BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00025416
         (1384 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006372225.1| tRNA pseudouridine synthase family protein [...   421   e-115
ref|XP_006372224.1| hypothetical protein POPTR_0018s14400g [Popu...   421   e-115
ref|XP_002331405.1| predicted protein [Populus trichocarpa]           421   e-115
ref|XP_002275354.2| PREDICTED: tRNA pseudouridine synthase A-lik...   419   e-114
ref|XP_002524161.1| pseudouridylate synthase, putative [Ricinus ...   417   e-114
gb|EMJ23926.1| hypothetical protein PRUPE_ppa006478mg [Prunus pe...   412   e-112
ref|XP_003532450.2| PREDICTED: tRNA pseudouridine synthase A, mi...   411   e-112
gb|EOY32187.1| Pseudouridine synthase isoform 2 [Theobroma cacao]     410   e-112
gb|EXC12817.1| tRNA pseudouridine synthase A [Morus notabilis]        408   e-111
emb|CBI33811.3| unnamed protein product [Vitis vinifera]              407   e-111
gb|EOY32186.1| Pseudouridine synthase isoform 1 [Theobroma cacao]     407   e-111
gb|ESW32209.1| hypothetical protein PHAVU_002G302500g [Phaseolus...   403   e-110
ref|XP_006474334.1| PREDICTED: uncharacterized protein LOC102622...   397   e-108
ref|XP_006453182.1| hypothetical protein CICLE_v10008288mg [Citr...   397   e-108
ref|XP_006850975.1| hypothetical protein AMTR_s00025p00208060 [A...   396   e-107
ref|XP_004299762.1| PREDICTED: tRNA pseudouridine synthase A-lik...   396   e-107
ref|XP_004503558.1| PREDICTED: tRNA pseudouridine synthase A-lik...   395   e-107
ref|XP_006283804.1| hypothetical protein CARUB_v10004903mg [Caps...   395   e-107
ref|XP_004166389.1| PREDICTED: tRNA pseudouridine synthase A-lik...   394   e-107
ref|XP_004137363.1| PREDICTED: tRNA pseudouridine synthase A-lik...   394   e-107

>ref|XP_006372225.1| tRNA pseudouridine synthase family protein [Populus trichocarpa]
            gi|550318756|gb|ERP50022.1| tRNA pseudouridine synthase
            family protein [Populus trichocarpa]
          Length = 457

 Score =  421 bits (1083), Expect = e-115
 Identities = 217/337 (64%), Positives = 260/337 (77%), Gaps = 4/337 (1%)
 Frame = -1

Query: 1342 DQSGRWARVTFRIVVSYHGEYFDGWQKQPGLNTVQGLVERSIGKFIDERKAQQRKDKGLP 1163
            D+SGRWARVTF+IV+SYHG  FDGWQKQPGLNTVQGLVE+S+G+F+DE+KAQQ K++  P
Sbjct: 126  DKSGRWARVTFKIVLSYHGGSFDGWQKQPGLNTVQGLVEKSLGRFVDEKKAQQLKEQCKP 185

Query: 1162 VEGMAVVAGRTDKGVTALNQVCSFYTWRKDVRNEEIEHAINFAAPGKLRVVSVSQVSRAF 983
            +EG A VAGRTDKGV+AL QVCSFYTWRKDV+  EIE AIN  APGK+RV S+S+VSRAF
Sbjct: 186  LEGCASVAGRTDKGVSALQQVCSFYTWRKDVKPHEIEDAINDVAPGKVRVESISEVSRAF 245

Query: 982  HPNFCAKWRRYLYIFPFEEVDCRDQNNNAIEETGNMGFDNSH---LLKRNVIVEDNAKDN 812
            HPNF AKWRRYLYIFP  +     +N   IE  G +   +SH     +RN   E  +++N
Sbjct: 246  HPNFSAKWRRYLYIFPLND----GENREEIEGEGGIENFSSHENCEKQRNECGELASEEN 301

Query: 811  IKNH-IDEKDELDGIKKPTNFSIARVDQLLRQLEGKLLSYKMFARDTKAARNTGPSTECF 635
            ++N  I ++DEL G KKP +FS+ RV+QLL+QLEGKLLSYKMFARDTKA+RN GP TECF
Sbjct: 302  VENSIISDEDELQGAKKPRSFSVCRVNQLLQQLEGKLLSYKMFARDTKASRNVGPPTECF 361

Query: 634  VYHARAAEAMIPSSNKDHVDASKVMCVELVANRFLRRMVRVLVATVVREAAAGADDDVLL 455
            +YHARA E  +PS   DH    +VMCVEL+ANRFLR+MVRVLVAT VREAAAGA +D LL
Sbjct: 362  LYHARATETRLPS--PDHEKGIRVMCVELIANRFLRKMVRVLVATSVREAAAGAQEDALL 419

Query: 454  RLMEXXXXXXXXXXXXPDGLCLVDVGYSDFDPRLCFI 344
            +LM+            PDGLCLVDVGY++FDPR C I
Sbjct: 420  KLMDATCRRATAPPAPPDGLCLVDVGYTEFDPRNCLI 456


>ref|XP_006372224.1| hypothetical protein POPTR_0018s14400g [Populus trichocarpa]
            gi|550318755|gb|ERP50021.1| hypothetical protein
            POPTR_0018s14400g [Populus trichocarpa]
          Length = 448

 Score =  421 bits (1083), Expect = e-115
 Identities = 217/337 (64%), Positives = 260/337 (77%), Gaps = 4/337 (1%)
 Frame = -1

Query: 1342 DQSGRWARVTFRIVVSYHGEYFDGWQKQPGLNTVQGLVERSIGKFIDERKAQQRKDKGLP 1163
            D+SGRWARVTF+IV+SYHG  FDGWQKQPGLNTVQGLVE+S+G+F+DE+KAQQ K++  P
Sbjct: 117  DKSGRWARVTFKIVLSYHGGSFDGWQKQPGLNTVQGLVEKSLGRFVDEKKAQQLKEQCKP 176

Query: 1162 VEGMAVVAGRTDKGVTALNQVCSFYTWRKDVRNEEIEHAINFAAPGKLRVVSVSQVSRAF 983
            +EG A VAGRTDKGV+AL QVCSFYTWRKDV+  EIE AIN  APGK+RV S+S+VSRAF
Sbjct: 177  LEGCASVAGRTDKGVSALQQVCSFYTWRKDVKPHEIEDAINDVAPGKVRVESISEVSRAF 236

Query: 982  HPNFCAKWRRYLYIFPFEEVDCRDQNNNAIEETGNMGFDNSH---LLKRNVIVEDNAKDN 812
            HPNF AKWRRYLYIFP  +     +N   IE  G +   +SH     +RN   E  +++N
Sbjct: 237  HPNFSAKWRRYLYIFPLND----GENREEIEGEGGIENFSSHENCEKQRNECGELASEEN 292

Query: 811  IKNH-IDEKDELDGIKKPTNFSIARVDQLLRQLEGKLLSYKMFARDTKAARNTGPSTECF 635
            ++N  I ++DEL G KKP +FS+ RV+QLL+QLEGKLLSYKMFARDTKA+RN GP TECF
Sbjct: 293  VENSIISDEDELQGAKKPRSFSVCRVNQLLQQLEGKLLSYKMFARDTKASRNVGPPTECF 352

