BLASTX nr result

ID: Achyranthes23_contig00023442 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00023442
         (351 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521950.1| synovial sarcoma associated ss18 protein, pu...    55   9e-06

>ref|XP_002521950.1| synovial sarcoma associated ss18 protein, putative [Ricinus
           communis] gi|223538754|gb|EEF40354.1| synovial sarcoma
           associated ss18 protein, putative [Ricinus communis]
          Length = 219

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 43/102 (42%), Positives = 51/102 (50%), Gaps = 19/102 (18%)
 Frame = -3

Query: 349 QQAYPTLQQSEALHPSQIRMNSAGSSGLNMLQGEPHCSVSSGML--GGYPDFVR------ 194
           QQ Y  LQQ +ALH SQ+ M+S GS GL+MLQ E   +  SG L  GG+PDF R      
Sbjct: 119 QQQYAALQQQQALH-SQLGMSSGGSPGLHMLQSEASTAGGSGGLGAGGFPDFGRDASGRG 177

Query: 193 ----IKQDM-------XXXXXXXXXXXXXGEPLYLKSGEQGN 101
                KQDM                    GE LYLKS ++GN
Sbjct: 178 MAGGSKQDMGNAGSGEGRGGNSGGQGSDGGENLYLKSADEGN 219


Top