BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00025302
         (342 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001275393.1| single-stranded DNA-bindig protein WHY2, mit...   100   3e-19
ref|XP_002267315.1| PREDICTED: uncharacterized protein LOC100258...    99   8e-19
emb|CAN74120.1| hypothetical protein VITISV_034895 [Vitis vinifera]    99   8e-19
ref|XP_006478304.1| PREDICTED: single-stranded DNA-bindig protei...    98   1e-18
ref|XP_004250749.1| PREDICTED: single-stranded DNA-bindig protei...    98   1e-18
ref|XP_004250750.1| PREDICTED: single-stranded DNA-bindig protei...    97   2e-18
ref|XP_003626470.1| hypothetical protein MTR_7g116270 [Medicago ...    97   2e-18
pdb|3N1H|A Chain A, Crystal Structure Of Stwhy2 gi|302566180|pdb...    97   2e-18
gb|EPS66445.1| hypothetical protein M569_08332, partial [Genlise...    96   5e-18
pdb|3R9Y|A Chain A, Crystal Structure Of Stwhy2 K67a (Form I) gi...    95   1e-17
ref|XP_006352086.1| PREDICTED: Why2 protein [Solanum tuberosum]        94   1e-17
gb|AFK37234.1| unknown [Lotus japonicus]                               94   2e-17
ref|XP_004141520.1| PREDICTED: single-stranded DNA-bindig protei...    93   4e-17
ref|XP_004173597.1| PREDICTED: single-stranded DNA-bindig protei...    92   9e-17
ref|XP_006656631.1| PREDICTED: single-stranded DNA-binding prote...    90   4e-16
ref|XP_006646903.1| PREDICTED: single-stranded DNA-binding prote...    90   4e-16
pdb|4KOP|A Chain A, Crystal Structure Of Why2 From Arabidopsis T...    90   4e-16
gb|EMJ01725.1| hypothetical protein PRUPE_ppa011529mg [Prunus pe...    90   4e-16
gb|AAG51881.1|AC016162_2 unknown protein; 79476-81015 [Arabidops...    90   4e-16
ref|XP_002888827.1| ATWHY2 [Arabidopsis lyrata subsp. lyrata] gi...    90   4e-16

>ref|NP_001275393.1| single-stranded DNA-bindig protein WHY2, mitochondrial [Solanum
           tuberosum] gi|426021772|sp|D9J034.1|WHY2_SOLTU RecName:
           Full=Single-stranded DNA-bindig protein WHY2,
           mitochondrial; AltName: Full=Protein WHIRLY 2;
           Short=StWHY2; Flags: Precursor
           gi|298359665|gb|ADI77438.1| Why2 protein [Solanum
           tuberosum]
          Length = 238

 Score =  100 bits (248), Expect = 3e-19
 Identities = 49/87 (56%), Positives = 63/87 (72%), Gaps = 5/87 (5%)
 Frame = -3

Query: 247 YGGMSTVGQR-----GITNDRIYAAYNVYKGKAVLSAEPVPPKFSKVDSGGFKVNRPGFI 83
           + G STV Q      G    R++A Y+V+KGKA LSAEP  P F+++DSGG K+NR G I
Sbjct: 36  FAGFSTVRQNVVADAGKREGRVFAPYSVFKGKAALSAEPRLPTFNRLDSGGVKLNRRGVI 95

Query: 82  SLSFSPSIGERKYDWQKKQIFALSVTE 2
            L+F PS+GERKYDW+K+Q+FALS TE
Sbjct: 96  MLTFWPSVGERKYDWEKRQLFALSATE 122


>ref|XP_002267315.1| PREDICTED: uncharacterized protein LOC100258449 [Vitis vinifera]
           gi|297734756|emb|CBI16990.3| unnamed protein product
           [Vitis vinifera]
          Length = 231

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 46/73 (63%), Positives = 56/73 (76%)
 Frame = -3

Query: 220 RGITNDRIYAAYNVYKGKAVLSAEPVPPKFSKVDSGGFKVNRPGFISLSFSPSIGERKYD 41
           +G   DR+YA Y VYKGKA L+  PV PKFS++DSGG KV+R G + L FSP++GERKYD
Sbjct: 51  KGNYPDRVYAPYCVYKGKASLTVYPVLPKFSRLDSGGLKVDRHGVMMLQFSPAVGERKYD 110

