BLASTX nr result
ID: Achyranthes23_contig00020132
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Achyranthes23_contig00020132
(456 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002282354.1| PREDICTED: splicing factor 3B subunit 3-like... 223 3e-56
emb|CAN64633.1| hypothetical protein VITISV_043788 [Vitis vinifera] 223 3e-56
gb|EXB65348.1| Splicing factor 3B subunit 3 [Morus notabilis] gi... 215 4e-54
ref|XP_004147708.1| PREDICTED: splicing factor 3B subunit 3-like... 214 1e-53
gb|EOY18375.1| Cleavage and polyadenylation specificity factor (... 210 1e-52
gb|EMJ20092.1| hypothetical protein PRUPE_ppa000395mg [Prunus pe... 210 1e-52
gb|ESW14695.1| hypothetical protein PHAVU_007G009600g [Phaseolus... 210 2e-52
gb|AEY85032.1| spliceosomal-like protein [Camellia sinensis] 209 3e-52
ref|XP_002876288.1| predicted protein [Arabidopsis lyrata subsp.... 208 5e-52
ref|XP_002534515.1| spliceosomal protein sap, putative [Ricinus ... 208 5e-52
ref|XP_006486011.1| PREDICTED: splicing factor 3B subunit 3-like... 208 7e-52
ref|XP_006436128.1| hypothetical protein CICLE_v10030532mg [Citr... 208 7e-52
ref|XP_004236765.1| PREDICTED: splicing factor 3B subunit 3-like... 208 7e-52
ref|XP_002878025.1| hypothetical protein ARALYDRAFT_906938 [Arab... 208 7e-52
ref|XP_003556541.1| PREDICTED: splicing factor 3B subunit 3-like... 207 9e-52
ref|XP_003536777.1| PREDICTED: splicing factor 3B subunit 3-like... 207 1e-51
ref|XP_002315251.1| splicing factor family protein [Populus tric... 207 1e-51
ref|NP_567015.1| spliceosomal associated protein 130A [Arabidops... 207 2e-51
ref|XP_002312063.1| splicing factor family protein [Populus tric... 206 2e-51
ref|XP_003609420.1| Splicing factor 3B subunit [Medicago truncat... 205 4e-51
>ref|XP_002282354.1| PREDICTED: splicing factor 3B subunit 3-like [Vitis vinifera]
Length = 1214
Score = 223 bits (567), Expect = 3e-56
Identities = 116/158 (73%), Positives = 129/158 (81%), Gaps = 7/158 (4%)
Frame = +2
Query: 2 FVLQPKRKLLVMIESDNRALTAEEREVAQKECF---GVGVDENGNLE-MENG--DEDEDN 163
FVLQPKRKLLV+IESD A AEERE A+KECF G+G + NGN+E MENG DED+D+
Sbjct: 783 FVLQPKRKLLVVIESDQGAFAAEEREAAKKECFEAAGMGENGNGNVEQMENGGDDEDKDD 842
Query: 164 HLSDEQYGYPKVEKEKWVSCIRVLDPRXXXXXXXXXXQENEAAFSLCTVNFHDKEYGTLL 343
LSDEQYGYPK E +KWVSCIR+LDPR Q+NEAAFS+CTVNFHDKEYGTLL
Sbjct: 843 PLSDEQYGYPKAESDKWVSCIRILDPRTATTTCLLELQDNEAAFSICTVNFHDKEYGTLL 902
Query: 344 AVGTAKSLQFFPKRSFDAAYIHIYRFVEGGK-LELLHK 454
AVGTAKSLQF+PKRSFDA YIHIYRF+E GK LELLHK
