BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00022863
         (915 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABM55240.1| retrotransposon protein [Beta vulgaris]                293   6e-77
gb|AEV42258.1| hypothetical protein [Beta vulgaris]                   293   8e-77
gb|ABA96007.1| retrotransposon protein, putative, Ty3-gypsy subc...   253   9e-65
gb|ADB85337.1| putative retrotransposon protein [Phyllostachys e...   252   2e-64
gb|AAN04919.1| Putative polyprotein [Oryza sativa Japonica Group...   247   5e-63
gb|AAL69439.1|AC098565_21 Putative polyprotein [Oryza sativa]         247   5e-63
gb|ABF96568.1| retrotransposon protein, putative, Ty3-gypsy subc...   244   3e-62
gb|AAS90689.2| putative polyprotein [Oryza sativa Japonica Group]     244   4e-62
gb|AAM74399.1|AC119149_14 Putative retroelement [Oryza sativa Ja...   243   1e-61
gb|ABA97776.1| retrotransposon protein, putative, Ty3-gypsy subc...   241   2e-61
gb|AAV31295.1| putative polyprotein [Oryza sativa Japonica Group]     241   3e-61
gb|AAT85240.1| putative polyprotein [Oryza sativa Japonica Group]     241   3e-61
gb|AAT81665.1| putative retrotransposon protein [Oryza sativa Ja...   241   4e-61
gb|AAT81698.1| putative retrotransposon protein, 5'-partial [Ory...   241   4e-61
gb|AAQ56379.1| putative polyprotein [Oryza sativa Japonica Group]     241   4e-61
gb|ABG66286.1| retrotransposon protein, putative, Ty3-gypsy subc...   240   6e-61
dbj|BAH79971.1| hypothetical protein [Oryza sativa Indica Group]      239   8e-61
gb|ABA98194.1| retrotransposon protein, putative, Ty3-gypsy subc...   239   1e-60
gb|AAM01156.1|AC113336_8 Putative retroelement [Oryza sativa Jap...   239   1e-60
gb|ABA98185.1| retrotransposon protein, putative, Ty3-gypsy subc...   238   2e-60

>gb|ABM55240.1| retrotransposon protein [Beta vulgaris]
          Length = 1501

 Score =  293 bits (750), Expect = 6e-77
 Identities = 156/305 (51%), Positives = 212/305 (69%), Gaps = 4/305 (1%)
 Frame = +1

Query: 13   SVAEIRTFLGLDGYYRRFLKDFSRIARPLTQLLRKNNKF*WSVQC*EAFQELKKRLTSAP 192
            SV +IR+FLGL GYYRRF++DFS+IARP+T L++K  KF W+ +C EAFQ LK RLT+AP
Sbjct: 786  SVTDIRSFLGLAGYYRRFVRDFSKIARPMTNLMKKETKFEWNEKCEEAFQILKDRLTTAP 845

Query: 193  VLTQPTEGVEFDVYSDASKNGLGCVLMQQGKVIVYASRQLKVHEQNYPTHDLELAAVVFA 372
            VLT P     F+VYSDASKNGLGCVL Q GKVI YAS QLK +E NYPTHDLELAA+VFA
Sbjct: 846  VLTLPDGNEGFEVYSDASKNGLGCVLQQNGKVIAYASCQLKPYEANYPTHDLELAAIVFA 905

Query: 373  LKIWRHYL--LWCYL*VLHRPQEPEIHLYTEK-VEPEAEKVVGVDE*L*YEFELS*GKAN 543
            LKIWRHYL    C +   H+  +   +++T+K +     + + + +    + +   GKAN
Sbjct: 906  LKIWRHYLYGATCKIFTDHKSLK---YIFTQKDLNMRQRRWLELIKDYDLDIQYHEGKAN 962

Query: 544  VVVDALSRKTKHSLSSAMVLSK*LCEDIRRMGIELFHHGEASVRLNALSMEPEL*ADLRL 723
            VV DALSRK+ HSLS+ +++ + LC D++R+ +E+ + GE+  RL+ LS+   +  ++  
Sbjct: 963  VVADALSRKSSHSLST-LIVPEELCRDMKRLNLEILNPGESEARLSNLSLGVSIFDEIIE 1021

Query: 724  KQRQDPKLEAIRKAKVNGEAFDFHIEADDSLKFRGRWCVPNDV-ELKRHILDEAHSTPYS 900
             Q  D  L+ I++    G+  DF I  D SL+F+GRWCVP    +LKR ++DE H+TPYS
Sbjct: 1022 GQVGDEHLDKIKEKMKQGKEIDFKIHEDGSLRFKGRWCVPQKCNDLKRRLMDEGHNTPYS 1081

Query: 901  VHPGG 915
            VHPGG
Sbjct: 1082 VHPGG 1086


>gb|AEV42258.1| hypothetical protein [Beta vulgaris]
          Length = 1553

 Score =  293 bits (749), Expect = 8e-77
 Identities = 157/305 (51%), Positives = 211/305 (69%), Gaps = 4/305 (1%)
 Frame = +1

Query: 13   SVAEIRTFLGLDGYYRRFLKDFSRIARPLTQLLRKNNKF*WSVQC*EAFQELKKRLTSAP 192
            +V +IR+FLGL GYYRRF+KDFS+IA+P+T L++K+ +F W+    +AFQ LK+RLTSAP
Sbjct: 818  NVTDIRSFLGLAGYYRRFVKDFSKIAKPMTNLMKKDCRFTWNEDSEKAFQTLKERLTSAP 877

Query: 193  VLTQPTEGVEFDVYSDASKNGLGCVLMQQGKVIVYASRQLKVHEQNYPTHDLELAAVVFA 372
            VLT P     +DVYSDASKNGLGCVLMQ GKVI YASRQLK +E NYPTHDLELAA+VFA
Sbjct: 878  VLTLPNGNEGYDVYSDASKNGLGCVLMQNGKVIAYASRQLKPYEVNYPTHDLELAAIVFA 937

Query: 373  LKIWRHYL--LWCYL*VLHRPQEPEIHLYTEK-VEPEAEKVVGVDE*L*YEFELS*GKAN 543
            LKIWRHYL  + C +   H+  +   +++T+K +     + + + +    + +   GKAN
Sbjct: 938  LKIWRHYLYGVTCRIFTDHKSLK---YIFTQKDLNMRQRRWLELIKDYDLDIQYHEGKAN 994

Query: 544  VVVDALSRKTKHSLSSAMVLSK*LCEDIRRMGIELFHHGEASVRLNALSMEPEL*ADLRL 723
            VV DALSRK+ HSL++ +V  K LCE+  R+ IE+ H GE    L+AL++EP    ++R 
Sbjct: 995  VVADALSRKSSHSLNTLVVADK-LCEEFSRLQIEVVHEGEVERLLSALTIEPNFLEEIRA 1053

