BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00018758
         (1858 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAX19931.1| viral replicase [Nandina mosaic virus]                1154   0.0  
dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica ...  1147   0.0  
dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica ...  1144   0.0  
dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica ...  1144   0.0  
dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica ...  1144   0.0  
dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica ...  1142   0.0  
dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica ...  1142   0.0  
dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica ...  1139   0.0  
ref|NP_620836.1| replicase [Plantago asiatica mosaic virus] gi|1...  1118   0.0  
gb|AGW45386.1| RNA-dependent RNA polymerase, partial [Plantago a...  1061   0.0  
ref|NP_702988.1| RNA-dependent RNA polymerase [Tulip virus X] gi...  1000   0.0  
ref|NP_042695.1| RNA-dependent RNA polymerase [Cassava common mo...   867   0.0  
gb|ADE10202.1| viral replicase [Hydrangea ringspot virus]             858   0.0  
ref|YP_224084.1| viral replicase [Hydrangea ringspot virus] gi|5...   855   0.0  
ref|NP_077079.1| replicase [Clover yellow mosaic virus]               777   0.0  
ref|YP_002647027.1| replicase [Allium virus X] gi|224579235|gb|A...   773   0.0  
ref|NP_044330.1| replicase [Papaya mosaic virus] gi|139137|sp|P2...   747   0.0  
gb|ACS28233.1| replicase [Alternanthera mosaic virus]                 742   0.0  
ref|YP_459944.1| replicase [Alternanthera mosaic virus] gi|62082...   741   0.0  
gb|AFM77886.1| replicase [Hosta virus X]                              740   0.0  

>gb|AAX19931.1| viral replicase [Nandina mosaic virus]
          Length = 1368

 Score = 1154 bits (2986), Expect = 0.0
 Identities = 566/617 (91%), Positives = 585/617 (94%)
 Frame = -3

Query: 1856 KNSRTGKALHRETQTWKETQTMLTENVTANLAISVIHGAGGSGKSQALQTLLRQNPELPI 1677
            KNSRTGKALHRE+QTWKETQTMLT+N   + AISVIHGAGGSGKSQALQTLLRQNP+LPI
Sbjct: 611  KNSRTGKALHRESQTWKETQTMLTDNAEIHTAISVIHGAGGSGKSQALQTLLRQNPDLPI 670

Query: 1676 EVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSKSPVVIFDDYGKLPQGYIEAFAMTH 1497
            EVVLPTNELRLDWLKKLPHNPPEQFRTFERAFV S+ PVVIFDDYGKLPQGYIEAFAMTH
Sbjct: 671  EVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVSSRGPVVIFDDYGKLPQGYIEAFAMTH 730

Query: 1496 ASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNSKFLANKLGV 1317
            A+LEL+ILTGDPRQSTHHEANEEALISKL+PATT FSELSRYYINATHRNSKFLANKLG+
Sbjct: 731  ANLELIILTGDPRQSTHHEANEEALISKLSPATTTFSELSRYYINATHRNSKFLANKLGI 790

Query: 1316 YSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDN 1137
            YSSN CPLKVTYGFQPQPG+HLLVPSL+KKAAFTDAGHKVSTYAGCQGITAPRVQILLDN
Sbjct: 791  YSSNHCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHKVSTYAGCQGITAPRVQILLDN 850

Query: 1136 DTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFSX 957
            DTTMCTKEVLYTALSRAVDS HFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFS 
Sbjct: 851  DTTMCTKEVLYTALSRAVDSNHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFSA 910

Query: 956  XXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFDREIFTEAHGHTNCVQGDDPTTQLF 777
                           PVE+ TT LDDF+E L DKFDREIFTEAHGHTNCVQ DDPTTQLF
Sbjct: 911  PPDPPKSVMPPVTHFPVEECTTALDDFREELHDKFDREIFTEAHGHTNCVQTDDPTTQLF 970

Query: 776  SHQQAKDEALLWETIKARLTISTPEANIEEFRAKKDLGDILWANYHKAMKLPKEQPEFSE 597
            SHQQAKDEALLWETIKARLTISTPEANIEEFRAKKDLGDILW NYHKAM LPKEQP+FSE
Sbjct: 971  SHQQAKDEALLWETIKARLTISTPEANIEEFRAKKDLGDILWTNYHKAMNLPKEQPDFSE 1030

Query: 596  DLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKP 417
            +LWTRCAEEVQNTYLKKS+NQ+KGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKP
Sbjct: 1031 ELWTRCAEEVQNTYLKKSLNQLKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKP 1090

Query: 416  GQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSY 237
            GQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVL+YWDFSKP+Y
Sbjct: 1091 GQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVLSYWDFSKPAY 1150

Query: 236  ANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGP 57
            ANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGP
Sbjct: 1151 ANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGP 1210

Query: 56   TFDANTECNIAYTHTRF 6
            TFDANTECNIAYTHTRF
Sbjct: 1211 TFDANTECNIAYTHTRF 1227


>dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score = 1147 bits (2968), Expect = 0.0
 Identities = 564/618 (91%), Positives = 579/618 (93%)
 Frame = -3

Query: 1856 KNSRTGKALHRETQTWKETQTMLTENVTANLAISVIHGAGGSGKSQALQTLLRQNPELPI 1677
            KNSRTGKALHRE+Q WKETQTMLTEN   NLAISVIHGAGGSGKSQALQTLLRQ P LPI
Sbjct: 623  KNSRTGKALHRESQVWKETQTMLTENSQTNLAISVIHGAGGSGKSQALQTLLRQYPNLPI 682

Query: 1676 EVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSKSPVVIFDDYGKLPQGYIEAFAMTH 1497
            EVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCS+ PVVIFDDYGKLPQGY+EAFAMTH
Sbjct: 683  EVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSRCPVVIFDDYGKLPQGYLEAFAMTH 742

Query: 1496 ASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNSKFLANKLGV 1317
            ASLELVILTGDPRQSTHHE+NEEALISKL PAT IFSELSRYYINATHRNSKFLANKLGV
Sbjct: 743  ASLELVILTGDPRQSTHHESNEEALISKLPPATAIFSELSRYYINATHRNSKFLANKLGV 802

Query: 1316 YSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDN 1137
            YSSNSCPLKVTYGFQPQPG+HLLVPSL+KKAAFTDAGHKVSTYAGCQGITAPRVQILLDN
Sbjct: 803  YSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHKVSTYAGCQGITAPRVQILLDN 862

