BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00018777
         (765 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]    98   6e-42
gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidop...    93   4e-40
gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arab...    90   1e-38
emb|CAN74847.1| hypothetical protein VITISV_028741 [Vitis vinifera]   102   2e-38
emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]   100   2e-38
emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]    89   3e-38
emb|CAN82105.1| hypothetical protein VITISV_002577 [Vitis vinifera]    94   8e-38
emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]    97   2e-37
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi...    89   2e-36
dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis t...    97   3e-36
emb|CAN69804.1| hypothetical protein VITISV_017631 [Vitis vinifera]   100   7e-36
gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi...    93   9e-36
emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera]    97   4e-35
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t...    93   7e-35
dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis t...    80   9e-32
emb|CAN65229.1| hypothetical protein VITISV_011708 [Vitis vinifera]    76   9e-31
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi...    95   1e-30
gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsi...    94   7e-28
emb|CAN76645.1| hypothetical protein VITISV_004685 [Vitis vinifera]   101   1e-27
dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis t...    81   1e-26

>emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]
          Length = 1450

 Score = 98.2 bits (243), Expect(3) = 6e-42
 Identities = 47/103 (45%), Positives = 69/103 (66%)
 Frame = +3

Query: 456 SMKVVSMLHGAVSSSNKSQTCDLDCRICFMGKQPRNSFSISMNKASEIFDLIHCDIWGPI 635
           S KVV +L      SN   + +  C ICF  K PR+ F ++ NKA+ IF+ IHCD+WG  
Sbjct: 524 SEKVVKLLPPV---SNLKGSLNKACEICFRAKHPRDKFPLTDNKATRIFEKIHCDLWGSY 580

Query: 636 QILSSSNSRFFLTIVDDCSRATWVFLMLTKSEVGQLFRNFYAM 764
           + +SS  +R+FLTI+DD SRA W++L++ K+EV ++F +F AM
Sbjct: 581 KHVSSCAARYFLTIIDDFSRAVWIYLLVNKTEVFRMFMSFIAM 623



 Score = 80.9 bits (198), Expect(3) = 6e-42
 Identities = 45/112 (40%), Positives = 63/112 (56%), Gaps = 1/112 (0%)
 Frame = +1

Query: 136 NGKNTTATKEGKIRLSDNLFLENVLFVPALTCNXXXXXXXXXXXXXXXXFSNKFCIIQDH 315
           NG++  AT+ G +RLS+N+ L+NVL+V  L CN                F++  C IQDH
Sbjct: 417 NGESVVATQSGSVRLSNNITLKNVLYVSKLNCNLLSVSQLTDDLHCIVQFNSYMCAIQDH 476

Query: 316 TLRNLIGAGTLCDGVYIFKPVRVRSLQANKVGISDASM-LWHKRLGHPP*KL 468
           T R LIG G   DG+Y F      S+Q   V  + +++ LWHKR+GHP  K+
Sbjct: 477 T-RELIGTGVRRDGLYYFGGAEGDSVQHVSVHNAASTLELWHKRMGHPSEKV 527



 Score = 39.7 bits (91), Expect(3) = 6e-42
 Identities = 16/43 (37%), Positives = 30/43 (69%)
 Frame = +3

Query: 6   SEKLAGMYDSNAWIIDSGASNHTSGNLALFYDCHDI*SSPVGL 134
           +++L G +D+ +WIID+GA++H +G+L+  +D   +    VGL
Sbjct: 373 NDRLNGKFDTKSWIIDTGATHHVTGDLSWLFDTIALFECLVGL 415


>gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidopsis thaliana]
          Length = 1152

 Score = 92.8 bits (229), Expect(3) = 4e-40
 Identities = 48/101 (47%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
 Frame = +3

Query: 474 MLHGAVSSSNKSQTCDLD----CRICFMGKQPRNSFSISMNKASEIFDLIHCDIWGPIQI 641
           +L   + S     +C  D    C +C   KQ R SFS S NKA E F  IH D+WGP + 
Sbjct: 525 VLSSVLPSLEDFDSCSSDLKTICDVCVRAKQTRASFSESFNKAEECFSFIHYDVWGPYKH 584

Query: 642 LSSSNSRFFLTIVDDCSRATWVFLMLTKSEVGQLFRNFYAM 764
            SS  + +FLTIVDD SRA W+ LML KSEV  L + F AM
Sbjct: 585 ASSCGAHYFLTIVDDHSRAVWIHLMLAKSEVASLLQQFIAM 625



 Score = 82.0 bits (201), Expect(3) = 4e-40
 Identities = 45/111 (40%), Positives = 59/111 (53%)
 Frame = +1

Query: 136 NGKNTTATKEGKIRLSDNLFLENVLFVPALTCNXXXXXXXXXXXXXXXXFSNKFCIIQDH 315
           N K+T ATK+G + L  N+ L +VLFVP L+C                 F++K C+IQD 
Sbjct: 415 NAKHTIATKKGTLILGANMKLTHVLFVPDLSCTLISVARLLRELHCFAIFTDKVCVIQDR 474

Query: 316 TLRNLIGAGTLCDGVYIFKPVRVRSLQANKVGISDASMLWHKRLGHPP*KL 468
           T + LIG GT  +GVY  +   V +  AN V       LWH RLGHP  K+
Sbjct: 475 TSKMLIGVGTESNGVYHLQRAEVVATSANVVKWKTNKALWHMRLGHPSSKV 525



 Score = 37.7 bits (86), Expect(3) = 4e-40
 Identities = 22/49 (44%), Positives = 31/49 (63%)
 Frame = +3

Query: 3   SSEKLAGMYDSNAWIIDSGASNHTSGNLALFYDCHDI*SSPVGLQWKKH 149
           SSEKL+G  +   ++IDSGAS+H +G L L  + ++I  S V L   KH
Sbjct: 370 SSEKLSGKTNCVDFLIDSGASHHMTGFLDLLTEIYEIPHSVVVLPNAKH 418


>gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arabidopsis thaliana]
          Length = 1486

 Score = 90.1 bits (222), Expect(3) = 1e-38
 Identities = 42/91 (46%), Positives = 60/91 (65%)
 Frame = +3

Query: 492 SSSNKSQTCDLDCRICFMGKQPRNSFSISMNKASEIFDLIHCDIWGPIQILSSSNSRFFL 671
           SS+  S+TC+    IC   KQ R+ F +S NK S  F+L+HCD+WGP +  S   SR+FL
Sbjct: 529 SSTFDSKTCE----ICIQAKQTRDPFPLSSNKTSFAFELVHCDLWGPYRTTSICGSRYFL 584

Query: 672 TIVDDCSRATWVFLMLTKSEVGQLFRNFYAM 764
           T+VDD SRA W++L+ +K E  +  +NF A+
Sbjct: 585 TLVDDYSRAVWLYLLPSKQEAPKHLKNFIAL 615



 Score = 80.9 bits (198), Expect(3) = 1e-38
 Identities = 44/115 (38%), Positives = 65/115 (56%), Gaps = 2/115 (1%)
 Frame = +1

Query: 118 PPLLVY--NGKNTTATKEGKIRLSDNLFLENVLFVPALTCNXXXXXXXXXXXXXXXXFSN 291
           PP+L+   +G+ TTATK+G ++L  +L L++VLFV  L C+                 ++
Sbjct: 402 PPVLIKLPDGRFTTATKQGSVQLGSSLDLQDVLFVDGLHCHLISVSQLTRTRRCIFQITD 461

Query: 292 KFCIIQDHTLRNLIGAGTLCDGVYIFKPVRVRSLQANKVGISDASMLWHKRLGHP 456
           K CI+QD T   LIGAG   +G+Y F+ V   +   +K     +S LWH+RLGHP
Sbjct: 462 KVCIVQDRTTLMLIGAGRELNGLYFFRGVETAAAVTSKA--LPSSQLWHQRLGHP 514



 Score = 37.0 bits (84), Expect(3) = 1e-38
 Identities = 16/37 (43%), Positives = 25/37 (67%)
 Frame = +3

Query: 3   SSEKLAGMYDSNAWIIDSGASNHTSGNLALFYDCHDI 113
           S++  +G Y   +WIIDSGA+NH +G+LA   +  D+
Sbjct: 365 SNDHQSGKYFLESWIIDSGATNHMTGSLAFLRNVCDM 401


>emb|CAN74847.1| hypothetical protein VITISV_028741 [Vitis vinifera]
          Length = 1262

 Score =  102 bits (253), Expect(2) = 2e-38
 Identities = 50/103 (48%), Positives = 70/103 (67%)
 Frame = +3

Query: 456 SMKVVSMLHGAVSSSNKSQTCDLDCRICFMGKQPRNSFSISMNKASEIFDLIHCDIWGPI 635
           S KVV +L      SN   + +  C ICF  K PR+ FS+S NKA+ IF+ IHCD+WG  
Sbjct: 523 SEKVVKLLPPV---SNLKGSLNKACEICFRAKHPRDKFSLSDNKATRIFEKIHCDLWGSY 579

Query: 636 QILSSSNSRFFLTIVDDCSRATWVFLMLTKSEVGQLFRNFYAM 764
           + +SS  +R+FLTIVDD SRA W++L++ K+EV ++F +F AM
Sbjct: 580 KHVSSCGARYFLTIVDDFSRAVWIYLLVDKTEVFRMFMSFIAM 622



 Score = 84.3 bits (207), Expect(2) = 2e-38
 Identities = 47/126 (37%), Positives = 71/126 (56%), Gaps = 1/126 (0%)
 Frame = +1

Query: 94  FMIVMISDPPLLVYNGKNTTATKEGKIRLSDNLFLENVLFVPALTCNXXXXXXXXXXXXX 273
           F  + + + P+ + NG++  AT+ G +RLS+N+ L+NVL+VP L CN             
Sbjct: 402 FDTIALFECPVGLPNGESIVATQSGSVRLSNNITLKNVLYVPKLNCNLLSVSQLTDDLHC 461

Query: 274 XXXFSNKFCIIQDHTLRNLIGAGTLCDGVYIFKPVRVRSLQANKVGISDASM-LWHKRLG 450
              F++  C IQDHT R LIG G   DG+Y F      S++   V  + +++ LWHKR+G
Sbjct: 462 IVQFNSYMCAIQDHT-RELIGTGVRRDGLYYFGGAEGDSVEHVSVHNAASTLELWHKRMG 520

Query: 451 HPP*KL 468
           HP  K+
Sbjct: 521 HPSEKV 526


>emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]
          Length = 1099

 Score =  100 bits (248), Expect(2) = 2e-38
 Identities = 49/103 (47%), Positives = 69/103 (66%)
 Frame = +3

Query: 456 SMKVVSMLHGAVSSSNKSQTCDLDCRICFMGKQPRNSFSISMNKASEIFDLIHCDIWGPI 635
           S KVV +L      SN   + +  C ICF  K PR+ F +S NKA+ IF+ IHCD+WG  
Sbjct: 191 SEKVVKLLPPV---SNLKGSLNKACEICFRAKHPRDKFPLSDNKATRIFEKIHCDLWGSY 247

Query: 636 QILSSSNSRFFLTIVDDCSRATWVFLMLTKSEVGQLFRNFYAM 764
           + +SS  +R+FLTIVDD SRA W++L++ K+EV ++F +F AM
Sbjct: 248 KHVSSCGARYFLTIVDDFSRAVWIYLLVDKTEVFRMFMSFIAM 290