Query: 40  WQKKQIFALSVTE 2
           W+KKQ FALS  E
Sbjct: 111 WEKKQFFALSAVE 123


>emb|CAN74120.1| hypothetical protein VITISV_034895 [Vitis vinifera]
          Length = 185

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 46/73 (63%), Positives = 56/73 (76%)
 Frame = -3

Query: 220 RGITNDRIYAAYNVYKGKAVLSAEPVPPKFSKVDSGGFKVNRPGFISLSFSPSIGERKYD 41
           +G   DR+YA Y VYKGKA L+  PV PKFS++DSGG KV+R G + L FSP++GERKYD
Sbjct: 51  KGNYPDRVYAPYCVYKGKASLTVYPVLPKFSRLDSGGLKVDRHGVMMLQFSPAVGERKYD 110

Query: 40  WQKKQIFALSVTE 2
           W+KKQ FALS  E
Sbjct: 111 WEKKQFFALSAVE 123


>ref|XP_006478304.1| PREDICTED: single-stranded DNA-bindig protein WHY2,
           mitochondrial-like isoform X1 [Citrus sinensis]
          Length = 240

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 55/115 (47%), Positives = 68/115 (59%), Gaps = 11/115 (9%)
 Frame = -3

Query: 313 STSGQVYGKSTVGQKSFTNDQV-------YGGMSTVGQ----RGITNDRIYAAYNVYKGK 167
           S+  Q+  K   G+ ++  D +         GMST G     +G    RI+A Y VYKGK
Sbjct: 10  SSRSQLSEKLLAGEANYVRDGLKSHVLISQAGMSTTGHDVSAKGSLGGRIFAPYYVYKGK 69

Query: 166 AVLSAEPVPPKFSKVDSGGFKVNRPGFISLSFSPSIGERKYDWQKKQIFALSVTE 2
           A  S +PV P F K+DSG  KV R G I L+F+P+IGERKYDW KKQ FALS TE
Sbjct: 70  AAFSVDPVLPTFMKLDSGDLKVKRKGVILLTFAPAIGERKYDWAKKQHFALSPTE 124


>ref|XP_004250749.1| PREDICTED: single-stranded DNA-bindig protein WHY2,
           mitochondrial-like isoform 1 [Solanum lycopersicum]
          Length = 238

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 45/76 (59%), Positives = 58/76 (76%)
 Frame = -3

Query: 229 VGQRGITNDRIYAAYNVYKGKAVLSAEPVPPKFSKVDSGGFKVNRPGFISLSFSPSIGER 50
           V   G    R++A Y+V+KGKA LSAEP  P F+++DSGG K+NR G I L+F PS+GER
Sbjct: 47  VADAGKREGRVFAPYSVFKGKAALSAEPRLPTFNRLDSGGVKLNRRGVIMLTFWPSVGER 106

Query: 49  KYDWQKKQIFALSVTE 2
           KYDW+K+Q+FALS TE
Sbjct: 107 KYDWEKRQLFALSATE 122


>ref|XP_004250750.1| PREDICTED: single-stranded DNA-bindig protein WHY2,
           mitochondrial-like isoform 2 [Solanum lycopersicum]
          Length = 235

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 48/86 (55%), Positives = 62/86 (72%), Gaps = 4/86 (4%)
 Frame = -3

Query: 247 YGGMSTVGQR----GITNDRIYAAYNVYKGKAVLSAEPVPPKFSKVDSGGFKVNRPGFIS 80
           +   STV Q     G    R++A Y+V+KGKA LSAEP  P F+++DSGG K+NR G I 
Sbjct: 34  FAAFSTVRQDVVADGKREGRVFAPYSVFKGKAALSAEPRLPTFNRLDSGGVKLNRRGVIM 93

Query: 79  LSFSPSIGERKYDWQKKQIFALSVTE 2
           L+F PS+GERKYDW+K+Q+FALS TE
Sbjct: 94  LTFWPSVGERKYDWEKRQLFALSATE 119


>ref|XP_003626470.1| hypothetical protein MTR_7g116270 [Medicago truncatula]
           gi|355501485|gb|AES82688.1| hypothetical protein
           MTR_7g116270 [Medicago truncatula]
           gi|388497124|gb|AFK36628.1| unknown [Medicago
           truncatula]
          Length = 226