Query: 1136 DTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFSX 957
            DTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEF+ 
Sbjct: 863  DTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFTA 922

Query: 956  XXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFDREIFTEAHGHTNCVQGDDPTTQLF 777
                           PVED TTTLDDFKE L DKFDREIF  AHGHTNCVQ DDPTTQLF
Sbjct: 923  IPAEAKHVAPPCTHFPVEDGTTTLDDFKEELRDKFDREIFNPAHGHTNCVQTDDPTTQLF 982

Query: 776  SHQQAKDEALLWETIKARLTISTPEANIEEFRAKKDLGDILWANYHKAMKLPKEQPEFSE 597
            SHQQAKDEALLWETI ARLT+S PEAN+ EFRAKKDLGDILW NY KAMKLP EQP+FSE
Sbjct: 983  SHQQAKDEALLWETINARLTLSNPEANLAEFRAKKDLGDILWENYRKAMKLPSEQPDFSE 1042

Query: 596  DLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKP 417
            DLW RCAEEVQNTYLKKS++QIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKP
Sbjct: 1043 DLWIRCAEEVQNTYLKKSVSQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKP 1102

Query: 416  GQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSY 237
            GQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMINCEKTPQDLSRWVLNYWDFSKPSY
Sbjct: 1103 GQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMINCEKTPQDLSRWVLNYWDFSKPSY 1162

Query: 236  ANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGP 57
            ANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIF+GTL+IMRLTGEGP
Sbjct: 1163 ANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFMGTLTIMRLTGEGP 1222

Query: 56   TFDANTECNIAYTHTRFE 3
            TFDANTECNIAYTHTRF+
Sbjct: 1223 TFDANTECNIAYTHTRFD 1240


>dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score = 1144 bits (2959), Expect = 0.0
 Identities = 563/618 (91%), Positives = 578/618 (93%)
 Frame = -3

Query: 1856 KNSRTGKALHRETQTWKETQTMLTENVTANLAISVIHGAGGSGKSQALQTLLRQNPELPI 1677
            KNSRTGKALHRE+Q WKETQTMLTEN   NLAISVIHGAGGSGKSQALQTLLRQ P LPI
Sbjct: 623  KNSRTGKALHRESQVWKETQTMLTENSQTNLAISVIHGAGGSGKSQALQTLLRQYPNLPI 682

Query: 1676 EVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSKSPVVIFDDYGKLPQGYIEAFAMTH 1497
            EVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCS+ PVVIFDDYGKLPQGY+EAFAMTH
Sbjct: 683  EVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSRCPVVIFDDYGKLPQGYLEAFAMTH 742

Query: 1496 ASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNSKFLANKLGV 1317
            ASLELVILTGDPRQSTHHE+NEEALISKL PAT IFSELSRYYINATHRNSKFLANKLGV
Sbjct: 743  ASLELVILTGDPRQSTHHESNEEALISKLPPATAIFSELSRYYINATHRNSKFLANKLGV 802

Query: 1316 YSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDN 1137
            YSSNSCPLKVTYGFQPQPG+HLLVPSL+KKAAFTDAGHKVSTYAGCQGITAPRVQILLDN
Sbjct: 803  YSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHKVSTYAGCQGITAPRVQILLDN 862

Query: 1136 DTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFSX 957
            DTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEF+ 
Sbjct: 863  DTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFTA 922

Query: 956  XXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFDREIFTEAHGHTNCVQGDDPTTQLF 777
                           PVED TTTLDDFKE L DKFDREIF  AHGHTNCVQ DDPTTQLF
Sbjct: 923  IPAEAKRVAPPCTHFPVEDGTTTLDDFKEELRDKFDREIFNPAHGHTNCVQTDDPTTQLF 982

Query: 776  SHQQAKDEALLWETIKARLTISTPEANIEEFRAKKDLGDILWANYHKAMKLPKEQPEFSE 597
            SHQQAKDEALLWETI ARLT+S PEAN+ EFRAKKDLGDILW NY KAMKLP EQP+FSE
Sbjct: 983  SHQQAKDEALLWETINARLTLSNPEANLAEFRAKKDLGDILWENYRKAMKLPSEQPDFSE 1042

Query: 596  DLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKP 417
            DLW RCAEEVQNTYLKKS++QIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKP
Sbjct: 1043 DLWIRCAEEVQNTYLKKSVSQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKP 1102

Query: 416  GQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSY 237
            GQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMINCEKTPQDLSRWVLN WDFSKPSY
Sbjct: 1103 GQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMINCEKTPQDLSRWVLNCWDFSKPSY 1162

Query: 236  ANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGP 57
            ANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIF+GTL+IMRLTGEGP
Sbjct: 1163 ANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFMGTLTIMRLTGEGP 1222

Query: 56   TFDANTECNIAYTHTRFE 3
            TFDANTECNIAYTHTRF+
Sbjct: 1223 TFDANTECNIAYTHTRFD 1240


>dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score = 1144 bits (2959), Expect = 0.0
 Identities = 563/618 (91%), Positives = 578/618 (93%)
 Frame = -3

Query: 1856 KNSRTGKALHRETQTWKETQTMLTENVTANLAISVIHGAGGSGKSQALQTLLRQNPELPI 1677
            KNSRTGKALHRE+Q WKETQTMLTEN   NLAISVIHGAGGSGKSQALQTLLRQ P LPI
Sbjct: 623  KNSRTGKALHRESQVWKETQTMLTENSQTNLAISVIHGAGGSGKSQALQTLLRQYPNLPI 682

Query: 1676 EVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSKSPVVIFDDYGKLPQGYIEAFAMTH 1497
            EVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCS+ PVVIFDDYGKLPQGY+EAFAMTH
Sbjct: 683  EVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSRCPVVIFDDYGKLPQGYLEAFAMTH 742

Query: 1496 ASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNSKFLANKLGV 1317
            ASLELVILTGDPRQSTHHE+NEEALISKL PAT IFSELSRYYINATHRNSKFLANKLGV
Sbjct: 743  ASLELVILTGDPRQSTHHESNEEALISKLPPATAIFSELSRYYINATHRNSKFLANKLGV 802

Query: 1316 YSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDN 1137
            YSSNSCPLKVTYGFQPQPG+HLLVPSL+KKAAFTDAGHKVSTYAGCQGITAPRVQILLDN
Sbjct: 803  YSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHKVSTYAGCQGITAPRVQILLDN 862