Sbjct: 903 AVGTAKSLQFWPKRSFDAGYIHIYRFLEDGKSLELLHK 940
>emb|CAN64633.1| hypothetical protein VITISV_043788 [Vitis vinifera]
Length = 1143
Score = 223 bits (567), Expect = 3e-56
Identities = 116/158 (73%), Positives = 129/158 (81%), Gaps = 7/158 (4%)
Frame = +2
Query: 2 FVLQPKRKLLVMIESDNRALTAEEREVAQKECF---GVGVDENGNLE-MENG--DEDEDN 163
FVLQPKRKLLV+IESD A AEERE A+KECF G+G + NGN+E MENG DED+D+
Sbjct: 742 FVLQPKRKLLVVIESDQGAFAAEEREAAKKECFEAAGMGENGNGNVEQMENGGDDEDKDD 801
Query: 164 HLSDEQYGYPKVEKEKWVSCIRVLDPRXXXXXXXXXXQENEAAFSLCTVNFHDKEYGTLL 343
LSDEQYGYPK E +KWVSCIR+LDPR Q+NEAAFS+CTVNFHDKEYGTLL
Sbjct: 802 PLSDEQYGYPKAESDKWVSCIRILDPRTATTTCLLELQDNEAAFSICTVNFHDKEYGTLL 861
Query: 344 AVGTAKSLQFFPKRSFDAAYIHIYRFVEGGK-LELLHK 454
AVGTAKSLQF+PKRSFDA YIHIYRF+E GK LELLHK
Sbjct: 862 AVGTAKSLQFWPKRSFDAGYIHIYRFLEDGKSLELLHK 899
>gb|EXB65348.1| Splicing factor 3B subunit 3 [Morus notabilis]
gi|587968855|gb|EXC53862.1| Splicing factor 3B subunit 3
[Morus notabilis]
Length = 1213
Score = 215 bits (548), Expect = 4e-54
Identities = 110/157 (70%), Positives = 123/157 (78%), Gaps = 6/157 (3%)
Frame = +2
Query: 2 FVLQPKRKLLVMIESDNRALTAEEREVAQKECF---GVGVDENGNLEMENG--DEDEDNH 166
FVLQPKRKLLV+IE D A AEERE A+KECF G+G + NGN+EMENG DED D+
Sbjct: 783 FVLQPKRKLLVIIEGDQGAFPAEEREAAKKECFEASGMGENGNGNMEMENGGEDEDRDDP 842
Query: 167 LSDEQYGYPKVEKEKWVSCIRVLDPRXXXXXXXXXXQENEAAFSLCTVNFHDKEYGTLLA 346
LSDE YGYPK E ++WVSCIRVLDP+ Q+NEAAFS+CTVNFHDKEYGTLLA
Sbjct: 843 LSDEHYGYPKAESDRWVSCIRVLDPKTSSTTCLLELQDNEAAFSICTVNFHDKEYGTLLA 902
Query: 347 VGTAKSLQFFPKRSFDAAYIHIYRFVEGGK-LELLHK 454
VGTAK LQFFPKRS A +IHIYRF+E GK LELLHK
Sbjct: 903 VGTAKGLQFFPKRSLTAGFIHIYRFLEDGKSLELLHK 939
>ref|XP_004147708.1| PREDICTED: splicing factor 3B subunit 3-like [Cucumis sativus]
gi|449513493|ref|XP_004164340.1| PREDICTED: splicing
factor 3B subunit 3-like [Cucumis sativus]
Length = 1214
Score = 214 bits (545), Expect = 1e-53
Identities = 114/158 (72%), Positives = 123/158 (77%), Gaps = 7/158 (4%)
Frame = +2
Query: 2 FVLQPKRKLLVMIESDNRALTAEEREVAQKECF-GVGVDENGNL---EMENG--DEDEDN 163
FVLQP+RKLLV+IESD A TAEERE A+KECF G ENGN +MENG DED+D+
Sbjct: 783 FVLQPRRKLLVVIESDQGAFTAEEREAAKKECFEAAGAGENGNGTMDQMENGGDDEDKDD 842
Query: 164 HLSDEQYGYPKVEKEKWVSCIRVLDPRXXXXXXXXXXQENEAAFSLCTVNFHDKEYGTLL 343
LSDE YGYPK E EKWVSCIRVLDPR Q+NEAAFS+CTVNFHDKEYGTLL
Sbjct: 843 PLSDEHYGYPKAESEKWVSCIRVLDPRSATTTCLLELQDNEAAFSVCTVNFHDKEYGTLL 902
Query: 344 AVGTAKSLQFFPKRSFDAAYIHIYRFVEGGK-LELLHK 454
AVGTAK LQFFPKRS A YIHIYRF+E GK LELLHK
