 87/93 (93%)
Frame = +2
Query: 248 TLRSFDQFANVVLEGACDRVIVGDLYCDIPLGLYVIRGENVVLIGELAIDKEELPPHMTC 427
TLRSFDQFAN VLEGAC+RVIVGDLYCDIPLGLYVIRGENVVLIGEL +++EELP HMT
Sbjct: 3 TLRSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDLEREELPEHMTR 62
Query: 428 VSEAEIRQAQKAEGEASDLKGTMRKRMEFLDFD 526
VS AEI++AQKAE EASDLKGTMRKRMEFLDFD
Sbjct: 63 VSTAEIKRAQKAEREASDLKGTMRKRMEFLDFD 95
>ref|NP_001237465.1| uncharacterized protein LOC100306352 [Glycine max]
gi|255628281|gb|ACU14485.1| unknown [Glycine max]
gi|561008464|gb|ESW07413.1| hypothetical protein
PHAVU_010G127800g [Phaseolus vulgaris]
Length = 128
Score = 163 bits (413), Expect = 9e-38
Identities = 81/93 (87%), Positives = 87/93 (93%)
Frame = +2
Query: 248 TLRSFDQFANVVLEGACDRVIVGDLYCDIPLGLYVIRGENVVLIGELAIDKEELPPHMTC 427
TLRSFDQFAN VLEGAC+RVIVGDLYCDIPLGLYVIRGENVVLIGEL +++EELP HMT
Sbjct: 36 TLRSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDLEREELPEHMTR 95
Query: 428 VSEAEIRQAQKAEGEASDLKGTMRKRMEFLDFD 526
VS AEI++AQKAE EASDLKGTMRKRMEFLDFD
Sbjct: 96 VSTAEIKRAQKAEREASDLKGTMRKRMEFLDFD 128
>ref|XP_002271476.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Vitis
vinifera] gi|147803430|emb|CAN62239.1| hypothetical
protein VITISV_033727 [Vitis vinifera]
gi|297742980|emb|CBI35847.3| unnamed protein product
[Vitis vinifera]
Length = 128
Score = 163 bits (413), Expect = 9e-38
Identities = 81/92 (88%), Positives = 86/92 (93%)
Frame = +2
Query: 251 LRSFDQFANVVLEGACDRVIVGDLYCDIPLGLYVIRGENVVLIGELAIDKEELPPHMTCV 430
LRSFDQFAN VLEGAC+RVIVGDLYCDIPLGLYVIRGENVVLIGEL ++KEELPPHMT V
Sbjct: 37 LRSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDLEKEELPPHMTRV 96
Query: 431 SEAEIRQAQKAEGEASDLKGTMRKRMEFLDFD 526
S AEI++AQKAE EASDLKGTMRKRMEFLD D
Sbjct: 97 SAAEIKRAQKAEREASDLKGTMRKRMEFLDLD 128
>gb|ESW07414.1| hypothetical protein PHAVU_010G127900g [Phaseolus vulgaris]
Length = 128
Score = 162 bits (409), Expect = 3e-37
Identities = 80/93 (86%), Positives = 87/93 (93%)
Frame = +2
Query: 248 TLRSFDQFANVVLEGACDRVIVGDLYCDIPLGLYVIRGENVVLIGELAIDKEELPPHMTC 427
TLRSFDQFAN VLEGAC+RVIVG+LYCDIPLGLYVIRGENVVLIGEL +++EELP HMT
Sbjct: 36 TLRSFDQFANAVLEGACERVIVGELYCDIPLGLYVIRGENVVLIGELDLEREELPEHMTR 95
Query: 428 VSEAEIRQAQKAEGEASDLKGTMRKRMEFLDFD 526
VS AEI++AQKAE EASDLKGTMRKRMEFLDFD
Sbjct: 96 VSTAEIKRAQKAEREASDLKGTMRKRMEFLDFD 128
>ref|XP_003633086.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Vitis
