BLASTX nr result
ID: Achyranthes23_contig00024951
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Achyranthes23_contig00024951
(786 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002267800.1| PREDICTED: DNA-directed RNA polymerases I, I... 110 5e-22
ref|XP_003534102.1| PREDICTED: DNA-directed RNA polymerases II, ... 108 2e-21
gb|EOY26301.1| DNA directed RNA polymerase, 7 kDa subunit [Theob... 105 1e-20
emb|CBI25651.3| unnamed protein product [Vitis vinifera] 105 1e-20
ref|XP_006392763.1| hypothetical protein EUTSA_v10011934mg [Eutr... 105 2e-20
ref|XP_004137531.1| PREDICTED: DNA-directed RNA polymerases I, I... 105 2e-20
ref|XP_003595899.1| DNA-directed RNA polymerases I, II, and III ... 105 2e-20
tpg|DAA60457.1| TPA: DNA-directed RNA polymerase I, II, and III ... 105 2e-20
ref|NP_198917.1| DNA-directed RNA polymerase NRPB12/NRPD12/NRPE1... 103 9e-20
ref|XP_006405406.1| hypothetical protein EUTSA_v10028022mg [Eutr... 102 1e-19
ref|XP_004248221.1| PREDICTED: DNA-directed RNA polymerases I, I... 102 1e-19
ref|NP_001151371.1| LOC100285004 [Zea mays] gi|297720059|ref|NP_... 102 1e-19
ref|XP_002870659.1| predicted protein [Arabidopsis lyrata subsp.... 102 1e-19
ref|XP_006284887.1| hypothetical protein CARUB_v10006178mg, part... 101 3e-19
ref|XP_004492394.1| PREDICTED: DNA-directed RNA polymerases I, I... 100 6e-19
ref|XP_002264322.1| PREDICTED: DNA-directed RNA polymerases I, I... 100 6e-19
ref|XP_004972669.1| PREDICTED: DNA-directed RNA polymerases I, I... 100 7e-19
gb|AFK41236.1| unknown [Medicago truncatula] 100 7e-19
ref|XP_003563174.1| PREDICTED: DNA-directed RNA polymerases I, I... 100 1e-18
dbj|BAJ97697.1| predicted protein [Hordeum vulgare subsp. vulgare] 100 1e-18
>ref|XP_002267800.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC4-like [Vitis vinifera]
gi|225468167|ref|XP_002272054.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit RPABC4 [Vitis
vinifera] gi|297738145|emb|CBI27346.3| unnamed protein
product [Vitis vinifera]
Length = 51
Score = 110 bits (275), Expect = 5e-22
Identities = 49/49 (100%), Positives = 49/49 (100%)
Frame = +2
Query: 140 MDPQPEPVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYE 286
MDPQPEPVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYE
Sbjct: 1 MDPQPEPVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYE 49
>ref|XP_003534102.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
12-like [Glycine max] gi|356560019|ref|XP_003548293.1|
PREDICTED: DNA-directed RNA polymerases II, IV and V
subunit 12 [Glycine max]
gi|567912183|ref|XP_006448405.1| hypothetical protein
CICLE_v10017429mg [Citrus clementina]
gi|255630274|gb|ACU15492.1| unknown [Glycine max]
gi|557551016|gb|ESR61645.1| hypothetical protein
CICLE_v10017429mg [Citrus clementina]
gi|561025849|gb|ESW24534.1| hypothetical protein
PHAVU_004G138700g [Phaseolus vulgaris]
Length = 51
Score = 108 bits (270), Expect = 2e-21
Identities = 48/49 (97%), Positives = 48/49 (97%)
Frame = +2
Query: 140 MDPQPEPVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYE 286
MDPQPEPVSYICGDCG ENTLKPGDVIQCRECGYRILYKKRTRRIVQYE
Sbjct: 1 MDPQPEPVSYICGDCGMENTLKPGDVIQCRECGYRILYKKRTRRIVQYE 49
>gb|EOY26301.1| DNA directed RNA polymerase, 7 kDa subunit [Theobroma cacao]
Length = 51
Score = 105 bits (263), Expect = 1e-20
Identities = 47/49 (95%), Positives = 48/49 (97%)
Frame = +2
Query: 140 MDPQPEPVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYE 286
MDPQPEPV+YICGDCGQENTLK GDVIQCRECGYRILYKKRTRRIVQYE
