BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00020361
         (437 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21038.3| unnamed protein product [Vitis vinifera]              218   5e-55
ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [V...   218   5e-55
ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populu...   214   1e-53
ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populu...   207   9e-52
ref|XP_006483358.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   201   6e-50
ref|XP_006483356.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   201   6e-50
gb|EMJ26639.1| hypothetical protein PRUPE_ppa000422mg [Prunus pe...   200   2e-49
ref|XP_004291459.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   199   2e-49
ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Rici...   199   4e-49
gb|EOY29490.1| RNA-dependent RNA polymerase 6 [Theobroma cacao]       197   9e-49
ref|XP_006404133.1| hypothetical protein EUTSA_v10010107mg [Eutr...   195   5e-48
dbj|BAJ34538.1| unnamed protein product [Thellungiella halophila]     195   5e-48
gb|ESW09024.1| hypothetical protein PHAVU_009G093700g [Phaseolus...   194   1e-47
gb|AGU69384.1| RNA-dependendent RNA polymerase 6-like protein [L...   193   2e-47
ref|XP_003522618.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   193   2e-47
ref|XP_003526410.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   192   3e-47
gb|EXB88201.1| RNA-dependent RNA polymerase 6 [Morus notabilis]       192   5e-47
gb|AAF74208.1|AF268093_1 RNA-dependent RNA polymerase [Arabidops...   190   1e-46
ref|NP_190519.1| RNA-dependent RNA polymerase 6 [Arabidopsis tha...   190   1e-46
ref|XP_002877681.1| RNA-dependent RNA polymerase 6 [Arabidopsis ...   190   2e-46

>emb|CBI21038.3| unnamed protein product [Vitis vinifera]
          Length = 1035

 Score =  218 bits (556), Expect = 5e-55
 Identities = 100/141 (70%), Positives = 122/141 (86%)
 Frame = -1

Query: 425 KQLLRVKDEPGFSVHRADPFFCIQHKEGVAFDVTFMLNAAVHKGIINQHELSGRFFDLLR 246
           K  LRV+DEP F +  +DPFFCIQHKEG+ F V F++NA +HKGIINQH+LS +FFDLLR
Sbjct: 140 KWQLRVRDEPDFGLPMSDPFFCIQHKEGIDFRVMFLVNAVMHKGIINQHQLSDKFFDLLR 199

Query: 245 TQSAEVNIAALKHICSYKRPVFDAYRRLKLVQDWLVRNPRLLKTPAKLSDIVEVRRLIIT 66
           +Q  ++NIAALKHICSY+ PVFDAY+RLKLV  WL++NP+LLK+P +L DIVEVRRL+IT
Sbjct: 200 SQQKDINIAALKHICSYRHPVFDAYQRLKLVHKWLLKNPKLLKSPKELDDIVEVRRLVIT 259

Query: 65  PTKAYCLPPEAELSNRVLRHY 3
           P+KAYCLPPE ELSNRVLR+Y
Sbjct: 260 PSKAYCLPPEVELSNRVLRNY 280


>ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [Vitis vinifera]
          Length = 1197

 Score =  218 bits (556), Expect = 5e-55
 Identities = 100/141 (70%), Positives = 122/141 (86%)
 Frame = -1

Query: 425 KQLLRVKDEPGFSVHRADPFFCIQHKEGVAFDVTFMLNAAVHKGIINQHELSGRFFDLLR 246
           K  LRV+DEP F +  +DPFFCIQHKEG+ F V F++NA +HKGIINQH+LS +FFDLLR
Sbjct: 302 KWQLRVRDEPDFGLPMSDPFFCIQHKEGIDFRVMFLVNAVMHKGIINQHQLSDKFFDLLR 361

Query: 245 TQSAEVNIAALKHICSYKRPVFDAYRRLKLVQDWLVRNPRLLKTPAKLSDIVEVRRLIIT 66
           +Q  ++NIAALKHICSY+ PVFDAY+RLKLV  WL++NP+LLK+P +L DIVEVRRL+IT
Sbjct: 362 SQQKDINIAALKHICSYRHPVFDAYQRLKLVHKWLLKNPKLLKSPKELDDIVEVRRLVIT 421

