BLASTX nr result

ID: Achyranthes23_contig00019210 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00019210
         (1872 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY20387.1| F-box family protein [Theobroma cacao]                  54   1e-09
ref|XP_002527480.1| conserved hypothetical protein [Ricinus comm...    40   9e-07
gb|EOY27068.1| F-box family protein [Theobroma cacao]                  46   8e-06

>gb|EOY20387.1| F-box family protein [Theobroma cacao]
          Length = 357

 Score = 53.5 bits (127), Expect(3) = 1e-09
 Identities = 26/68 (38%), Positives = 46/68 (67%)
 Frame = +1

Query: 115 LPMDMWQEMLSRMPVKTLLKLRCLWKTCKSIIDSSSFTSKHMQVYNGRENLVLAMEYLVP 294
           LP D+  E+LSR+PVK+LL+ RC+ +T   ++ SS F +KH+Q  N +++  L ++Y   
Sbjct: 6   LPRDLIIEILSRLPVKSLLRFRCVHRTWLCLLKSSYFITKHVQNPNNKDHGFLFIKYTDV 65

Query: 295 SRISKFTI 318
           S +S++ +
Sbjct: 66  SGMSRYKL 73



 Score = 32.7 bits (73), Expect(3) = 1e-09
 Identities = 32/116 (27%), Positives = 46/116 (39%), Gaps = 4/116 (3%)
 Frame = +1

Query: 508 RLHEVRHVLGFVPSTNVHKVVAFVFGWSSN----VKPLSLLIYQLGD*SWRMKPDDITCS 675
           RLH V   LG+    N  KVV      S      V      ++ LG  SW+    ++  S
Sbjct: 141 RLHHVTFGLGYDSVNNDFKVVRVASSESHKEGKLVSSTQAEVHTLGMNSWK----EVAIS 196

Query: 676 GCSFPNLRSNCPVVSVDGAAYWIDYYPSQKTSKEDTHLFSFEFKLEKFRFWELPDY 843
             S  N     P    +GA +W+      K   +   + SFE   E F+ + LPD+
Sbjct: 197 --SGVNFEVYGPQAFFNGAIHWLGMVLKNKNITQV--IVSFEVSTEVFKLFPLPDF 248



 Score = 24.6 bits (52), Expect(3) = 1e-09
 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = +2

Query: 335 NEVAQLFEIPEP--CVIAGNCNGLLLLKTLYQNRFNQCKLVNPSTRKSIDLPMLT 493
           +EV+   +IP P    + G+CNGL+ L   +     +  L NP+ R    +P  T
Sbjct: 79  SEVSLDLKIPFPSWASVVGSCNGLVCLYIDHPFPCTKILLYNPALRVHKIIPEST 133


>ref|XP_002527480.1| conserved hypothetical protein [Ricinus communis]
           gi|223533120|gb|EEF34878.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 379

 Score = 39.7 bits (91), Expect(3) = 9e-07
 Identities = 20/73 (27%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
 Frame = +1

Query: 106 LSTLPMDMWQEMLSRMPVKTLLKLRCLWKTCKSIIDSSSFTSKHMQ--VYNGRENLVLAM 279
           L  +P ++  ++  R+PVK LL+ RC+ KT  S+I + +F S H +  + +   N ++  
Sbjct: 2   LDHIPKEVLIKIFLRLPVKQLLRCRCICKTWYSLISNHNFISTHSRYTIDSNNNNYLILR 61

Query: 280 EYLVPSRISKFTI 318
            Y   ++  +F +
Sbjct: 62  HYSRSNKKERFAL 74



 Score = 32.0 bits (71), Expect(3) = 9e-07
 Identities = 26/108 (24%), Positives = 52/108 (48%), Gaps = 6/108 (5%)
 Frame = +1

Query: 535 GFVPSTNVHKVVAFVFGWSSN----VKPLSLLIYQLGD*SWRMKPDDITCSGCSFP--NL 696
           GF   TN +KV+  V+ +S+N    + P  + I++L   +WR+       +  S P  ++
Sbjct: 152 GFDSRTNDYKVIRIVY-YSTNDDSLMVPPEVEIFELSRGTWRIN------NSASVPAYDV 204

Query: 697 RSNCPVVSVDGAAYWIDYYPSQKTSKEDTHLFSFEFKLEKFRFWELPD 840
                 + ++GA +W+ YY     S  +  +  +    E+F+ + +PD
Sbjct: 205 SKYSSQIVLEGAIHWVGYY-----SPRELTIAVYVVHDEEFKEFRMPD 247



 Score = 29.3 bits (64), Expect(3) = 9e-07
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +2

Query: 377 IAGNCNGLLLLKTLYQNRFNQCKLVNPSTRKSIDLPM 487
           I G+CNG++ L   + +   +  L NPS   S+ LP+
Sbjct: 101 IVGSCNGIICLTDNHSHILKRIVLWNPSIGLSVTLPL 137


>gb|EOY27068.1| F-box family protein [Theobroma cacao]
          Length = 352

 Score = 45.8 bits (107), Expect(2) = 8e-06
 Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
 Frame = +1

Query: 106 LSTLPMDMWQEMLSRMPVKTLLKLRCLWKTCKSIIDSSSFTSKHM-QVYNGRENLVLAME 282
           +S  P D+  ++L R+PVKTLL+ RC+ K   S+ID S F   H+ Q      N+ L ++
Sbjct: 1   MSPFPSDLITDILCRLPVKTLLRFRCVSKPWGSLIDDSDFVKLHLHQSLKTNTNVKLFLD 60

Query: 283 YLVPSRISKFTI 318
             V +    + +
Sbjct: 61  NCVENNSKAYAV 72



 Score = 32.7 bits (73), Expect(2) = 8e-06
 Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 9/71 (12%)
 Frame = +2

Query: 308 NSQFRGENFNEVAQLFEIPEPCV---------IAGNCNGLLLLKTLYQNRFNQCKLVNPS 460
           NS+    +F+ +  L + P P           I G+CNGLL +     +R     L NPS
Sbjct: 66  NSKAYAVDFDSLCNLVQFPRPFTAEANKYQSRIFGSCNGLLAV----YHRQKGIALWNPS 121

Query: 461 TRKSIDLPMLT 493
           TRK   LP L+
Sbjct: 122 TRKCHYLPTLS 132


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