Sbjct: 1 MDPQPEPVTYICGDCGQENTLKHGDVIQCRECGYRILYKKRTRRIVQYE 49
>emb|CBI25651.3| unnamed protein product [Vitis vinifera]
Length = 82
Score = 105 bits (263), Expect = 1e-20
Identities = 47/47 (100%), Positives = 47/47 (100%)
Frame = +2
Query: 140 MDPQPEPVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQ 280
MDPQPEPVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQ
Sbjct: 1 MDPQPEPVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQ 47
>ref|XP_006392763.1| hypothetical protein EUTSA_v10011934mg [Eutrema salsugineum]
gi|567131670|ref|XP_006392764.1| hypothetical protein
EUTSA_v10011934mg [Eutrema salsugineum]
gi|567131674|ref|XP_006392765.1| hypothetical protein
EUTSA_v10011934mg [Eutrema salsugineum]
gi|557089341|gb|ESQ30049.1| hypothetical protein
EUTSA_v10011934mg [Eutrema salsugineum]
gi|557089342|gb|ESQ30050.1| hypothetical protein
EUTSA_v10011934mg [Eutrema salsugineum]
gi|557089343|gb|ESQ30051.1| hypothetical protein
EUTSA_v10011934mg [Eutrema salsugineum]
Length = 51
Score = 105 bits (262), Expect = 2e-20
Identities = 45/49 (91%), Positives = 48/49 (97%)
Frame = +2
Query: 140 MDPQPEPVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYE 286
MDPQPEPV+Y+CGDCGQENTLK GDVIQCRECGYRILYKKRTRR+VQYE
Sbjct: 1 MDPQPEPVTYVCGDCGQENTLKSGDVIQCRECGYRILYKKRTRRVVQYE 49
>ref|XP_004137531.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC4-like [Cucumis sativus]
gi|449516854|ref|XP_004165461.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit RPABC4-like
[Cucumis sativus]
Length = 51
Score = 105 bits (262), Expect = 2e-20
Identities = 47/49 (95%), Positives = 47/49 (95%)
Frame = +2
Query: 140 MDPQPEPVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYE 286
MDPQPEPVSYICGDCG ENTLK GDVIQCRECGYRILYKKRTRRIVQYE
Sbjct: 1 MDPQPEPVSYICGDCGMENTLKQGDVIQCRECGYRILYKKRTRRIVQYE 49
>ref|XP_003595899.1| DNA-directed RNA polymerases I, II, and III subunit RPABC4
[Medicago truncatula] gi|355484947|gb|AES66150.1|
DNA-directed RNA polymerases I, II, and III subunit
RPABC4 [Medicago truncatula]
Length = 121
Score = 105 bits (262), Expect = 2e-20
Identities = 47/54 (87%), Positives = 49/54 (90%)
Frame = +2
Query: 125 FITAVMDPQPEPVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYE 286
FI VMDP PEPVSY+CGDCG ENTLK GDVIQCR+CGYRILYKKRTRRIVQYE
Sbjct: 9 FIVGVMDPLPEPVSYLCGDCGVENTLKSGDVIQCRDCGYRILYKKRTRRIVQYE 62
Score = 71.2 bits (173), Expect = 4e-10
Identities = 29/49 (59%), Positives = 36/49 (73%)
Frame = +2
Query: 140 MDPQPEPVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYE 286
MDP P+P+ Y+CGDCG E L V+QC C Y+ILYKKRT R++QYE
Sbjct: 71 MDPPPQPIRYLCGDCGAETPLYTDGVLQCCVCFYKILYKKRTHRVLQYE 119
>tpg|DAA60457.1| TPA: DNA-directed RNA polymerase I, II, and III polypeptide isoform
1, partial [Zea mays] gi|414884444|tpg|DAA60458.1| TPA:
DNA-directed RNA polymerase I, II, and III polypeptide
isoform 2, partial [Zea mays]
Length = 100
Score = 105 bits (261), Expect = 2e-20
Identities = 49/60 (81%), Positives = 51/60 (85%), Gaps = 1/60 (1%)
Frame = +2
Query: 110 CRLHYFITAVMDPQ-PEPVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYE 286
CR + MDPQ PEPVSY+CGDCG ENTLKPGDVIQCRECGYRILYKKRTRRIVQYE
Sbjct: 39 CRRKTLERSTMDPQQPEPVSYLCGDCGAENTLKPGDVIQCRECGYRILYKKRTRRIVQYE 98
>ref|NP_198917.1| DNA-directed RNA polymerase NRPB12/NRPD12/NRPE12 [Arabidopsis
thaliana] gi|75171496|sp|Q9FLM8.1|NRPBC_ARATH RecName:
Full=DNA-directed RNA polymerases II, IV and V subunit
12; AltName: Full=DNA-directed RNA Polymerase II subunit