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 45/73 (61%), Positives = 56/73 (76%)
 Frame = -3

Query: 220 RGITNDRIYAAYNVYKGKAVLSAEPVPPKFSKVDSGGFKVNRPGFISLSFSPSIGERKYD 41
           +G T+DRI+A Y+VYKGKA  S  P  P F+K+DSG   V+R G I +SF P+IGERKYD
Sbjct: 40  KGYTSDRIFAPYSVYKGKAAFSLSPCLPTFTKLDSGALVVDRHGSIMMSFMPAIGERKYD 99

Query: 40  WQKKQIFALSVTE 2
           W+K+QIFALS TE
Sbjct: 100 WEKRQIFALSATE 112


>pdb|3N1H|A Chain A, Crystal Structure Of Stwhy2 gi|302566180|pdb|3N1I|A Chain
           A, Crystal Structure Of A Stwhy2-Ere32 Complex
           gi|302566182|pdb|3N1J|A Chain A, Crystal Structure Of A
           Stwhy2-Dt32 Complex gi|302566184|pdb|3N1K|A Chain A,
           Crystal Structure Of A Stwhy2-Cere32 Complex
           gi|302566186|pdb|3N1L|A Chain A, Crystal Structure Of A
           Stwhy2-Rcere32 Complex
          Length = 178

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 46/79 (58%), Positives = 61/79 (77%)
 Frame = -3

Query: 238 MSTVGQRGITNDRIYAAYNVYKGKAVLSAEPVPPKFSKVDSGGFKVNRPGFISLSFSPSI 59
           M+  G+R     R++A Y+V+KGKA LSAEP  P F+++DSGG K+NR G I L+F PS+
Sbjct: 1   MADAGKR---EGRVFAPYSVFKGKAALSAEPRLPTFNRLDSGGVKLNRRGVIMLTFWPSV 57

Query: 58  GERKYDWQKKQIFALSVTE 2
           GERKYDW+K+Q+FALS TE
Sbjct: 58  GERKYDWEKRQLFALSATE 76


>gb|EPS66445.1| hypothetical protein M569_08332, partial [Genlisea aurea]
          Length = 187

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 40/67 (59%), Positives = 55/67 (82%)
 Frame = -3

Query: 202 RIYAAYNVYKGKAVLSAEPVPPKFSKVDSGGFKVNRPGFISLSFSPSIGERKYDWQKKQI 23
           R+YA Y+VYKGKA ++ EP PP+FS + SG FKV++ GF+ L F+P++G R+YDW +KQI
Sbjct: 6   RVYAGYSVYKGKAAITVEPRPPEFSSLGSGAFKVSKEGFVLLQFAPAVGSRQYDWTRKQI 65

Query: 22  FALSVTE 2
           F+LSVTE
Sbjct: 66  FSLSVTE 72


>pdb|3R9Y|A Chain A, Crystal Structure Of Stwhy2 K67a (Form I)
           gi|347948613|pdb|3R9Z|A Chain A, Crystal Structure Of
           Stwhy2 K67a (Form Ii) gi|347948614|pdb|3RA0|A Chain A,
           Crystal Structure Of A Stwhy2 K67a-Dt32 Complex
          Length = 178

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 45/79 (56%), Positives = 60/79 (75%)
 Frame = -3

Query: 238 MSTVGQRGITNDRIYAAYNVYKGKAVLSAEPVPPKFSKVDSGGFKVNRPGFISLSFSPSI 59
           M+  G+R     R++A Y+V+KG A LSAEP  P F+++DSGG K+NR G I L+F PS+
Sbjct: 1   MADAGKR---EGRVFAPYSVFKGAAALSAEPRLPTFNRLDSGGVKLNRRGVIMLTFWPSV 57

Query: 58  GERKYDWQKKQIFALSVTE 2
           GERKYDW+K+Q+FALS TE
Sbjct: 58  GERKYDWEKRQLFALSATE 76


>ref|XP_006352086.1| PREDICTED: Why2 protein [Solanum tuberosum]
          Length = 238