Query: 1136 DTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFSX 957
            DTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEF+ 
Sbjct: 863  DTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFTA 922

Query: 956  XXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFDREIFTEAHGHTNCVQGDDPTTQLF 777
                           PVED TTTLDDFKE L DKFDREIF  AHGHTNCVQ DDPTTQLF
Sbjct: 923  IPAEAKRVAPPCTHFPVEDGTTTLDDFKEELRDKFDREIFNPAHGHTNCVQTDDPTTQLF 982

Query: 776  SHQQAKDEALLWETIKARLTISTPEANIEEFRAKKDLGDILWANYHKAMKLPKEQPEFSE 597
            SHQQAKDEALLWETI ARLT+S PEAN+ EFRAKKDLGDILW NY KAMKLP EQP+FSE
Sbjct: 983  SHQQAKDEALLWETINARLTLSNPEANLAEFRAKKDLGDILWENYRKAMKLPSEQPDFSE 1042

Query: 596  DLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKP 417
            DLW RCAEEVQNTYLKKS++QIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKP
Sbjct: 1043 DLWIRCAEEVQNTYLKKSVSQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKP 1102

Query: 416  GQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSY 237
            GQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMINCEKTPQDLSRWVLN WDFSKPSY
Sbjct: 1103 GQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMINCEKTPQDLSRWVLNCWDFSKPSY 1162

Query: 236  ANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGP 57
            ANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIF+GTL+IMRLTGEGP
Sbjct: 1163 ANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFMGTLTIMRLTGEGP 1222

Query: 56   TFDANTECNIAYTHTRFE 3
            TFDANTECNIAYTHTRF+
Sbjct: 1223 TFDANTECNIAYTHTRFD 1240


>dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score = 1144 bits (2959), Expect = 0.0
 Identities = 563/618 (91%), Positives = 578/618 (93%)
 Frame = -3

Query: 1856 KNSRTGKALHRETQTWKETQTMLTENVTANLAISVIHGAGGSGKSQALQTLLRQNPELPI 1677
            KNSRTGKALHRE+Q WKETQTMLTEN   NLAISVIHGAGGSGKSQALQTLLRQ P LPI
Sbjct: 623  KNSRTGKALHRESQVWKETQTMLTENSQTNLAISVIHGAGGSGKSQALQTLLRQYPNLPI 682

Query: 1676 EVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSKSPVVIFDDYGKLPQGYIEAFAMTH 1497
            EVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCS+ PVVIFDDYGKLPQGY+EAFAMTH
Sbjct: 683  EVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSRCPVVIFDDYGKLPQGYLEAFAMTH 742

Query: 1496 ASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNSKFLANKLGV 1317
            ASLELVILTGDPRQSTHHE+NEEALISKL PAT IFSELSRYYINATHRNSKFLANKLGV
Sbjct: 743  ASLELVILTGDPRQSTHHESNEEALISKLPPATAIFSELSRYYINATHRNSKFLANKLGV 802

Query: 1316 YSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDN 1137
            YSSNSCPLKVTYGFQPQPG+HLLVPSL+KKAAFTDAGHKVSTYAGCQGITAPRVQILLDN
Sbjct: 803  YSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHKVSTYAGCQGITAPRVQILLDN 862

Query: 1136 DTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFSX 957
            DTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEF+ 
Sbjct: 863  DTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFTA 922

Query: 956  XXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFDREIFTEAHGHTNCVQGDDPTTQLF 777
                           PVED TTTLDDFKE L DKFDREIF  AHGHTNCVQ DDPTTQLF
Sbjct: 923  IPAEAKRVAPPCTHFPVEDGTTTLDDFKEELRDKFDREIFNPAHGHTNCVQTDDPTTQLF 982

Query: 776  SHQQAKDEALLWETIKARLTISTPEANIEEFRAKKDLGDILWANYHKAMKLPKEQPEFSE 597
            SHQQAKDEALLWETI ARLT+S PEAN+ EFRAKKDLGDILW NY KAMKLP EQP+FSE
Sbjct: 983  SHQQAKDEALLWETINARLTLSNPEANLAEFRAKKDLGDILWENYRKAMKLPSEQPDFSE 1042

Query: 596  DLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKP 417
            DLW RCAEEVQNTYLKKS++QIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKP
Sbjct: 1043 DLWIRCAEEVQNTYLKKSVSQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKP 1102

Query: 416  GQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSY 237
            GQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMINCEKTPQDLSRWVLN WDFSKPSY
Sbjct: 1103 GQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMINCEKTPQDLSRWVLNCWDFSKPSY 1162

Query: 236  ANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGP 57
            ANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIF+GTL+IMRLTGEGP
Sbjct: 1163 ANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFMGTLTIMRLTGEGP 1222

Query: 56   TFDANTECNIAYTHTRFE 3
            TFDANTECNIAYTHTRF+
Sbjct: 1223 TFDANTECNIAYTHTRFD 1240


>dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score = 1142 bits (2954), Expect = 0.0
 Identities = 561/618 (90%), Positives = 577/618 (93%)
 Frame = -3

Query: 1856 KNSRTGKALHRETQTWKETQTMLTENVTANLAISVIHGAGGSGKSQALQTLLRQNPELPI 1677
            KNSRTGKALHRE+Q WKETQTMLTEN   NLAISVIHGAGGSGKSQALQTLLRQ P LPI
Sbjct: 623  KNSRTGKALHRESQVWKETQTMLTENSQTNLAISVIHGAGGSGKSQALQTLLRQYPNLPI 682

Query: 1676 EVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSKSPVVIFDDYGKLPQGYIEAFAMTH 1497
            EVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCS+ PVVIFDDYGKLPQGY+EAFAMTH
Sbjct: 683  EVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSRCPVVIFDDYGKLPQGYLEAFAMTH 742

Query: 1496 ASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNSKFLANKLGV 1317
            ASLELVILTGDPRQSTHHE+NEEALISKL PAT IFSELSRYYINATHRNSK LANKLGV
Sbjct: 743  ASLELVILTGDPRQSTHHESNEEALISKLPPATAIFSELSRYYINATHRNSKLLANKLGV 802

Query: 1316 YSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDN 1137
            YSSNSCPLKVTYGFQPQPG+HLLVPSL+KKAAFTDAGHKVSTYAGCQGITAPRVQILLDN
Sbjct: 803  YSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHKVSTYAGCQGITAPRVQILLDN 862