 Score = 86.3 bits (212), Expect(2) = 2e-38
 Identities = 48/126 (38%), Positives = 71/126 (56%), Gaps = 1/126 (0%)
 Frame = +1

Query: 94  FMIVMISDPPLLVYNGKNTTATKEGKIRLSDNLFLENVLFVPALTCNXXXXXXXXXXXXX 273
           F  + + + P+ + NG++  AT+ G +RLS+N+ L+NVL+VP L CN             
Sbjct: 70  FDTIALFECPVGLPNGESVVATQSGSVRLSNNITLQNVLYVPKLNCNLLSVSQLTDDLHC 129

Query: 274 XXXFSNKFCIIQDHTLRNLIGAGTLCDGVYIFKPVRVRSLQANKVGISDASM-LWHKRLG 450
              F++  C IQDHT R LIG G   DG+Y F      S+Q   V  + +++ LWHKR+G
Sbjct: 130 IVQFNSYMCAIQDHT-RELIGTGVRRDGLYYFGGAEGDSVQHVSVHNAASTLELWHKRMG 188

Query: 451 HPP*KL 468
           HP  K+
Sbjct: 189 HPSEKV 194


>emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]
          Length = 1316

 Score = 89.4 bits (220), Expect(3) = 3e-38
 Identities = 46/103 (44%), Positives = 64/103 (62%)
 Frame = +3

Query: 456 SMKVVSMLHGAVSSSNKSQTCDLDCRICFMGKQPRNSFSISMNKASEIFDLIHCDIWGPI 635
           S +V++ +H   ++  K    D  C  C  GKQ RNSF +S  +A EIF+LIH DIWGP 
Sbjct: 397 SDRVLASIHSLGNNVMKGIE-DYVCDSCCRGKQVRNSFQLSNKRAFEIFNLIHVDIWGPY 455

Query: 636 QILSSSNSRFFLTIVDDCSRATWVFLMLTKSEVGQLFRNFYAM 764
           +  ++S + +FLTIVDD SR  W++LM  KSE   + +NF  M
Sbjct: 456 RTPTTSGAHYFLTIVDDHSRGVWIYLMKEKSETKDILQNFCFM 498



 Score = 88.6 bits (218), Expect(3) = 3e-38
 Identities = 44/107 (41%), Positives = 63/107 (58%)
 Frame = +1

Query: 136 NGKNTTATKEGKIRLSDNLFLENVLFVPALTCNXXXXXXXXXXXXXXXXFSNKFCIIQDH 315
           +G  T A + G ++LS +L L+NVL+VP+L CN                F++ FC+IQD 
Sbjct: 292 DGTKTVANEMGYVKLSKDLCLKNVLYVPSLKCNLISIGQLLKEKDYIVTFTDSFCVIQDR 351

Query: 316 TLRNLIGAGTLCDGVYIFKPVRVRSLQANKVGISDASMLWHKRLGHP 456
           T RN IG G L +GVY +KP  ++  + N V + +   LWH+RLGHP
Sbjct: 352 TSRNPIGVGKLRNGVYYYKP--LQGEKVNAVKVEEKYELWHRRLGHP 396



 Score = 28.5 bits (62), Expect(3) = 3e-38
 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = +3

Query: 3   SSEKLAGMYDS-NAWIIDSGASNHTSGNLALF 95
           ++EKL G       WI+DSGAS H +G   LF
Sbjct: 246 NAEKLTGKNKIVEEWILDSGASMHMTGRRDLF 277


>emb|CAN82105.1| hypothetical protein VITISV_002577 [Vitis vinifera]
          Length = 1109

 Score = 93.6 bits (231), Expect(3) = 8e-38
 Identities = 45/103 (43%), Positives = 61/103 (59%)
 Frame = +3

Query: 456 SMKVVSMLHGAVSSSNKSQTCDLDCRICFMGKQPRNSFSISMNKASEIFDLIHCDIWGPI 635
           S +VV ++    S        +  C ICF  +Q R  F  S NKA E FDLIHCD+WG  
Sbjct: 332 SSRVVDLIXEVDSVGRNDGXKNKFCDICFRAQQTREMFFSSDNKAKECFDLIHCDLWGAY 391

Query: 636 QILSSSNSRFFLTIVDDCSRATWVFLMLTKSEVGQLFRNFYAM 764
           ++ +S    +FLTIVDDCSRA W++L+  K+EV  + +NF  M
Sbjct: 392 RVPASCGGIYFLTIVDDCSRAVWIYLLNRKNEVACVLKNFIVM 434



 Score = 78.6 bits (192), Expect(3) = 8e-38
 Identities = 43/107 (40%), Positives = 54/107 (50%)
 Frame = +1

Query: 136 NGKNTTATKEGKIRLSDNLFLENVLFVPALTCNXXXXXXXXXXXXXXXXFSNKFCIIQDH 315
           NG  T A KE  + L + L L +VLFVP L CN                F+NK C IQD 
Sbjct: 227 NGAETKALKERTVTLGEKLKLRHVLFVPKLKCNLIFVLQLLDDSNLVVQFTNKICAIQDR 286

Query: 316 TLRNLIGAGTLCDGVYIFKPVRVRSLQANKVGISDASMLWHKRLGHP 456
             R LIG G  C+G+Y  K   V  ++A K     +  LWH+R+GHP
Sbjct: 287 ISRMLIGVGEQCEGLYFLK--GVAPIRAYKTTSIASYELWHRRMGHP 331



 Score = 32.7 bits (73), Expect(3) = 8e-38
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = +3

Query: 3   SSEKLAGMYDSNAWIIDSGASNHTSGNLALFYDCHDI*SSPVGL 134
           +++ L G  +   WIID+GA +H +G      D  DI    VGL
Sbjct: 182 ANZMLTGKQNILPWIIDTGAXHHMTGTYECLNDLRDIMPCLVGL 225


>emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]
          Length = 1178