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 46/87 (52%), Positives = 60/87 (68%), Gaps = 5/87 (5%)
 Frame = -3

Query: 247 YGGMSTVGQR-----GITNDRIYAAYNVYKGKAVLSAEPVPPKFSKVDSGGFKVNRPGFI 83
           + G STV Q      G    R++A Y+V+KGKA LSAEP  P F+++DSGG K+NR G I
Sbjct: 36  FAGFSTVRQNVVADAGKREGRVFAPYSVFKGKAALSAEPRLPTFNRLDSGGVKLNRRGVI 95

Query: 82  SLSFSPSIGERKYDWQKKQIFALSVTE 2
            L+F PS+GERKYDW+K+Q+  L  TE
Sbjct: 96  MLTFWPSVGERKYDWEKRQVMCLYATE 122


>gb|AFK37234.1| unknown [Lotus japonicus]
          Length = 235

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 43/73 (58%), Positives = 54/73 (73%)
 Frame = -3

Query: 220 RGITNDRIYAAYNVYKGKAVLSAEPVPPKFSKVDSGGFKVNRPGFISLSFSPSIGERKYD 41
           +G T DR++A Y VYKGKA +S  PV P F+K+DSG   V R G I + F+P+IGERKYD
Sbjct: 44  KGYTTDRVFAPYYVYKGKAAMSLSPVLPTFTKLDSGALVVERRGSIMMVFTPAIGERKYD 103

Query: 40  WQKKQIFALSVTE 2
           W+K+Q FALS TE
Sbjct: 104 WEKRQKFALSATE 116


>ref|XP_004141520.1| PREDICTED: single-stranded DNA-bindig protein WHY2,
           mitochondrial-like [Cucumis sativus]
          Length = 241

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 41/67 (61%), Positives = 55/67 (82%)
 Frame = -3

Query: 202 RIYAAYNVYKGKAVLSAEPVPPKFSKVDSGGFKVNRPGFISLSFSPSIGERKYDWQKKQI 23
           R++A+Y+VYKGKA LS EP  P F+KV+SG F ++R G I L+F+P++GERKYDW +KQ+
Sbjct: 58  RVFASYHVYKGKAALSMEPCMPTFTKVESGNFIMDRRGSIMLTFAPAVGERKYDWTRKQL 117

Query: 22  FALSVTE 2
           FALS TE
Sbjct: 118 FALSATE 124


>ref|XP_004173597.1| PREDICTED: single-stranded DNA-bindig protein WHY2,
           mitochondrial-like, partial [Cucumis sativus]
          Length = 156

 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 41/67 (61%), Positives = 54/67 (80%)
 Frame = -3

Query: 202 RIYAAYNVYKGKAVLSAEPVPPKFSKVDSGGFKVNRPGFISLSFSPSIGERKYDWQKKQI 23
           R++A+Y VYKGKA LS EP  P F+KV+SG F ++R G I L+F+P++GERKYDW +KQ+
Sbjct: 12  RVFASYYVYKGKAALSMEPCMPTFTKVESGNFIMDRRGSIMLTFAPAVGERKYDWTRKQL 71

Query: 22  FALSVTE 2
           FALS TE
Sbjct: 72  FALSATE 78


>ref|XP_006656631.1| PREDICTED: single-stranded DNA-binding protein WHY1,
           chloroplastic-like, partial [Oryza brachyantha]
          Length = 201

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 36/72 (50%), Positives = 55/72 (76%)
 Frame = -3

Query: 217 GITNDRIYAAYNVYKGKAVLSAEPVPPKFSKVDSGGFKVNRPGFISLSFSPSIGERKYDW 38
           G  N R+++ Y++YKGKA LS +P PP+F+ +DSG +KV + GF+ L F+P++  R+YDW
Sbjct: 15  GTQNGRVFSTYSIYKGKAALSLDPSPPQFAPLDSGAYKVVKEGFVLLQFAPAVATRQYDW 74

Query: 37  QKKQIFALSVTE 2
            +KQ+F+LSV E
Sbjct: 75  TRKQVFSLSVWE 86


>ref|XP_006646903.1| PREDICTED: single-stranded DNA-binding protein WHY2,
           mitochondrial-like [Oryza brachyantha]
          Length = 230

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 43/79 (54%), Positives = 59/79 (74%)
 Frame = -3