Query: 724  KQRQDPKLEAIRKAKVNGEAFDFHIEADDSLKFRGRWCVPNDV-ELKRHILDEAHSTPYS 900
             Q  D KLE ++     G+A  F I  D S++++GRWCVP    ELK+ I+ E H+T Y 
Sbjct: 1054 SQPGDVKLERVKAKLKEGKAEGFAIHEDGSIRYKGRWCVPQKCEELKQKIMSEGHNTTYY 1113

Query: 901  VHPGG 915
            VHPGG
Sbjct: 1114 VHPGG 1118


>gb|ABA96007.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1197

 Score =  253 bits (645), Expect = 9e-65
 Identities = 142/307 (46%), Positives = 199/307 (64%), Gaps = 7/307 (2%)
 Frame = +1

Query: 13   SVAEIRTFLGLDGYYRRFLKDFSRIARPLTQLLRKNNKF*WSVQC*EAFQELKKRLTSAP 192
            +V++IR+FLGL GYYRRF+++FSRIARP+TQLL+KN KF W+ +C ++F++LKK+L +AP
Sbjct: 701  TVSQIRSFLGLAGYYRRFIENFSRIARPMTQLLKKNEKFKWTAECDQSFEKLKKKLVTAP 760

Query: 193  VLTQPTEGVEFDVYSDASKNGLGCVLMQQGKVIVYASRQLKVHEQNYPTHDLELAAVVFA 372
            VL  P +  +F VY DAS++GLGCVLMQ+G+V+ YASRQL+ HE NYPTHDLELAAVV A
Sbjct: 761  VLILPDQTKDFQVYYDASRHGLGCVLMQEGRVVAYASRQLRPHEGNYPTHDLELAAVVHA 820

Query: 373  LKIWRHYLLW--CYL*VLHRPQEPEIHLYTE-----KVEPEAEKVVGVDE*L*YEFELS* 531
            LKIWRHYL+   C +   H+  +   +++T+     +     E +   D  + Y      
Sbjct: 821  LKIWRHYLIGNRCEVYTDHKSLK---YIFTQLDLNLRQRRWLELIKDYDMSIHYH----P 873

Query: 532  GKANVVVDALSRKTKHSLSSAMVLSK*LCEDIRRMGIELFHHGEASVRLNALSMEPEL*A 711
            GKANVV DALSRK+  +      + K L +++  + + L  +G  +V    L   P L  
Sbjct: 874  GKANVVADALSRKSYCNALCTEGMCKELQQELEHLNLGLVEYGYVAV----LEARPTLVD 929

Query: 712  DLRLKQRQDPKLEAIRKAKVNGEAFDFHIEADDSLKFRGRWCVPNDVELKRHILDEAHST 891
             +R  Q  DP++  ++K    G+A DFH +   ++ F  R CVP+D ELK  IL EAH T
Sbjct: 930  QVRAAQVNDPEIAELKKNMRVGKAQDFHEDEHGTIWFGERLCVPDDKELKDLILTEAHQT 989

Query: 892  PYSVHPG 912
             YS+HPG
Sbjct: 990  QYSIHPG 996


>gb|ADB85337.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1053

 Score =  252 bits (643), Expect = 2e-64
 Identities = 139/303 (45%), Positives = 196/303 (64%), Gaps = 3/303 (0%)
 Frame = +1

Query: 13   SVAEIRTFLGLDGYYRRFLKDFSRIARPLTQLLRKNNKF*WSVQC*EAFQELKKRLTSAP 192
            SV E+R+FLGL GYYRRF++ FS+IARP+TQLL+K  KF W+  C ++ QELKKRL SAP
Sbjct: 350  SVTEVRSFLGLAGYYRRFIEGFSKIARPMTQLLKKEKKFEWTEACEKSLQELKKRLVSAP 409

Query: 193  VLTQPTEGVEFDVYSDASKNGLGCVLMQQGKVIVYASRQLKVHEQNYPTHDLELAAVVFA 372
            VL  P    +F+++ DAS+ GLGCVLMQ+GKV+ YASRQL+ HE NYPTHDLELAA+V A
Sbjct: 410  VLILPDIHKDFEIFCDASRQGLGCVLMQEGKVVAYASRQLRPHEGNYPTHDLELAAIVHA 469

Query: 373  LKIWRHYLLW--CYL*VLHRPQEPEIHLYTE-KVEPEAEKVVGVDE*L*YEFELS*GKAN 543
            LKIWRHYL+   C +   H+  +   +++T+ ++     + + + +          GKAN
Sbjct: 470  LKIWRHYLIGNRCEIFTDHKSLK---YIFTQSELNLRQRRWLELIKDYDLGIHYHPGKAN 526

Query: 544  VVVDALSRKTKHSLSSAMVLSK*LCEDIRRMGIELFHHGEASVRLNALSMEPEL*ADLRL 723
            VV DALSRK   +          L E+++ + +E+ + G     +NAL ++P L + +R 
Sbjct: 527  VVADALSRKAYCNTILVQKNQPELYEELKHLNLEIVNQG----CVNALEVQPTLQSQIRE 582

Query: 724  KQRQDPKLEAIRKAKVNGEAFDFHIEADDSLKFRGRWCVPNDVELKRHILDEAHSTPYSV 903
            KQ +D  ++ I+K    G+A  F  +   ++ F  R CVPN  ELK+ IL EAH +PYS+
Sbjct: 583  KQLEDEDIKEIKKNMRRGKAPGFSEDEQGTVWFGNRICVPNQQELKQSILKEAHESPYSI 642

Query: 904  HPG 912
            HPG
Sbjct: 643  HPG 645


>gb|AAN04919.1| Putative polyprotein [Oryza sativa Japonica Group]
            gi|31430212|gb|AAP52158.1| retrotransposon protein,
            putative, Ty3-gypsy subclass, expressed [Oryza sativa
            Japonica Group]
          Length = 1719

 Score =  247 bits (630), Expect = 5e-63
 Identities = 145/311 (46%), Positives = 199/311 (63%), Gaps = 11/311 (3%)
 Frame = +1

Query: 13   SVAEIRTFLGLDGYYRRFLKDFSRIARPLTQLLRKNNKF*WSVQC*EAFQELKKRLTSAP 192
            +V++IR+FLGL GYYRRF+ +FSRIARP+TQLL+K+ KF W+ +C ++F+ELKK+L SAP
Sbjct: 1057 TVSQIRSFLGLAGYYRRFIGNFSRIARPMTQLLKKDEKFKWTAECDKSFEELKKKLVSAP 1116

