BLASTX nr result

ID: Achyranthes23_contig00020726 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00020726
         (345 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AHB24928.1| chloroplast chlorophyll a-b binding protein 2/3 [...   100   3e-19
gb|AAB61238.1| chlorophyll a/b-binding protein [Mesembryanthemum...   100   3e-19
gb|AHB24929.1| chloroplast light-harvesting complex II chlorophy...    99   4e-19
gb|AAB61236.1| chlorophyll a/b-binding protein [Mesembryanthemum...    99   6e-19
gb|AAB61237.1| chlorophyll a/b-binding protein [Mesembryanthemum...    99   6e-19
ref|XP_006356073.1| PREDICTED: chlorophyll a-b binding protein 3...    99   8e-19
ref|XP_004145734.1| PREDICTED: chlorophyll a-b binding protein, ...    99   8e-19
sp|P04779.1|CB21_PETSP RecName: Full=Chlorophyll a-b binding pro...    98   1e-18
ref|XP_006356074.1| PREDICTED: chlorophyll a-b binding protein 3...    98   1e-18
gb|AAT08651.1| chloroplast chlorophyll A-B binding protein [Hyac...    98   1e-18
ref|XP_006356077.1| PREDICTED: chlorophyll a-b binding protein 3...    98   1e-18
gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding prot...    98   1e-18
sp|P27492.1|CB21_TOBAC RecName: Full=Chlorophyll a-b binding pro...    97   2e-18
dbj|BAA25392.1| light harvesting chlorophyll a/b-binding protein...    97   2e-18
ref|XP_004234241.1| PREDICTED: uncharacterized protein LOC101245...    97   2e-18
ref|XP_004234063.1| PREDICTED: chlorophyll a-b binding protein 3...    97   2e-18
ref|XP_004234062.1| PREDICTED: chlorophyll a-b binding protein 3...    97   2e-18
ref|XP_004234058.1| PREDICTED: chlorophyll a-b binding protein 3...    97   2e-18
sp|P12470.1|CB25_NICPL RecName: Full=Chlorophyll a-b binding pro...    97   2e-18
emb|CAX64458.1| major chlorophyll a/b binding protein LHCb1.4 pr...    97   2e-18

>gb|AHB24928.1| chloroplast chlorophyll a-b binding protein 2/3 [Sedum alfredii]
          Length = 267

 Score =  100 bits (248), Expect = 3e-19
 Identities = 53/87 (60%), Positives = 56/87 (64%)
 Frame = +3

Query: 84  ASMAATSFKGLPTLGAWTASNNNINKSVGRPRMTTVTMRATRGKKQPETPDSPWYGPDRV 263
           AS  A S   L      TAS+ +     GR     VTMR T  K +P    SPWYGPDRV
Sbjct: 3   ASTMALSSLSLAGQAVKTASSASEVFGSGR-----VTMRKTAAKPKPSASSSPWYGPDRV 57

Query: 264 KYLGPFSGEAPSYLTGEFPGDYGWDTA 344
           KYLGPFSGEAPSYLTGEFPGDYGWDTA
Sbjct: 58  KYLGPFSGEAPSYLTGEFPGDYGWDTA 84


>gb|AAB61238.1| chlorophyll a/b-binding protein [Mesembryanthemum crystallinum]
          Length = 267

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 43/52 (82%), Positives = 46/52 (88%)
 Frame = +3

Query: 189 VTMRATRGKKQPETPDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTA 344
           +TMR T GK +  + DSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTA
Sbjct: 33  ITMRKTAGKTKNVSSDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTA 84


>gb|AHB24929.1| chloroplast light-harvesting complex II chlorophyll a/b binding
           protein 1 [Sedum alfredii]
          Length = 267

 Score = 99.4 bits (246), Expect = 4e-19
 Identities = 43/52 (82%), Positives = 44/52 (84%)
 Frame = +3

Query: 189 VTMRATRGKKQPETPDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTA 344
           VTMR T  K +P    SPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTA
Sbjct: 33  VTMRKTAAKSKPTVSSSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTA 84


>gb|AAB61236.1| chlorophyll a/b-binding protein [Mesembryanthemum crystallinum]
          Length = 267

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 50/86 (58%), Positives = 61/86 (70%)
 Frame = +3

Query: 87  SMAATSFKGLPTLGAWTASNNNINKSVGRPRMTTVTMRATRGKKQPETPDSPWYGPDRVK 266
           ++++ SF G     + TAS     +++G  R   +TMR   GK +  T DSPWYGPDRVK
Sbjct: 7   ALSSPSFAGKAVKLSPTAS-----ETLGEGR---ITMRKAAGKSKVATIDSPWYGPDRVK 58