Query: 634  VYHARAAEAMIPSSNKDHVDASKVMCVELVANRFLRRMVRVLVATVVREAAAGADDDVLL 455
            +YHARA E  +PS   DH    +VMCVEL+ANRFLR+MVRVLVAT VREAAAGA +D LL
Sbjct: 353  LYHARATETRLPS--PDHEKGIRVMCVELIANRFLRKMVRVLVATSVREAAAGAQEDALL 410

Query: 454  RLMEXXXXXXXXXXXXPDGLCLVDVGYSDFDPRLCFI 344
            +LM+            PDGLCLVDVGY++FDPR C I
Sbjct: 411  KLMDATCRRATAPPAPPDGLCLVDVGYTEFDPRNCLI 447


>ref|XP_002331405.1| predicted protein [Populus trichocarpa]
          Length = 428

 Score =  421 bits (1083), Expect = e-115
 Identities = 217/337 (64%), Positives = 260/337 (77%), Gaps = 4/337 (1%)
 Frame = -1

Query: 1342 DQSGRWARVTFRIVVSYHGEYFDGWQKQPGLNTVQGLVERSIGKFIDERKAQQRKDKGLP 1163
            D+SGRWARVTF+IV+SYHG  FDGWQKQPGLNTVQGLVE+S+G+F+DE+KAQQ K++  P
Sbjct: 97   DKSGRWARVTFKIVLSYHGGSFDGWQKQPGLNTVQGLVEKSLGRFVDEKKAQQLKEQCKP 156

Query: 1162 VEGMAVVAGRTDKGVTALNQVCSFYTWRKDVRNEEIEHAINFAAPGKLRVVSVSQVSRAF 983
            +EG A VAGRTDKGV+AL QVCSFYTWRKDV+  EIE AIN  APGK+RV S+S+VSRAF
Sbjct: 157  LEGCASVAGRTDKGVSALQQVCSFYTWRKDVKPHEIEDAINDVAPGKVRVESISEVSRAF 216

Query: 982  HPNFCAKWRRYLYIFPFEEVDCRDQNNNAIEETGNMGFDNSH---LLKRNVIVEDNAKDN 812
            HPNF AKWRRYLYIFP  +     +N   IE  G +   +SH     +RN   E  +++N
Sbjct: 217  HPNFSAKWRRYLYIFPLND----GENREEIEGEGGIENFSSHENCEKQRNECGELASEEN 272

Query: 811  IKNH-IDEKDELDGIKKPTNFSIARVDQLLRQLEGKLLSYKMFARDTKAARNTGPSTECF 635
            ++N  I ++DEL G KKP +FS+ RV+QLL+QLEGKLLSYKMFARDTKA+RN GP TECF
Sbjct: 273  VENSIISDEDELQGAKKPRSFSVCRVNQLLQQLEGKLLSYKMFARDTKASRNVGPPTECF 332

Query: 634  VYHARAAEAMIPSSNKDHVDASKVMCVELVANRFLRRMVRVLVATVVREAAAGADDDVLL 455
            +YHARA E  +PS   DH    +VMCVEL+ANRFLR+MVRVLVAT VREAAAGA +D LL
Sbjct: 333  LYHARATETRLPS--PDHEKGIRVMCVELIANRFLRKMVRVLVATSVREAAAGAQEDALL 390

Query: 454  RLMEXXXXXXXXXXXXPDGLCLVDVGYSDFDPRLCFI 344
            +LM+            PDGLCLVDVGY++FDPR C I
Sbjct: 391  KLMDATCRRATAPPAPPDGLCLVDVGYTEFDPRNCLI 427


>ref|XP_002275354.2| PREDICTED: tRNA pseudouridine synthase A-like [Vitis vinifera]
          Length = 433

 Score =  419 bits (1078), Expect = e-114
 Identities = 215/348 (61%), Positives = 264/348 (75%), Gaps = 2/348 (0%)
 Frame = -1

Query: 1378 SDEYAPENNLPDDQSGRWARVTFRIVVSYHGEYFDGWQKQPGLNTVQGLVERSIGKFIDE 1199
            SD+    N L  D+ GRWAR+TF+IV+SYHG  FDGWQKQPGLNTVQGLVE S+G+F+DE
Sbjct: 88   SDKTEFGNVLTKDRGGRWARLTFKIVLSYHGASFDGWQKQPGLNTVQGLVEASLGRFVDE 147

Query: 1198 RKAQQRKDKGLPVEGMAVVAGRTDKGVTALNQVCSFYTWRKDVRNEEIEHAINFAAPGKL 1019
            RKAQQ K+K LPVEGM  VAGRTDKGVTAL QVCSFYTW+KDV+ ++IE AIN AAPGKL
Sbjct: 148  RKAQQLKEKNLPVEGMVTVAGRTDKGVTALQQVCSFYTWKKDVKVQDIEDAINGAAPGKL 207

Query: 1018 RVVSVSQVSRAFHPNFCAKWRRYLYIFPFEEVDCRDQNNNAIEETGNMGFDNSHLLKRNV 839
            RV+SVS+VSR FHPNF AKWR Y YIFP  + D  +Q +    +   + F+  +  + + 
Sbjct: 208  RVISVSEVSRIFHPNFSAKWRHYFYIFPLNDGDDGEQISENEMDIQKISFNEKYGEQGSE 267

Query: 838  I-VEDNAKDNIKNHI-DEKDELDGIKKPTNFSIARVDQLLRQLEGKLLSYKMFARDTKAA 665
               + N  +N +N I D+  E +  KKP+ FSI+RVDQLLRQLEGKLLSYK+FARDTKA+
Sbjct: 268  CPAQYNGGENTENLIFDDDGEFESRKKPSTFSISRVDQLLRQLEGKLLSYKIFARDTKAS 327

Query: 664  RNTGPSTECFVYHARAAEAMIPSSNKDHVDASKVMCVELVANRFLRRMVRVLVATVVREA 485
            RN GP TECFV+HARA EA +  S  D  + +KVMC+ELVANRFLR+MVRVLVAT +REA
Sbjct: 328  RNIGPPTECFVFHARATEARLQFS--DDGEGTKVMCIELVANRFLRKMVRVLVATSIREA 385

Query: 484  AAGADDDVLLRLMEXXXXXXXXXXXXPDGLCLVDVGYSDFDPRLCFIR 341
            AAGA+ D LL+LM+            PDGLCL+DVG+++FDP++CFIR
Sbjct: 386  AAGAEQDALLKLMDATCRRATAPPAPPDGLCLIDVGFTEFDPQICFIR 433


>ref|XP_002524161.1| pseudouridylate synthase, putative [Ricinus communis]
            gi|223536579|gb|EEF38224.1| pseudouridylate synthase,
            putative [Ricinus communis]
          Length = 443

 Score =  417 bits (1072), Expect = e-114
 Identities = 211/335 (62%), Positives = 261/335 (77%), Gaps = 1/335 (0%)
 Frame = -1

Query: 1345 DDQSGRWARVTFRIVVSYHGEYFDGWQKQPGLNTVQGLVERSIGKFIDERKAQQRKDKGL 1166
            +D+ GRWARV F+I +SYHG  FDGWQKQPGLNTVQGLVE+S+GKF+DE+KAQQ K+   
Sbjct: 111  EDRFGRWARVNFKIDLSYHGGSFDGWQKQPGLNTVQGLVEKSLGKFVDEKKAQQLKEACK 170