Query: 193  VLTQPTEGVEFDVYSDASKNGLGCVLMQQGKVIVYASRQLKVHEQNYPTHDLELAAVVFA 372
            VL  P +  +F VY DAS++GLGCVLMQ+G+V+ YASRQL+ HE NYPTHDLELAAVV A
Sbjct: 1117 VLILPDQMKDFQVYCDASRHGLGCVLMQEGRVVAYASRQLRPHEGNYPTHDLELAAVVHA 1176

Query: 373  LKIWRHYLLW--CYL*VLHRP-----QEPEIHLYTEKVEPEAEKVVGVDE*L*YEFELS* 531
            LKIWRHYL+   C +   H+       +P+++    +     E +   D  + Y      
Sbjct: 1177 LKIWRHYLIGNRCEVYTDHKSLKYIFTQPDLNFRQRR---WLELIKDYDMSIHYH----P 1229

Query: 532  GKANVVVDALSRKTKHSLSSAMVLSK*LCEDIRR----MGIELFHHGEASVRLNALSMEP 699
            GKANVV DALSRK   S  +A+ +   +CE++R+    + I +  HG  +    AL   P
Sbjct: 1230 GKANVVADALSRK---SYCTALCIES-MCEELRQEFEHLNIGIVEHGFVA----ALEARP 1281

Query: 700  EL*ADLRLKQRQDPKLEAIRKAKVNGEAFDFHIEADDSLKFRGRWCVPNDVELKRHILDE 879
             L   +R  Q  DP++  ++K    G+A DF  +   ++    R CVP+D ELK  IL E
Sbjct: 1282 TLVDQVRAAQVNDPEIAELKKNMRVGKARDFLKDEHGTIWMGERLCVPDDKELKDLILTE 1341

Query: 880  AHSTPYSVHPG 912
            AH T YS+HPG
Sbjct: 1342 AHQTQYSIHPG 1352


>gb|AAL69439.1|AC098565_21 Putative polyprotein [Oryza sativa]
          Length = 1181

 Score =  247 bits (630), Expect = 5e-63
 Identities = 145/311 (46%), Positives = 199/311 (63%), Gaps = 11/311 (3%)
 Frame = +1

Query: 13   SVAEIRTFLGLDGYYRRFLKDFSRIARPLTQLLRKNNKF*WSVQC*EAFQELKKRLTSAP 192
            +V++IR+FLGL GYYRRF+ +FSRIARP+TQLL+K+ KF W+ +C ++F+ELKK+L SAP
Sbjct: 810  TVSQIRSFLGLAGYYRRFIGNFSRIARPMTQLLKKDEKFKWTAECDKSFEELKKKLVSAP 869

Query: 193  VLTQPTEGVEFDVYSDASKNGLGCVLMQQGKVIVYASRQLKVHEQNYPTHDLELAAVVFA 372
            VL  P +  +F VY DAS++GLGCVLMQ+G+V+ YASRQL+ HE NYPTHDLELAAVV A
Sbjct: 870  VLILPDQMKDFQVYCDASRHGLGCVLMQEGRVVAYASRQLRPHEGNYPTHDLELAAVVHA 929

Query: 373  LKIWRHYLLW--CYL*VLHRP-----QEPEIHLYTEKVEPEAEKVVGVDE*L*YEFELS* 531
            LKIWRHYL+   C +   H+       +P+++    +     E +   D  + Y      
Sbjct: 930  LKIWRHYLIGNRCEVYTDHKSLKYIFTQPDLNFRQRR---WLELIKDYDMSIHYH----P 982

Query: 532  GKANVVVDALSRKTKHSLSSAMVLSK*LCEDIRR----MGIELFHHGEASVRLNALSMEP 699
            GKANVV DALSRK   S  +A+ +   +CE++R+    + I +  HG  +    AL   P
Sbjct: 983  GKANVVADALSRK---SYCTALCIES-MCEELRQEFEHLNIGIVEHGFVA----ALEARP 1034

Query: 700  EL*ADLRLKQRQDPKLEAIRKAKVNGEAFDFHIEADDSLKFRGRWCVPNDVELKRHILDE 879
             L   +R  Q  DP++  ++K    G+A DF  +   ++    R CVP+D ELK  IL E
Sbjct: 1035 TLVDQVRAAQVNDPEIAELKKNMRVGKARDFLKDEHGTIWMGERLCVPDDKELKDLILTE 1094

Query: 880  AHSTPYSVHPG 912
            AH T YS+HPG
Sbjct: 1095 AHQTQYSIHPG 1105


>gb|ABF96568.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1548

 Score =  244 bits (624), Expect = 3e-62
 Identities = 140/307 (45%), Positives = 193/307 (62%), Gaps = 7/307 (2%)
 Frame = +1

Query: 13   SVAEIRTFLGLDGYYRRFLKDFSRIARPLTQLLRKNNKF*WSVQC*EAFQELKKRLTSAP 192
            +V ++R+FLGL GYYRRF+++FS+IA+P+TQLL+K  KF WSV+C  +F+ELK+RL SAP
Sbjct: 837  TVTQVRSFLGLAGYYRRFIENFSKIAKPMTQLLKKEEKFIWSVECNRSFEELKRRLVSAP 896

Query: 193  VLTQPTEGVEFDVYSDASKNGLGCVLMQQGKVIVYASRQLKVHEQNYPTHDLELAAVVFA 372
            VL  P +  +F VY DAS+ GLGCVLMQ GKV+ YASRQL+ HE NYPTHDLELAAVV A
Sbjct: 897  VLILPDQTKDFQVYCDASRQGLGCVLMQDGKVVSYASRQLRPHEGNYPTHDLELAAVVHA 956

Query: 373  LKIWRHYLL--WCYL*VLHRPQEPEIHLYTE-----KVEPEAEKVVGVDE*L*YEFELS* 531
            LKIWRHYL+   C +   H+  +   +++T+     +     E +   D  + Y      
Sbjct: 957  LKIWRHYLISNRCEVYTDHKSLK---YIFTQADLNLRQRRWLELIKDYDMGIHYH----P 1009

Query: 532  GKANVVVDALSRKTKHSLSSAMVLSK*LCEDIRRMGIELFHHGEASVRLNALSMEPEL*A 711
            GKANVV DALSRK+  +++    L   +  D+  + + +  HG  +    AL  +P L  
Sbjct: 1010 GKANVVADALSRKSYCNVAWVEQLCCEVQRDLEHLNLGIVEHGFVA----ALEAQPTLVE 1065

