BLASTX nr result

ID: Achyranthes23_contig00025806 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00025806
         (697 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P27684.1|PSRP5_SPIOL RecName: Full=50S ribosomal protein 5 al...   101   2e-19
gb|AAF72995.1|AF261940_1 ribosomal protein 5 precursor [Spinacia...   101   2e-19
gb|EXC30756.1| hypothetical protein L484_027931 [Morus notabilis]      65   2e-08
ref|XP_006339242.1| PREDICTED: 50S ribosomal protein 5, chloropl...    60   7e-07
ref|XP_004249337.1| PREDICTED: 50S ribosomal protein 5, chloropl...    60   7e-07
ref|XP_006364763.1| PREDICTED: 50S ribosomal protein 5 alpha, ch...    58   3e-06
ref|NP_001042743.1| Os01g0278900 [Oryza sativa Japonica Group] g...    57   6e-06
ref|XP_006364765.1| PREDICTED: 50S ribosomal protein 5 alpha, ch...    56   1e-05
ref|XP_006364764.1| PREDICTED: 50S ribosomal protein 5 alpha, ch...    56   1e-05
emb|CBI32867.3| unnamed protein product [Vitis vinifera]               56   1e-05
ref|XP_002283987.1| PREDICTED: 50S ribosomal protein 5, chloropl...    56   1e-05

>sp|P27684.1|PSRP5_SPIOL RecName: Full=50S ribosomal protein 5 alpha, chloroplastic;
           AltName: Full=50S ribosomal protein L40; AltName:
           Full=CL40; AltName: Full=Plastid-specific 50S ribosomal
           protein 5 alpha; Short=PSRP-5; Contains: RecName:
           Full=50S ribosomal protein 5 beta, chloroplastic;
           Contains: RecName: Full=50S ribosomal protein 5 gamma,
           chloroplastic; Flags: Precursor gi|170141|gb|AAA34044.1|
           ribosomal protein L40 [Spinacia oleracea]
          Length = 142

 Score =  101 bits (252), Expect = 2e-19
 Identities = 61/120 (50%), Positives = 71/120 (59%), Gaps = 6/120 (5%)
 Frame = +2

Query: 98  SSSFSIRLQNVSVALIPTLGHNLLADARVTAQRRCSIVAMAS------AGEAEDQSNDGE 259
           SSSF I+LQNVSVAL+P+ G  L+A   V AQ+R ++VAM S      AGE  DQS   E
Sbjct: 23  SSSFPIKLQNVSVALLPSFGQRLVAHGPVIAQKRGTVVAMVSAAAEETAGEDGDQSKVEE 82

Query: 260 DSISIQNLPLESKSQLKVEQKTXXXXXXXXXXXXXXXXXXXXXXXXGRWPPSKMKKLKNV 439
            +IS+QNLPLESK QLK+EQK                         G WPPSKMKKLKNV
Sbjct: 83  ANISVQNLPLESKLQLKLEQKIKMKMAKKIRLRRTGLCAKESLRKRGAWPPSKMKKLKNV 142


>gb|AAF72995.1|AF261940_1 ribosomal protein 5 precursor [Spinacia oleracea]
          Length = 142

 Score =  101 bits (252), Expect = 2e-19
 Identities = 61/120 (50%), Positives = 71/120 (59%), Gaps = 6/120 (5%)
 Frame = +2

Query: 98  SSSFSIRLQNVSVALIPTLGHNLLADARVTAQRRCSIVAMAS------AGEAEDQSNDGE 259
           SSSF I+LQNVSVAL+P+ G  L+A   V AQ+R ++VAM S      AGE  DQS   E
Sbjct: 23  SSSFPIKLQNVSVALLPSFGQRLVAHGPVIAQKRGTVVAMVSAAAEETAGEDGDQSKVEE 82

Query: 260 DSISIQNLPLESKSQLKVEQKTXXXXXXXXXXXXXXXXXXXXXXXXGRWPPSKMKKLKNV 439
            +IS+QNLPLESK QLK+EQK                         G WPPSKMKKLKNV
Sbjct: 83  ANISVQNLPLESKLQLKLEQKIKMKMAKKIRLRRNRLMRKRKLRKRGAWPPSKMKKLKNV 142


>gb|EXC30756.1| hypothetical protein L484_027931 [Morus notabilis]
          Length = 144

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 39/108 (36%), Positives = 51/108 (47%)
 Frame = +2

Query: 116 RLQNVSVALIPTLGHNLLADARVTAQRRCSIVAMASAGEAEDQSNDGEDSISIQNLPLES 295
           RLQ   + L P     +         R CS+V  AS+  +E  S+  E+++S+  LPLES
Sbjct: 37  RLQIKPIDLHPNSFSGVRLQMPFVVSRSCSVVVKASSESSEALSDGKEEAVSVDKLPLES 96