Query: 1165 PVEGMAVVAGRTDKGVTALNQVCSFYTWRKDVRNEEIEHAINFAAPGKLRVVSVSQVSRA 986
            P+EG AVVAGRTDKGV+AL QVCSFYTWRKDVR  EIE AIN +APGK+RV+SVS+VSR 
Sbjct: 171  PLEGCAVVAGRTDKGVSALRQVCSFYTWRKDVRPHEIEDAINSSAPGKIRVISVSEVSRV 230

Query: 985  FHPNFCAKWRRYLYIFPFEEVDCRDQNNNAIEETGNMGFDNSHLLKRNVIVEDNAKDNIK 806
            FHPNF AKWRRYLYIFP  + +  +Q+ ++ E+  N+     +  +RN   E  ++++++
Sbjct: 231  FHPNFSAKWRRYLYIFPINDGEDSEQSFDS-EDLENLRSYEKYDEQRNGCAELTSEEHVE 289

Query: 805  NHI-DEKDELDGIKKPTNFSIARVDQLLRQLEGKLLSYKMFARDTKAARNTGPSTECFVY 629
              I  +KDEL+G KKP  FSI RV+QLL+QLEGKLLSYK+FARDTKA+RN GP TECF+Y
Sbjct: 290  ELITSDKDELEGAKKPRIFSICRVNQLLQQLEGKLLSYKIFARDTKASRNVGPPTECFIY 349

Query: 628  HARAAEAMIPSSNKDHVDASKVMCVELVANRFLRRMVRVLVATVVREAAAGADDDVLLRL 449
            HARA EA +P    DH +  KVMCVELVANRFLR+MVRVLVAT +REAAAGA+DD LL+L
Sbjct: 350  HARATEARLPC--PDHGEGRKVMCVELVANRFLRKMVRVLVATSIREAAAGAEDDALLKL 407

Query: 448  MEXXXXXXXXXXXXPDGLCLVDVGYSDFDPRLCFI 344
            M+            PDGLCL DVGY++FD ++C +
Sbjct: 408  MDASCRRASAPPAPPDGLCLFDVGYTEFDAQICIV 442


>gb|EMJ23926.1| hypothetical protein PRUPE_ppa006478mg [Prunus persica]
          Length = 409

 Score =  412 bits (1059), Expect = e-112
 Identities = 209/335 (62%), Positives = 261/335 (77%), Gaps = 2/335 (0%)
 Frame = -1

Query: 1342 DQSGRWARVTFRIVVSYHGEYFDGWQKQPGLNTVQGLVERSIGKFIDERKAQQRKDKGLP 1163
            D+ GRWAR+TF+IVVSYHG  FDGWQ+QPGLNTVQ +VE+S+GKF+DERKAQ  KDKGLP
Sbjct: 77   DKGGRWARLTFKIVVSYHGGSFDGWQRQPGLNTVQSVVEKSLGKFVDERKAQMLKDKGLP 136

Query: 1162 VEGMAVVAGRTDKGVTALNQVCSFYTWRKDVRNEEIEHAINFAAPGKLRVVSVSQVSRAF 983
            +EG A+VAGRTDKGVTA++QVCSFYTWRKDV++++I  AIN AAPGKLRVVSV++VSRAF
Sbjct: 137  LEGAALVAGRTDKGVTAVHQVCSFYTWRKDVKSQDITDAINSAAPGKLRVVSVTEVSRAF 196

Query: 982  HPNFCAKWRRYLYIFPFEEVDCRDQNNNAIEETGNM-GFDNSHLLKRNVIVEDNAKDNIK 806
            HPNF AKWR YLYIFPF + +  +Q+N + E   N    +N H  K     +   + N+ 
Sbjct: 197  HPNFTAKWRHYLYIFPFNDEEDMEQSNQSGENAQNFKSLENYHEHKNG--CDQCNEANVG 254

Query: 805  N-HIDEKDELDGIKKPTNFSIARVDQLLRQLEGKLLSYKMFARDTKAARNTGPSTECFVY 629
            N  I++ ++L+ + KP  F+++RV+QLL++LEGKLLSYKMFARDTK +RN GP TECF+Y
Sbjct: 255  NLVINDNEDLETL-KPREFTVSRVNQLLQKLEGKLLSYKMFARDTKPSRNEGPPTECFLY 313

Query: 628  HARAAEAMIPSSNKDHVDASKVMCVELVANRFLRRMVRVLVATVVREAAAGADDDVLLRL 449
            HARA E+ +P S  +H    +VMC+ELVANRFLRRMVRVLVAT +REAAAGAD+D LL+L
Sbjct: 314  HARAKESKLPCS--EHEKGRRVMCIELVANRFLRRMVRVLVATSIREAAAGADEDALLKL 371

Query: 448  MEXXXXXXXXXXXXPDGLCLVDVGYSDFDPRLCFI 344
            M+            PDGLCLVDVGY +FDP+ C I
Sbjct: 372  MDATCRRATAPPAPPDGLCLVDVGYEEFDPQDCLI 406


>ref|XP_003532450.2| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like isoform
            X1 [Glycine max]
          Length = 444

 Score =  411 bits (1056), Expect = e-112
 Identities = 210/339 (61%), Positives = 253/339 (74%)
 Frame = -1

Query: 1360 ENNLPDDQSGRWARVTFRIVVSYHGEYFDGWQKQPGLNTVQGLVERSIGKFIDERKAQQR 1181
            E+   +D+SGRWAR TF+I++SYHG  FDGWQKQPGLNTVQ +VE S+GKF+DE+K Q  
Sbjct: 123  ESVASEDRSGRWARTTFKIILSYHGGSFDGWQKQPGLNTVQSIVEGSLGKFVDEKKTQLL 182

Query: 1180 KDKGLPVEGMAVVAGRTDKGVTALNQVCSFYTWRKDVRNEEIEHAINFAAPGKLRVVSVS 1001
            KDKGLP+EG A+VAGRTDKGVT L QVCSFYTW+KDV+  +IE AIN AAPGKLRV+SVS
Sbjct: 183  KDKGLPIEGCAIVAGRTDKGVTGLQQVCSFYTWKKDVKPRDIEDAINHAAPGKLRVISVS 242

Query: 1000 QVSRAFHPNFCAKWRRYLYIFPFEEVDCRDQNNNAIEETGNMGFDNSHLLKRNVIVEDNA 821
            +VSR FHPNF AKWRRYLYIFP       DQ++           DN           D+ 
Sbjct: 243  EVSRVFHPNFSAKWRRYLYIFPLTNGGYTDQSS-----------DNGEFY-------DSF 284

Query: 820  KDNIKNHIDEKDELDGIKKPTNFSIARVDQLLRQLEGKLLSYKMFARDTKAARNTGPSTE 641
            K N  +    KDEL+  KK   FSI++V++LLR+LEGKLLSYKMFARDTKA+RN GP TE
Sbjct: 285  KYNEIHDSASKDELENEKKSYAFSISKVNRLLRKLEGKLLSYKMFARDTKASRNDGPPTE 344

Query: 640  CFVYHARAAEAMIPSSNKDHVDASKVMCVELVANRFLRRMVRVLVATVVREAAAGADDDV 461
            CFVYHARA E  +P++  DH + +KVMCVELVANRFLR+MVRVLVAT +REAAAGA+DD 
Sbjct: 345  CFVYHARAMEVKLPAT--DHGEETKVMCVELVANRFLRKMVRVLVATSIREAAAGAEDDA 402