Query: 712  DLRLKQRQDPKLEAIRKAKVNGEAFDFHIEADDSLKFRGRWCVPNDVELKRHILDEAHST 891
             +R+ Q  DP++  ++K    GEA  F  +   ++    R CVP + ELK  IL EAH T
Sbjct: 1066 QVRIAQASDPEIAELKKNMRVGEARGFVEDEQGTIWMGERLCVPENKELKDLILTEAHQT 1125

Query: 892  PYSVHPG 912
             YS+HPG
Sbjct: 1126 QYSIHPG 1132


>gb|AAS90689.2| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1708

 Score =  244 bits (622), Expect = 4e-62
 Identities = 139/307 (45%), Positives = 197/307 (64%), Gaps = 7/307 (2%)
 Frame = +1

Query: 13   SVAEIRTFLGLDGYYRRFLKDFSRIARPLTQLLRKNNKF*WSVQC*EAFQELKKRLTSAP 192
            +V++I++FLGL GYYRRF+++FSRIARP+TQLL+K+ KF W+ +C ++F+ELKK+L SAP
Sbjct: 997  TVSQIQSFLGLAGYYRRFIENFSRIARPMTQLLKKDEKFKWTAECDKSFEELKKKLVSAP 1056

Query: 193  VLTQPTEGVEFDVYSDASKNGLGCVLMQQGKVIVYASRQLKVHEQNYPTHDLELAAVVFA 372
            VL  P +  +F VY DAS++GLGCVLMQ+G+V+ YASRQL+ HE NYPTHDLELAAVV A
Sbjct: 1057 VLILPDQMKDFQVYCDASRHGLGCVLMQEGRVVAYASRQLRPHEGNYPTHDLELAAVVHA 1116

Query: 373  LKIWRHYLLW--CYL*VLHRP-----QEPEIHLYTEKVEPEAEKVVGVDE*L*YEFELS* 531
            LKIWRHYL+   C +   H+       +P+++L   +     E +   +  + Y      
Sbjct: 1117 LKIWRHYLIGNRCEVYTDHKNLKYIFTQPDLNLRQRR---WLELIKDYNMSIHYH----P 1169

Query: 532  GKANVVVDALSRKTKHSLSSAMVLSK*LCEDIRRMGIELFHHGEASVRLNALSMEPEL*A 711
            GKANVV DALSRK+  +      + + L +D   + + +  +G  +    AL   P L  
Sbjct: 1170 GKANVVADALSRKSHCTALCIEGMCEELRQDFEHLNMGIVEYGFVA----ALEARPTLVD 1225

Query: 712  DLRLKQRQDPKLEAIRKAKVNGEAFDFHIEADDSLKFRGRWCVPNDVELKRHILDEAHST 891
             +R+ Q  D ++  ++K    G+A DFH +   ++    R CVP+D ELK  IL EAH T
Sbjct: 1226 KVRVAQVNDSEIAELKKNMRVGKARDFHEDEHGTIWLGERLCVPDDKELKDLILTEAHQT 1285

Query: 892  PYSVHPG 912
             YS+HPG
Sbjct: 1286 QYSIHPG 1292


>gb|AAM74399.1|AC119149_14 Putative retroelement [Oryza sativa Japonica Group]
            gi|31431043|gb|AAP52881.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 1821

 Score =  243 bits (619), Expect = 1e-61
 Identities = 141/307 (45%), Positives = 190/307 (61%), Gaps = 7/307 (2%)
 Frame = +1

Query: 13   SVAEIRTFLGLDGYYRRFLKDFSRIARPLTQLLRKNNKF*WSVQC*EAFQELKKRLTSAP 192
            +V +IR+FLGL GYYRRF+++FS+IARP+TQLL+K  KF WS QC +AFQ LK++L S+P
Sbjct: 1110 TVTQIRSFLGLAGYYRRFIENFSKIARPMTQLLKKEEKFVWSPQCEKAFQTLKEKLVSSP 1169

Query: 193  VLTQPTEGVEFDVYSDASKNGLGCVLMQQGKVIVYASRQLKVHEQNYPTHDLELAAVVFA 372
            VL  P    +F VY DAS+ GLGCVLMQ G V+ YASRQL+ HE NYPTHDLELAAVV A
Sbjct: 1170 VLILPDTRKDFMVYCDASRQGLGCVLMQDGHVVAYASRQLRPHEGNYPTHDLELAAVVHA 1229

Query: 373  LKIWRHYLLW--CYL*VLHRPQEPEIHLYTE-----KVEPEAEKVVGVDE*L*YEFELS* 531
            LKIWRHYL+   C +   H+  +   +++T+     +     E +   D  + Y      
Sbjct: 1230 LKIWRHYLIGNRCEIYTDHKSLK---YIFTQSDLNLRQRRWLELIKDYDVGIHYH----P 1282

Query: 532  GKANVVVDALSRKTKHSLSSAMVLSK*LCEDIRRMGIELFHHGEASVRLNALSMEPEL*A 711
            GKANVV DALSRK+  +  +   +   L + +  + + +  HG     L AL  +P L  
Sbjct: 1283 GKANVVADALSRKSHCNTLNVRGIPPELSQQMEALNLSIVGHGV----LAALEAKPTLLD 1338

Query: 712  DLRLKQRQDPKLEAIRKAKVNGEAFDFHIEADDSLKFRGRWCVPNDVELKRHILDEAHST 891
             +R  Q+ DP +  + K    G+A  F  +   +L    R CVP+D ELK+ IL EAH +
Sbjct: 1339 QIREAQKNDPDMHGLLKNMKQGKAAGFTEDEHGTLWNGNRVCVPDDRELKQLILQEAHES 1398

Query: 892  PYSVHPG 912
            PYS+HPG
Sbjct: 1399 PYSIHPG 1405


>gb|ABA97776.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1406

 Score =  241 bits (616), Expect = 2e-61
 Identities = 138/307 (44%), Positives = 192/307 (62%), Gaps = 7/307 (2%)
 Frame = +1

Query: 13   SVAEIRTFLGLDGYYRRFLKDFSRIARPLTQLLRKNNKF*WSVQC*EAFQELKKRLTSAP 192
            +V ++R+FLGL GYYRRF+++FS+IA+P+TQLL+K  KF WS +C  +F+ELK+RL SAP
Sbjct: 863  TVTQVRSFLGLAGYYRRFIENFSKIAKPMTQLLKKEEKFIWSAECNRSFEELKRRLVSAP 922