Query: 65  PTKAYCLPPEAELSNRVLRHY 3
           P+KAYCLPPE ELSNRVLR+Y
Sbjct: 422 PSKAYCLPPEVELSNRVLRNY 442


>ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
           gi|222865729|gb|EEF02860.1| SILENCING DEFECTIVE 1 family
           protein [Populus trichocarpa]
          Length = 1200

 Score =  214 bits (544), Expect = 1e-53
 Identities = 95/144 (65%), Positives = 119/144 (82%)
 Frame = -1

Query: 434 ECSKQLLRVKDEPGFSVHRADPFFCIQHKEGVAFDVTFMLNAAVHKGIINQHELSGRFFD 255
           E  ++ +R+ DEP F +  +DPFFCI HKEG+AF+V F++NA +HKGI NQH+LS  FFD
Sbjct: 300 ENHRRRIRILDEPDFGMPMSDPFFCIHHKEGIAFEVLFLVNAVMHKGIFNQHQLSNDFFD 359

Query: 254 LLRTQSAEVNIAALKHICSYKRPVFDAYRRLKLVQDWLVRNPRLLKTPAKLSDIVEVRRL 75
           LLR Q  EVN++ALKHIC+Y+RPVF+AYRRLK VQ+WL++NP L K P +L D+VE+RRL
Sbjct: 360 LLRNQHTEVNVSALKHICTYRRPVFNAYRRLKAVQEWLLKNPNLFKNPKQLGDVVEIRRL 419

Query: 74  IITPTKAYCLPPEAELSNRVLRHY 3
           +ITPTKAYCLPPE ELSNRVLR Y
Sbjct: 420 VITPTKAYCLPPEVELSNRVLRKY 443


>ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
           gi|222854638|gb|EEE92185.1| SILENCING DEFECTIVE 1 family
           protein [Populus trichocarpa]
          Length = 1198

 Score =  207 bits (528), Expect = 9e-52
 Identities = 93/144 (64%), Positives = 115/144 (79%)
 Frame = -1

Query: 434 ECSKQLLRVKDEPGFSVHRADPFFCIQHKEGVAFDVTFMLNAAVHKGIINQHELSGRFFD 255
           E  ++ +R++DEP F +   DPFFCI HKEG+AFDV F++NA +HKGI NQH+LS  FFD
Sbjct: 297 EYLRRPIRIRDEPDFGMPMTDPFFCIHHKEGIAFDVLFLVNAVMHKGIFNQHQLSNDFFD 356

Query: 254 LLRTQSAEVNIAALKHICSYKRPVFDAYRRLKLVQDWLVRNPRLLKTPAKLSDIVEVRRL 75
           LLR Q  EVN+AALKHI  Y+RPVFDAY++LK+ Q+WL++NP+  K   KL DI E+RRL
Sbjct: 357 LLRNQPTEVNVAALKHIYPYRRPVFDAYKKLKVAQEWLLKNPKFFKNQKKLDDIAEIRRL 416

Query: 74  IITPTKAYCLPPEAELSNRVLRHY 3
           +ITPTKAYCLPPE ELSNRVLR Y
Sbjct: 417 VITPTKAYCLPPEVELSNRVLRKY 440


>ref|XP_006483358.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X3 [Citrus
           sinensis]
          Length = 1025

 Score =  201 bits (512), Expect = 6e-50
 Identities = 93/145 (64%), Positives = 119/145 (82%)
 Frame = -1

Query: 437 VECSKQLLRVKDEPGFSVHRADPFFCIQHKEGVAFDVTFMLNAAVHKGIINQHELSGRFF 258
           V+   + + +++EP F V  +DPFFCI ++EG++F++ F++NA +HKGIINQH+LS  FF
Sbjct: 296 VDSLSRPITIREEPDFEVPMSDPFFCIHYEEGISFEIMFLVNAVMHKGIINQHQLSDSFF 355