Query: 460  LLRLMEXXXXXXXXXXXXPDGLCLVDVGYSDFDPRLCFI 344
            L++LM+            PDGLCLVDVGY++F+P+ CFI
Sbjct: 403  LIKLMDATCRRATAPPAPPDGLCLVDVGYTEFEPQKCFI 441


>gb|EOY32187.1| Pseudouridine synthase isoform 2 [Theobroma cacao]
          Length = 446

 Score =  410 bits (1055), Expect = e-112
 Identities = 207/334 (61%), Positives = 254/334 (76%), Gaps = 1/334 (0%)
 Frame = -1

Query: 1342 DQSGRWARVTFRIVVSYHGEYFDGWQKQPGLNTVQGLVERSIGKFIDERKAQQRKDKGLP 1163
            ++SGRW RVTF+I++SY+G  FDGWQKQPGLNTVQ +VERS+G+F+DE+KAQ  K+K  P
Sbjct: 112  ERSGRWERVTFKIIISYNGGAFDGWQKQPGLNTVQEIVERSLGRFVDEKKAQLLKEKSKP 171

Query: 1162 VEGMAVVAGRTDKGVTALNQVCSFYTWRKDVRNEEIEHAINFAAPGKLRVVSVSQVSRAF 983
            +EG AVVAGRTDKGV+A+ QVCSFYTWRKDV+  +IE AIN  APGKLRVVSVS+VSR F
Sbjct: 172  LEGCAVVAGRTDKGVSAIRQVCSFYTWRKDVKPWDIEDAINSVAPGKLRVVSVSEVSRVF 231

Query: 982  HPNFCAKWRRYLYIFPFEEVDCRDQNNNAIEETGNMGFDNSHLLKRNVIVEDNAKDNIKN 803
            HPNF AKWR YLYIFP    +   Q+    +E  N   D ++  +RN  +E+   +N++N
Sbjct: 232  HPNFSAKWRHYLYIFPLSNQEIEKQSCENKKEVENFISDGNYNEQRNGYLENIRWENVEN 291

Query: 802  -HIDEKDELDGIKKPTNFSIARVDQLLRQLEGKLLSYKMFARDTKAARNTGPSTECFVYH 626
              I +   L+   KPT FS+ RV+QLL+QLE KLLSYKMFARDTKA+RN GP TECF+YH
Sbjct: 292  LIISDNMGLEAANKPTRFSVCRVNQLLQQLERKLLSYKMFARDTKASRNIGPPTECFMYH 351

Query: 625  ARAAEAMIPSSNKDHVDASKVMCVELVANRFLRRMVRVLVATVVREAAAGADDDVLLRLM 446
            ARAAEA IP S  DH +  +VMCVELVANRFLR+MVRVLVAT +REAAAGA++D LL+LM
Sbjct: 352  ARAAEARIPCSVNDHGEGREVMCVELVANRFLRKMVRVLVATSIREAAAGAEEDALLKLM 411

Query: 445  EXXXXXXXXXXXXPDGLCLVDVGYSDFDPRLCFI 344
                         PDGLCLVDVGY++FDP+ C +
Sbjct: 412  GATCRRATAPPAPPDGLCLVDVGYTEFDPQNCLL 445


>gb|EXC12817.1| tRNA pseudouridine synthase A [Morus notabilis]
          Length = 446

 Score =  408 bits (1048), Expect = e-111
 Identities = 210/334 (62%), Positives = 253/334 (75%)
 Frame = -1

Query: 1345 DDQSGRWARVTFRIVVSYHGEYFDGWQKQPGLNTVQGLVERSIGKFIDERKAQQRKDKGL 1166
            +++SGRWAR TF++V+ YHG  FDGWQKQPGLNTVQGLVERS+G+F+DE+KAQ  KDK L
Sbjct: 118  EERSGRWARATFKVVLGYHGASFDGWQKQPGLNTVQGLVERSLGRFVDEKKAQLLKDKCL 177

Query: 1165 PVEGMAVVAGRTDKGVTALNQVCSFYTWRKDVRNEEIEHAINFAAPGKLRVVSVSQVSRA 986
            P+E   VVAGRTDKGVTAL QVCSFYTWRKD+  ++IE AIN AA GKL+  SVS+VSR 
Sbjct: 178  PLEACTVVAGRTDKGVTALQQVCSFYTWRKDITCQDIEEAINNAALGKLKAKSVSEVSRV 237

Query: 985  FHPNFCAKWRRYLYIFPFEEVDCRDQNNNAIEETGNMGFDNSHLLKRNVIVEDNAKDNIK 806
            FHPNF AKWRRYLYIFPF + +  +Q+N   E         S   + N    D +  N+ 
Sbjct: 238  FHPNFSAKWRRYLYIFPFNDEEDEEQSNKNGENLETYEKIESGCGEWN----DESFGNL- 292

Query: 805  NHIDEKDELDGIKKPTNFSIARVDQLLRQLEGKLLSYKMFARDTKAARNTGPSTECFVYH 626
              ID+ +EL+  KKP++FS++RVDQLLR LEGKLLSYKMFARDTKA+RN GP TECF+YH
Sbjct: 293  -IIDDSEELESGKKPSSFSVSRVDQLLRLLEGKLLSYKMFARDTKASRNEGPPTECFIYH 351

Query: 625  ARAAEAMIPSSNKDHVDASKVMCVELVANRFLRRMVRVLVATVVREAAAGADDDVLLRLM 446
            ARAAEA +P+S  D  +  K+MCVELVANRFLR+MVRVLVAT +REAAAGA++D LL+LM
Sbjct: 352  ARAAEARLPTS--DCTEGRKIMCVELVANRFLRKMVRVLVATSIREAAAGAEEDALLKLM 409

Query: 445  EXXXXXXXXXXXXPDGLCLVDVGYSDFDPRLCFI 344
            +            PDGLCLVDVGYS+F P  C I
Sbjct: 410  DATCRRATAPPAPPDGLCLVDVGYSEFKPNNCLI 443


>emb|CBI33811.3| unnamed protein product [Vitis vinifera]
          Length = 402

 Score =  407 bits (1047), Expect = e-111
 Identities = 212/346 (61%), Positives = 252/346 (72%)
 Frame = -1

Query: 1378 SDEYAPENNLPDDQSGRWARVTFRIVVSYHGEYFDGWQKQPGLNTVQGLVERSIGKFIDE 1199
            SD+    N L  D+ GRWAR+TF+IV+SYHG  FDGWQKQPGLNTVQGLVE S+G+F+DE
Sbjct: 88   SDKTEFGNVLTKDRGGRWARLTFKIVLSYHGASFDGWQKQPGLNTVQGLVEASLGRFVDE 147

Query: 1198 RKAQQRKDKGLPVEGMAVVAGRTDKGVTALNQVCSFYTWRKDVRNEEIEHAINFAAPGKL 1019
            RKAQQ K+K LPVEGM  VAGRTDKGVTAL QVCSFYTW+KDV+ ++IE AIN AAPGKL
Sbjct: 148  RKAQQLKEKNLPVEGMVTVAGRTDKGVTALQQVCSFYTWKKDVKVQDIEDAINGAAPGKL 207

Query: 1018 RVVSVSQVSRAFHPNFCAKWRRYLYIFPFEEVDCRDQNNNAIEETGNMGFDNSHLLKRNV 839
            RV+SVS+VSR FHPNF AKWR Y YIFP  + D  +Q                       
Sbjct: 208  RVISVSEVSRIFHPNFSAKWRHYFYIFPLNDGDDGEQ----------------------- 244