Query: 193  VLTQPTEGVEFDVYSDASKNGLGCVLMQQGKVIVYASRQLKVHEQNYPTHDLELAAVVFA 372
            VL  P +  +F VY DAS+ GLGCVLMQ GKV+ YASRQL+ HE NYPTHDLELAAVV A
Sbjct: 923  VLILPDQTKDFQVYCDASRQGLGCVLMQDGKVVSYASRQLRPHEGNYPTHDLELAAVVHA 982

Query: 373  LKIWRHYLL--WCYL*VLHRPQEPEIHLYTE-----KVEPEAEKVVGVDE*L*YEFELS* 531
            LKIWRHYL+   C +   H+  +   +++T+     +     E +   D  + Y      
Sbjct: 983  LKIWRHYLISNRCEVYTDHKSLK---YIFTQADLNLRQRRWLELIKDYDMGIHYH----P 1035

Query: 532  GKANVVVDALSRKTKHSLSSAMVLSK*LCEDIRRMGIELFHHGEASVRLNALSMEPEL*A 711
            GKANVV DALSRK+  +++    L   +  D+  + + +  HG  +    AL  +P L  
Sbjct: 1036 GKANVVADALSRKSYCNVAWVEQLCCEVQRDLEHLNLGIVEHGFVA----ALEAQPTLVE 1091

Query: 712  DLRLKQRQDPKLEAIRKAKVNGEAFDFHIEADDSLKFRGRWCVPNDVELKRHILDEAHST 891
             +R+ Q  DP++  ++K    G+A  F  +   ++    R CVP + ELK  IL EAH T
Sbjct: 1092 QVRIAQASDPEIAELKKNMRVGKARGFVEDEQGTIWMGERLCVPENKELKDLILTEAHQT 1151

Query: 892  PYSVHPG 912
             YS+HPG
Sbjct: 1152 QYSIHPG 1158


>gb|AAV31295.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1374

 Score =  241 bits (615), Expect = 3e-61
 Identities = 136/300 (45%), Positives = 184/300 (61%)
 Frame = +1

Query: 13   SVAEIRTFLGLDGYYRRFLKDFSRIARPLTQLLRKNNKF*WSVQC*EAFQELKKRLTSAP 192
            +V+EIR+FLGL GYYRRF+++FS+IARP+T+LL+K  K+ W+  C  +FQELKKRL +AP
Sbjct: 774  TVSEIRSFLGLAGYYRRFIENFSKIARPMTRLLQKEVKYKWTEDCERSFQELKKRLVTAP 833

Query: 193  VLTQPTEGVEFDVYSDASKNGLGCVLMQQGKVIVYASRQLKVHEQNYPTHDLELAAVVFA 372
            VL  P     F VY DAS+ GLGCVLMQ+GKV+ YASRQL+ HE NYPTHDLELAAVV A
Sbjct: 834  VLILPDSRKGFQVYCDASRLGLGCVLMQEGKVVAYASRQLRSHENNYPTHDLELAAVVHA 893

Query: 373  LKIWRHYLLWCYL*VLHRPQEPEIHLYTEKVEPEAEKVVGVDE*L*YEFELS*GKANVVV 552
            LKIWRHYL      V    +  +       +     + + + +    E     GKANVV 
Sbjct: 894  LKIWRHYLFGNRTEVYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMEIHYHPGKANVVA 953

Query: 553  DALSRKTKHSLSSAMVLSK*LCEDIRRMGIELFHHGEASVRLNALSMEPEL*ADLRLKQR 732
            DALSRK+  ++S    L + LC++  ++ + +   G  +    AL  +P L   +R  Q 
Sbjct: 954  DALSRKSYCNMSEGRRLPRELCQEFEKLNLGIVSKGFVA----ALEAKPTLFDQVREAQV 1009

Query: 733  QDPKLEAIRKAKVNGEAFDFHIEADDSLKFRGRWCVPNDVELKRHILDEAHSTPYSVHPG 912
             DP ++ I+K    G+A  F  +   ++    R CVP + ELK  I+ EAH T YS+HPG
Sbjct: 1010 NDPDIQEIKKNMRRGKAIGFVEDEQGTVWLGERICVPENKELKDTIMKEAHETLYSIHPG 1069


>gb|AAT85240.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1472

 Score =  241 bits (615), Expect = 3e-61
 Identities = 136/300 (45%), Positives = 184/300 (61%)
 Frame = +1

Query: 13   SVAEIRTFLGLDGYYRRFLKDFSRIARPLTQLLRKNNKF*WSVQC*EAFQELKKRLTSAP 192
            +V+EIR+FLGL GYYRRF+++FS+IARP+T+LL+K  K+ W+  C  +FQELKKRL +AP
Sbjct: 774  TVSEIRSFLGLAGYYRRFIENFSKIARPMTRLLQKEVKYKWTEDCERSFQELKKRLVTAP 833

Query: 193  VLTQPTEGVEFDVYSDASKNGLGCVLMQQGKVIVYASRQLKVHEQNYPTHDLELAAVVFA 372
            VL  P     F VY DAS+ GLGCVLMQ+GKV+ YASRQL+ HE NYPTHDLELAAVV A
Sbjct: 834  VLILPDSRKGFQVYCDASRLGLGCVLMQEGKVVAYASRQLRSHENNYPTHDLELAAVVHA 893

Query: 373  LKIWRHYLLWCYL*VLHRPQEPEIHLYTEKVEPEAEKVVGVDE*L*YEFELS*GKANVVV 552
            LKIWRHYL      V    +  +       +     + + + +    E     GKANVV 
Sbjct: 894  LKIWRHYLFGNRTEVYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMEIHYHPGKANVVA 953

Query: 553  DALSRKTKHSLSSAMVLSK*LCEDIRRMGIELFHHGEASVRLNALSMEPEL*ADLRLKQR 732
            DALSRK+  ++S    L + LC++  ++ + +   G  +    AL  +P L   +R  Q 
Sbjct: 954  DALSRKSYCNMSEGRRLPRELCQEFEKLNLGIVSKGFVA----ALEAKPTLFDQVREAQV 1009

Query: 733  QDPKLEAIRKAKVNGEAFDFHIEADDSLKFRGRWCVPNDVELKRHILDEAHSTPYSVHPG 912
             DP ++ I+K    G+A  F  +   ++    R CVP + ELK  I+ EAH T YS+HPG
Sbjct: 1010 NDPDIQEIKKNMRRGKAIGFVEDEQGTVWLGERICVPENKELKDTIMKEAHETLYSIHPG 1069


>gb|AAT81665.1| putative retrotransposon protein [Oryza sativa Japonica Group]
            gi|108709836|gb|ABF97631.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 2784

 Score =  241 bits (614), Expect = 4e-61
 Identities = 141/307 (45%), Positives = 191/307 (62%), Gaps = 7/307 (2%)
 Frame = +1