Query: 1136 DTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFSX 957
            DTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEF+ 
Sbjct: 863  DTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFTA 922

Query: 956  XXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFDREIFTEAHGHTNCVQGDDPTTQLF 777
                           PVED TTTLDDFKE L DKFDREIF  AHGHTNCVQ DDPTTQLF
Sbjct: 923  IPAEAKHVAPPCTHFPVEDGTTTLDDFKEELRDKFDREIFNPAHGHTNCVQTDDPTTQLF 982

Query: 776  SHQQAKDEALLWETIKARLTISTPEANIEEFRAKKDLGDILWANYHKAMKLPKEQPEFSE 597
            SHQQAKDEALLWETI ARLT+S PEAN+ EFRAKKDLGDILW NY KAMKLP EQP+FSE
Sbjct: 983  SHQQAKDEALLWETINARLTLSNPEANLAEFRAKKDLGDILWENYRKAMKLPSEQPDFSE 1042

Query: 596  DLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKP 417
            DLW RCAEEVQNTYLKKS++QIKGGERRQSPDFHEH ILIFLKSQWVKKMEKLGAKKIKP
Sbjct: 1043 DLWIRCAEEVQNTYLKKSVSQIKGGERRQSPDFHEHHILIFLKSQWVKKMEKLGAKKIKP 1102

Query: 416  GQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSY 237
            GQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMINCE+TPQDLSRWVLNYWDFSKPSY
Sbjct: 1103 GQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMINCERTPQDLSRWVLNYWDFSKPSY 1162

Query: 236  ANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGP 57
            ANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIF+GTL+IMRLTGEGP
Sbjct: 1163 ANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFMGTLTIMRLTGEGP 1222

Query: 56   TFDANTECNIAYTHTRFE 3
            TFDANTECNIAYTHTRF+
Sbjct: 1223 TFDANTECNIAYTHTRFD 1240


>dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score = 1142 bits (2953), Expect = 0.0
 Identities = 562/618 (90%), Positives = 576/618 (93%)
 Frame = -3

Query: 1856 KNSRTGKALHRETQTWKETQTMLTENVTANLAISVIHGAGGSGKSQALQTLLRQNPELPI 1677
            KNSRTGKALHRE+Q WKETQTML EN   NLAISVIHGAGGSGKSQALQTLLRQ P LPI
Sbjct: 623  KNSRTGKALHRESQVWKETQTMLAENSQTNLAISVIHGAGGSGKSQALQTLLRQYPNLPI 682

Query: 1676 EVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSKSPVVIFDDYGKLPQGYIEAFAMTH 1497
            EVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCS+ PVVIFDDYGKLPQGY+EAFA+TH
Sbjct: 683  EVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSRCPVVIFDDYGKLPQGYLEAFALTH 742

Query: 1496 ASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNSKFLANKLGV 1317
            ASLELVILTGDPRQSTHHE+NEEALISKL PAT IFSELSRYYINATHRNSKFLANKLGV
Sbjct: 743  ASLELVILTGDPRQSTHHESNEEALISKLPPATAIFSELSRYYINATHRNSKFLANKLGV 802

Query: 1316 YSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDN 1137
            YSSN CPLKVTYGFQPQPG+HLLVPSL+KKAAFTDAGHKVSTYAGCQGITAPRVQILLDN
Sbjct: 803  YSSNPCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHKVSTYAGCQGITAPRVQILLDN 862

Query: 1136 DTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFSX 957
            DTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEF+ 
Sbjct: 863  DTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFTA 922

Query: 956  XXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFDREIFTEAHGHTNCVQGDDPTTQLF 777
                           PVED TTTLDDFKE L DKFDREIF   HGHTNCVQ DDPTTQLF
Sbjct: 923  TTAEAKPVAPPCTHFPVEDGTTTLDDFKEELHDKFDREIFNPTHGHTNCVQTDDPTTQLF 982

Query: 776  SHQQAKDEALLWETIKARLTISTPEANIEEFRAKKDLGDILWANYHKAMKLPKEQPEFSE 597
            SHQQAKDEALLWETI ARLTIS PEAN+ EFRAKKDLGDILW NY KAMKLP EQP+FSE
Sbjct: 983  SHQQAKDEALLWETINARLTISNPEANLAEFRAKKDLGDILWENYRKAMKLPNEQPDFSE 1042

Query: 596  DLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKP 417
            DLW RCAEEVQNTYLKKS+ QIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKP
Sbjct: 1043 DLWIRCAEEVQNTYLKKSVAQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKP 1102

Query: 416  GQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSY 237
            GQTIASFQQHAVMLYGTMARYMRRFR+ALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSY
Sbjct: 1103 GQTIASFQQHAVMLYGTMARYMRRFREALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSY 1162

Query: 236  ANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGP 57
            ANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTL+IMRLTGEGP
Sbjct: 1163 ANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLTIMRLTGEGP 1222

Query: 56   TFDANTECNIAYTHTRFE 3
            TFDANTECNIAYTHTRF+
Sbjct: 1223 TFDANTECNIAYTHTRFD 1240


>dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score = 1139 bits (2947), Expect = 0.0
 Identities = 560/618 (90%), Positives = 576/618 (93%)
 Frame = -3

Query: 1856 KNSRTGKALHRETQTWKETQTMLTENVTANLAISVIHGAGGSGKSQALQTLLRQNPELPI 1677
            KNSRTGKALHRE+Q WKETQ MLTEN   NLAISVIHGAGGSGKSQALQTLLRQ P LPI
Sbjct: 623  KNSRTGKALHRESQVWKETQAMLTENSQTNLAISVIHGAGGSGKSQALQTLLRQYPNLPI 682

Query: 1676 EVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSKSPVVIFDDYGKLPQGYIEAFAMTH 1497
            EVVLPTNELRLDW KKLPHNPPEQFRTFERAFVCS+ PVVIFDDYGKLPQGY+EAFAMTH
Sbjct: 683  EVVLPTNELRLDWPKKLPHNPPEQFRTFERAFVCSRCPVVIFDDYGKLPQGYLEAFAMTH 742

Query: 1496 ASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNSKFLANKLGV 1317
            ASLELVILTGDPRQSTHHE+NEEALISKL PAT IFSELSRYYINATHRNSKFLANKLGV
Sbjct: 743  ASLELVILTGDPRQSTHHESNEEALISKLPPATAIFSELSRYYINATHRNSKFLANKLGV 802