Sbjct: 903 AVGTAKGLQFFPKRSLVAGYIHIYRFLEDGKSLELLHK 940
>gb|EOY18375.1| Cleavage and polyadenylation specificity factor (CPSF) A subunit
protein isoform 1 [Theobroma cacao]
Length = 1214
Score = 210 bits (535), Expect = 1e-52
Identities = 110/158 (69%), Positives = 127/158 (80%), Gaps = 7/158 (4%)
Frame = +2
Query: 2 FVLQPKRKLLVMIESDNRALTAEEREVAQKECF---GVGVDENGNLE-MENG--DEDEDN 163
FVLQPKRKLLV+IESD + TAEEREVA+KECF G+G + NGN++ MENG DED+++
Sbjct: 783 FVLQPKRKLLVIIESDQGSYTAEEREVARKECFEAAGMGENGNGNVDQMENGGDDEDKED 842
Query: 164 HLSDEQYGYPKVEKEKWVSCIRVLDPRXXXXXXXXXXQENEAAFSLCTVNFHDKEYGTLL 343
LSDEQYGYPK E +KWVSCIRVLDPR Q+NEAAFS+CTVNFHDKEYGTLL
Sbjct: 843 PLSDEQYGYPKAESDKWVSCIRVLDPRTATTTCLLELQDNEAAFSVCTVNFHDKEYGTLL 902
Query: 344 AVGTAKSLQFFPKRSFDAAYIHIYRFVEGGK-LELLHK 454
AVGTAK LQF+PKRS +IHIYRF+E G+ LELLHK
Sbjct: 903 AVGTAKGLQFWPKRSLVTGFIHIYRFLEDGRSLELLHK 940
>gb|EMJ20092.1| hypothetical protein PRUPE_ppa000395mg [Prunus persica]
gi|462415356|gb|EMJ20093.1| hypothetical protein
PRUPE_ppa000395mg [Prunus persica]
Length = 1212
Score = 210 bits (535), Expect = 1e-52
Identities = 108/156 (69%), Positives = 124/156 (79%), Gaps = 5/156 (3%)
Frame = +2
Query: 2 FVLQPKRKLLVMIESDNRALTAEEREVAQKECF---GVGVDENGNLE-MENGDEDEDNHL 169
FV+Q KRKLLV+IESD A TAEERE A+KECF G+G + NGN++ MENG ++ED+ L
Sbjct: 783 FVVQLKRKLLVIIESDQGAFTAEEREAAKKECFEAAGIGENGNGNVDQMENGGDNEDDPL 842
Query: 170 SDEQYGYPKVEKEKWVSCIRVLDPRXXXXXXXXXXQENEAAFSLCTVNFHDKEYGTLLAV 349
SDE YGYPK E EKWVSCIRVLDP+ Q+NEAAFS+CTVNFHDKEYGTLLAV
Sbjct: 843 SDEHYGYPKAESEKWVSCIRVLDPKTATTTCLLELQDNEAAFSICTVNFHDKEYGTLLAV 902
Query: 350 GTAKSLQFFPKRSFDAAYIHIYRFVEGGK-LELLHK 454
GTAK LQF+PKRS A YIHIYRF++ GK LELLHK
Sbjct: 903 GTAKGLQFWPKRSVTAGYIHIYRFLDDGKSLELLHK 938
>gb|ESW14695.1| hypothetical protein PHAVU_007G009600g [Phaseolus vulgaris]
Length = 1214
Score = 210 bits (534), Expect = 2e-52
Identities = 113/158 (71%), Positives = 121/158 (76%), Gaps = 7/158 (4%)
Frame = +2
Query: 2 FVLQPKRKLLVMIESDNRALTAEEREVAQKECFGVG-VDENGNL---EMENG--DEDEDN 163
FVLQPKRKLLVMIESD ALTAEERE A+KECF ENG +MENG DED+D+
Sbjct: 783 FVLQPKRKLLVMIESDQGALTAEEREAARKECFEAAQAGENGTGSADQMENGGDDEDKDD 842
Query: 164 HLSDEQYGYPKVEKEKWVSCIRVLDPRXXXXXXXXXXQENEAAFSLCTVNFHDKEYGTLL 343
LSDE YGYPK E EKWVSCIRVLDPR QENEAAFS+CTVNFHDKEYGTLL
Sbjct: 843 PLSDEHYGYPKAESEKWVSCIRVLDPRTGNTTCLLELQENEAAFSICTVNFHDKEYGTLL 902
Query: 344 AVGTAKSLQFFPKRSFDAAYIHIYRFVEGGK-LELLHK 454
AVGTAK LQF PKR+ A +IHIYRFVE G+ LELLHK
Sbjct: 903 AVGTAKGLQFLPKRTVTAGFIHIYRFVEDGRSLELLHK 940