K gi|9759147|dbj|BAB09703.1| unnamed protein product
[Arabidopsis thaliana] gi|15028303|gb|AAK76628.1|
unknown protein [Arabidopsis thaliana]
gi|19310615|gb|AAL85038.1| unknown protein [Arabidopsis
thaliana] gi|21618239|gb|AAM67289.1| DNA directed RNA
polymerase II polypeptide K [Arabidopsis thaliana]
gi|332007242|gb|AED94625.1| DNA-directed RNA polymerase
NRPB12/NRPD12/NRPE12 [Arabidopsis thaliana]
Length = 51
Score = 103 bits (256), Expect = 9e-20
Identities = 44/49 (89%), Positives = 47/49 (95%)
Frame = +2
Query: 140 MDPQPEPVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYE 286
MDP PEPV+Y+CGDCGQENTLK GDVIQCRECGYRILYKKRTRR+VQYE
Sbjct: 1 MDPAPEPVTYVCGDCGQENTLKSGDVIQCRECGYRILYKKRTRRVVQYE 49
>ref|XP_006405406.1| hypothetical protein EUTSA_v10028022mg [Eutrema salsugineum]
gi|557106544|gb|ESQ46859.1| hypothetical protein
EUTSA_v10028022mg [Eutrema salsugineum]
Length = 51
Score = 102 bits (255), Expect = 1e-19
Identities = 44/49 (89%), Positives = 47/49 (95%)
Frame = +2
Query: 140 MDPQPEPVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYE 286
MDP PEPV+Y+CGDCGQENTLK GDVIQCRECGYRILYKKRTRR+VQYE
Sbjct: 1 MDPLPEPVTYVCGDCGQENTLKSGDVIQCRECGYRILYKKRTRRVVQYE 49
>ref|XP_004248221.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC4-like [Solanum lycopersicum]
Length = 52
Score = 102 bits (255), Expect = 1e-19
Identities = 48/50 (96%), Positives = 48/50 (96%), Gaps = 1/50 (2%)
Frame = +2
Query: 140 MDPQP-EPVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYE 286
MD QP EPVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYE
Sbjct: 1 MDSQPVEPVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYE 50
>ref|NP_001151371.1| LOC100285004 [Zea mays] gi|297720059|ref|NP_001172391.1|
Os01g0530366 [Oryza sativa Japonica Group]
gi|297723715|ref|NP_001174221.1| Os05g0151800 [Oryza
sativa Japonica Group] gi|242048352|ref|XP_002461922.1|
hypothetical protein SORBIDRAFT_02g010660 [Sorghum
bicolor] gi|242078439|ref|XP_002443988.1| hypothetical
protein SORBIDRAFT_07g005435 [Sorghum bicolor]
gi|514726952|ref|XP_004956106.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit RPABC4-like
[Setaria italica] gi|195609858|gb|ACG26759.1|
DNA-directed RNA polymerases I, II, and III 7.3 kDa
polypeptide [Zea mays] gi|195620974|gb|ACG32317.1|
DNA-directed RNA polymerases I, II, and III 7.3 kDa
polypeptide [Zea mays] gi|195645780|gb|ACG42358.1|
DNA-directed RNA polymerases I, II, and III 7.3 kDa
polypeptide [Zea mays] gi|195646246|gb|ACG42591.1|
DNA-directed RNA polymerases I, II, and III 7.3 kDa
polypeptide [Zea mays] gi|218188380|gb|EEC70807.1|
hypothetical protein OsI_02267 [Oryza sativa Indica
Group] gi|222618595|gb|EEE54727.1| hypothetical protein
OsJ_02072 [Oryza sativa Japonica Group]
gi|241925299|gb|EER98443.1| hypothetical protein
SORBIDRAFT_02g010660 [Sorghum bicolor]
gi|241940338|gb|EES13483.1| hypothetical protein
SORBIDRAFT_07g005435 [Sorghum bicolor]
gi|255673311|dbj|BAH91121.1| Os01g0530366 [Oryza sativa
Japonica Group] gi|255676033|dbj|BAH92949.1|
Os05g0151800 [Oryza sativa Japonica Group]
Length = 52
Score = 102 bits (255), Expect = 1e-19
Identities = 47/50 (94%), Positives = 48/50 (96%), Gaps = 1/50 (2%)
Frame = +2
Query: 140 MDPQ-PEPVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYE 286
MDPQ PEPVSY+CGDCG ENTLKPGDVIQCRECGYRILYKKRTRRIVQYE
Sbjct: 1 MDPQQPEPVSYLCGDCGAENTLKPGDVIQCRECGYRILYKKRTRRIVQYE 50