Query: 838  IVEDNAKDNIKNHIDEKDELDGIKKPTNFSIARVDQLLRQLEGKLLSYKMFARDTKAARN 659
             + +N  D  K   +E       KKP+ FSI+RVDQLLRQLEGKLLSYK+FARDTKA+RN
Sbjct: 245  -ISENEMDIQKISFNENR-----KKPSTFSISRVDQLLRQLEGKLLSYKIFARDTKASRN 298

Query: 658  TGPSTECFVYHARAAEAMIPSSNKDHVDASKVMCVELVANRFLRRMVRVLVATVVREAAA 479
             GP TECFV+HARA EA +  S  D  + +KVMC+ELVANRFLR+MVRVLVAT +REAAA
Sbjct: 299  IGPPTECFVFHARATEARLQFS--DDGEGTKVMCIELVANRFLRKMVRVLVATSIREAAA 356

Query: 478  GADDDVLLRLMEXXXXXXXXXXXXPDGLCLVDVGYSDFDPRLCFIR 341
            GA+ D LL+LM+            PDGLCL+DVG+++FDP++CFIR
Sbjct: 357  GAEQDALLKLMDATCRRATAPPAPPDGLCLIDVGFTEFDPQICFIR 402


>gb|EOY32186.1| Pseudouridine synthase isoform 1 [Theobroma cacao]
          Length = 444

 Score =  407 bits (1045), Expect = e-111
 Identities = 207/334 (61%), Positives = 254/334 (76%), Gaps = 1/334 (0%)
 Frame = -1

Query: 1342 DQSGRWARVTFRIVVSYHGEYFDGWQKQPGLNTVQGLVERSIGKFIDERKAQQRKDKGLP 1163
            ++SGRW RVTF+I++SY+G  FDGWQKQPGLNTVQ +VERS+G+F+DE+KAQ  K+K  P
Sbjct: 112  ERSGRWERVTFKIIISYNGGAFDGWQKQPGLNTVQEIVERSLGRFVDEKKAQLLKEKSKP 171

Query: 1162 VEGMAVVAGRTDKGVTALNQVCSFYTWRKDVRNEEIEHAINFAAPGKLRVVSVSQVSRAF 983
            +EG AVVAGRTDKGV+A+ QVCSFYTWRKDV+  +IE AIN  APGKLRVVSVS+VSR F
Sbjct: 172  LEGCAVVAGRTDKGVSAIRQVCSFYTWRKDVKPWDIEDAINSVAPGKLRVVSVSEVSRVF 231

Query: 982  HPNFCAKWRRYLYIFPFEEVDCRDQNNNAIEETGNMGFDNSHLLKRNVIVEDNAKDNIKN 803
            HPNF AKWR YLYIFP    +   Q+    +E  N   D ++  +RN  +E+   +N++N
Sbjct: 232  HPNFSAKWRHYLYIFPLSNQEIEKQSCENKKEVENFISDGNYNEQRNGYLENIRWENVEN 291

Query: 802  -HIDEKDELDGIKKPTNFSIARVDQLLRQLEGKLLSYKMFARDTKAARNTGPSTECFVYH 626
              I +   L+   KPT FS+ RV+QLL+QLE KLLSYKMFARDTKA+RN GP TECF+YH
Sbjct: 292  LIISDNMGLEAANKPTRFSVCRVNQLLQQLERKLLSYKMFARDTKASRNIGPPTECFMYH 351

Query: 625  ARAAEAMIPSSNKDHVDASKVMCVELVANRFLRRMVRVLVATVVREAAAGADDDVLLRLM 446
            ARAAEA IP S  DH +  +VMCVELVANRFLR+MVRVLVAT +REAAAGA++D LL+LM
Sbjct: 352  ARAAEARIPCS--DHGEGREVMCVELVANRFLRKMVRVLVATSIREAAAGAEEDALLKLM 409

Query: 445  EXXXXXXXXXXXXPDGLCLVDVGYSDFDPRLCFI 344
                         PDGLCLVDVGY++FDP+ C +
Sbjct: 410  GATCRRATAPPAPPDGLCLVDVGYTEFDPQNCLL 443


>gb|ESW32209.1| hypothetical protein PHAVU_002G302500g [Phaseolus vulgaris]
          Length = 440

 Score =  403 bits (1036), Expect = e-110
 Identities = 209/345 (60%), Positives = 255/345 (73%)
 Frame = -1

Query: 1378 SDEYAPENNLPDDQSGRWARVTFRIVVSYHGEYFDGWQKQPGLNTVQGLVERSIGKFIDE 1199
            SD+   E+   +D+SGRWAR TF+I++SYHG  FDGWQKQPGLNTVQG+VE S+GKF+DE
Sbjct: 114  SDQSELESVASEDRSGRWARRTFKIILSYHGGSFDGWQKQPGLNTVQGIVEASLGKFVDE 173

Query: 1198 RKAQQRKDKGLPVEGMAVVAGRTDKGVTALNQVCSFYTWRKDVRNEEIEHAINFAAPGKL 1019
            +K Q  KDKGLP+EG AVVAGRTDKGVT L QVCSFYTW+KDV+  +IE AIN AA GKL
Sbjct: 174  KKTQLLKDKGLPIEGCAVVAGRTDKGVTGLQQVCSFYTWKKDVKPRDIEDAINQAALGKL 233

Query: 1018 RVVSVSQVSRAFHPNFCAKWRRYLYIFPFEEVDCRDQNNNAIEETGNMGFDNSHLLKRNV 839
            RV+SVS+VSR FHPNF AKWR YLYIFP           N   +  N   ++  + K N 
Sbjct: 234  RVISVSEVSRVFHPNFSAKWRHYLYIFPL---------TNGYRDQSNSNGESCDISKYNE 284

Query: 838  IVEDNAKDNIKNHIDEKDELDGIKKPTNFSIARVDQLLRQLEGKLLSYKMFARDTKAARN 659
            + + ++KD I+N   EK  L        FS+++V+ LLR+LEGKLLSYKMFARDTKA+RN
Sbjct: 285  MHDSSSKDGIEN--QEKSYL--------FSVSKVNVLLRKLEGKLLSYKMFARDTKASRN 334

Query: 658  TGPSTECFVYHARAAEAMIPSSNKDHVDASKVMCVELVANRFLRRMVRVLVATVVREAAA 479
             GP TECFVYHARA E  +P++  D  + +KVMCVELVANRFLR+MVRVLVAT +REAAA
Sbjct: 335  DGPPTECFVYHARAMEVKLPTT--DCGEETKVMCVELVANRFLRKMVRVLVATSIREAAA 392

Query: 478  GADDDVLLRLMEXXXXXXXXXXXXPDGLCLVDVGYSDFDPRLCFI 344
            GA+DD L++LM+            PDGLCLVDVGY++FDP+ CFI
Sbjct: 393  GAEDDALIKLMDATCRRATAPPAPPDGLCLVDVGYTEFDPQKCFI 437


>ref|XP_006474334.1| PREDICTED: uncharacterized protein LOC102622951 [Citrus sinensis]
          Length = 454

 Score =  397 bits (1021), Expect = e-108
 Identities = 205/329 (62%), Positives = 249/329 (75%), Gaps = 2/329 (0%)
 Frame = -1