>gb|AEY85032.1| spliceosomal-like protein [Camellia sinensis]
Length = 1212
Score = 209 bits (532), Expect = 3e-52
Identities = 110/156 (70%), Positives = 124/156 (79%), Gaps = 5/156 (3%)
Frame = +2
Query: 2 FVLQPKRKLLVMIESDNRALTAEEREVAQKECF-GVGVDENGNLE-MENG--DEDEDNHL 169
FVLQPKRKLLV+IESD A AE+RE A+KECF G+ ENG +E MENG DED+++ L
Sbjct: 783 FVLQPKRKLLVIIESDQGAYAAEQRENAKKECFEDAGMGENGKVEQMENGGDDEDKEDPL 842
Query: 170 SDEQYGYPKVEKEKWVSCIRVLDPRXXXXXXXXXXQENEAAFSLCTVNFHDKEYGTLLAV 349
SDEQYGYPKVE ++WVSCIRVLDPR Q+NEAAFS+C VNFHDKEYGTLLAV
Sbjct: 843 SDEQYGYPKVESDRWVSCIRVLDPRTANTTCLLELQDNEAAFSICLVNFHDKEYGTLLAV 902
Query: 350 GTAKSLQFFPKRSFDAAYIHIYRFVEGGK-LELLHK 454
GTAK LQF+PKRS + YIHIYRFVE GK LELLHK
Sbjct: 903 GTAKGLQFWPKRSISSGYIHIYRFVEDGKSLELLHK 938
>ref|XP_002876288.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322126|gb|EFH52547.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 633
Score = 208 bits (530), Expect = 5e-52
Identities = 109/158 (68%), Positives = 125/158 (79%), Gaps = 7/158 (4%)
Frame = +2
Query: 2 FVLQPKRKLLVMIESDNRALTAEEREVAQKECF---GVGVDENGNLE-MENG--DEDEDN 163
FVLQPKRKLLV+IESD A TAEERE A+KECF GVG + NGN + MENG DED+++
Sbjct: 202 FVLQPKRKLLVIIESDQGAFTAEEREAARKECFEAGGVGENGNGNADQMENGADDEDKED 261
Query: 164 HLSDEQYGYPKVEKEKWVSCIRVLDPRXXXXXXXXXXQENEAAFSLCTVNFHDKEYGTLL 343
LSDEQYGYPK E EKWVSCIRVLDP+ Q+NEAA+S+CTVNFHDKEYGTLL
Sbjct: 262 PLSDEQYGYPKAESEKWVSCIRVLDPKTATTTCLLELQDNEAAYSVCTVNFHDKEYGTLL 321
Query: 344 AVGTAKSLQFFPKRSFDAAYIHIYRFVEGGK-LELLHK 454
AVGT K +QF+PK++ A +IHIYRFVE GK LELLHK
Sbjct: 322 AVGTVKGMQFWPKKNLVAGFIHIYRFVEEGKSLELLHK 359
>ref|XP_002534515.1| spliceosomal protein sap, putative [Ricinus communis]
gi|223525135|gb|EEF27867.1| spliceosomal protein sap,
putative [Ricinus communis]
Length = 1214
Score = 208 bits (530), Expect = 5e-52
Identities = 108/157 (68%), Positives = 125/157 (79%), Gaps = 6/157 (3%)
Frame = +2
Query: 2 FVLQPKRKLLVMIESDNRALTAEEREVAQKECF-GVGVDENGNL---EMENGD-EDEDNH 166
FVLQPK+KLLV++ESD A TAEERE A+KECF G+ ENG+ +MENGD ED+D+
Sbjct: 784 FVLQPKKKLLVIVESDQGAYTAEEREAAKKECFEAAGMGENGSANAEQMENGDDEDKDDP 843
Query: 167 LSDEQYGYPKVEKEKWVSCIRVLDPRXXXXXXXXXXQENEAAFSLCTVNFHDKEYGTLLA 346
LSDEQYGYPK E EKWVSCIRVLDPR Q+NEAAFS+CTVNFHDKE+GTLLA
Sbjct: 844 LSDEQYGYPKAEAEKWVSCIRVLDPRTAATTCLLELQDNEAAFSVCTVNFHDKEHGTLLA 903
Query: 347 VGTAKSLQFFPKRSFDAAYIHIYRFVEGGK-LELLHK 454
VGTAK LQF+PKRS A +IHIY+FV+ G+ LELLHK
Sbjct: 904 VGTAKGLQFWPKRSLSAGFIHIYKFVDDGRALELLHK 940
>ref|XP_006486011.1| PREDICTED: splicing factor 3B subunit 3-like [Citrus sinensis]