Query: 267 YLGPFSGEAPSYLTGEFPGDYGWDTA 344
           YLGPFSGE+PSYLTGEFPGDYGWDTA
Sbjct: 59  YLGPFSGESPSYLTGEFPGDYGWDTA 84


>gb|AAB61237.1| chlorophyll a/b-binding protein [Mesembryanthemum crystallinum]
          Length = 267

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 42/52 (80%), Positives = 46/52 (88%)
 Frame = +3

Query: 189 VTMRATRGKKQPETPDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTA 344
           +TMR T GK +  + DSPWYGPDRVKYLGPFSGE+PSYLTGEFPGDYGWDTA
Sbjct: 33  ITMRKTAGKTKSVSSDSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTA 84


>ref|XP_006356073.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
           [Solanum tuberosum]
          Length = 267

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 42/52 (80%), Positives = 45/52 (86%)
 Frame = +3

Query: 189 VTMRATRGKKQPETPDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTA 344
           +TMR T  K +P +  SPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTA
Sbjct: 33  ITMRKTAAKAKPASSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTA 84


>ref|XP_004145734.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
           [Cucumis sativus] gi|449525484|ref|XP_004169747.1|
           PREDICTED: chlorophyll a-b binding protein,
           chloroplastic-like [Cucumis sativus]
          Length = 267

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 42/52 (80%), Positives = 45/52 (86%)
 Frame = +3

Query: 189 VTMRATRGKKQPETPDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTA 344
           +TMR T GK +P +  SPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTA
Sbjct: 33  ITMRKTAGKPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTA 84


>sp|P04779.1|CB21_PETSP RecName: Full=Chlorophyll a-b binding protein 13, chloroplastic;
           AltName: Full=LHCII type I CAB-13; Short=LHCP; Flags:
           Precursor gi|20471|emb|CAA26210.1| unnamed protein
           product [Petunia sp.]
          Length = 266

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 46/65 (70%), Positives = 49/65 (75%)
 Frame = +3

Query: 150 NINKSVGRPRMTTVTMRATRGKKQPETPDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDY 329
           N+  S    R   VTMR T  K +P +  SPWYGPDRVKYLGPFSGEAPSYLTGEFPGDY
Sbjct: 19  NVPSSSEITRNGKVTMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDY 78

Query: 330 GWDTA 344
           GWDTA
Sbjct: 79  GWDTA 83


>ref|XP_006356074.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
           [Solanum tuberosum]
          Length = 267

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 43/52 (82%), Positives = 45/52 (86%)
 Frame = +3

Query: 189 VTMRATRGKKQPETPDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTA 344
           VTMR T  K +P +  SPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTA
Sbjct: 33  VTMRKTTTKAKPASSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTA 84


>gb|AAT08651.1| chloroplast chlorophyll A-B binding protein [Hyacinthus orientalis]
          Length = 239

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 51/100 (51%), Positives = 61/100 (61%)
 Frame = +3

Query: 45  STKSKEPKHQNKMASMAATSFKGLPTLGAWTASNNNINKSVGRPRMTTVTMRATRGKKQP 224
           ST + + +    MAS  A S   L         ++++    GR      TMR T GK + 
Sbjct: 1   STNACQTRELLSMASTMALSSPSLAGTAVKLTPSSSVVSGDGR-----FTMRKTAGKPKT 55

Query: 225 ETPDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTA 344
            +  SPWYGP+RVKYLGPFSGEAPSYLTGEFPGDYGWDTA
Sbjct: 56  VSSGSPWYGPERVKYLGPFSGEAPSYLTGEFPGDYGWDTA 95


>ref|XP_006356077.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
           [Solanum tuberosum]
          Length = 267

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 42/52 (80%), Positives = 45/52 (86%)
 Frame = +3

Query: 189 VTMRATRGKKQPETPDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTA 344
           VTMR T  K +P +  SPWYGPDRVKYLGPFSGE+PSYLTGEFPGDYGWDTA
Sbjct: 33  VTMRKTAAKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTA 84


>gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding protein [Carya
           cathayensis]
          Length = 267

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 42/52 (80%), Positives = 45/52 (86%)
 Frame = +3

Query: 189 VTMRATRGKKQPETPDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTA 344
           VTMR T G+ +P +  SPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTA
Sbjct: 33  VTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTA 84


>sp|P27492.1|CB21_TOBAC RecName: Full=Chlorophyll a-b binding protein 16, chloroplastic;
           AltName: Full=LHCII type I CAB-16; Short=LHCP; Flags:
           Precursor gi|19819|emb|CAA36955.1| unnamed protein
           product [Nicotiana tabacum]
          Length = 266