Query: 257 DLLRTQSAEVNIAALKHICSYKRPVFDAYRRLKLVQDWLVRNPRLLKTPAKLSDIVEVRR 78
           DLLR QS EVN+AALKHI SYK PVFDA +RLKLVQ+WL+++P L K P ++ DIVEVRR
Sbjct: 356 DLLRGQSREVNVAALKHIYSYKWPVFDACKRLKLVQEWLLKDPELYKGPKQIDDIVEVRR 415

Query: 77  LIITPTKAYCLPPEAELSNRVLRHY 3
           L+ITPTKAYCLPPE ELSNRVLR Y
Sbjct: 416 LVITPTKAYCLPPEVELSNRVLRKY 440


>ref|XP_006483356.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Citrus
           sinensis] gi|568859664|ref|XP_006483357.1| PREDICTED:
           RNA-dependent RNA polymerase 6-like isoform X2 [Citrus
           sinensis]
          Length = 1197

 Score =  201 bits (512), Expect = 6e-50
 Identities = 93/145 (64%), Positives = 119/145 (82%)
 Frame = -1

Query: 437 VECSKQLLRVKDEPGFSVHRADPFFCIQHKEGVAFDVTFMLNAAVHKGIINQHELSGRFF 258
           V+   + + +++EP F V  +DPFFCI ++EG++F++ F++NA +HKGIINQH+LS  FF
Sbjct: 296 VDSLSRPITIREEPDFEVPMSDPFFCIHYEEGISFEIMFLVNAVMHKGIINQHQLSDSFF 355

Query: 257 DLLRTQSAEVNIAALKHICSYKRPVFDAYRRLKLVQDWLVRNPRLLKTPAKLSDIVEVRR 78
           DLLR QS EVN+AALKHI SYK PVFDA +RLKLVQ+WL+++P L K P ++ DIVEVRR
Sbjct: 356 DLLRGQSREVNVAALKHIYSYKWPVFDACKRLKLVQEWLLKDPELYKGPKQIDDIVEVRR 415

Query: 77  LIITPTKAYCLPPEAELSNRVLRHY 3
           L+ITPTKAYCLPPE ELSNRVLR Y
Sbjct: 416 LVITPTKAYCLPPEVELSNRVLRKY 440


>gb|EMJ26639.1| hypothetical protein PRUPE_ppa000422mg [Prunus persica]
          Length = 1196

 Score =  200 bits (508), Expect = 2e-49
 Identities = 88/143 (61%), Positives = 116/143 (81%)
 Frame = -1

Query: 431 CSKQLLRVKDEPGFSVHRADPFFCIQHKEGVAFDVTFMLNAAVHKGIINQHELSGRFFDL 252
           C K   +++DEP F +   +PFF IQ++EG++F++ F++NA +HKG +NQH+LS  FF L
Sbjct: 297 CIKWPPKIQDEPDFGMSNTEPFFSIQYEEGISFEIMFLVNAVMHKGTVNQHQLSDSFFHL 356

Query: 251 LRTQSAEVNIAALKHICSYKRPVFDAYRRLKLVQDWLVRNPRLLKTPAKLSDIVEVRRLI 72
           LR+Q  E+N+AALKH+CSY+ PVFDA  RLK+VQDWL++NP+L+K P +L DI EVRRL+
Sbjct: 357 LRSQPKEINVAALKHLCSYRSPVFDACERLKVVQDWLLKNPKLVKDPKRLDDIAEVRRLV 416

Query: 71  ITPTKAYCLPPEAELSNRVLRHY 3
           ITPTKAYCLPPE ELSNRVLR Y
Sbjct: 417 ITPTKAYCLPPEVELSNRVLRKY 439


>ref|XP_004291459.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Fragaria vesca
           subsp. vesca]
          Length = 1197