Length = 1213
Score = 208 bits (529), Expect = 7e-52
Identities = 109/157 (69%), Positives = 127/157 (80%), Gaps = 6/157 (3%)
Frame = +2
Query: 2 FVLQPKRKLLVMIESDNRALTAEEREVAQKECF---GVGVDENGNLE-MENGD-EDEDNH 166
FVLQPK+KL+V+IE+D ALTAEERE A+KECF G+G + NGN++ MENGD E++ +
Sbjct: 783 FVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMENGDDENKYDP 842
Query: 167 LSDEQYGYPKVEKEKWVSCIRVLDPRXXXXXXXXXXQENEAAFSLCTVNFHDKEYGTLLA 346
LSDEQYGYPK E +KWVSCIRVLDPR Q+NEAAFS+CTVNFHDKE+GTLLA
Sbjct: 843 LSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLA 902
Query: 347 VGTAKSLQFFPKRSFDAAYIHIYRFVEGGK-LELLHK 454
VGTAK LQF+PKR+ A YIHIYRFVE GK LELLHK
Sbjct: 903 VGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHK 939
>ref|XP_006436128.1| hypothetical protein CICLE_v10030532mg [Citrus clementina]
gi|557538324|gb|ESR49368.1| hypothetical protein
CICLE_v10030532mg [Citrus clementina]
Length = 1277
Score = 208 bits (529), Expect = 7e-52
Identities = 109/157 (69%), Positives = 127/157 (80%), Gaps = 6/157 (3%)
Frame = +2
Query: 2 FVLQPKRKLLVMIESDNRALTAEEREVAQKECF---GVGVDENGNLE-MENGD-EDEDNH 166
FVLQPK+KL+V+IE+D ALTAEERE A+KECF G+G + NGN++ MENGD E++ +
Sbjct: 847 FVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMENGDDENKYDP 906
Query: 167 LSDEQYGYPKVEKEKWVSCIRVLDPRXXXXXXXXXXQENEAAFSLCTVNFHDKEYGTLLA 346
LSDEQYGYPK E +KWVSCIRVLDPR Q+NEAAFS+CTVNFHDKE+GTLLA
Sbjct: 907 LSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLA 966
Query: 347 VGTAKSLQFFPKRSFDAAYIHIYRFVEGGK-LELLHK 454
VGTAK LQF+PKR+ A YIHIYRFVE GK LELLHK
Sbjct: 967 VGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHK 1003
>ref|XP_004236765.1| PREDICTED: splicing factor 3B subunit 3-like [Solanum lycopersicum]
Length = 1211
Score = 208 bits (529), Expect = 7e-52
Identities = 108/155 (69%), Positives = 123/155 (79%), Gaps = 4/155 (2%)
Frame = +2
Query: 2 FVLQPKRKLLVMIESDNRALTAEEREVAQKECF-GVGVDENGNLE-MENG-DEDEDNHLS 172
FVLQPK+K+++MIESD A TAEERE A+KECF G ENGN E MENG DED+ + LS
Sbjct: 783 FVLQPKKKMVIMIESDQGAYTAEEREAAKKECFEAAGNSENGNAEQMENGEDEDDSDPLS 842
Query: 173 DEQYGYPKVEKEKWVSCIRVLDPRXXXXXXXXXXQENEAAFSLCTVNFHDKEYGTLLAVG 352
DEQYGYPK E +WVSCIRVLDPR Q+NEAAFS+CTVNFHDKE+G LLAVG
Sbjct: 843 DEQYGYPKSESGRWVSCIRVLDPRTMQTTCLLELQDNEAAFSICTVNFHDKEHGALLAVG 902
Query: 353 TAKSLQFFPKRSFDAAYIHIYRFVEGGK-LELLHK 454
TAK LQF+PK+SF+AAYIHIY+F E GK LELLHK
Sbjct: 903 TAKGLQFWPKKSFEAAYIHIYKFKEDGKVLELLHK 937
>ref|XP_002878025.1| hypothetical protein ARALYDRAFT_906938 [Arabidopsis lyrata subsp.