Query: 1316 YSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDN 1137
            YSSNSCPLKVTYGFQP+PG+HLLVPSL+KKAAFTDAGHKVSTYAGCQGITAPRVQILLDN
Sbjct: 803  YSSNSCPLKVTYGFQPRPGLHLLVPSLVKKAAFTDAGHKVSTYAGCQGITAPRVQILLDN 862

Query: 1136 DTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFSX 957
            DTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEF+ 
Sbjct: 863  DTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFTA 922

Query: 956  XXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFDREIFTEAHGHTNCVQGDDPTTQLF 777
                           PVED TTTLDDFKE L DKFDREIF  AHGHTNCVQ DDPTTQLF
Sbjct: 923  IPAEAKHVAPPCTHFPVEDGTTTLDDFKEELRDKFDREIFNPAHGHTNCVQTDDPTTQLF 982

Query: 776  SHQQAKDEALLWETIKARLTISTPEANIEEFRAKKDLGDILWANYHKAMKLPKEQPEFSE 597
            SHQQAKDEALLWETI ARLT+S PEAN+ EFRAKKDLGDILW NY KAMKLP EQP+FSE
Sbjct: 983  SHQQAKDEALLWETINARLTLSNPEANLAEFRAKKDLGDILWENYRKAMKLPSEQPDFSE 1042

Query: 596  DLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKP 417
            DLW RCAEEVQNTYLKKS++QIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKP
Sbjct: 1043 DLWIRCAEEVQNTYLKKSVSQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKP 1102

Query: 416  GQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSY 237
            GQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMINCEKTPQDLSRWVLNYWDFSKPSY
Sbjct: 1103 GQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMINCEKTPQDLSRWVLNYWDFSKPSY 1162

Query: 236  ANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGP 57
            ANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIF+GTL+IMRLTGEGP
Sbjct: 1163 ANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFMGTLTIMRLTGEGP 1222

Query: 56   TFDANTECNIAYTHTRFE 3
             FDANTECNIAYTHTRF+
Sbjct: 1223 AFDANTECNIAYTHTRFD 1240


>ref|NP_620836.1| replicase [Plantago asiatica mosaic virus]
            gi|1173174|sp|Q07518.1|RDRP_P1AMV RecName: Full=RNA
            replication protein; AltName: Full=156 kDa protein;
            AltName: Full=ORF1 protein; Includes: RecName:
            Full=RNA-directed RNA polymerase; Includes: RecName:
            Full=Helicase gi|311645|emb|CAA79761.1| 156K-protein
            [Plantago asiatica mosaic virus]
          Length = 1385

 Score = 1118 bits (2892), Expect = 0.0
 Identities = 551/618 (89%), Positives = 572/618 (92%)
 Frame = -3

Query: 1856 KNSRTGKALHRETQTWKETQTMLTENVTANLAISVIHGAGGSGKSQALQTLLRQNPELPI 1677
            KNSRTGKALHRE+QTWKETQTMLTEN    LAISVIHGAGGSGKSQALQTLLRQ+  LPI
Sbjct: 628  KNSRTGKALHRESQTWKETQTMLTENTQTELAISVIHGAGGSGKSQALQTLLRQDHSLPI 687

Query: 1676 EVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSKSPVVIFDDYGKLPQGYIEAFAMTH 1497
            EVVLPTNELRLDWLKKLPHNPPEQFRTFERAFV S SPVVIFDDYGKLPQGY+EAFA+TH
Sbjct: 688  EVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVSSHSPVVIFDDYGKLPQGYLEAFALTH 747

Query: 1496 ASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNSKFLANKLGV 1317
            A+LELVILTGDPRQSTHHE+NEEALISKL PATTI+S  SRYYINAT RNSKFLANKLGV
Sbjct: 748  ANLELVILTGDPRQSTHHESNEEALISKLPPATTIYSAFSRYYINATLRNSKFLANKLGV 807

Query: 1316 YSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDN 1137
            YS+NSCPL VTYGFQP PG+HLLVPSLMKKAAFTDAGHKVS+YAGCQGITAP+VQILLDN
Sbjct: 808  YSANSCPLNVTYGFQPLPGLHLLVPSLMKKAAFTDAGHKVSSYAGCQGITAPKVQILLDN 867

Query: 1136 DTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFSX 957
            DTTMCTKEVLYTALSRAVDSIHFVN+NAQSSAFWEKLEATPYLKTFLSLVREDKI EF  
Sbjct: 868  DTTMCTKEVLYTALSRAVDSIHFVNTNAQSSAFWEKLEATPYLKTFLSLVREDKITEFQA 927

Query: 956  XXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFDREIFTEAHGHTNCVQGDDPTTQLF 777
                           PVE+  TTLDDFKE L DKFDREIFT   GHTNCVQ DDPTTQLF
Sbjct: 928  PADAPKPVTPPVTHFPVEEPATTLDDFKEELRDKFDREIFTSDRGHTNCVQTDDPTTQLF 987

Query: 776  SHQQAKDEALLWETIKARLTISTPEANIEEFRAKKDLGDILWANYHKAMKLPKEQPEFSE 597
            SHQQAKDEALLWE I+ARL ISTPEANIEEFRAKKDLGDILW NYH+AM LPKEQP+FSE
Sbjct: 988  SHQQAKDEALLWEMIRARLKISTPEANIEEFRAKKDLGDILWVNYHRAMGLPKEQPDFSE 1047

Query: 596  DLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKP 417
            DLW RCAEEVQNTYLKK++ Q+KGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAK+IKP
Sbjct: 1048 DLWNRCAEEVQNTYLKKTMAQLKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKEIKP 1107

Query: 416  GQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSY 237
            GQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSY
Sbjct: 1108 GQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSY 1167

Query: 236  ANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGP 57
            ANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGP
Sbjct: 1168 ANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGP 1227

Query: 56   TFDANTECNIAYTHTRFE 3
            TFDANTECNIAYTHTRF+
Sbjct: 1228 TFDANTECNIAYTHTRFD 1245


>gb|AGW45386.1| RNA-dependent RNA polymerase, partial [Plantago asiatica mosaic
            virus]
          Length = 711

 Score = 1061 bits (2745), Expect = 0.0
 Identities = 518/571 (90%), Positives = 538/571 (94%)
 Frame = -3