Query: 1336 SGRWARVTFRIVVSYHGEYFDGWQKQPGLNTVQGLVERSIGKFIDERKAQQRKDKGLPVE 1157
            SGRWAR  F+IVVSYHG  FDGWQKQP LNTVQGLVE+ +G F+DE++A+  K+K  P+E
Sbjct: 127  SGRWARANFKIVVSYHGPSFDGWQKQPDLNTVQGLVEKCLGSFVDEKRAKLLKEKCKPLE 186

Query: 1156 GMAVVAGRTDKGVTALNQVCSFYTWRKDVRNEEIEHAINFAAPGKLRVVSVSQVSRAFHP 977
            G A+VAGRTDKGVTAL QVCSFYTWRKDV+  EIE AIN AAPGK+RV+SVSQVSR FHP
Sbjct: 187  GCALVAGRTDKGVTALQQVCSFYTWRKDVKPSEIEDAINSAAPGKIRVISVSQVSRVFHP 246

Query: 976  NFCAKWRRYLYIFPFEEVDCRDQNNNAIEETGNMGFDNSHLLKRNVIVEDN-AKDNIKN- 803
            NF AKWRRYLYIFP  + + R+Q+ ++  E  N    N      NV  + N   +NI+N 
Sbjct: 247  NFSAKWRRYLYIFPLNDGEKREQSIDSEVEVENFHTSN------NVGKQSNGCYENIENL 300

Query: 802  HIDEKDELDGIKKPTNFSIARVDQLLRQLEGKLLSYKMFARDTKAARNTGPSTECFVYHA 623
             I+++      +KP NF+I RV+ LL++LEGKLLSYK FARDTKA+RN GP TECF+YHA
Sbjct: 301  LINDEGGFGSHEKPRNFTICRVNLLLQRLEGKLLSYKTFARDTKASRNIGPPTECFIYHA 360

Query: 622  RAAEAMIPSSNKDHVDASKVMCVELVANRFLRRMVRVLVATVVREAAAGADDDVLLRLME 443
            RA EA +P    DH +  KVMCVELVANRFLR+MVRVLVAT+VREAAAGAD+D LL+L++
Sbjct: 361  RATEATLPCPVNDHGEGRKVMCVELVANRFLRKMVRVLVATLVREAAAGADEDALLKLVD 420

Query: 442  XXXXXXXXXXXXPDGLCLVDVGYSDFDPR 356
                        P+GLCLVDVGY++FDP+
Sbjct: 421  ATCRRATAPPAPPEGLCLVDVGYTNFDPQ 449


>ref|XP_006453182.1| hypothetical protein CICLE_v10008288mg [Citrus clementina]
            gi|557556408|gb|ESR66422.1| hypothetical protein
            CICLE_v10008288mg [Citrus clementina]
          Length = 447

 Score =  397 bits (1021), Expect = e-108
 Identities = 205/329 (62%), Positives = 249/329 (75%), Gaps = 2/329 (0%)
 Frame = -1

Query: 1336 SGRWARVTFRIVVSYHGEYFDGWQKQPGLNTVQGLVERSIGKFIDERKAQQRKDKGLPVE 1157
            SGRWAR  F+IVVSYHG  FDGWQKQP LNTVQGLVE+ +G F+DE++A+  K+K  P+E
Sbjct: 120  SGRWARANFKIVVSYHGPSFDGWQKQPDLNTVQGLVEKCLGSFVDEKRAKLLKEKCKPLE 179

Query: 1156 GMAVVAGRTDKGVTALNQVCSFYTWRKDVRNEEIEHAINFAAPGKLRVVSVSQVSRAFHP 977
            G A+VAGRTDKGVTAL QVCSFYTWRKDV+  EIE AIN AAPGK+RV+SVSQVSR FHP
Sbjct: 180  GCALVAGRTDKGVTALQQVCSFYTWRKDVKPSEIEDAINSAAPGKIRVISVSQVSRVFHP 239

Query: 976  NFCAKWRRYLYIFPFEEVDCRDQNNNAIEETGNMGFDNSHLLKRNVIVEDN-AKDNIKN- 803
            NF AKWRRYLYIFP  + + R+Q+ ++  E  N    N      NV  + N   +NI+N 
Sbjct: 240  NFSAKWRRYLYIFPLNDGEKREQSIDSEVEVENFHTSN------NVGKQSNGCYENIENL 293

Query: 802  HIDEKDELDGIKKPTNFSIARVDQLLRQLEGKLLSYKMFARDTKAARNTGPSTECFVYHA 623
             I+++      +KP NF+I RV+ LL++LEGKLLSYK FARDTKA+RN GP TECF+YHA
Sbjct: 294  LINDEGGFGSHEKPRNFTICRVNLLLQRLEGKLLSYKTFARDTKASRNIGPPTECFIYHA 353

Query: 622  RAAEAMIPSSNKDHVDASKVMCVELVANRFLRRMVRVLVATVVREAAAGADDDVLLRLME 443
            RA EA +P    DH +  KVMCVELVANRFLR+MVRVLVAT+VREAAAGAD+D LL+L++
Sbjct: 354  RATEATLPCPVNDHGEGRKVMCVELVANRFLRKMVRVLVATLVREAAAGADEDALLKLVD 413

Query: 442  XXXXXXXXXXXXPDGLCLVDVGYSDFDPR 356
                        P+GLCLVDVGY++FDP+
Sbjct: 414  ATCRRATAPPAPPEGLCLVDVGYTNFDPQ 442


>ref|XP_006850975.1| hypothetical protein AMTR_s00025p00208060 [Amborella trichopoda]
            gi|548854646|gb|ERN12556.1| hypothetical protein
            AMTR_s00025p00208060 [Amborella trichopoda]
          Length = 371

 Score =  396 bits (1018), Expect = e-107
 Identities = 209/337 (62%), Positives = 249/337 (73%), Gaps = 2/337 (0%)
 Frame = -1

Query: 1345 DDQSGRWARVTFRIVVSYHGEYFDGWQKQPGLNTVQGLVERSIGKFIDERKAQQRKDKGL 1166
            D + GRWAR TF+IVVSYHG  FDGWQKQPGL TVQG VE  +GKF+D++KAQQ +DK L
Sbjct: 42   DSRGGRWARRTFKIVVSYHGSSFDGWQKQPGLRTVQGSVESVLGKFVDDKKAQQLRDKSL 101

Query: 1165 PVEGMAVVAGRTDKGVTALNQVCSFYTWRKDVRNEEIEHAINFAAPGKLRVVSVSQVSRA 986
            PVEG A VAGRTDKGV+AL QVCSFYTWR DV+ +EIEHAIN  APG+LR V VS+VSRA
Sbjct: 102  PVEGCATVAGRTDKGVSALQQVCSFYTWRTDVKTQEIEHAINTVAPGQLRAVYVSEVSRA 161

Query: 985  FHPNFCAKWRRYLYIFPFEEVDCRDQNNNAIEETGNMGF--DNSHLLKRNVIVEDNAKDN 812
            FHPNF AKWR YLYIFP +     ++ +  +E  G  GF   N+H  +R   VE+  ++ 
Sbjct: 162  FHPNFSAKWRHYLYIFPLKV----EEESLGLENIGG-GFIQCNNHDEERKEWVENGLENG 216

Query: 811  IKNHIDEKDELDGIKKPTNFSIARVDQLLRQLEGKLLSYKMFARDTKAARNTGPSTECFV 632
                +DE D L+   KP  FS+++VD++LRQLEG+LLSYKMFARDTK++RN GP TECF+
Sbjct: 217  CSIMVDE-DYLER-SKPMRFSVSKVDRILRQLEGRLLSYKMFARDTKSSRNEGPPTECFL 274