lyrata] gi|297323863|gb|EFH54284.1| hypothetical protein
ARALYDRAFT_906938 [Arabidopsis lyrata subsp. lyrata]
Length = 454
Score = 208 bits (529), Expect = 7e-52
Identities = 108/158 (68%), Positives = 125/158 (79%), Gaps = 7/158 (4%)
Frame = +2
Query: 2 FVLQPKRKLLVMIESDNRALTAEEREVAQKECF---GVGVDENGNLE-MENG--DEDEDN 163
FVLQPKRKLLV+IESD A TAEERE A+KECF GVG + NGN + MENG DED+++
Sbjct: 23 FVLQPKRKLLVIIESDQGAFTAEEREAARKECFEAGGVGENGNGNADQMENGADDEDKED 82
Query: 164 HLSDEQYGYPKVEKEKWVSCIRVLDPRXXXXXXXXXXQENEAAFSLCTVNFHDKEYGTLL 343
LSDEQYGYPK E EKWVSCIR+LDP+ Q+NEAA+S+CTVNFHDKEYGTLL
Sbjct: 83 PLSDEQYGYPKAESEKWVSCIRILDPKTATTTCLLELQDNEAAYSVCTVNFHDKEYGTLL 142
Query: 344 AVGTAKSLQFFPKRSFDAAYIHIYRFVEGGK-LELLHK 454
AVGT K +QF+PK++ A +IHIYRFVE GK LELLHK
Sbjct: 143 AVGTVKGMQFWPKKNLVAGFIHIYRFVEEGKSLELLHK 180
>ref|XP_003556541.1| PREDICTED: splicing factor 3B subunit 3-like [Glycine max]
Length = 1214
Score = 207 bits (528), Expect = 9e-52
Identities = 110/158 (69%), Positives = 120/158 (75%), Gaps = 7/158 (4%)
Frame = +2
Query: 2 FVLQPKRKLLVMIESDNRALTAEEREVAQKECF-GVGVDENGNL---EMENG--DEDEDN 163
FVLQPKRKLLVMIESD ALTAEERE A+KECF ENG +MENG DED+D+
Sbjct: 783 FVLQPKRKLLVMIESDQGALTAEEREAARKECFESAQAGENGTESADQMENGGEDEDKDD 842
Query: 164 HLSDEQYGYPKVEKEKWVSCIRVLDPRXXXXXXXXXXQENEAAFSLCTVNFHDKEYGTLL 343
LSDE YGYPK E +KW SCIRVLDPR QENEAAFS+CT+NFHDKEYGTLL
Sbjct: 843 PLSDEHYGYPKAESDKWASCIRVLDPRTGNTTCLLELQENEAAFSICTINFHDKEYGTLL 902
Query: 344 AVGTAKSLQFFPKRSFDAAYIHIYRFVEGGK-LELLHK 454
AVGTAK LQF PKR+ A +IHIYRFVE G+ LELLHK
Sbjct: 903 AVGTAKGLQFLPKRTITAGFIHIYRFVEDGRSLELLHK 940
>ref|XP_003536777.1| PREDICTED: splicing factor 3B subunit 3-like [Glycine max]
Length = 1214
Score = 207 bits (527), Expect = 1e-51
Identities = 111/158 (70%), Positives = 120/158 (75%), Gaps = 7/158 (4%)
Frame = +2
Query: 2 FVLQPKRKLLVMIESDNRALTAEEREVAQKECFGVG-VDENGNL---EMENG--DEDEDN 163
FVLQPKRKLLVMIESD ALTAEERE A+KECF ENG +MENG DED+D+
Sbjct: 783 FVLQPKRKLLVMIESDQGALTAEEREAARKECFEAAQAGENGTGSADQMENGGDDEDKDD 842