Query: 1715 LQTLLRQNPELPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSKSPVVIFDDYGK 1536
            LQTLLRQ+P LP+EVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCS+ PVVIFDDYGK
Sbjct: 1    LQTLLRQHPSLPVEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSRCPVVIFDDYGK 60

Query: 1535 LPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINAT 1356
            LPQGY+EAFAMTHASLELVILTGDPRQSTHHEANEEALISKL PATTIFSELSRYYINAT
Sbjct: 61   LPQGYLEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLPPATTIFSELSRYYINAT 120

Query: 1355 HRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAGCQ 1176
            HRNSKFLANKLGVYSSNSCPLKVTYG QPQPG+HLLVPSLMKKAAFTDAGHKVSTYAGCQ
Sbjct: 121  HRNSKFLANKLGVYSSNSCPLKVTYGSQPQPGLHLLVPSLMKKAAFTDAGHKVSTYAGCQ 180

Query: 1175 GITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFL 996
            GITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHF+NSNAQSSAFWEKLEATPYLKTFL
Sbjct: 181  GITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFINSNAQSSAFWEKLEATPYLKTFL 240

Query: 995  SLVREDKIEEFSXXXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFDREIFTEAHGHT 816
            SLVRED++ EFS                PVED TTTLDDF+E L DKFDREIF +AHGHT
Sbjct: 241  SLVREDRVAEFSASPADPTPVAPPCTHFPVEDGTTTLDDFREELQDKFDREIFNQAHGHT 300

Query: 815  NCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEEFRAKKDLGDILWANYHK 636
            NCVQ D+PTTQLF+HQQAKDEALLWETI ARLTIS+PEAN+ EFRAKKDLGDILW NY K
Sbjct: 301  NCVQTDNPTTQLFAHQQAKDEALLWETINARLTISSPEANLAEFRAKKDLGDILWENYRK 360

Query: 635  AMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHEHQILIFLKSQWV 456
            AMKLP EQP+FSEDLWTRCAEEVQNTYLKKS+ QIKGG+RRQSPDFHEHQILIFLKSQWV
Sbjct: 361  AMKLPNEQPDFSEDLWTRCAEEVQNTYLKKSVAQIKGGDRRQSPDFHEHQILIFLKSQWV 420

Query: 455  KKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSR 276
            KKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMINCEKTPQDLSR
Sbjct: 421  KKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMINCEKTPQDLSR 480

Query: 275  WVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFL 96
            WVLN+WDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFL
Sbjct: 481  WVLNHWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFL 540

Query: 95   GTLSIMRLTGEGPTFDANTECNIAYTHTRFE 3
            GTL+IMRLTGEGPTFDANTECNIAYTHTRF+
Sbjct: 541  GTLTIMRLTGEGPTFDANTECNIAYTHTRFD 571


>ref|NP_702988.1| RNA-dependent RNA polymerase [Tulip virus X]
            gi|23491554|dbj|BAC16785.1| RNA-dependent RNA polymerase
            [Tulip virus X]
          Length = 1361

 Score = 1000 bits (2586), Expect = 0.0
 Identities = 487/617 (78%), Positives = 540/617 (87%)
 Frame = -3

Query: 1856 KNSRTGKALHRETQTWKETQTMLTENVTANLAISVIHGAGGSGKSQALQTLLRQNPELPI 1677
            KNSRTGKALH+E+Q WKETQT LTE     L +SVIHGAGGSGKSQALQT+LR +P+LP+
Sbjct: 604  KNSRTGKALHKESQNWKETQTRLTETSETRLGLSVIHGAGGSGKSQALQTMLRNHPDLPV 663

Query: 1676 EVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSKSPVVIFDDYGKLPQGYIEAFAMTH 1497
            EVVLPTNELR DWL+KLPHNPPEQFRTFERAFV S +PVVIFDDYGKLPQG++EAFA+  
Sbjct: 664  EVVLPTNELRXDWLRKLPHNPPEQFRTFERAFVSSTAPVVIFDDYGKLPQGFLEAFALCR 723

Query: 1496 ASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNSKFLANKLGV 1317
              L+L ILTGDPRQSTHHE+NE+A+I++L PAT IFS L RYYINATHRN K LANKLGV
Sbjct: 724  PGLKLAILTGDPRQSTHHESNEQAMIAQLEPATKIFSALCRYYINATHRNVKELANKLGV 783

Query: 1316 YSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDN 1137
            YSSN  PL V+YGF+P+PG+HLLVPSL+KKAAF DAGHKVSTYAGCQGITAP+VQILLD+
Sbjct: 784  YSSNPSPLHVSYGFRPEPGLHLLVPSLVKKAAFADAGHKVSTYAGCQGITAPKVQILLDS 843

Query: 1136 DTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFSX 957
            DTTMC+ EVLYTALSRAVDSIHF+NSNAQSSAFWEKLEATPYLKTFLSLVRE K+EEF+ 
Sbjct: 844  DTTMCSSEVLYTALSRAVDSIHFINSNAQSSAFWEKLEATPYLKTFLSLVREHKLEEFTA 903

Query: 956  XXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFDREIFTEAHGHTNCVQGDDPTTQLF 777
                           PVE+ + TL   ++SL+DK+DREI    HG TNCVQ +D T QLF
Sbjct: 904  VEDPPQEVAPPVTHFPVENASHTLGLIQDSLADKYDREILNTNHGFTNCVQTEDLTVQLF 963

Query: 776  SHQQAKDEALLWETIKARLTISTPEANIEEFRAKKDLGDILWANYHKAMKLPKEQPEFSE 597
            SHQQAKDEALLWETI ARL +STPEAN+ EF AKKDLGD+LW NYH+AMKLPKEQP+FS 
Sbjct: 964  SHQQAKDEALLWETIDARLRLSTPEANLAEFHAKKDLGDVLWENYHRAMKLPKEQPDFSP 1023

Query: 596  DLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKP 417
            +LW RCA EVQ TYL KS+ QIKGGERRQSPDF E++ILIFLKSQWVKKMEKLGA KIKP
Sbjct: 1024 ELWERCAAEVQQTYLSKSLQQIKGGERRQSPDFPENKILIFLKSQWVKKMEKLGAPKIKP 1083

Query: 416  GQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSY 237
            GQTIASFQQ AVMLYGTMARYMRR+RDAL PNNIMINCE+TP DLSRWV N+WDF+KP Y
Sbjct: 1084 GQTIASFQQAAVMLYGTMARYMRRYRDALGPNNIMINCERTPADLSRWVRNHWDFTKPXY 1143