Query: 631  YHARAAEAMIPSSNKDHVDASKVMCVELVANRFLRRMVRVLVATVVREAAAGADDDVLLR 452
            YHARAAE  +P  ++   +   VMCVELVANRFLR+MVRVLVAT +REAAAGA DDVLLR
Sbjct: 275  YHARAAETRLPCPDEVDGNGLGVMCVELVANRFLRKMVRVLVATSIREAAAGAGDDVLLR 334

Query: 451  LMEXXXXXXXXXXXXPDGLCLVDVGYSDFDPRLCFIR 341
            LM+            PDGLCLVDVGY DF P   FIR
Sbjct: 335  LMDATCRRATAPPAPPDGLCLVDVGYEDFKPGNTFIR 371


>ref|XP_004299762.1| PREDICTED: tRNA pseudouridine synthase A-like [Fragaria vesca subsp.
            vesca]
          Length = 410

 Score =  396 bits (1018), Expect = e-107
 Identities = 202/336 (60%), Positives = 255/336 (75%), Gaps = 3/336 (0%)
 Frame = -1

Query: 1342 DQSGRWARVTFRIVVSYHGEYFDGWQKQPGLNTVQGLVERSIGKFIDERKAQQRKDKGLP 1163
            ++ GRWAR+TF+IVVSYHG  FDGWQKQP L TVQ +VE+ +G+F+DE+KAQ  K+KGLP
Sbjct: 76   NRGGRWARLTFKIVVSYHGGSFDGWQKQPELYTVQSVVEQCLGRFVDEKKAQMLKEKGLP 135

Query: 1162 VEGMAVVAGRTDKGVTALNQVCSFYTWRKDVRNEEIEHAINFAAPGKLRVVSVSQVSRAF 983
            +EG A VAGRTDKGVTALNQVCSFYTW KDVR ++I  AI+ AAPGKLR VSV++VSR F
Sbjct: 136  LEGAATVAGRTDKGVTALNQVCSFYTWSKDVRCQDIADAIDNAAPGKLRTVSVTEVSRVF 195

Query: 982  HPNFCAKWRRYLYIFPF-EEVDCRDQNNNAIEETGNMGFDNSHLLKRNVIVEDNAKD-NI 809
            HPNF AKWRRYLYIFPF ++ + R+Q+N+  E    +    +H    + +V DN  + N+
Sbjct: 196  HPNFSAKWRRYLYIFPFNDDEEDREQSNDTGENAQILKIKENH--HEHEVVSDNCSEANV 253

Query: 808  KN-HIDEKDELDGIKKPTNFSIARVDQLLRQLEGKLLSYKMFARDTKAARNTGPSTECFV 632
             N +I +   L+  KKP  FS++RV++LL++LEGKLLSYKMFARDTKA+RN GP TECFV
Sbjct: 254  GNTNITDDVGLEAEKKPQMFSVSRVNKLLQKLEGKLLSYKMFARDTKASRNEGPPTECFV 313

Query: 631  YHARAAEAMIPSSNKDHVDASKVMCVELVANRFLRRMVRVLVATVVREAAAGADDDVLLR 452
            +HARA E  +P S  +H    ++MC+EL+ANRFLRRM+RVLVAT +REAAAGAD+D L++
Sbjct: 314  FHARAREYRLPCS--EHEKGRRIMCIELIANRFLRRMIRVLVATSIREAAAGADEDALIK 371

Query: 451  LMEXXXXXXXXXXXXPDGLCLVDVGYSDFDPRLCFI 344
            LM+            PDGLCLVDVGY +FDP  C I
Sbjct: 372  LMDATCRRATAPPAPPDGLCLVDVGYEEFDPLDCLI 407


>ref|XP_004503558.1| PREDICTED: tRNA pseudouridine synthase A-like [Cicer arietinum]
          Length = 422

 Score =  395 bits (1015), Expect = e-107
 Identities = 202/345 (58%), Positives = 248/345 (71%)
 Frame = -1

Query: 1378 SDEYAPENNLPDDQSGRWARVTFRIVVSYHGEYFDGWQKQPGLNTVQGLVERSIGKFIDE 1199
            SD+   E  +  D+ GRWAR+ F+IV+SYHGE FDGWQKQP LNTVQ +VE S+GKF+DE
Sbjct: 96   SDKTELEKGVSKDRGGRWARINFKIVLSYHGESFDGWQKQPSLNTVQSVVEASLGKFVDE 155

Query: 1198 RKAQQRKDKGLPVEGMAVVAGRTDKGVTALNQVCSFYTWRKDVRNEEIEHAINFAAPGKL 1019
             K Q  K+KGLP+EG A VAGRTDKGVTAL QVCSFYTW+KD+   +IE AIN  APGKL
Sbjct: 156  MKTQLLKEKGLPIEGCASVAGRTDKGVTALQQVCSFYTWKKDINPRDIEDAINDGAPGKL 215

Query: 1018 RVVSVSQVSRAFHPNFCAKWRRYLYIFPFEEVDCRDQNNNAIEETGNMGFDNSHLLKRNV 839
            RV+SV +VSRAFHPNF AKWRRYLYIFP  +   +DQ+ +  E                 
Sbjct: 216  RVISVHEVSRAFHPNFSAKWRRYLYIFPLTDEGDKDQSGSNEESCDR------------- 262

Query: 838  IVEDNAKDNIKNHIDEKDELDGIKKPTNFSIARVDQLLRQLEGKLLSYKMFARDTKAARN 659
             + +   D++      KDEL+   K   FS+ +V++LL++LEGKLLSYKMFARDTKA+RN
Sbjct: 263  FIYNEVCDSV-----SKDELENEMKSYVFSVRKVNRLLQKLEGKLLSYKMFARDTKASRN 317

Query: 658  TGPSTECFVYHARAAEAMIPSSNKDHVDASKVMCVELVANRFLRRMVRVLVATVVREAAA 479
             GP TECFVYHARA EA +P+++      ++VMC+ELVANRFLR+MVRVLVAT +REAAA
Sbjct: 318  DGPPTECFVYHARAMEARLPTTDNGE---ARVMCIELVANRFLRKMVRVLVATTIREAAA 374

Query: 478  GADDDVLLRLMEXXXXXXXXXXXXPDGLCLVDVGYSDFDPRLCFI 344
            GA+DD LLRLM+            PDGLCLVDVGY++FD + CFI
Sbjct: 375  GAEDDALLRLMDATCRRATAPPAPPDGLCLVDVGYAEFDQKKCFI 419


>ref|XP_006283804.1| hypothetical protein CARUB_v10004903mg [Capsella rubella]
            gi|482552509|gb|EOA16702.1| hypothetical protein
            CARUB_v10004903mg [Capsella rubella]
          Length = 421

 Score =  395 bits (1014), Expect = e-107
 Identities = 202/343 (58%), Positives = 259/343 (75%), Gaps = 9/343 (2%)
 Frame = -1

Query: 1345 DDQSGRWARVTFRIVVSYHGEYFDGWQKQPGLNTVQGLVERSIGKFIDERKAQQRKDKGL 1166
            D +SGRW RV F+IV+SY+G  FDGWQKQP L+TVQG+VE+S+G+F+DE+KAQ  K K  
Sbjct: 85   DGRSGRWERVNFKIVLSYNGTSFDGWQKQPDLHTVQGVVEKSLGEFVDEKKAQLLKKKCK 144