vinifera] gi|297738539|emb|CBI27784.3| unnamed protein
product [Vitis vinifera]
Length = 128
Score = 162 bits (409), Expect = 3e-37
Identities = 78/92 (84%), Positives = 86/92 (93%)
Frame = +2
Query: 251 LRSFDQFANVVLEGACDRVIVGDLYCDIPLGLYVIRGENVVLIGELAIDKEELPPHMTCV 430
LRSFDQFAN VLEGAC+R IVGD+YCDIPLGLYVIRGENVVL+GEL +DKEELPPHMT V
Sbjct: 37 LRSFDQFANAVLEGACERAIVGDIYCDIPLGLYVIRGENVVLLGELDLDKEELPPHMTRV 96
Query: 431 SEAEIRQAQKAEGEASDLKGTMRKRMEFLDFD 526
EAEI++AQKAE EA+DLKG+MRKRMEFLDFD
Sbjct: 97 PEAEIKRAQKAEREATDLKGSMRKRMEFLDFD 128
>ref|XP_002532727.1| lsm1, putative [Ricinus communis] gi|223527535|gb|EEF29658.1| lsm1,
putative [Ricinus communis]
Length = 128
Score = 162 bits (409), Expect = 3e-37
Identities = 79/92 (85%), Positives = 86/92 (93%)
Frame = +2
Query: 251 LRSFDQFANVVLEGACDRVIVGDLYCDIPLGLYVIRGENVVLIGELAIDKEELPPHMTCV 430
LRSFDQFAN VLEGAC+RVIVGDLYCDIPLGLY+IRGENVVLIGEL ++KEELPPHMT V
Sbjct: 37 LRSFDQFANAVLEGACERVIVGDLYCDIPLGLYIIRGENVVLIGELDLEKEELPPHMTRV 96
Query: 431 SEAEIRQAQKAEGEASDLKGTMRKRMEFLDFD 526
S AEIR+AQKAE +A+DLKGTMRKRMEFLD D
Sbjct: 97 SAAEIRRAQKAERDATDLKGTMRKRMEFLDLD 128
>gb|EOY30224.1| Small nuclear ribonucleoprotein family protein isoform 2, partial
[Theobroma cacao]
Length = 114
Score = 161 bits (408), Expect = 3e-37
Identities = 80/92 (86%), Positives = 87/92 (94%)
Frame = +2
Query: 251 LRSFDQFANVVLEGACDRVIVGDLYCDIPLGLYVIRGENVVLIGELAIDKEELPPHMTCV 430
LRSFDQFANVVLEGAC+RVIVGDLYCDIPLGLYVIRGENVVLIGEL ++KEELP HMT V
Sbjct: 23 LRSFDQFANVVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDLEKEELPSHMTPV 82
Query: 431 SEAEIRQAQKAEGEASDLKGTMRKRMEFLDFD 526
S AEI++AQKAE EA+DLKG+MRKRMEFLDFD
Sbjct: 83 SAAEIKRAQKAEREATDLKGSMRKRMEFLDFD 114
>gb|EOY30223.1| Small nuclear ribonucleoprotein family protein isoform 1 [Theobroma
cacao]
Length = 128
Score = 161 bits (408), Expect = 3e-37
Identities = 80/92 (86%), Positives = 87/92 (94%)
Frame = +2
Query: 251 LRSFDQFANVVLEGACDRVIVGDLYCDIPLGLYVIRGENVVLIGELAIDKEELPPHMTCV 430
LRSFDQFANVVLEGAC+RVIVGDLYCDIPLGLYVIRGENVVLIGEL ++KEELP HMT V
Sbjct: 37 LRSFDQFANVVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDLEKEELPSHMTPV 96
Query: 431 SEAEIRQAQKAEGEASDLKGTMRKRMEFLDFD 526
S AEI++AQKAE EA+DLKG+MRKRMEFLDFD
Sbjct: 97 SAAEIKRAQKAEREATDLKGSMRKRMEFLDFD 128
>ref|XP_006452830.1| hypothetical protein CICLE_v10009897mg [Citrus clementina]
gi|557556056|gb|ESR66070.1| hypothetical protein
CICLE_v10009897mg [Citrus clementina]