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 42/52 (80%), Positives = 45/52 (86%)
 Frame = +3

Query: 189 VTMRATRGKKQPETPDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTA 344
           VTMR T  K +P +  SPWYGPDRVKYLGPFSGE+PSYLTGEFPGDYGWDTA
Sbjct: 32  VTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTA 83


>dbj|BAA25392.1| light harvesting chlorophyll a/b-binding protein [Nicotiana
           sylvestris]
          Length = 267

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 42/52 (80%), Positives = 45/52 (86%)
 Frame = +3

Query: 189 VTMRATRGKKQPETPDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTA 344
           VTMR T  K +P +  SPWYGPDRVKYLGPFSGE+PSYLTGEFPGDYGWDTA
Sbjct: 33  VTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTA 84


>ref|XP_004234241.1| PREDICTED: uncharacterized protein LOC101245729 [Solanum
           lycopersicum]
          Length = 554

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 41/52 (78%), Positives = 45/52 (86%)
 Frame = +3

Query: 189 VTMRATRGKKQPETPDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTA 344
           +TMR T  K +P +  SPWYGPDRVKYLGPFSGE+PSYLTGEFPGDYGWDTA
Sbjct: 33  ITMRKTAAKPKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTA 84



 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 42/52 (80%), Positives = 45/52 (86%)
 Frame = +3

Query: 189 VTMRATRGKKQPETPDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTA 344
           VTMR T  K +P +  SPWYGPDRVKYLGPFSGE+PSYLTGEFPGDYGWDTA
Sbjct: 320 VTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTA 371


>ref|XP_004234063.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
           isoform 6 [Solanum lycopersicum]
          Length = 244

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 41/52 (78%), Positives = 45/52 (86%)
 Frame = +3

Query: 189 VTMRATRGKKQPETPDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTA 344
           +TMR T  K +P +  SPWYGPDRVKYLGPFSGE+PSYLTGEFPGDYGWDTA
Sbjct: 33  ITMRKTAAKPKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTA 84


>ref|XP_004234062.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
           isoform 5 [Solanum lycopersicum]
          Length = 255

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 41/52 (78%), Positives = 45/52 (86%)
 Frame = +3

Query: 189 VTMRATRGKKQPETPDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTA 344
           +TMR T  K +P +  SPWYGPDRVKYLGPFSGE+PSYLTGEFPGDYGWDTA
Sbjct: 33  ITMRKTAAKPKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTA 84


>ref|XP_004234058.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
           isoform 1 [Solanum lycopersicum]
           gi|460376546|ref|XP_004234059.1| PREDICTED: chlorophyll
           a-b binding protein 3C, chloroplastic-like isoform 2
           [Solanum lycopersicum] gi|460376548|ref|XP_004234060.1|
           PREDICTED: chlorophyll a-b binding protein 3C,
           chloroplastic-like isoform 3 [Solanum lycopersicum]
           gi|460376550|ref|XP_004234061.1| PREDICTED: chlorophyll
           a-b binding protein 3C, chloroplastic-like isoform 4
           [Solanum lycopersicum]
          Length = 267

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 41/52 (78%), Positives = 45/52 (86%)
 Frame = +3

Query: 189 VTMRATRGKKQPETPDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTA 344
           +TMR T  K +P +  SPWYGPDRVKYLGPFSGE+PSYLTGEFPGDYGWDTA
Sbjct: 33  ITMRKTAAKPKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTA 84


>sp|P12470.1|CB25_NICPL RecName: Full=Chlorophyll a-b binding protein E, chloroplastic;
           AltName: Full=LHCII type I CAB-E; Short=LHCP; Flags:
           Precursor gi|170212|gb|AAA34056.1| chlorophyll
           a/b-binding protein-E [Nicotiana plumbaginifolia]
          Length = 266

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 42/52 (80%), Positives = 45/52 (86%)
 Frame = +3

Query: 189 VTMRATRGKKQPETPDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTA 344
           VTMR T  K +P +  SPWYGPDRVKYLGPFSGE+PSYLTGEFPGDYGWDTA
Sbjct: 32  VTMRKTANKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTA 83


>emb|CAX64458.1| major chlorophyll a/b binding protein LHCb1.4 precursor [Spinacia
           oleracea]
          Length = 267

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 43/52 (82%), Positives = 45/52 (86%)
 Frame = +3

Query: 189 VTMRATRGKKQPETPDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTA 344
           VTMR T GK +  +  SPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTA
Sbjct: 33  VTMRKTAGKPKNVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTA 84


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