Query: 238 MSTVGQRGITNDRIYAAYNVYKGKAVLSAEPVPPKFSKVDSGGFKVNRPGFISLSFSPSI 59
           +ST+     T+ R +A+Y V+KGKA LS  PV P FSK++SGG +V+R G + L+F P++
Sbjct: 35  LSTLSADENTSGRKFASYTVFKGKAALSMHPVLPSFSKLESGGSRVSRNGSVMLTFFPAV 94

Query: 58  GERKYDWQKKQIFALSVTE 2
           G+RKYD+ KKQIFALS TE
Sbjct: 95  GQRKYDYSKKQIFALSPTE 113


>pdb|4KOP|A Chain A, Crystal Structure Of Why2 From Arabidopsis Thaliana
           gi|557805000|pdb|4KOP|B Chain B, Crystal Structure Of
           Why2 From Arabidopsis Thaliana gi|557805001|pdb|4KOP|C
           Chain C, Crystal Structure Of Why2 From Arabidopsis
           Thaliana gi|557805002|pdb|4KOP|D Chain D, Crystal
           Structure Of Why2 From Arabidopsis Thaliana
          Length = 177

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 38/67 (56%), Positives = 54/67 (80%)
 Frame = -3

Query: 202 RIYAAYNVYKGKAVLSAEPVPPKFSKVDSGGFKVNRPGFISLSFSPSIGERKYDWQKKQI 23
           R++A Y+++KGKA LS EPV P F+++DSG  +++R G + ++F P+IGERKYDW+KKQ 
Sbjct: 10  RLFAPYSIFKGKAALSVEPVLPSFTEIDSGNLRIDRRGSLMMTFMPAIGERKYDWEKKQK 69

Query: 22  FALSVTE 2
           FALS TE
Sbjct: 70  FALSPTE 76


>gb|EMJ01725.1| hypothetical protein PRUPE_ppa011529mg [Prunus persica]
          Length = 207

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 38/73 (52%), Positives = 55/73 (75%)
 Frame = -3

Query: 220 RGITNDRIYAAYNVYKGKAVLSAEPVPPKFSKVDSGGFKVNRPGFISLSFSPSIGERKYD 41
           +G +   ++A++N++KGKA LS  PV P F+K++SG   V+R G + L F+P+IGERKYD
Sbjct: 20  KGTSAHNVFASFNIFKGKAALSLNPVLPTFTKLESGNLVVSRRGVVMLKFTPAIGERKYD 79

Query: 40  WQKKQIFALSVTE 2
           W+K Q+FALS TE
Sbjct: 80  WEKNQVFALSATE 92


>gb|AAG51881.1|AC016162_2 unknown protein; 79476-81015 [Arabidopsis thaliana]
          Length = 237

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 38/67 (56%), Positives = 54/67 (80%)
 Frame = -3

Query: 202 RIYAAYNVYKGKAVLSAEPVPPKFSKVDSGGFKVNRPGFISLSFSPSIGERKYDWQKKQI 23
           R++A Y+++KGKA LS EPV P F+++DSG  +++R G + ++F P+IGERKYDW+KKQ 
Sbjct: 52  RLFAPYSIFKGKAALSVEPVLPSFTEIDSGNLRIDRRGSLMMTFMPAIGERKYDWEKKQK 111

Query: 22  FALSVTE 2
           FALS TE
Sbjct: 112 FALSPTE 118


>ref|XP_002888827.1| ATWHY2 [Arabidopsis lyrata subsp. lyrata]
           gi|297334668|gb|EFH65086.1| ATWHY2 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 242

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 38/67 (56%), Positives = 54/67 (80%)
 Frame = -3

Query: 202 RIYAAYNVYKGKAVLSAEPVPPKFSKVDSGGFKVNRPGFISLSFSPSIGERKYDWQKKQI 23
           R++A Y+++KGKA LS EPV P F+++DSG  +++R G + ++F P+IGERKYDW+KKQ 
Sbjct: 57  RLFAPYSIFKGKAALSVEPVLPSFTEIDSGNLRIDRRGSLMMTFMPAIGERKYDWEKKQK 116

Query: 22  FALSVTE 2
           FALS TE
Sbjct: 117 FALSPTE 123