Length = 128
Score = 161 bits (407), Expect = 4e-37
Identities = 78/92 (84%), Positives = 87/92 (94%)
Frame = +2
Query: 251 LRSFDQFANVVLEGACDRVIVGDLYCDIPLGLYVIRGENVVLIGELAIDKEELPPHMTCV 430
LRSFDQFANVVLEGAC+R+IVGDLYCDIPLGLYVIRGENVVLIGEL ++KEELP HMTCV
Sbjct: 37 LRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGELDLEKEELPAHMTCV 96
Query: 431 SEAEIRQAQKAEGEASDLKGTMRKRMEFLDFD 526
S AEI++AQKAE +A+ LKG+MRKRMEFLDFD
Sbjct: 97 STAEIKRAQKAEKDATVLKGSMRKRMEFLDFD 128
>dbj|BAK06198.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326503284|dbj|BAJ99267.1| predicted protein [Hordeum
vulgare subsp. vulgare]
Length = 128
Score = 161 bits (407), Expect = 4e-37
Identities = 79/93 (84%), Positives = 86/93 (92%)
Frame = +2
Query: 248 TLRSFDQFANVVLEGACDRVIVGDLYCDIPLGLYVIRGENVVLIGELAIDKEELPPHMTC 427
TL SFDQFANVVL+GAC+RVIVG+LYCD+PLGLYVIRGENVVLIGEL +K+ELP HMTC
Sbjct: 36 TLCSFDQFANVVLQGACERVIVGELYCDVPLGLYVIRGENVVLIGELDREKDELPSHMTC 95
Query: 428 VSEAEIRQAQKAEGEASDLKGTMRKRMEFLDFD 526
VSEAEIR A+KAE EA DLKGTMRKRMEFLDFD
Sbjct: 96 VSEAEIRTAEKAEKEARDLKGTMRKRMEFLDFD 128
>ref|XP_002331181.1| predicted protein [Populus trichocarpa]
gi|566149434|ref|XP_006369123.1| small nuclear
ribonucleoprotein [Populus trichocarpa]
gi|118489961|gb|ABK96777.1| unknown [Populus trichocarpa
x Populus deltoides] gi|550347483|gb|ERP65692.1| small
nuclear ribonucleoprotein [Populus trichocarpa]
Length = 128
Score = 161 bits (407), Expect = 4e-37
Identities = 80/92 (86%), Positives = 86/92 (93%)
Frame = +2
Query: 251 LRSFDQFANVVLEGACDRVIVGDLYCDIPLGLYVIRGENVVLIGELAIDKEELPPHMTCV 430
LRSFDQFAN VLEGAC+RVIVGDLYCDI LGLYVIRGENVVLIGEL +++EELPPHMT V
Sbjct: 37 LRSFDQFANAVLEGACERVIVGDLYCDIHLGLYVIRGENVVLIGELDLEREELPPHMTRV 96
Query: 431 SEAEIRQAQKAEGEASDLKGTMRKRMEFLDFD 526
SEAEIR+AQKAE EA+DLKGTMRKRMEFLD D
Sbjct: 97 SEAEIRRAQKAEREATDLKGTMRKRMEFLDLD 128
>ref|XP_006652331.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm1-like
[Oryza brachyantha]
Length = 128
Score = 160 bits (405), Expect = 7e-37
Identities = 78/93 (83%), Positives = 87/93 (93%)
Frame = +2
Query: 248 TLRSFDQFANVVLEGACDRVIVGDLYCDIPLGLYVIRGENVVLIGELAIDKEELPPHMTC 427
TL SFDQFANVVL+GAC+RVIVG+LYCD+PLGLYVIRGENVVLIGEL +K+ELP HMTC
Sbjct: 36 TLCSFDQFANVVLQGACERVIVGELYCDVPLGLYVIRGENVVLIGELDREKDELPAHMTC 95
Query: 428 VSEAEIRQAQKAEGEASDLKGTMRKRMEFLDFD 526
VSEAEIR+A+KAE EA DLKG+MRKRMEFLDFD
Sbjct: 96 VSEAEIRKAEKAEREARDLKGSMRKRMEFLDFD 128