Query: 296 KSQLKVEQKTXXXXXXXXXXXXXXXXXXXXXXXXGRWPPSKMKKLKNV 439
           K Q ++EQK                         GRWPPSKMKKLKNV
Sbjct: 97  KLQERLEQKLKMKLAKKIRLRRKRLVRKRRLRKKGRWPPSKMKKLKNV 144


>ref|XP_006339242.1| PREDICTED: 50S ribosomal protein 5, chloroplastic-like [Solanum
           tuberosum]
          Length = 149

 Score = 60.1 bits (144), Expect = 7e-07
 Identities = 42/123 (34%), Positives = 54/123 (43%), Gaps = 7/123 (5%)
 Frame = +2

Query: 92  ALSSSFSIRLQNVSVALIPTLGHNLLADARVTAQRRCSIVAMASAG-------EAEDQSN 250
           A  +S S R  N  + L P    N    A    +RR +++A A+A          E    
Sbjct: 27  AFPASLSSRFCNNHITLTPKSYANGNIQAPFIFKRRGALIATAAADIDSVGSDNPEPSPE 86

Query: 251 DGEDSISIQNLPLESKSQLKVEQKTXXXXXXXXXXXXXXXXXXXXXXXXGRWPPSKMKKL 430
             E+S+ ++NLPLESK Q K+EQK                         GRWPPSKMKK 
Sbjct: 87  KNEESVPVENLPLESKLQEKLEQKMKMKLAKKIRLRRKRLVRKRHLRKKGRWPPSKMKKN 146

Query: 431 KNV 439
           KNV
Sbjct: 147 KNV 149


>ref|XP_004249337.1| PREDICTED: 50S ribosomal protein 5, chloroplastic-like [Solanum
           lycopersicum]
          Length = 149

 Score = 60.1 bits (144), Expect = 7e-07
 Identities = 43/123 (34%), Positives = 53/123 (43%), Gaps = 7/123 (5%)
 Frame = +2

Query: 92  ALSSSFSIRLQNVSVALIPTLGHNLLADARVTAQRRCSIVAMASAG-------EAEDQSN 250
           A  +S S R  N    L P    N    A    QRR +++A A+A          E    
Sbjct: 27  AFPASLSSRFCNNHFTLTPKSYANGYIQAPFIFQRRGALIATAAADIDSVGSDNPEPSPE 86

Query: 251 DGEDSISIQNLPLESKSQLKVEQKTXXXXXXXXXXXXXXXXXXXXXXXXGRWPPSKMKKL 430
             E+S+ ++NLPLESK Q K+EQK                         GRWPPSKMKK 
Sbjct: 87  KKEESVPVENLPLESKLQEKLEQKMKMKLAKKLRLRRKRLVRKRHLRKKGRWPPSKMKKN 146

Query: 431 KNV 439
           KNV
Sbjct: 147 KNV 149


>ref|XP_006364763.1| PREDICTED: 50S ribosomal protein 5 alpha, chloroplastic-like
           isoform X1 [Solanum tuberosum]
          Length = 142

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 42/120 (35%), Positives = 60/120 (50%), Gaps = 4/120 (3%)
 Frame = +2

Query: 92  ALSSSFSIRLQNVSVALIPTLGHNLLADARVTAQRRCSIVAMASA----GEAEDQSNDGE 259
           A + SFS R  N  +A  P    +    A    + R  ++A A++    G++++  +D E
Sbjct: 25  AFAHSFS-RFCNDPIAWQPKSHISYYIRAPFIFKERSVLIAKAASDIDSGDSDNLESD-E 82

Query: 260 DSISIQNLPLESKSQLKVEQKTXXXXXXXXXXXXXXXXXXXXXXXXGRWPPSKMKKLKNV 439
           +S+S+ NLPLESK QLK+EQK                         GRWPPSK+KK KNV
Sbjct: 83  ESLSVDNLPLESKLQLKLEQKMKMKLAKNIRLRRKKLVRKRRLRKKGRWPPSKLKKNKNV 142


>ref|NP_001042743.1| Os01g0278900 [Oryza sativa Japonica Group]
           gi|56783750|dbj|BAD81162.1| ribosomal protein,
           chloroplast -like [Oryza sativa Japonica Group]
           gi|113532274|dbj|BAF04657.1| Os01g0278900 [Oryza sativa
           Japonica Group] gi|125525398|gb|EAY73512.1| hypothetical
           protein OsI_01394 [Oryza sativa Indica Group]
           gi|215767780|dbj|BAH00009.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222618198|gb|EEE54330.1| hypothetical protein
           OsJ_01303 [Oryza sativa Japonica Group]
          Length = 143