>ref|XP_002870659.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297316495|gb|EFH46918.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 52
Score = 102 bits (254), Expect = 1e-19
Identities = 45/50 (90%), Positives = 49/50 (98%), Gaps = 1/50 (2%)
Frame = +2
Query: 140 MDP-QPEPVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYE 286
M+P QPEPV+Y+CGDCGQENTLKPGDVIQCRECGYRILYKKRTRR+VQYE
Sbjct: 1 MEPAQPEPVTYVCGDCGQENTLKPGDVIQCRECGYRILYKKRTRRVVQYE 50
>ref|XP_006284887.1| hypothetical protein CARUB_v10006178mg, partial [Capsella rubella]
gi|482553592|gb|EOA17785.1| hypothetical protein
CARUB_v10006178mg, partial [Capsella rubella]
Length = 68
Score = 101 bits (252), Expect = 3e-19
Identities = 43/47 (91%), Positives = 46/47 (97%)
Frame = +2
Query: 146 PQPEPVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYE 286
P PEPV+Y+CGDCGQENTLKPGDVIQCRECGYRILYKKRTRR+VQYE
Sbjct: 20 PLPEPVTYVCGDCGQENTLKPGDVIQCRECGYRILYKKRTRRVVQYE 66
>ref|XP_004492394.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC4-like [Cicer arietinum]
Length = 51
Score = 100 bits (249), Expect = 6e-19
Identities = 43/49 (87%), Positives = 47/49 (95%)
Frame = +2
Query: 140 MDPQPEPVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYE 286
MDPQPEPVSY+CGDCG ENT+K GDVI+CR+CGYRILYKKRTRRIVQYE
Sbjct: 1 MDPQPEPVSYLCGDCGVENTIKSGDVIRCRDCGYRILYKKRTRRIVQYE 49
>ref|XP_002264322.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC4 isoform 2 [Vitis vinifera]
gi|298204812|emb|CBI25645.3| unnamed protein product
[Vitis vinifera]
Length = 51
Score = 100 bits (249), Expect = 6e-19
Identities = 46/49 (93%), Positives = 46/49 (93%)
Frame = +2
Query: 140 MDPQPEPVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYE 286
MD QPEPVSYICGDCGQENTLK GDVIQCRECGY ILYKKRTRRIVQYE
Sbjct: 1 MDSQPEPVSYICGDCGQENTLKLGDVIQCRECGYCILYKKRTRRIVQYE 49
>ref|XP_004972669.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC4-like [Setaria italica]
Length = 52
Score = 100 bits (248), Expect = 7e-19
Identities = 45/50 (90%), Positives = 47/50 (94%), Gaps = 1/50 (2%)
Frame = +2
Query: 140 MDPQ-PEPVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYE 286
MDPQ PEPVSY+CGDCG ENTLKPGDVIQCR+CGYRILYKKRT RIVQYE
Sbjct: 1 MDPQQPEPVSYLCGDCGSENTLKPGDVIQCRDCGYRILYKKRTHRIVQYE 50
>gb|AFK41236.1| unknown [Medicago truncatula]
Length = 51
Score = 100 bits (248), Expect = 7e-19
Identities = 44/49 (89%), Positives = 46/49 (93%)
Frame = +2
Query: 140 MDPQPEPVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYE 286
MDP PEPVSY+CGDCG ENTLK GDVIQCR+CGYRILYKKRTRRIVQYE
Sbjct: 1 MDPLPEPVSYLCGDCGVENTLKSGDVIQCRDCGYRILYKKRTRRIVQYE 49
>ref|XP_003563174.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC4-like [Brachypodium distachyon]
gi|357145250|ref|XP_003573577.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit RPABC4-like
[Brachypodium distachyon]
Length = 52
Score = 99.8 bits (247), Expect = 1e-18
Identities = 46/50 (92%), Positives = 47/50 (94%), Gaps = 1/50 (2%)
Frame = +2
Query: 140 MDPQ-PEPVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYE 286
MDPQ PEPVSY+CGDCG ENTLK GDVIQCRECGYRILYKKRTRRIVQYE
Sbjct: 1 MDPQQPEPVSYLCGDCGAENTLKSGDVIQCRECGYRILYKKRTRRIVQYE 50
>dbj|BAJ97697.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 52
Score = 99.8 bits (247), Expect = 1e-18
Identities = 46/50 (92%), Positives = 47/50 (94%), Gaps = 1/50 (2%)
Frame = +2
Query: 140 MDPQ-PEPVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYE 286
MDPQ PEPVSY+CGDCG ENTLK GDVIQCRECGYRILYKKRTRRIVQYE
Sbjct: 1 MDPQQPEPVSYLCGDCGAENTLKTGDVIQCRECGYRILYKKRTRRIVQYE 50