Query: 164 HLSDEQYGYPKVEKEKWVSCIRVLDPRXXXXXXXXXXQENEAAFSLCTVNFHDKEYGTLL 343
LSDE YGYPK E +KW SCIRVLDPR QENEAAFS+CTVNFHDKEYGTLL
Sbjct: 843 PLSDEHYGYPKAESDKWASCIRVLDPRTSNTTCLLELQENEAAFSICTVNFHDKEYGTLL 902
Query: 344 AVGTAKSLQFFPKRSFDAAYIHIYRFVEGGK-LELLHK 454
AVGTAK LQF PKR+ A +IHIYRFVE G+ LELLHK
Sbjct: 903 AVGTAKGLQFLPKRTVTAGFIHIYRFVEDGRSLELLHK 940
>ref|XP_002315251.1| splicing factor family protein [Populus trichocarpa]
gi|222864291|gb|EEF01422.1| splicing factor family
protein [Populus trichocarpa]
Length = 1213
Score = 207 bits (527), Expect = 1e-51
Identities = 109/157 (69%), Positives = 124/157 (78%), Gaps = 6/157 (3%)
Frame = +2
Query: 2 FVLQPKRKLLVMIESDNRALTAEEREVAQKECFGV-GVDENGNL---EMENGDEDE-DNH 166
FVLQPKRKLLV+IESD A TAEERE A+KECF G+ ENG+ +MENGD+D+ D+
Sbjct: 783 FVLQPKRKLLVIIESDQGAYTAEEREAAKKECFEASGMGENGSASAEQMENGDDDDKDDP 842
Query: 167 LSDEQYGYPKVEKEKWVSCIRVLDPRXXXXXXXXXXQENEAAFSLCTVNFHDKEYGTLLA 346
LSDEQYGYPK E +KWVSCIRVLDPR Q+NEAAFSLCTVNFHDKE+GTLLA
Sbjct: 843 LSDEQYGYPKAESDKWVSCIRVLDPRSAATTCLLELQDNEAAFSLCTVNFHDKEHGTLLA 902
Query: 347 VGTAKSLQFFPKRSFDAAYIHIYRFVEGGK-LELLHK 454
VGTAK LQF+PKRS +IHIY+FV+ GK LELLHK
Sbjct: 903 VGTAKGLQFWPKRSLVTGFIHIYKFVDDGKSLELLHK 939
>ref|NP_567015.1| spliceosomal associated protein 130A [Arabidopsis thaliana]
gi|18410226|ref|NP_567016.1| spliceosome-associated
protein 130B [Arabidopsis thaliana]
gi|7019653|emb|CAB75754.1| spliceosomal-like protein
[Arabidopsis thaliana] gi|7019655|emb|CAB75756.1|
spliceosomal-like protein [Arabidopsis thaliana]
gi|332645831|gb|AEE79352.1| spliceosomal associated
protein 130A [Arabidopsis thaliana]
gi|332645833|gb|AEE79354.1| spliceosome-associated
protein 130B [Arabidopsis thaliana]
Length = 1214
Score = 207 bits (526), Expect = 2e-51
Identities = 108/158 (68%), Positives = 124/158 (78%), Gaps = 7/158 (4%)
Frame = +2
Query: 2 FVLQPKRKLLVMIESDNRALTAEEREVAQKECF---GVGVDENGNLE-MENG--DEDEDN 163
FVL PKRKLLV+IESD A TAEERE A+KECF GVG + NGN + MENG DED+++
Sbjct: 783 FVLHPKRKLLVIIESDQGAFTAEEREAARKECFEAGGVGENGNGNADQMENGADDEDKED 842