 Score =  199 bits (507), Expect = 2e-49
 Identities = 89/137 (64%), Positives = 113/137 (82%)
 Frame = -1

Query: 413 RVKDEPGFSVHRADPFFCIQHKEGVAFDVTFMLNAAVHKGIINQHELSGRFFDLLRTQSA 234
           R++DEPGF    +D  F I +++ ++FD+ F++NA +HKGI+NQH+LS  FFDLLR Q  
Sbjct: 304 RIQDEPGFGNPMSDALFSIHYQKNISFDILFLVNAVMHKGILNQHQLSESFFDLLRNQPE 363

Query: 233 EVNIAALKHICSYKRPVFDAYRRLKLVQDWLVRNPRLLKTPAKLSDIVEVRRLIITPTKA 54
           E+N+AALKH+CSYK PVFDA +RLKLVQ+WL+RNP+L+K P +L DI EVRRL+ITPTKA
Sbjct: 364 EINVAALKHLCSYKHPVFDASKRLKLVQEWLLRNPKLIKNPKRLDDIAEVRRLVITPTKA 423

Query: 53  YCLPPEAELSNRVLRHY 3
           YCLPPE ELSNRVLR Y
Sbjct: 424 YCLPPEVELSNRVLRKY 440


>ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
           gi|223545464|gb|EEF46969.1| RNA-dependent RNA
           polymerase, putative [Ricinus communis]
          Length = 1203

 Score =  199 bits (505), Expect = 4e-49
 Identities = 90/144 (62%), Positives = 115/144 (79%)
 Frame = -1

Query: 434 ECSKQLLRVKDEPGFSVHRADPFFCIQHKEGVAFDVTFMLNAAVHKGIINQHELSGRFFD 255
           +C ++ L V  EP + +  +DPFFCI H+EGV F++ F++NA +HKGI NQH+LS  FFD
Sbjct: 297 DCLRRPLHVTAEPEYEMPMSDPFFCIHHEEGVDFNLMFLVNAVMHKGIFNQHQLSDSFFD 356

Query: 254 LLRTQSAEVNIAALKHICSYKRPVFDAYRRLKLVQDWLVRNPRLLKTPAKLSDIVEVRRL 75
           LLR Q  +VNIAAL+HICSYK PVFDA++RLK VQ WL++NP+L ++  +L DIVE+RRL
Sbjct: 357 LLRNQPLDVNIAALRHICSYKHPVFDAHKRLKAVQQWLLKNPKLFRSSKQLDDIVEIRRL 416

Query: 74  IITPTKAYCLPPEAELSNRVLRHY 3
            ITPT+AYCLPPE ELSNRVLR Y
Sbjct: 417 AITPTRAYCLPPEVELSNRVLRRY 440


>gb|EOY29490.1| RNA-dependent RNA polymerase 6 [Theobroma cacao]
          Length = 1197

 Score =  197 bits (502), Expect = 9e-49
 Identities = 91/138 (65%), Positives = 112/138 (81%)
 Frame = -1

Query: 416 LRVKDEPGFSVHRADPFFCIQHKEGVAFDVTFMLNAAVHKGIINQHELSGRFFDLLRTQS 237
           LR+ DEP F    +DPF+CI +KEG+ F++ F++NA +HKGI NQH+LS  FF+LLR Q 
Sbjct: 303 LRISDEPDFGRSMSDPFYCIDYKEGIPFEIMFLVNAVMHKGIFNQHQLSEDFFNLLRDQP 362

Query: 236 AEVNIAALKHICSYKRPVFDAYRRLKLVQDWLVRNPRLLKTPAKLSDIVEVRRLIITPTK 57
            EVN+AALKHI SY+RPVFDAY+RLK V DWL+RNP L K+P +L DIVE+RRL+ITPTK
Sbjct: 363 REVNVAALKHIYSYRRPVFDAYKRLKTVHDWLLRNPILFKSPKQLDDIVEIRRLVITPTK 422