Query: 236  ANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGP 57
            ANDFTAFDQSQDGAMLQFEILKAK+FNLPEWVIEGYLDIKL+P+IF GTL+IMRLTGEGP
Sbjct: 1144 ANDFTAFDQSQDGAMLQFEILKAKFFNLPEWVIEGYLDIKLTPQIFTGTLAIMRLTGEGP 1203

Query: 56   TFDANTECNIAYTHTRF 6
            TFDANTECNIAYTHTRF
Sbjct: 1204 TFDANTECNIAYTHTRF 1220


>ref|NP_042695.1| RNA-dependent RNA polymerase [Cassava common mosaic virus]
            gi|773405|gb|AAC54775.1| ORF 1; putative RNA dependent
            RNA polymerase [Cassava common mosaic virus]
            gi|1587823|prf||2207297A ORF 1
          Length = 1449

 Score =  867 bits (2240), Expect = 0.0
 Identities = 426/618 (68%), Positives = 499/618 (80%)
 Frame = -3

Query: 1856 KNSRTGKALHRETQTWKETQTMLTENVTANLAISVIHGAGGSGKSQALQTLLRQNPELPI 1677
            KN RTGK L +E+Q+WKE QT+  ++    + +SVIHGAGGSGKS ALQ LLR +PELPI
Sbjct: 698  KNGRTGKCLQQESQSWKEAQTLKVDHNIRPVPLSVIHGAGGSGKSAALQDLLRDHPELPI 757

Query: 1676 EVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSKSPVVIFDDYGKLPQGYIEAFAMTH 1497
            +V+LPTNELR+DWL KLP N PE FRTFE+A++ + +P +I DDYGKLPQGY+EAFA+TH
Sbjct: 758  QVILPTNELRMDWLSKLPRNRPENFRTFEKAYLQTNAPSIIMDDYGKLPQGYVEAFAVTH 817

Query: 1496 ASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNSKFLANKLGV 1317
             ++EL++LTGD +QS HHE NE+A+I++L P+T IFS+ SRYYINATHRN+K LAN LGV
Sbjct: 818  PNVELIVLTGDNKQSVHHETNEQAMIAQLEPSTQIFSQFSRYYINATHRNAKKLANMLGV 877

Query: 1316 YSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDN 1137
            YS N+  LK+T+GFQP   +HLLVPSL+KKAAF++AGHK STYAGCQGITA ++QILLD+
Sbjct: 878  YSDNNKELKITHGFQPIKDIHLLVPSLIKKAAFSEAGHKTSTYAGCQGITARKLQILLDS 937

Query: 1136 DTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFSX 957
            +T MC++EVLYTALSRAVDSIHF+N+   SS FWEKLEATPYLKTFLS+VREDKI E+  
Sbjct: 938  NTPMCSQEVLYTALSRAVDSIHFINTAPTSSNFWEKLEATPYLKTFLSMVREDKILEWRP 997

Query: 956  XXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFDREIFTEAHGHTNCVQGDDPTTQLF 777
                           PVE+  T L++F E L+ K +REIF E+HGHTNCVQ D+   Q  
Sbjct: 998  KEPEPAKEEPPKTHFPVENGNTILEEFTEELAQKHEREIFNESHGHTNCVQTDNKIIQTL 1057

Query: 776  SHQQAKDEALLWETIKARLTISTPEANIEEFRAKKDLGDILWANYHKAMKLPKEQPEFSE 597
            SHQQAKDEALLWETIKARL IS  + N  EF  KKD+GDILW NY +AM LP++   F E
Sbjct: 1058 SHQQAKDEALLWETIKARLVISHKQHNWTEFVKKKDIGDILWLNYKRAMHLPEDPIPF-E 1116

Query: 596  DLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKP 417
            +LW   A E+Q+TYL KS   +K GERRQSPDF E  ILIFLKSQWVKKMEKLGA KIKP
Sbjct: 1117 ELWELAAREIQHTYLSKSTQMLKNGERRQSPDFGEKDILIFLKSQWVKKMEKLGAPKIKP 1176

Query: 416  GQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSY 237
            GQTIASFQQ AVMLYGTMARYMRR RD   P +IMINCE+TP DLS W LNYW+F KPSY
Sbjct: 1177 GQTIASFQQSAVMLYGTMARYMRRIRDIYMPEHIMINCERTPTDLSYWALNYWNFDKPSY 1236

Query: 236  ANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGP 57
            ANDFTAFDQSQDGAMLQFEILKAK+ N+PEWV+EGYLDIKL  +IFLGTLSIMRLTGE  
Sbjct: 1237 ANDFTAFDQSQDGAMLQFEILKAKHHNIPEWVLEGYLDIKLDSRIFLGTLSIMRLTGEYQ 1296

Query: 56   TFDANTECNIAYTHTRFE 3
            TFDANTECNIAYTHTRF+
Sbjct: 1297 TFDANTECNIAYTHTRFD 1314


>gb|ADE10202.1| viral replicase [Hydrangea ringspot virus]
          Length = 1386

 Score =  858 bits (2218), Expect = 0.0
 Identities = 424/618 (68%), Positives = 486/618 (78%)
 Frame = -3

Query: 1856 KNSRTGKALHRETQTWKETQTMLTENVTANLAISVIHGAGGSGKSQALQTLLRQNPELPI 1677
            KN RTG  L +E+ TWKETQT+  E +   + +SVIHG GGSGKS A Q LLRQ+P++ +
Sbjct: 630  KNHRTGALLLKESATWKETQTLKAERLEKTVGLSVIHGCGGSGKSFAFQELLRQHPDVDL 689

Query: 1676 EVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSKSPVVIFDDYGKLPQGYIEAFAMTH 1497
            +VVLPTNELRLDW+ K P   PE+ +T+ERAF    SPVV+FDDYGKLP GYIEA+    
Sbjct: 690  QVVLPTNELRLDWMAKAPKVRPEKIKTYERAFTGVSSPVVLFDDYGKLPAGYIEAYVAVQ 749

Query: 1496 ASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNSKFLANKLGV 1317
              +ELVILTGD RQSTHHE NE+A+IS+LAPAT +F  L RYYINATHRN + LANKL V
Sbjct: 750  TRVELVILTGDARQSTHHENNEQAMISQLAPATEVFQPLCRYYINATHRNKRDLANKLEV 809