 Score = 57.0 bits (136), Expect = 6e-06
 Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
 Frame = +2

Query: 173 DARVTAQRRCSIVAMASAGEAE---DQSNDGEDSISIQNLPLESKSQLKVEQKTXXXXXX 343
           +A  T +R  S+ A A AG  E   DQ  + + ++SI+ +PLE+K ++ +EQ+       
Sbjct: 52  NASFTKKRLVSVHASAEAGAEEAGTDQPEEPKPTVSIETMPLETKQKMIMEQRAKMKLAK 111

Query: 344 XXXXXXXXXXXXXXXXXXGRWPPSKMKKLKNV 439
                             GRWPPSKMKKLKNV
Sbjct: 112 KLRQRRRRLVQKRRLRKKGRWPPSKMKKLKNV 143


>ref|XP_006364765.1| PREDICTED: 50S ribosomal protein 5 alpha, chloroplastic-like
           isoform X3 [Solanum tuberosum]
          Length = 111

 Score = 56.2 bits (134), Expect = 1e-05
 Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
 Frame = +2

Query: 191 QRRCSIVAMASA----GEAEDQSNDGEDSISIQNLPLESKSQLKVEQKTXXXXXXXXXXX 358
           + R  ++A A++    G++++  +D E+S+S+ NLPLESK QLK+EQK            
Sbjct: 26  KERSVLIAKAASDIDSGDSDNLESD-EESLSVDNLPLESKLQLKLEQKMKMKLAKNIRLR 84

Query: 359 XXXXXXXXXXXXXGRWPPSKMKKLKNV 439
                        GRWPPSK+KK KNV
Sbjct: 85  RKKLVRKRRLRKKGRWPPSKLKKNKNV 111


>ref|XP_006364764.1| PREDICTED: 50S ribosomal protein 5 alpha, chloroplastic-like
           isoform X2 [Solanum tuberosum]
          Length = 122

 Score = 56.2 bits (134), Expect = 1e-05
 Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
 Frame = +2

Query: 191 QRRCSIVAMASA----GEAEDQSNDGEDSISIQNLPLESKSQLKVEQKTXXXXXXXXXXX 358
           + R  ++A A++    G++++  +D E+S+S+ NLPLESK QLK+EQK            
Sbjct: 37  KERSVLIAKAASDIDSGDSDNLESD-EESLSVDNLPLESKLQLKLEQKMKMKLAKNIRLR 95

Query: 359 XXXXXXXXXXXXXGRWPPSKMKKLKNV 439
                        GRWPPSK+KK KNV
Sbjct: 96  RKKLVRKRRLRKKGRWPPSKLKKNKNV 122


>emb|CBI32867.3| unnamed protein product [Vitis vinifera]
          Length = 124

 Score = 56.2 bits (134), Expect = 1e-05
 Identities = 37/95 (38%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
 Frame = +2

Query: 176 ARVTAQRRCSIVAMASA---GEAED----QSNDGEDSISIQNLPLESKSQLKVEQKTXXX 334
           A  T ++R  ++  AS+   G A D     S   ED + ++NLPLESK QLK+EQK    
Sbjct: 30  APFTVKQRDGVIVKASSDVDGVAPDGGETASEGEEDVVPVENLPLESKLQLKLEQKLRMK 89

Query: 335 XXXXXXXXXXXXXXXXXXXXXGRWPPSKMKKLKNV 439
                                GRWPPSKMKK KNV
Sbjct: 90  IAKKIRLRRKRLVRKRRMRKKGRWPPSKMKKNKNV 124


>ref|XP_002283987.1| PREDICTED: 50S ribosomal protein 5, chloroplastic-like [Vitis
           vinifera]
          Length = 144

 Score = 56.2 bits (134), Expect = 1e-05
 Identities = 37/95 (38%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
 Frame = +2

Query: 176 ARVTAQRRCSIVAMASA---GEAED----QSNDGEDSISIQNLPLESKSQLKVEQKTXXX 334
           A  T ++R  ++  AS+   G A D     S   ED + ++NLPLESK QLK+EQK    
Sbjct: 50  APFTVKQRDGVIVKASSDVDGVAPDGGETASEGEEDVVPVENLPLESKLQLKLEQKLRMK 109

Query: 335 XXXXXXXXXXXXXXXXXXXXXGRWPPSKMKKLKNV 439
                                GRWPPSKMKK KNV
Sbjct: 110 IAKKIRLRRKRLVRKRRMRKKGRWPPSKMKKNKNV 144


Top