Query: 13   SVAEIRTFLGLDGYYRRFLKDFSRIARPLTQLLRKNNKF*WSVQC*EAFQELKKRLTSAP 192
            +V+EIR+FLGL GYYRRF+++FS+IA+P+T+L +K+ K+ WS +C ++FQELK RL SAP
Sbjct: 1750 TVSEIRSFLGLAGYYRRFIENFSKIAKPMTRLFQKDVKYKWSEECEQSFQELKSRLISAP 1809

Query: 193  VLTQPTEGVEFDVYSDASKNGLGCVLMQQGKVIVYASRQLKVHEQNYPTHDLELAAVVFA 372
            +L  P     F VY DASK GLGCVLMQ GKV+ YASRQL+ HE+NYPTHDLELAAVV A
Sbjct: 1810 ILILPDPKKGFQVYCDASKFGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDLELAAVVHA 1869

Query: 373  LKIWRHYLLWCYL*VL--HRP-----QEPEIHLYTEKVEPEAEKVVGVDE*L*YEFELS* 531
            LKIWRHYL      V   H+       +P++++   +     E +   D  + Y      
Sbjct: 1870 LKIWRHYLFGTRTEVYTDHKSLKYIFTQPDLNMRQRR---WLELIKDYDMGIHYHL---- 1922

Query: 532  GKANVVVDALSRKTKHSLSSAMVLSK*LCEDIRRMGIELFHHGEASVRLNALSMEPEL*A 711
            GKANVVVDALSRK   + +    LS  LC++  R+ + +   G  +    AL  +P L  
Sbjct: 1923 GKANVVVDALSRKGYCNATEGRQLSLELCKEFERLNLGIVSRGFVA----ALEAKPTLID 1978

Query: 712  DLRLKQRQDPKLEAIRKAKVNGEAFDFHIEADDSLKFRGRWCVPNDVELKRHILDEAHST 891
             +R  Q  DP ++ I+K    G+A  F  +   ++    R CVP++ +LK  IL EAH T
Sbjct: 1979 QVREAQINDPDIQEIKKNMRRGKAIGFLEDEHGTVWLGERICVPDNKDLKDAILKEAHDT 2038

Query: 892  PYSVHPG 912
             YS+HPG
Sbjct: 2039 LYSIHPG 2045


>gb|AAT81698.1| putative retrotransposon protein, 5'-partial [Oryza sativa Japonica
            Group]
          Length = 1633

 Score =  241 bits (614), Expect = 4e-61
 Identities = 141/307 (45%), Positives = 191/307 (62%), Gaps = 7/307 (2%)
 Frame = +1

Query: 13   SVAEIRTFLGLDGYYRRFLKDFSRIARPLTQLLRKNNKF*WSVQC*EAFQELKKRLTSAP 192
            +V+EIR+FLGL GYYRRF+++FS+IA+P+T+L +K+ K+ WS +C ++FQELK RL SAP
Sbjct: 599  TVSEIRSFLGLAGYYRRFIENFSKIAKPMTRLFQKDVKYKWSEECEQSFQELKSRLISAP 658

Query: 193  VLTQPTEGVEFDVYSDASKNGLGCVLMQQGKVIVYASRQLKVHEQNYPTHDLELAAVVFA 372
            +L  P     F VY DASK GLGCVLMQ GKV+ YASRQL+ HE+NYPTHDLELAAVV A
Sbjct: 659  ILILPDPKKGFQVYCDASKFGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDLELAAVVHA 718

Query: 373  LKIWRHYLLWCYL*VL--HRP-----QEPEIHLYTEKVEPEAEKVVGVDE*L*YEFELS* 531
            LKIWRHYL      V   H+       +P++++   +     E +   D  + Y      
Sbjct: 719  LKIWRHYLFGTRTEVYTDHKSLKYIFTQPDLNMRQRR---WLELIKDYDMGIHYHL---- 771

Query: 532  GKANVVVDALSRKTKHSLSSAMVLSK*LCEDIRRMGIELFHHGEASVRLNALSMEPEL*A 711
            GKANVVVDALSRK   + +    LS  LC++  R+ + +   G  +    AL  +P L  
Sbjct: 772  GKANVVVDALSRKGYCNATEGRQLSLELCKEFERLNLGIVSRGFVA----ALEAKPTLID 827

Query: 712  DLRLKQRQDPKLEAIRKAKVNGEAFDFHIEADDSLKFRGRWCVPNDVELKRHILDEAHST 891
             +R  Q  DP ++ I+K    G+A  F  +   ++    R CVP++ +LK  IL EAH T
Sbjct: 828  QVREAQINDPDIQEIKKNMRRGKAIGFLEDEHGTVWLGERICVPDNKDLKDAILKEAHDT 887

Query: 892  PYSVHPG 912
             YS+HPG
Sbjct: 888  LYSIHPG 894


>gb|AAQ56379.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1689

 Score =  241 bits (614), Expect = 4e-61
 Identities = 140/307 (45%), Positives = 189/307 (61%), Gaps = 7/307 (2%)
 Frame = +1

Query: 13   SVAEIRTFLGLDGYYRRFLKDFSRIARPLTQLLRKNNKF*WSVQC*EAFQELKKRLTSAP 192
            +V ++R+FLGL GYYRRF+++FS+IARP+TQLL+K  KF WS QC +AFQ LK++L S+P
Sbjct: 1018 TVTQVRSFLGLAGYYRRFIENFSKIARPMTQLLKKEEKFVWSPQCEKAFQTLKEKLVSSP 1077

Query: 193  VLTQPTEGVEFDVYSDASKNGLGCVLMQQGKVIVYASRQLKVHEQNYPTHDLELAAVVFA 372
            VL  P    +F VY DAS+ GLGCVLMQ+G V+ YASRQL+ HE NYPTHDLELAAVV A
Sbjct: 1078 VLIIPDTRKDFLVYCDASRQGLGCVLMQEGHVVAYASRQLRPHEGNYPTHDLELAAVVHA 1137

Query: 373  LKIWRHYLLW--CYL*VLHRPQEPEIHLYTE-----KVEPEAEKVVGVDE*L*YEFELS* 531
            LKIWRHYL+   C +   H+  +   +++T+     +     E +   D  + Y      
Sbjct: 1138 LKIWRHYLIGNRCEIYTDHKSLK---YIFTQSDLNLRQRRWLELIKDYDVGIHYH----P 1190