Query: 164 HLSDEQYGYPKVEKEKWVSCIRVLDPRXXXXXXXXXXQENEAAFSLCTVNFHDKEYGTLL 343
LSDEQYGYPK E EKWVSCIRVLDP+ Q+NEAA+S+CTVNFHDKEYGTLL
Sbjct: 843 PLSDEQYGYPKAESEKWVSCIRVLDPKTATTTCLLELQDNEAAYSVCTVNFHDKEYGTLL 902
Query: 344 AVGTAKSLQFFPKRSFDAAYIHIYRFVEGGK-LELLHK 454
AVGT K +QF+PK++ A +IHIYRFVE GK LELLHK
Sbjct: 903 AVGTVKGMQFWPKKNLVAGFIHIYRFVEDGKSLELLHK 940
>ref|XP_002312063.1| splicing factor family protein [Populus trichocarpa]
gi|222851883|gb|EEE89430.1| splicing factor family
protein [Populus trichocarpa]
Length = 1213
Score = 206 bits (525), Expect = 2e-51
Identities = 108/157 (68%), Positives = 125/157 (79%), Gaps = 6/157 (3%)
Frame = +2
Query: 2 FVLQPKRKLLVMIESDNRALTAEEREVAQKECF-GVGVDENGNL---EMENGDEDE-DNH 166
FVLQPKRKLLV+IESD A TAEERE A+KECF G+ ENG+ +MENGD+D+ D+
Sbjct: 783 FVLQPKRKLLVIIESDQGAYTAEEREAAKKECFEAAGMGENGSANAEKMENGDDDDKDDP 842
Query: 167 LSDEQYGYPKVEKEKWVSCIRVLDPRXXXXXXXXXXQENEAAFSLCTVNFHDKEYGTLLA 346
LSDEQYGYPK E ++WVSCIRVLDPR Q+NEAAFS+CTVNFHDKE+GTLLA
Sbjct: 843 LSDEQYGYPKAEADRWVSCIRVLDPRSATTTCLLELQDNEAAFSVCTVNFHDKEHGTLLA 902
Query: 347 VGTAKSLQFFPKRSFDAAYIHIYRFVEGGK-LELLHK 454
VGTAK LQF+PKRS A +IHIY+FV+ GK LELLHK
Sbjct: 903 VGTAKGLQFWPKRSLIAGFIHIYKFVDDGKSLELLHK 939
>ref|XP_003609420.1| Splicing factor 3B subunit [Medicago truncatula]
gi|355510475|gb|AES91617.1| Splicing factor 3B subunit
[Medicago truncatula]
Length = 1225
Score = 205 bits (522), Expect = 4e-51
Identities = 110/158 (69%), Positives = 122/158 (77%), Gaps = 7/158 (4%)
Frame = +2
Query: 2 FVLQPKRKLLVMIESDNRALTAEEREVAQKECFGV---GVDENGNLE-MENGDEDEDNH- 166
FVLQPKRKLLV+IESD ALTAEERE A+KECF G ++ G+ + MENG EDEDN
Sbjct: 794 FVLQPKRKLLVVIESDQGALTAEEREAARKECFEAAHAGENKTGSEDQMENGGEDEDNDD 853
Query: 167 -LSDEQYGYPKVEKEKWVSCIRVLDPRXXXXXXXXXXQENEAAFSLCTVNFHDKEYGTLL 343
LSDE YGYPK E +KWVSCIRVLDPR QENEAAFS+CTVNFHDKEYGTLL
Sbjct: 854 SLSDEHYGYPKSESDKWVSCIRVLDPRTGNTTCLLELQENEAAFSICTVNFHDKEYGTLL 913
Query: 344 AVGTAKSLQFFPKRSFDAAYIHIYRFVEGGK-LELLHK 454
AVGTAK LQF PKRS A +IHIYRF++ G+ LELLHK
Sbjct: 914 AVGTAKGLQFTPKRSLTAGFIHIYRFLDDGRSLELLHK 951