 Score = 97.1 bits (240), Expect(2) = 2e-37
 Identities = 48/103 (46%), Positives = 68/103 (66%)
 Frame = +3

Query: 456 SMKVVSMLHGAVSSSNKSQTCDLDCRICFMGKQPRNSFSISMNKASEIFDLIHCDIWGPI 635
           S KVV +L      SN   + +  C ICF  K  R+ F +S NKA+ IF+ IHCD+WG  
Sbjct: 277 SEKVVKLLPPV---SNLKGSLNKACEICFRAKHXRDKFPLSDNKATRIFEKIHCDLWGSY 333

Query: 636 QILSSSNSRFFLTIVDDCSRATWVFLMLTKSEVGQLFRNFYAM 764
           + +SS  +R+FLTIVDD SRA W++L++ K+EV ++F +F AM
Sbjct: 334 KHVSSCGARYFLTIVDDFSRAVWIYLLVDKTEVFRMFMSFIAM 376



 Score = 86.3 bits (212), Expect(2) = 2e-37
 Identities = 48/126 (38%), Positives = 71/126 (56%), Gaps = 1/126 (0%)
 Frame = +1

Query: 94  FMIVMISDPPLLVYNGKNTTATKEGKIRLSDNLFLENVLFVPALTCNXXXXXXXXXXXXX 273
           F  + + + P+ + NG++  AT+ G +RLS+N+ L+NVL+VP L CN             
Sbjct: 156 FDTIALFECPVGLPNGESVVATQSGSVRLSNNITLQNVLYVPKLNCNLLSVSQLTDDLHC 215

Query: 274 XXXFSNKFCIIQDHTLRNLIGAGTLCDGVYIFKPVRVRSLQANKVGISDASM-LWHKRLG 450
              F++  C IQDHT R LIG G   DG+Y F      S+Q   V  + +++ LWHKR+G
Sbjct: 216 IVQFNSYMCAIQDHT-RELIGTGVRRDGLYYFGGAEGDSVQHVSVHNAASTLELWHKRMG 274

Query: 451 HPP*KL 468
           HP  K+
Sbjct: 275 HPSEKV 280


>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1496

 Score = 89.4 bits (220), Expect(3) = 2e-36
 Identities = 41/79 (51%), Positives = 53/79 (67%)
 Frame = +3

Query: 528 CRICFMGKQPRNSFSISMNKASEIFDLIHCDIWGPIQILSSSNSRFFLTIVDDCSRATWV 707
           C  CF  KQ R  F IS NK  E F LIH D+WGP +  S++ + +FLT+VDD SR+ W 
Sbjct: 533 CDTCFRSKQTREVFPISNNKTMECFSLIHGDVWGPYRTPSTTGAVYFLTLVDDYSRSVWT 592

Query: 708 FLMLTKSEVGQLFRNFYAM 764
           +LM +K+EV QL +NF AM
Sbjct: 593 YLMSSKTEVSQLIKNFCAM 611



 Score = 74.3 bits (181), Expect(3) = 2e-36
 Identities = 42/116 (36%), Positives = 57/116 (49%)
 Frame = +1

Query: 109 ISDPPLLVYNGKNTTATKEGKIRLSDNLFLENVLFVPALTCNXXXXXXXXXXXXXXXXFS 288
           I+  P+   +GK + ATK G + L D+  L +VLFVP   C                 F+
Sbjct: 394 ITPSPVTKPDGKASQATKCGTLLLHDSYKLHDVLFVPDFDCTLISVSKLLKQTSSIAIFT 453

Query: 289 NKFCIIQDHTLRNLIGAGTLCDGVYIFKPVRVRSLQANKVGISDASMLWHKRLGHP 456
           + FC +QD  LR LIGAG   +GVY F  V    +       + +  LWH+RLGHP
Sbjct: 454 DTFCFLQDRFLRTLIGAGEEREGVYYFTGVLAPRVHKASSDFAISGDLWHRRLGHP 509



 Score = 36.2 bits (82), Expect(3) = 2e-36
 Identities = 18/42 (42%), Positives = 27/42 (64%)
 Frame = +3

Query: 3   SSEKLAGMYDSNAWIIDSGASNHTSGNLALFYDCHDI*SSPV 128
           SSE+L+G       +ID+GAS+H +G+ ++  D  DI  SPV
Sbjct: 358 SSERLSGNTCLTDGVIDTGASHHMTGDCSILVDVFDITPSPV 399


>dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1098

 Score = 97.4 bits (241), Expect(3) = 3e-36
 Identities = 48/90 (53%), Positives = 60/90 (66%), Gaps = 4/90 (4%)
 Frame = +3

Query: 507 SQTCDLD----CRICFMGKQPRNSFSISMNKASEIFDLIHCDIWGPIQILSSSNSRFFLT 674
           S + DL+    C IC+  KQ R  FS S+NK +  F+LIHCD+WGP +  +S  S +FLT
Sbjct: 525 SSSSDLEIIKSCDICYRAKQAREVFSPSLNKTTVCFELIHCDVWGPYRTPASCGSVYFLT 584

Query: 675 IVDDCSRATWVFLMLTKSEVGQLFRNFYAM 764
           IVDD SR+ W FLM  KSEV +L RNF AM
Sbjct: 585 IVDDFSRSVWTFLMAEKSEVSRLIRNFCAM 614



 Score = 64.7 bits (156), Expect(3) = 3e-36
 Identities = 40/113 (35%), Positives = 54/113 (47%), Gaps = 1/113 (0%)
 Frame = +1

Query: 121 PLLVYNGKNTTATKEGKIRLSDNLFLENVLFVPALTCNXXXXXXXXXXXXXXXXFSNKFC 300
           P+   +G  + ATK G + L +   L +VLFVP   C                 F++  C
Sbjct: 402 PVTKPDGTASRATKRGTLALHNAYVLPDVLFVPDFNCTLISVAKLLKHTGCVAIFTDTLC 461