Query: 532  GKANVVVDALSRKTKHSLSSAMVLSK*LCEDIRRMGIELFHHGEASVRLNALSMEPEL*A 711
            GKANVV DALSRK++ +      +   L + +  + + +  HG     L  L  +P L  
Sbjct: 1191 GKANVVTDALSRKSRCNTLGVRGIPPELNQQLEALNLSIVSHG----FLATLEAKPILLD 1246

Query: 712  DLRLKQRQDPKLEAIRKAKVNGEAFDFHIEADDSLKFRGRWCVPNDVELKRHILDEAHST 891
             +   Q+ DP +  I K    G+A  F  +   +L    R CVPND ELK+ IL EAH +
Sbjct: 1247 QIHEAQKNDPDMHGILKNMKQGKAAFFTEDEHGTLWNGNRVCVPNDKELKQLILQEAHES 1306

Query: 892  PYSVHPG 912
            PYS+HPG
Sbjct: 1307 PYSIHPG 1313


>gb|ABG66286.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1759

 Score =  240 bits (612), Expect = 6e-61
 Identities = 133/303 (43%), Positives = 195/303 (64%), Gaps = 3/303 (0%)
 Frame = +1

Query: 13   SVAEIRTFLGLDGYYRRFLKDFSRIARPLTQLLRKNNKF*WSVQC*EAFQELKKRLTSAP 192
            +V+EIR+FLGL GYYRRF++ FS++ARP+T+LL+K  KF WS  C ++FQE+KKRLT+AP
Sbjct: 1059 NVSEIRSFLGLAGYYRRFIEGFSKLARPMTELLKKEKKFQWSTACEDSFQEMKKRLTTAP 1118

Query: 193  VLTQPTEGVEFDVYSDASKNGLGCVLMQQGKVIVYASRQLKVHEQNYPTHDLELAAVVFA 372
            VLT P    +F+++ DAS+ GLGCVLMQ+ KV+ YASRQL+ HE NYPTHDLELAAVV A
Sbjct: 1119 VLTLPDIRKDFEIFCDASRQGLGCVLMQERKVVAYASRQLRPHEVNYPTHDLELAAVVHA 1178

Query: 373  LKIWRHYLLW--CYL*VLHRPQEPEIHLYTE-KVEPEAEKVVGVDE*L*YEFELS*GKAN 543
            LKIWRHYL+   C +   H+  +   +++T+ ++     + + + +          GKAN
Sbjct: 1179 LKIWRHYLIGNRCEVYTDHKSLK---YIFTQTELNMRQRRWLELIKDYDLGIHYHPGKAN 1235

Query: 544  VVVDALSRKTKHSLSSAMVLSK*LCEDIRRMGIELFHHGEASVRLNALSMEPEL*ADLRL 723
            VV DALSRKT  ++         LC D+ ++ + +   G A+    +L+++P L + +R 
Sbjct: 1236 VVADALSRKTYCNVDQIRPDQDRLCRDLEKLRLTVVQSGVAA----SLTVQPTLESQIRK 1291

Query: 724  KQRQDPKLEAIRKAKVNGEAFDFHIEADDSLKFRGRWCVPNDVELKRHILDEAHSTPYSV 903
             Q+ D  ++ + K     +  DF I+   ++ +  R CVP   EL+  IL EAH + YS+
Sbjct: 1292 AQKDDEGIKELIKRIQEKKDTDFSIDDQGTVWYGPRICVPAKKELRDLILKEAHESAYSI 1351

Query: 904  HPG 912
            HPG
Sbjct: 1352 HPG 1354


>dbj|BAH79971.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 1477

 Score =  239 bits (611), Expect = 8e-61
 Identities = 140/307 (45%), Positives = 191/307 (62%), Gaps = 7/307 (2%)
 Frame = +1

Query: 13   SVAEIRTFLGLDGYYRRFLKDFSRIARPLTQLLRKNNKF*WSVQC*EAFQELKKRLTSAP 192
            +V+EIR+FLGL GYYRRF+++FS+IA+P+T+LL+K+ K+ WS +C ++FQELK RL SAP
Sbjct: 766  TVSEIRSFLGLAGYYRRFIENFSKIAKPMTRLLQKDVKYKWSQECEQSFQELKSRLVSAP 825

Query: 193  VLTQPTEGVEFDVYSDASKNGLGCVLMQQGKVIVYASRQLKVHEQNYPTHDLELAAVVFA 372
            +L  P     F VY DASK GLGCVLMQ GKV+ YASRQL+ HE+NYPTHDLELAAVV A
Sbjct: 826  ILILPDPKKGFQVYCDASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDLELAAVVHA 885

Query: 373  LKIWRHYLLWCYL*VL--HRP-----QEPEIHLYTEKVEPEAEKVVGVDE*L*YEFELS* 531
            LKIWRHYL      V   H+       +P++++   +     E +   D  + Y      
Sbjct: 886  LKIWRHYLFGTRTEVYTDHKSLKYIFTQPDLNMRQRR---WLELIKDYDMGIHYH----P 938

Query: 532  GKANVVVDALSRKTKHSLSSAMVLSK*LCEDIRRMGIELFHHGEASVRLNALSMEPEL*A 711
            GKANVV DALSRK   +++    L   LC++  R+ + +   G  +    AL  +P L  
Sbjct: 939  GKANVVADALSRKGYCNVTEGRQLPMELCKEFERLNLGIISRGFVA----ALEAKPTLID 994

Query: 712  DLRLKQRQDPKLEAIRKAKVNGEAFDFHIEADDSLKFRGRWCVPNDVELKRHILDEAHST 891
             +R  Q  DP ++ I+K    G+A  F  +   ++    R CVP++ +LK  IL EAH T
Sbjct: 995  QVREAQINDPDIQEIKKNMRRGKAIGFLEDEQGTVWLGERICVPDNKDLKDAILKEAHDT 1054

Query: 892  PYSVHPG 912
             YS+HPG
Sbjct: 1055 LYSIHPG 1061


>gb|ABA98194.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1375

 Score =  239 bits (609), Expect = 1e-60
 Identities = 140/307 (45%), Positives = 191/307 (62%), Gaps = 7/307 (2%)
 Frame = +1

Query: 13   SVAEIRTFLGLDGYYRRFLKDFSRIARPLTQLLRKNNKF*WSVQC*EAFQELKKRLTSAP 192
            +V+EIR+FLGL GYYRRF+++FS+IA+P+T+LL+K+ K+ WS +C ++FQELK RL SAP
Sbjct: 664  TVSEIRSFLGLAGYYRRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSFQELKNRLVSAP 723