Query: 56  AYCLPPEAELSNRVLRHY 3
           A+CL PE ELSNRVLR Y
Sbjct: 423 AHCLLPEVELSNRVLRKY 440


>ref|XP_006404133.1| hypothetical protein EUTSA_v10010107mg [Eutrema salsugineum]
           gi|557105252|gb|ESQ45586.1| hypothetical protein
           EUTSA_v10010107mg [Eutrema salsugineum]
          Length = 927

 Score =  195 bits (496), Expect = 5e-48
 Identities = 84/137 (61%), Positives = 115/137 (83%)
 Frame = -1

Query: 413 RVKDEPGFSVHRADPFFCIQHKEGVAFDVTFMLNAAVHKGIINQHELSGRFFDLLRTQSA 234
           R++DEPGF    +D FFCI HKEG++F++ F++N+ +H+G++NQ +L+ RFFDLLR Q  
Sbjct: 318 RIRDEPGFGEAVSDHFFCIHHKEGISFEIMFLVNSVLHRGVLNQFQLTERFFDLLRNQPK 377

Query: 233 EVNIAALKHICSYKRPVFDAYRRLKLVQDWLVRNPRLLKTPAKLSDIVEVRRLIITPTKA 54
           +VNIA+LKH+C+Y RPVFDAY+RLKLVQ+W+++NP+LL +  +  DI E+RRL+ITPT+A
Sbjct: 378 DVNIASLKHLCTYNRPVFDAYKRLKLVQEWVLKNPKLLVSHERSDDISEIRRLVITPTRA 437

Query: 53  YCLPPEAELSNRVLRHY 3
           YCLPPE ELSNRVLR Y
Sbjct: 438 YCLPPEVELSNRVLRKY 454


>dbj|BAJ34538.1| unnamed protein product [Thellungiella halophila]
          Length = 998

 Score =  195 bits (496), Expect = 5e-48
 Identities = 84/137 (61%), Positives = 115/137 (83%)
 Frame = -1

Query: 413 RVKDEPGFSVHRADPFFCIQHKEGVAFDVTFMLNAAVHKGIINQHELSGRFFDLLRTQSA 234
           R++DEPGF    +D FFCI HKEG++F++ F++N+ +H+G++NQ +L+ RFFDLLR Q  
Sbjct: 302 RIRDEPGFGEAVSDHFFCIHHKEGISFEIMFLVNSVLHRGVLNQFQLTERFFDLLRNQPK 361

Query: 233 EVNIAALKHICSYKRPVFDAYRRLKLVQDWLVRNPRLLKTPAKLSDIVEVRRLIITPTKA 54
           +VNIA+LKH+C+Y RPVFDAY+RLKLVQ+W+++NP+LL +  +  DI E+RRL+ITPT+A
Sbjct: 362 DVNIASLKHLCTYNRPVFDAYKRLKLVQEWVLKNPKLLVSHERSDDISEIRRLVITPTRA 421

Query: 53  YCLPPEAELSNRVLRHY 3
           YCLPPE ELSNRVLR Y
Sbjct: 422 YCLPPEVELSNRVLRKY 438


>gb|ESW09024.1| hypothetical protein PHAVU_009G093700g [Phaseolus vulgaris]
          Length = 1204

 Score =  194 bits (493), Expect = 1e-47
 Identities = 89/141 (63%), Positives = 113/141 (80%)
 Frame = -1

Query: 425 KQLLRVKDEPGFSVHRADPFFCIQHKEGVAFDVTFMLNAAVHKGIINQHELSGRFFDLLR 246
           KQ LR  +EP F    ++PFF I ++ G+ FD+ F++NA VHKGI NQH LS RFF+LLR
Sbjct: 302 KQTLRALNEPDFGTPMSNPFFYIDYQVGITFDIMFLVNAIVHKGIFNQHRLSDRFFELLR 361