Query: 301 IIQDHTLRNLIGAGTLCDGVYIFKPVRVRSLQANK-VGISDASMLWHKRLGHP 456
            +QD   R LIGAG   +GVY F    V + + NK    S ++ LWH RLGHP
Sbjct: 462 FLQDRFTRTLIGAGEEREGVYYF--TGVLAARVNKGFKESSSATLWHHRLGHP 512



 Score = 37.4 bits (85), Expect(3) = 3e-36
 Identities = 19/42 (45%), Positives = 28/42 (66%)
 Frame = +3

Query: 3   SSEKLAGMYDSNAWIIDSGASNHTSGNLALFYDCHDI*SSPV 128
           SS+KL+G   +   IID+GAS+H +G++ L  +  DI  SPV
Sbjct: 362 SSQKLSGKTFTTYVIIDTGASHHMTGDITLLTNVEDIIPSPV 403


>emb|CAN69804.1| hypothetical protein VITISV_017631 [Vitis vinifera]
          Length = 1191

 Score =  100 bits (249), Expect(2) = 7e-36
 Identities = 49/107 (45%), Positives = 71/107 (66%)
 Frame = +3

Query: 444 IRSSSMKVVSMLHGAVSSSNKSQTCDLDCRICFMGKQPRNSFSISMNKASEIFDLIHCDI 623
           +R  S KVV +L      SN   + +  C ICF  K PR+ F +S NKA+ IF+ IHCD+
Sbjct: 232 MRHPSEKVVKLLPPV---SNLKGSLNKACEICFRAKHPRDKFPLSDNKATRIFEKIHCDL 288

Query: 624 WGPIQILSSSNSRFFLTIVDDCSRATWVFLMLTKSEVGQLFRNFYAM 764
           WG  + +SS  +R+FLTIVDD SRA W++L++ K++V ++F +F AM
Sbjct: 289 WGSYKHVSSCGARYFLTIVDDFSRAVWIYLLVDKTDVFRMFMSFIAM 335



 Score = 77.4 bits (189), Expect(2) = 7e-36
 Identities = 45/126 (35%), Positives = 68/126 (53%), Gaps = 1/126 (0%)
 Frame = +1

Query: 94  FMIVMISDPPLLVYNGKNTTATKEGKIRLSDNLFLENVLFVPALTCNXXXXXXXXXXXXX 273
           F  + + + P+ + NG++  AT+   +RLS+N+ L+NVL+VP L CN             
Sbjct: 115 FDTIALFECPVGLPNGESVVATQSSSVRLSNNITLKNVLYVPKLNCNLLSVSQLTDDLHC 174

Query: 274 XXXFSNKFCIIQDHTLRNLIGAGTLCDGVYIFKPVRVRSLQANKVGISDASM-LWHKRLG 450
              F++  C IQDHT R LI  G   DG+Y F      S+Q   V  + +++ LWHKR+ 
Sbjct: 175 IVQFNSYMCAIQDHT-RELIRTGVRRDGLYYFGGAEGDSVQHVSVHNAASTLELWHKRMR 233

Query: 451 HPP*KL 468
           HP  K+
Sbjct: 234 HPSEKV 239


>gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1413

 Score = 92.8 bits (229), Expect(3) = 9e-36
 Identities = 45/95 (47%), Positives = 60/95 (63%)
 Frame = +3

Query: 477 LHGAVSSSNKSQTCDLDCRICFMGKQPRNSFSISMNKASEIFDLIHCDIWGPIQILSSSN 656
           L    S S  S++CD    +CF  KQ R  F  S NK+++ F LIHCD+WGP ++ SS  
Sbjct: 530 LFSGSSCSVSSRSCD----VCFRAKQTREVFPDSSNKSTDCFSLIHCDVWGPYRVPSSCG 585

Query: 657 SRFFLTIVDDCSRATWVFLMLTKSEVGQLFRNFYA 761
           + +FLTIVDD SR+ W +L+L KSEV  +  NF A
Sbjct: 586 AVYFLTIVDDFSRSVWTYLLLAKSEVRSVLTNFLA 620



 Score = 73.6 bits (179), Expect(3) = 9e-36
 Identities = 39/107 (36%), Positives = 55/107 (51%)
 Frame = +1

Query: 136 NGKNTTATKEGKIRLSDNLFLENVLFVPALTCNXXXXXXXXXXXXXXXXFSNKFCIIQDH 315
           +G+ T A   G  +LS+ + L NVL+VPAL C+                F++  C++QD 
Sbjct: 416 DGRKTFAISMGTFKLSETVSLSNVLYVPALNCSLISVSKLVKQIKCLALFTDTICVLQDR 475

Query: 316 TLRNLIGAGTLCDGVYIFKPVRVRSLQANKVGISDASMLWHKRLGHP 456
             R LIG G   DGVY        ++  +KV I+    LWH+RLGHP
Sbjct: 476 FSRTLIGTGEERDGVYYLTDAATTTV--HKVDITTDHALWHQRLGHP 520



 Score = 31.6 bits (70), Expect(3) = 9e-36
 Identities = 17/43 (39%), Positives = 26/43 (60%)
 Frame = +3

Query: 3   SSEKLAGMYDSNAWIIDSGASNHTSGNLALFYDCHDI*SSPVG 131
           +S+KL+G       I+D+GAS+H +G L+L  +   I S  VG
Sbjct: 371 TSDKLSGKMKLGDVILDTGASHHMTGQLSLLTNIVTIPSCSVG 413


>emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera]
          Length = 1129

 Score = 96.7 bits (239), Expect(2) = 4e-35
 Identities = 45/102 (44%), Positives = 68/102 (66%)
 Frame = +3