Query: 193  VLTQPTEGVEFDVYSDASKNGLGCVLMQQGKVIVYASRQLKVHEQNYPTHDLELAAVVFA 372
            +LT P     F VY DASK GLGCVLMQ GKV+ YASRQL+ HE+NYPTHD+ELAAVV A
Sbjct: 724  ILTLPDPKKGFQVYCDASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDIELAAVVHA 783

Query: 373  LKIWRHYLLWCYL*VL--HRP-----QEPEIHLYTEKVEPEAEKVVGVDE*L*YEFELS* 531
            LKIWRHYL      V   H+       +P++++   +     E +   D  + Y      
Sbjct: 784  LKIWRHYLFGTRTEVYTDHKSLKYIFTQPDLNMRQRR---WLELIKDYDMGIHYH----P 836

Query: 532  GKANVVVDALSRKTKHSLSSAMVLSK*LCEDIRRMGIELFHHGEASVRLNALSMEPEL*A 711
            GKANVV DALSRK   + +    L   LC++  R+ + +   G  +    AL  +P L  
Sbjct: 837  GKANVVADALSRKGYCNATEGRQLPLELCKEFERLNLGIVGRGFVA----ALEAKPTLID 892

Query: 712  DLRLKQRQDPKLEAIRKAKVNGEAFDFHIEADDSLKFRGRWCVPNDVELKRHILDEAHST 891
             +R  Q  DP ++ I+K    G+A  F  +   ++    R CVP++ +LK  IL EAH T
Sbjct: 893  QVREAQINDPDIQEIKKNMRRGKAIGFLEDEHGTVWLGERICVPDNKDLKDAILKEAHDT 952

Query: 892  PYSVHPG 912
             YS+HPG
Sbjct: 953  LYSIHPG 959


>gb|AAM01156.1|AC113336_8 Putative retroelement [Oryza sativa Japonica Group]
            gi|31430462|gb|AAP52371.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 1784

 Score =  239 bits (609), Expect = 1e-60
 Identities = 140/307 (45%), Positives = 189/307 (61%), Gaps = 7/307 (2%)
 Frame = +1

Query: 13   SVAEIRTFLGLDGYYRRFLKDFSRIARPLTQLLRKNNKF*WSVQC*EAFQELKKRLTSAP 192
            +V ++R+FLGL GYYRRF+++FS+IARP+TQLL+K  KF WS QC +AFQ LK++L S+P
Sbjct: 1073 TVTQVRSFLGLAGYYRRFIENFSKIARPMTQLLKKEEKFVWSPQCEKAFQTLKEKLVSSP 1132

Query: 193  VLTQPTEGVEFDVYSDASKNGLGCVLMQQGKVIVYASRQLKVHEQNYPTHDLELAAVVFA 372
            VL  P    +F VY DAS+ GLGCVLMQ G V+ YASRQL+ HE NYPTHDLELAAVV A
Sbjct: 1133 VLILPDTRKDFMVYCDASRQGLGCVLMQDGHVVAYASRQLRPHEGNYPTHDLELAAVVHA 1192

Query: 373  LKIWRHYLLW--CYL*VLHRPQEPEIHLYTE-----KVEPEAEKVVGVDE*L*YEFELS* 531
            LKIWRHYL+   C +   H+  +   +++T+     +     E +   D  + Y      
Sbjct: 1193 LKIWRHYLIGNRCEIYTDHKSLK---YIFTQSDLNLRQRRWLELIKDYDVGIHYH----P 1245

Query: 532  GKANVVVDALSRKTKHSLSSAMVLSK*LCEDIRRMGIELFHHGEASVRLNALSMEPEL*A 711
            GKANVV DALSRK+  +  +A  +   L + +  + + +   G     L AL  +P L  
Sbjct: 1246 GKANVVADALSRKSHCNTLNARDIPPELNQQMEALNLSIVGRG----FLAALEAKPTLLD 1301

Query: 712  DLRLKQRQDPKLEAIRKAKVNGEAFDFHIEADDSLKFRGRWCVPNDVELKRHILDEAHST 891
             +R  Q+ DP +  + K    G+A  F  +   +L    R CVP D ELK+ IL EAH +
Sbjct: 1302 QIREAQKNDPDMHGLLKNMKQGKAAGFTEDEHGTLWNGNRVCVPADKELKQLILQEAHES 1361

Query: 892  PYSVHPG 912
            PYS+HPG
Sbjct: 1362 PYSIHPG 1368


>gb|ABA98185.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1699

 Score =  238 bits (608), Expect = 2e-60
 Identities = 140/307 (45%), Positives = 190/307 (61%), Gaps = 7/307 (2%)
 Frame = +1

Query: 13   SVAEIRTFLGLDGYYRRFLKDFSRIARPLTQLLRKNNKF*WSVQC*EAFQELKKRLTSAP 192
            +V+EIR+FLGL GYYRRF+++FS+IA+P+T+LL+K+ K+ WS +C ++FQELK RL SAP
Sbjct: 988  TVSEIRSFLGLAGYYRRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSFQELKNRLISAP 1047

Query: 193  VLTQPTEGVEFDVYSDASKNGLGCVLMQQGKVIVYASRQLKVHEQNYPTHDLELAAVVFA 372
            +L  P     F VY DASK GLGCVLMQ GKV+ YASRQL+ HE+NYPTHDLELAAVV A
Sbjct: 1048 ILILPDPKKGFQVYCDASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDLELAAVVHA 1107

Query: 373  LKIWRHYLLWCYL*VL--HRP-----QEPEIHLYTEKVEPEAEKVVGVDE*L*YEFELS* 531
            LKIWRHYL      V   H+       +P++++   +     E +   D  + Y      
Sbjct: 1108 LKIWRHYLFGTRTEVYTDHKSLKYIFTQPDLNMRQRR---WLELIKDYDMGIHYH----P 1160

Query: 532  GKANVVVDALSRKTKHSLSSAMVLSK*LCEDIRRMGIELFHHGEASVRLNALSMEPEL*A 711
            GKANVV DALSRK   + +    L   LC++  R+ + +   G  +    AL  +P L  
Sbjct: 1161 GKANVVADALSRKGYCNATEGRQLPLELCKEFERLNLGIVSRGFVA----ALEAKPTLID 1216

Query: 712  DLRLKQRQDPKLEAIRKAKVNGEAFDFHIEADDSLKFRGRWCVPNDVELKRHILDEAHST 891
             +R  Q  DP ++ I+K    G+A  F  +   ++    R CVP++ +LK  IL EAH T
Sbjct: 1217 QVREAQINDPNIQEIKKNMRRGKAIGFMEDEQGTVWLGERICVPDNKDLKDAILKEAHDT 1276

Query: 892  PYSVHPG 912
             YS+HPG
Sbjct: 1277 LYSIHPG 1283