Query: 245 TQSAEVNIAALKHICSYKRPVFDAYRRLKLVQDWLVRNPRLLKTPAKLSDIVEVRRLIIT 66
            Q  E+N+AALKH+CSYKRPVFDA +RLK+VQ+WL+RNP+L +   +L DIVEVRRL+IT
Sbjct: 362 NQPKELNVAALKHLCSYKRPVFDATKRLKVVQEWLLRNPKLYQISKQLDDIVEVRRLVIT 421

Query: 65  PTKAYCLPPEAELSNRVLRHY 3
           P+KAYC+PPE ELSNRVLR +
Sbjct: 422 PSKAYCIPPEVELSNRVLRKF 442


>gb|AGU69384.1| RNA-dependendent RNA polymerase 6-like protein [Lotus japonicus]
          Length = 1201

 Score =  193 bits (490), Expect = 2e-47
 Identities = 88/141 (62%), Positives = 114/141 (80%)
 Frame = -1

Query: 425 KQLLRVKDEPGFSVHRADPFFCIQHKEGVAFDVTFMLNAAVHKGIINQHELSGRFFDLLR 246
           K+ LR++DEP F V  +D FF I  +EG+ FD+ F++NA +HKGI+N + LS RFF++LR
Sbjct: 300 KRPLRIQDEPNFGVPMSDDFFYIHCQEGITFDIMFLVNAVIHKGILNPYSLSDRFFEVLR 359

Query: 245 TQSAEVNIAALKHICSYKRPVFDAYRRLKLVQDWLVRNPRLLKTPAKLSDIVEVRRLIIT 66
            Q  EVN+AALKH+CSYKRPVFDA +RLK VQ+WL+RNP+L ++  +  DIVEVRRL+IT
Sbjct: 360 NQPQEVNVAALKHLCSYKRPVFDAAKRLKTVQEWLLRNPKLYQSSKQADDIVEVRRLVIT 419

Query: 65  PTKAYCLPPEAELSNRVLRHY 3
           PT+AYC+PPE ELSNRVLR Y
Sbjct: 420 PTRAYCVPPEHELSNRVLRRY 440


>ref|XP_003522618.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Glycine
           max] gi|571449461|ref|XP_006578148.1| PREDICTED:
           RNA-dependent RNA polymerase 6-like isoform X2 [Glycine
           max]
          Length = 1204

 Score =  193 bits (490), Expect = 2e-47
 Identities = 87/141 (61%), Positives = 114/141 (80%)
 Frame = -1

Query: 425 KQLLRVKDEPGFSVHRADPFFCIQHKEGVAFDVTFMLNAAVHKGIINQHELSGRFFDLLR 246
           KQ LR ++EP F +  +D FF +  ++ +AFD+ F++NA VHKGI NQH LS RFF+LLR
Sbjct: 302 KQTLRTQNEPDFGMPMSDAFFYVHFQKDIAFDIMFLVNAIVHKGIFNQHRLSDRFFELLR 361

Query: 245 TQSAEVNIAALKHICSYKRPVFDAYRRLKLVQDWLVRNPRLLKTPAKLSDIVEVRRLIIT 66
            Q  E+N+AALKH+CSYKRPVFDA +RLK+VQ+WL+RNP+L +   +L DIVEVRRL++T
Sbjct: 362 NQPKELNVAALKHLCSYKRPVFDATKRLKIVQEWLLRNPKLYQISKQLDDIVEVRRLVVT 421

Query: 65  PTKAYCLPPEAELSNRVLRHY 3
           P+KAYC+PPE ELSNRVLR +
Sbjct: 422 PSKAYCIPPEVELSNRVLRKF 442


>ref|XP_003526410.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Glycine
           max] gi|571459266|ref|XP_006581359.1| PREDICTED:
           RNA-dependent RNA polymerase 6-like isoform X2 [Glycine
           max]
          Length = 1204

 Score =  192 bits (489), Expect = 3e-47
 Identities = 89/141 (63%), Positives = 113/141 (80%)
 Frame = -1