Query: 459 MKVVSMLHGAVSSSNKSQTCDLDCRICFMGKQPRNSFSISMNKASEIFDLIHCDIWGPIQ 638
           +K++ ++     S NK+      C ICF  K PR+ F +S NKA+ IF+ IHCD+W   +
Sbjct: 276 VKLLPLVSNIKGSLNKA------CEICFRAKHPRDKFPLSDNKATRIFEKIHCDLWASYK 329

Query: 639 ILSSSNSRFFLTIVDDCSRATWVFLMLTKSEVGQLFRNFYAM 764
            +SS  +R+FLTIVDD SRA W++L++ K+EV ++F +F AM
Sbjct: 330 HVSSCGARYFLTIVDDFSRAVWIYLLVDKTEVFRMFMSFIAM 371



 Score = 78.6 bits (192), Expect(2) = 4e-35
 Identities = 45/126 (35%), Positives = 68/126 (53%), Gaps = 1/126 (0%)
 Frame = +1

Query: 94  FMIVMISDPPLLVYNGKNTTATKEGKIRLSDNLFLENVLFVPALTCNXXXXXXXXXXXXX 273
           F  + + + P+ + NG++  AT+ G +RL +N+ L+NVL+V  L CN             
Sbjct: 151 FDTIALFECPVGLPNGESVVATQSGSVRLLNNITLKNVLYVSKLNCNLLSVSQLTDDLHC 210

Query: 274 XXXFSNKFCIIQDHTLRNLIGAGTLCDGVYIFKPVRVRSLQANKVGISDASM-LWHKRLG 450
              F++  C IQDHT R LIG G   DG+Y F      S+Q   V  + +++ LWH R+G
Sbjct: 211 IVQFNSYMCAIQDHT-RELIGTGVRRDGLYYFGGAEGDSVQHVSVHNAASTLELWHNRMG 269

Query: 451 HPP*KL 468
           HP  K+
Sbjct: 270 HPSEKV 275


>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1491

 Score = 92.8 bits (229), Expect(3) = 7e-35
 Identities = 45/95 (47%), Positives = 60/95 (63%)
 Frame = +3

Query: 477 LHGAVSSSNKSQTCDLDCRICFMGKQPRNSFSISMNKASEIFDLIHCDIWGPIQILSSSN 656
           L    S S  S++CD    +CF  KQ R  F  S NK+++ F LIHCD+WGP ++ SS  
Sbjct: 530 LFSGSSCSVSSRSCD----VCFRAKQTREVFPDSSNKSTDCFSLIHCDVWGPYRVPSSCG 585

Query: 657 SRFFLTIVDDCSRATWVFLMLTKSEVGQLFRNFYA 761
           + +FLTIVDD SR+ W +L+L KSEV  +  NF A
Sbjct: 586 AVYFLTIVDDFSRSVWTYLLLAKSEVRSVLTNFLA 620



 Score = 70.5 bits (171), Expect(3) = 7e-35
 Identities = 37/105 (35%), Positives = 53/105 (50%)
 Frame = +1

Query: 142 KNTTATKEGKIRLSDNLFLENVLFVPALTCNXXXXXXXXXXXXXXXXFSNKFCIIQDHTL 321
           + T A   G  +LS+ + L NVL+VPAL C+                F++  C++QD   
Sbjct: 418 RKTFAISMGTFKLSETVSLSNVLYVPALNCSLISVSKLVKQIKCLALFTDTICVLQDRFS 477

Query: 322 RNLIGAGTLCDGVYIFKPVRVRSLQANKVGISDASMLWHKRLGHP 456
           R LIG G   DGVY        ++  +KV ++    LWH+RLGHP
Sbjct: 478 RTLIGTGEERDGVYYLTDAATTTV--HKVDVTTDHALWHQRLGHP 520



 Score = 31.6 bits (70), Expect(3) = 7e-35
 Identities = 17/43 (39%), Positives = 26/43 (60%)
 Frame = +3

Query: 3   SSEKLAGMYDSNAWIIDSGASNHTSGNLALFYDCHDI*SSPVG 131
           +S+KL+G       I+D+GAS+H +G L+L  +   I S  VG
Sbjct: 371 TSDKLSGKMKLGDVILDTGASHHMTGQLSLLTNIVTIPSCSVG 413


>dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1462

 Score = 80.1 bits (196), Expect(3) = 9e-32
 Identities = 39/105 (37%), Positives = 64/105 (60%), Gaps = 2/105 (1%)
 Frame = +3

Query: 456 SMKVVSMLHGAVSSSNK--SQTCDLDCRICFMGKQPRNSFSISMNKASEIFDLIHCDIWG 629
           S KV+ +L  + S+ +   S+TC+    IC   KQ R+ F +S NK S  F+++HCD+WG
Sbjct: 479 SSKVLKLLSFSDSTGHAFDSKTCE----ICIKAKQTRDPFPLSNNKTSSPFEMVHCDLWG 534

Query: 630 PIQILSSSNSRFFLTIVDDCSRATWVFLMLTKSEVGQLFRNFYAM 764
           P +  S   S +FLT+VD+ +RA W++L+ +K       +NF ++
Sbjct: 535 PYRTTSICGSNYFLTLVDNYTRAVWLYLLPSKQTAPMHLKNFISL 579



 Score = 72.4 bits (176), Expect(3) = 9e-32
 Identities = 42/121 (34%), Positives = 62/121 (51%), Gaps = 2/121 (1%)
 Frame = +1

Query: 118 PPLLVY--NGKNTTATKEGKIRLSDNLFLENVLFVPALTCNXXXXXXXXXXXXXXXXFSN 291
           PP+++   +G+ TT+TK G++ L  +L L+ V FV  L C+                 ++
Sbjct: 367 PPIMIKLPDGRLTTSTKHGRVYLGSSLDLQEVFFVDGLHCHLISVSQLTRAKSCVFQITD 426