Query: 1165 PVEGMAVVAGRTDKGVTALNQVCSFYTWRKDVRNEEIEHAINFAAPGKLRVVSVSQVSRA 986
            P+EG  +VAGRTDKGV+ALNQVCSFYTWRKD+    IE AIN  A GKL+VVS+S+VSR+
Sbjct: 145  PLEGRVLVAGRTDKGVSALNQVCSFYTWRKDIEPIAIEDAINKDASGKLKVVSISKVSRS 204

Query: 985  FHPNFCAKWRRYLYIFPFEEVD--CRDQNNNAIEETGNMGFDNSHLLKRN-VIVEDNAKD 815
            FHPNF AKWRRYLYIFP ++++  C    N+      N  FD +H  +RN ++ E+N ++
Sbjct: 205  FHPNFSAKWRRYLYIFPLDDIEPLCEGGKNHE-----NYIFDENHEKQRNGLLSEENTEE 259

Query: 814  NIKNHIDEKD------ELDGIKKPTNFSIARVDQLLRQLEGKLLSYKMFARDTKAARNTG 653
             + +  DE +      EL  ++KP++FS+++VDQ+L+QL+GK+LSYKMFARDTKAARN G
Sbjct: 260  VVLSEDDELEIEETSKELQVVEKPSDFSVSKVDQILQQLQGKVLSYKMFARDTKAARNEG 319

Query: 652  PSTECFVYHARAAEAMIPSSNKDHVDASKVMCVELVANRFLRRMVRVLVATVVREAAAGA 473
            P TECF+YHARAAE  I  S  DHV+  +VMCVELVANRFLR+MVRVLVAT +REAAAGA
Sbjct: 320  PPTECFMYHARAAE--IKLSCSDHVEGRRVMCVELVANRFLRKMVRVLVATSIREAAAGA 377

Query: 472  DDDVLLRLMEXXXXXXXXXXXXPDGLCLVDVGYSDFDPRLCFI 344
            D+D LL+L+E             +GLCL DVGY+DFDP++  I
Sbjct: 378  DNDALLKLLEASCRRATAPPAPSEGLCLFDVGYTDFDPQISLI 420


>ref|XP_004166389.1| PREDICTED: tRNA pseudouridine synthase A-like [Cucumis sativus]
          Length = 444

 Score =  394 bits (1013), Expect = e-107
 Identities = 206/336 (61%), Positives = 244/336 (72%), Gaps = 3/336 (0%)
 Frame = -1

Query: 1342 DQSGRWARVTFRIVVSYHGEYFDGWQKQPGLNTVQGLVERSIGKFIDERKAQQRKDKGLP 1163
            D++GRWAR TF+IV+SY G  FDGWQKQPGLNTVQGLVERS+GKF+DE+KAQ  KDK LP
Sbjct: 110  DKTGRWARATFKIVLSYDGNSFDGWQKQPGLNTVQGLVERSLGKFVDEKKAQMLKDKCLP 169

Query: 1162 VEGMAVVAGRTDKGVTALNQVCSFYTWRKDVRNEEIEHAINFAAPGKLRVVSVSQVSRAF 983
            +EG A+VAGRTDKGVTAL QVCSFYTWR DV+ ++IE +IN AAPGKLR  SVSQVSR F
Sbjct: 170  LEGCALVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTSSVSQVSRIF 229

Query: 982  HPNFCAKWRRYLYIFPFEEVDCRDQNNNAIEETGNMGFDNSHLLKRNVIVEDNAKDNIKN 803
            HPNF AKWRRYLYI P  + +  + ++   E   N   +  + +K      +   D I +
Sbjct: 230  HPNFSAKWRRYLYILPLNDGENMEPDSTTWENVENR--EEENFVKIEASNGEKCVDGIHD 287

Query: 802  HI---DEKDELDGIKKPTNFSIARVDQLLRQLEGKLLSYKMFARDTKAARNTGPSTECFV 632
            ++      +EL    KP  FSI RV+QLLR+LEGKLLSYKMFARDTKA+RN GP TECFV
Sbjct: 288  NLVLSPNDEELVSADKPQTFSITRVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFV 347

Query: 631  YHARAAEAMIPSSNKDHVDASKVMCVELVANRFLRRMVRVLVATVVREAAAGADDDVLLR 452
            YHARAAE  +P   +       VMCVELVANRFLR+MVRVLVAT +REAAAGA +D LL 
Sbjct: 348  YHARAAETRLPCLEQG--VGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLE 405

Query: 451  LMEXXXXXXXXXXXXPDGLCLVDVGYSDFDPRLCFI 344
            LM+            PDGL LVDVGY+DFD ++CFI
Sbjct: 406  LMDATCRRATAPPAPPDGLSLVDVGYTDFDSQICFI 441


>ref|XP_004137363.1| PREDICTED: tRNA pseudouridine synthase A-like [Cucumis sativus]
          Length = 444

 Score =  394 bits (1011), Expect = e-107
 Identities = 206/336 (61%), Positives = 243/336 (72%), Gaps = 3/336 (0%)
 Frame = -1

Query: 1342 DQSGRWARVTFRIVVSYHGEYFDGWQKQPGLNTVQGLVERSIGKFIDERKAQQRKDKGLP 1163
            D++GRWAR TF+IV+SY G  FDGWQKQPGLNTVQGLVERS+GKF+DE+KAQ  KDK LP
Sbjct: 110  DKTGRWARATFKIVLSYDGNSFDGWQKQPGLNTVQGLVERSLGKFVDEKKAQMLKDKCLP 169

Query: 1162 VEGMAVVAGRTDKGVTALNQVCSFYTWRKDVRNEEIEHAINFAAPGKLRVVSVSQVSRAF 983
            +EG A+VAGRTDKGVTAL QVCSFYTWR DV+ ++IE +IN AAPGKLR  SVSQVSR F
Sbjct: 170  LEGCALVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTSSVSQVSRIF 229

Query: 982  HPNFCAKWRRYLYIFPFEEVDCRDQNNNAIEETGNMGFDNSHLLKRNVIVEDNAKDNIKN 803
            HPNF AKWRRYLYI P  + +  + ++   E   N   +  + +K      +   D I +
Sbjct: 230  HPNFSAKWRRYLYILPLNDGENMEPDSTTWENVENR--EEENFVKIEASNGEKCVDGIHD 287

Query: 802  HI---DEKDELDGIKKPTNFSIARVDQLLRQLEGKLLSYKMFARDTKAARNTGPSTECFV 632
            ++       EL    KP  FSI RV+QLLR+LEGKLLSYKMFARDTKA+RN GP TECFV
Sbjct: 288  NLVLSPNDQELVSADKPQTFSITRVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFV 347

Query: 631  YHARAAEAMIPSSNKDHVDASKVMCVELVANRFLRRMVRVLVATVVREAAAGADDDVLLR 452
            YHARAAE  +P   +       VMCVELVANRFLR+MVRVLVAT +REAAAGA +D LL 
Sbjct: 348  YHARAAETRLPCLEQG--VGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLE 405

Query: 451  LMEXXXXXXXXXXXXPDGLCLVDVGYSDFDPRLCFI 344
            LM+            PDGL LVDVGY+DFD ++CFI
Sbjct: 406  LMDATCRRATAPPAPPDGLSLVDVGYTDFDSQICFI 441