Query: 425 KQLLRVKDEPGFSVHRADPFFCIQHKEGVAFDVTFMLNAAVHKGIINQHELSGRFFDLLR 246
           KQ LR  +EP F V  +D FF I  ++ +AFD+ F++NA VHKGI NQH LS RFF+LL+
Sbjct: 302 KQTLRTLNEPDFGVPMSDAFFYIHFQKDIAFDIMFLVNAIVHKGIFNQHRLSDRFFELLK 361

Query: 245 TQSAEVNIAALKHICSYKRPVFDAYRRLKLVQDWLVRNPRLLKTPAKLSDIVEVRRLIIT 66
            Q  E+N+AALKH+CSYKRPVFDA +RLK+VQ+WL+RNP+L +   +L DIVEVRRL+IT
Sbjct: 362 NQPKELNVAALKHLCSYKRPVFDATKRLKIVQEWLLRNPKLYQISKQLDDIVEVRRLVIT 421

Query: 65  PTKAYCLPPEAELSNRVLRHY 3
           P+KAYC+PPE ELSNRVLR +
Sbjct: 422 PSKAYCIPPEVELSNRVLRKF 442


>gb|EXB88201.1| RNA-dependent RNA polymerase 6 [Morus notabilis]
          Length = 1194

 Score =  192 bits (487), Expect = 5e-47
 Identities = 88/141 (62%), Positives = 109/141 (77%)
 Frame = -1

Query: 425 KQLLRVKDEPGFSVHRADPFFCIQHKEGVAFDVTFMLNAAVHKGIINQHELSGRFFDLLR 246
           ++ LR++ EP F+V  +DP F +  K G+ F++ F+LN  VHKGI NQH +S   FDL R
Sbjct: 296 RKALRIQSEPDFAVPMSDPIFYVHGKHGIPFEIMFLLNVIVHKGIFNQHNISDGLFDLFR 355

Query: 245 TQSAEVNIAALKHICSYKRPVFDAYRRLKLVQDWLVRNPRLLKTPAKLSDIVEVRRLIIT 66
            Q  E+N+AALKHI SYKRPVFDAY +LK VQ+WL+RNP+LLK P +L DI EVRRL+IT
Sbjct: 356 NQPREINLAALKHISSYKRPVFDAYAKLKNVQEWLLRNPKLLKIPRQLDDIAEVRRLVIT 415

Query: 65  PTKAYCLPPEAELSNRVLRHY 3
           PT+AYCLPPE ELSNRVLR Y
Sbjct: 416 PTRAYCLPPEVELSNRVLRKY 436


>gb|AAF74208.1|AF268093_1 RNA-dependent RNA polymerase [Arabidopsis thaliana]
          Length = 1196

 Score =  190 bits (483), Expect = 1e-46
 Identities = 83/137 (60%), Positives = 113/137 (82%)
 Frame = -1

Query: 413 RVKDEPGFSVHRADPFFCIQHKEGVAFDVTFMLNAAVHKGIINQHELSGRFFDLLRTQSA 234
           R+++EP F    +D FFCI HKEG++F++ F++N+ +H+G+ NQ +L+ RFFDLLR Q  
Sbjct: 302 RIRNEPCFGEPVSDHFFCIHHKEGISFEIMFLVNSVLHRGVFNQFQLTERFFDLLRNQPK 361

Query: 233 EVNIAALKHICSYKRPVFDAYRRLKLVQDWLVRNPRLLKTPAKLSDIVEVRRLIITPTKA 54
           +VNIA+LKH+C+YKRPVFDAY+RLKLVQ+W+ +NP+LL +  +  DI E+RRL+ITPT+A
Sbjct: 362 DVNIASLKHLCTYKRPVFDAYKRLKLVQEWIQKNPKLLGSHEQSEDISEIRRLVITPTRA 421