Query: 292 KFCIIQDHTLRNLIGAGTLCDGVYIFKPVRVRSLQANKVGISDASMLWHKRLGHPP*KLF 471
           K CIIQD     LIGAG   +G+Y F   R     A+   +  +S LWH RLGHP  K+ 
Sbjct: 427 KVCIIQDRITLTLIGAGKQQNGLYFF---RGTETVASMTRMDSSSQLWHCRLGHPSSKVL 483

Query: 472 Q 474
           +
Sbjct: 484 K 484



 Score = 32.0 bits (71), Expect(3) = 9e-32
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = +3

Query: 39  AWIIDSGASNHTSGNLALFYDCHDI 113
           +WIIDSGA+NH +G L    D  D+
Sbjct: 342 SWIIDSGATNHMTGTLEFLRDVCDM 366


>emb|CAN65229.1| hypothetical protein VITISV_011708 [Vitis vinifera]
          Length = 1149

 Score = 75.9 bits (185), Expect(3) = 9e-31
 Identities = 42/104 (40%), Positives = 59/104 (56%), Gaps = 1/104 (0%)
 Frame = +3

Query: 456 SMKVVSMLHGAV-SSSNKSQTCDLDCRICFMGKQPRNSFSISMNKASEIFDLIHCDIWGP 632
           S KV+ ++   V ++ N+++ CD    +CF  KQ R  FS S NKA + FDLIH      
Sbjct: 445 SFKVLGLIPEVVCNNKNENKVCD----VCFXAKQTRKMFSSSENKAKKCFDLIHX----- 495

Query: 633 IQILSSSNSRFFLTIVDDCSRATWVFLMLTKSEVGQLFRNFYAM 764
                S  + +FLTI DDCSR  W++L+  K+EVG   + F AM
Sbjct: 496 -----SCGAXYFLTIXDDCSRVVWIYLLNGKNEVGXXLKKFMAM 534



 Score = 69.3 bits (168), Expect(3) = 9e-31
 Identities = 41/120 (34%), Positives = 61/120 (50%)
 Frame = +1

Query: 109 ISDPPLLVYNGKNTTATKEGKIRLSDNLFLENVLFVPALTCNXXXXXXXXXXXXXXXXFS 288
           I+  P+ + +G    A K+G + L   L L NVLFVP L CN                 +
Sbjct: 331 IAPCPVGLPDGVEIMALKKGIVCLGGELKLHNVLFVPKLKCNLISVSQLLRDSGLVIQLT 390

Query: 289 NKFCIIQDHTLRNLIGAGTLCDGVYIFKPVRVRSLQANKVGISDASMLWHKRLGHPP*KL 468
           +KFC+IQD + R +IGAG   +G+Y        S+ A K+    +  LWH+R+G+P  K+
Sbjct: 391 DKFCVIQDRSTRKVIGAGEQREGLYFLN--GAASVHAFKMNGVTSFELWHRRMGYPSFKV 448



 Score = 35.8 bits (81), Expect(3) = 9e-31
 Identities = 18/41 (43%), Positives = 21/41 (51%)
 Frame = +3

Query: 12  KLAGMYDSNAWIIDSGASNHTSGNLALFYDCHDI*SSPVGL 134
           +L G      WIIDSGASNH +       +  DI   PVGL
Sbjct: 298 RLMGKQSQLPWIIDSGASNHMTSVYTCMREVRDIAPCPVGL 338


>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1501

 Score = 94.7 bits (234), Expect(2) = 1e-30
 Identities = 46/93 (49%), Positives = 59/93 (63%)
 Frame = +3

Query: 477 LHGAVSSSNKSQTCDLDCRICFMGKQPRNSFSISMNKASEIFDLIHCDIWGPIQILSSSN 656
           L    SS+  S +CD    +CF  KQ R  F  S+NK  E F LIHCD+WGP ++ +S  
Sbjct: 547 LFSKTSSTVTSHSCD----VCFRAKQTREVFPESINKTEECFSLIHCDVWGPYRVPASCG 602

Query: 657 SRFFLTIVDDCSRATWVFLMLTKSEVGQLFRNF 755
           + +FLTIVDD SRA W +L+L KSEV Q+  NF
Sbjct: 603 AVYFLTIVDDYSRAVWTYLLLEKSEVRQVLTNF 635



 Score = 65.5 bits (158), Expect(2) = 1e-30
 Identities = 38/119 (31%), Positives = 54/119 (45%)
 Frame = +1

Query: 100 IVMISDPPLLVYNGKNTTATKEGKIRLSDNLFLENVLFVPALTCNXXXXXXXXXXXXXXX 279
           +V +   P+   +G    A   G + LS+ + L NVLFVP+L C                
Sbjct: 421 VVPVPPCPVGFADGSKAFALSVGVLTLSNTVSLTNVLFVPSLNCTLISVSKLLKQTQCLA 480

Query: 280 XFSNKFCIIQDHTLRNLIGAGTLCDGVYIFKPVRVRSLQANKVGISDASMLWHKRLGHP 456
            F++  C +QD + + LIG+G    GVY    V    +    V    A  LWH+RLGHP
Sbjct: 481 TFTDTLCFLQDRSSKTLIGSGEERGGVYYLTDVTPAKIHTANVDSDQA--LWHQRLGHP 537


>gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1333

 Score = 94.0 bits (232), Expect(2) = 7e-28
 Identities = 43/93 (46%), Positives = 64/93 (68%)
 Frame = +3

Query: 486 AVSSSNKSQTCDLDCRICFMGKQPRNSFSISMNKASEIFDLIHCDIWGPIQILSSSNSRF 665
           +VSS++ ++ CD    +C   KQ RNSF +S+NK   IF+LI+CD+WGP +  S + +R+
Sbjct: 413 SVSSTHLNKACD----VCHRAKQTRNSFPLSINKTLRIFELIYCDLWGPYRTPSHTGARY 468