Query: 53  YCLPPEAELSNRVLRHY 3
           YCLPPE ELSNRVLR Y
Sbjct: 422 YCLPPEVELSNRVLRRY 438


>ref|NP_190519.1| RNA-dependent RNA polymerase 6 [Arabidopsis thaliana]
           gi|75337188|sp|Q9SG02.1|RDR6_ARATH RecName:
           Full=RNA-dependent RNA polymerase 6; Short=AtRDRP6;
           AltName: Full=Protein SILENCING DEFECTIVE 1; AltName:
           Full=Protein SUPPRESSOR OF GENE SILENCING 2; AltName:
           Full=RNA-directed RNA polymerase 6
           gi|12324444|gb|AAG52184.1|AC012329_11 putative
           RNA-directed RNA polymerase; 73997-69985 [Arabidopsis
           thaliana] gi|6899955|emb|CAB71285.1| RNA-directed RNA
           polymerase-like protein [Arabidopsis thaliana]
           gi|8164028|gb|AAF73959.1| SGS2 [Arabidopsis thaliana]
           gi|332645029|gb|AEE78550.1| RNA-dependent RNA polymerase
           6 [Arabidopsis thaliana]
          Length = 1196

 Score =  190 bits (483), Expect = 1e-46
 Identities = 83/137 (60%), Positives = 113/137 (82%)
 Frame = -1

Query: 413 RVKDEPGFSVHRADPFFCIQHKEGVAFDVTFMLNAAVHKGIINQHELSGRFFDLLRTQSA 234
           R+++EP F    +D FFCI HKEG++F++ F++N+ +H+G+ NQ +L+ RFFDLLR Q  
Sbjct: 302 RIRNEPCFGEPVSDHFFCIHHKEGISFEIMFLVNSVLHRGVFNQFQLTERFFDLLRNQPK 361

Query: 233 EVNIAALKHICSYKRPVFDAYRRLKLVQDWLVRNPRLLKTPAKLSDIVEVRRLIITPTKA 54
           +VNIA+LKH+C+YKRPVFDAY+RLKLVQ+W+ +NP+LL +  +  DI E+RRL+ITPT+A
Sbjct: 362 DVNIASLKHLCTYKRPVFDAYKRLKLVQEWIQKNPKLLGSHEQSEDISEIRRLVITPTRA 421

Query: 53  YCLPPEAELSNRVLRHY 3
           YCLPPE ELSNRVLR Y
Sbjct: 422 YCLPPEVELSNRVLRRY 438


>ref|XP_002877681.1| RNA-dependent RNA polymerase 6 [Arabidopsis lyrata subsp. lyrata]
           gi|297323519|gb|EFH53940.1| RNA-dependent RNA polymerase
           6 [Arabidopsis lyrata subsp. lyrata]
          Length = 1197

 Score =  190 bits (482), Expect = 2e-46
 Identities = 83/137 (60%), Positives = 113/137 (82%)
 Frame = -1

Query: 413 RVKDEPGFSVHRADPFFCIQHKEGVAFDVTFMLNAAVHKGIINQHELSGRFFDLLRTQSA 234
           R+++EP F    +D FFCI HKEG++F++ F++N+ +H+G+ NQ +L+ RFFDLLR Q  
Sbjct: 302 RIRNEPCFGEPVSDHFFCIHHKEGISFEIMFLVNSVLHRGVFNQFQLTERFFDLLRNQPK 361

Query: 233 EVNIAALKHICSYKRPVFDAYRRLKLVQDWLVRNPRLLKTPAKLSDIVEVRRLIITPTKA 54
           +VNIA+LKH+C+YKRPVFDAY+RLKLVQ+W+++NP+LL    +  DI E+RRL+ITPT+A
Sbjct: 362 DVNIASLKHLCTYKRPVFDAYKRLKLVQEWILKNPKLLGGHEQSEDISEIRRLVITPTRA 421

Query: 53  YCLPPEAELSNRVLRHY 3
           YCLPPE ELSNRVLR Y
Sbjct: 422 YCLPPEVELSNRVLRKY 438