Query: 666 FLTIVDDCSRATWVFLMLTKSEVGQLFRNFYAM 764
           FLTI+DD SR  W++L+  KSE     +NF+AM
Sbjct: 469 FLTIIDDYSRGVWLYLLNDKSEAPCHLKNFFAM 501



 Score = 57.0 bits (136), Expect(2) = 7e-28
 Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 3/117 (2%)
 Frame = +1

Query: 115 DPPLLVY-NGKNTTATKEGKIRLSDNLFLENVLFVPALTCNXXXXXXXXXXXXXXXXFSN 291
           DP L+V  +G+   + KEG +RL  NL + +V +V     +                 S+
Sbjct: 287 DPILIVLADGRERISVKEGTVRLGSNLVMISVFYVEEFQSDLISIGQLMDENRCVLQMSD 346

Query: 292 KFCIIQDHTLRNLIGAGTLCDGVYIFKPVRVRSLQANKVGISDAS--MLWHKRLGHP 456
           +F ++QD T R ++GAG    G + F+   +    A  V + +     LWH R+GHP
Sbjct: 347 RFLVVQDRTSRMVMGAGRRVGGTFHFRSTEI----AASVTVKEEKNYELWHSRMGHP 399


>emb|CAN76645.1| hypothetical protein VITISV_004685 [Vitis vinifera]
          Length = 1196

 Score =  101 bits (252), Expect(2) = 1e-27
 Identities = 50/103 (48%), Positives = 69/103 (66%)
 Frame = +3

Query: 456 SMKVVSMLHGAVSSSNKSQTCDLDCRICFMGKQPRNSFSISMNKASEIFDLIHCDIWGPI 635
           S KVV +L      SN   + +  C ICF  K PR+ F +S NKA+ IF+ IHCD+WG  
Sbjct: 404 SEKVVKLLPPV---SNLKGSLNKACEICFRAKHPRDKFPLSDNKATRIFEKIHCDLWGSY 460

Query: 636 QILSSSNSRFFLTIVDDCSRATWVFLMLTKSEVGQLFRNFYAM 764
           + +SS  +R+FLTIVDD SRA W++L++ K+EV Q+F +F AM
Sbjct: 461 KHVSSCGARYFLTIVDDFSRAVWIYLLVDKTEVFQMFMSFIAM 503



 Score = 48.5 bits (114), Expect(2) = 1e-27
 Identities = 36/126 (28%), Positives = 56/126 (44%), Gaps = 1/126 (0%)
 Frame = +1

Query: 94  FMIVMISDPPLLVYNGKNTTATKEGKIRLSDNLFLENVLFVPALTCNXXXXXXXXXXXXX 273
           F  + + + P+ + NG++  AT+ G +RLS+N+ L+N                       
Sbjct: 318 FDTIALFECPVGLLNGESVVATQSGSVRLSNNITLKNX---------------------- 355

Query: 274 XXXFSNKFCIIQDHTLRNLIGAGTLCDGVYIFKPVRVRSLQANKVGISDASM-LWHKRLG 450
                        HT R LIG G   DG+Y F      S+Q   V  + +++ LWHKR+G
Sbjct: 356 -------------HT-RELIGTGVRRDGLYYFDGAEGDSVQHVSVHNAASTLELWHKRMG 401

Query: 451 HPP*KL 468
           HP  K+
Sbjct: 402 HPSEKV 407


>dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1475

 Score = 80.9 bits (198), Expect(3) = 1e-26
 Identities = 40/97 (41%), Positives = 56/97 (57%)
 Frame = +3

Query: 474 MLHGAVSSSNKSQTCDLDCRICFMGKQPRNSFSISMNKASEIFDLIHCDIWGPIQILSSS 653
           +LH  +    +++   + C IC   KQ   SF    N +   FDLIH D WGP    ++ 
Sbjct: 600 VLHDVLGLPKRNKEDLVHCSICQKAKQKHLSFPSKNNMSENKFDLIHIDTWGPFATPTTE 659

Query: 654 NSRFFLTIVDDCSRATWVFLMLTKSEVGQLFRNFYAM 764
             ++FLTIVDD SRATWV+LM  K++V Q+F +F  M
Sbjct: 660 GYKYFLTIVDDYSRATWVYLMKAKNDVLQIFPDFLKM 696



 Score = 55.1 bits (131), Expect(3) = 1e-26
 Identities = 35/118 (29%), Positives = 48/118 (40%), Gaps = 12/118 (10%)
 Frame = +1

Query: 139 GKNTTATKEGKIRLSDNLFLENVLFVPALTCNXXXXXXXXXXXXXXXXFSNKFCIIQDHT 318
           G N      G I+L+ NL L+NVL++P    N                F    C+IQD  
Sbjct: 479 GSNVKIAGIGVIKLNSNLTLKNVLYIPEFRLNLLSVSQQTKDMKCKIYFDEDCCVIQDPI 538

Query: 319 LRNLIGAGTLCDGVYIFKPVRVRSLQANKVGISDA------------SMLWHKRLGHP 456
               IG G    G+Y+   +   S++   V I+ +            S LWH RLGHP
Sbjct: 539 KEQKIGRGNQIGGLYV---LDTSSVECTSVDINSSVTEKQYCNAVVDSALWHSRLGHP 593



 Score = 31.2 bits (69), Expect(3) = 1e-26
 Identities = 19/44 (43%), Positives = 26/44 (59%)
 Frame = +3

Query: 3   SSEKLAGMYDSNAWIIDSGASNHTSGNLALFYDCHDI*SSPVGL 134
           SS+K+  +   N WIIDSGA++H S +  LF    D  S+ V L
Sbjct: 436 SSKKVLSL---NTWIIDSGATHHVSYDRNLFESLSDGLSNEVTL 476