Query: 1316 YSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDN 1137
            YS      K+T GFQP   +HLLVPSL+KK+A+ + GHKVSTYAGCQGITAP++QILLDN
Sbjct: 810  YSEKEGETKITMGFQPIKDLHLLVPSLLKKSAYGEMGHKVSTYAGCQGITAPKIQILLDN 869

Query: 1136 DTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFSX 957
            DT MC+KEVLYTALSRAV SIHF+N+    S+FWEKLEATPYLK FLS VRE+ I     
Sbjct: 870  DTVMCSKEVLYTALSRAVHSIHFINTGPTHSSFWEKLEATPYLKAFLSTVREEAIAAHQL 929

Query: 956  XXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFDREIFTEAHGHTNCVQGDDPTTQLF 777
                           PVE+ +  L  + E + +KF+REIFTE  GHTNCVQ  +P  QLF
Sbjct: 930  PNADPRPDPEPKTHFPVENTSCALGAYMEKVPEKFEREIFTEDRGHTNCVQTQNPLVQLF 989

Query: 776  SHQQAKDEALLWETIKARLTISTPEANIEEFRAKKDLGDILWANYHKAMKLPKEQPEFSE 597
             HQQAKDEALLWETIKARLTIS+PEAN EEF  KKD+GDILW +Y KAM LP+E   FSE
Sbjct: 990  PHQQAKDEALLWETIKARLTISSPEANWEEFYRKKDIGDILWLHYKKAMTLPEEPLPFSE 1049

Query: 596  DLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKP 417
            DLW   A EVQNTYL K +N +K GERRQSPDF +HQIL+FLKSQWVKKMEKLG  KIK 
Sbjct: 1050 DLWRLSAAEVQNTYLSKPMNMLKNGERRQSPDFEKHQILLFLKSQWVKKMEKLGGPKIKA 1109

Query: 416  GQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSY 237
            GQTIASFQQHAVMLYGTMARYMRRFR+ L PN+I INCE TP+DLSR++ NYWDF   SY
Sbjct: 1110 GQTIASFQQHAVMLYGTMARYMRRFREVLGPNHIKINCEATPKDLSRFIQNYWDFKPASY 1169

Query: 236  ANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGP 57
            ANDFTAFDQSQDGAMLQFEILKAK+FN+PE +I+GYLDIKL+ KIFLG L IMRLTGEGP
Sbjct: 1170 ANDFTAFDQSQDGAMLQFEILKAKHFNIPEEIIQGYLDIKLNAKIFLGVLGIMRLTGEGP 1229

Query: 56   TFDANTECNIAYTHTRFE 3
            TFDANTECNIAYTHTRF+
Sbjct: 1230 TFDANTECNIAYTHTRFD 1247


>ref|YP_224084.1| viral replicase [Hydrangea ringspot virus] gi|56792005|gb|AAW30448.1|
            viral replicase [Hydrangea ringspot virus]
          Length = 1386

 Score =  855 bits (2209), Expect = 0.0
 Identities = 423/618 (68%), Positives = 485/618 (78%)
 Frame = -3

Query: 1856 KNSRTGKALHRETQTWKETQTMLTENVTANLAISVIHGAGGSGKSQALQTLLRQNPELPI 1677
            KN RTG  L +E+ TWKETQT+  E +   + +SVIHG GGSGKS A Q LLRQ+P++ +
Sbjct: 630  KNHRTGALLLKESATWKETQTLKAERLEKTVGLSVIHGCGGSGKSFAFQELLRQHPDVDL 689

Query: 1676 EVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSKSPVVIFDDYGKLPQGYIEAFAMTH 1497
            +VVLPTNELRLDW+ K P   PE+ +T+ERAF    SPVV+FDDYGKLP GYIEA+    
Sbjct: 690  QVVLPTNELRLDWMAKAPKVRPEKIKTYERAFTGVSSPVVLFDDYGKLPAGYIEAYVAVQ 749

Query: 1496 ASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNSKFLANKLGV 1317
              +ELVILTGD RQSTHHE NE+A+IS+LAPAT +F  L RYYINATHRN + LANKL V
Sbjct: 750  TRVELVILTGDARQSTHHENNEQAMISQLAPATEVFQPLCRYYINATHRNKRDLANKLEV 809

Query: 1316 YSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDN 1137
            YS      K+T GFQP   +HLLVPSL+KK+A+ + GHKVSTYAGCQGITAP++QILLDN
Sbjct: 810  YSEKEGETKITMGFQPIKDLHLLVPSLLKKSAYGEMGHKVSTYAGCQGITAPKIQILLDN 869

Query: 1136 DTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFSX 957
            DT MC+KEVLYTALSRAV SIHF+N+    S+FWEKLEATPYLK FLS VRE+ I     
Sbjct: 870  DTVMCSKEVLYTALSRAVHSIHFINTGPTHSSFWEKLEATPYLKAFLSTVREEAIAAHQL 929

Query: 956  XXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFDREIFTEAHGHTNCVQGDDPTTQLF 777
                           PVE+ +  L  + E + +KF+REIFTE  GHTNCVQ  +P  QLF
Sbjct: 930  PSADPRPDPEPKTHFPVENTSCALGAYMEKVPEKFEREIFTEDRGHTNCVQTQNPLVQLF 989

Query: 776  SHQQAKDEALLWETIKARLTISTPEANIEEFRAKKDLGDILWANYHKAMKLPKEQPEFSE 597
             HQQAKDEALLWETIKARLTIS+PEAN EEF  KKD+GDILW +Y KAM LP+E   FSE
Sbjct: 990  PHQQAKDEALLWETIKARLTISSPEANWEEFYKKKDIGDILWLHYKKAMTLPEEPLPFSE 1049

Query: 596  DLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKP 417
            DLW   A EVQNTYL K +N +K GERRQSPDF +HQIL+FLKSQWVKKMEKLG  KIK 
Sbjct: 1050 DLWRLSAAEVQNTYLSKPMNMLKNGERRQSPDFEKHQILLFLKSQWVKKMEKLGGPKIKA 1109

Query: 416  GQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSY 237
            GQTIASFQQHAVMLYGTMARYMRRFR+AL PN+I INCE TP+DLSR++ NYWDF   SY
Sbjct: 1110 GQTIASFQQHAVMLYGTMARYMRRFREALGPNHIKINCEATPKDLSRFIQNYWDFKPASY 1169

Query: 236  ANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGP 57
            ANDFTAFDQSQD AMLQFEILKAK+FN+P  +I+GYLDIKL+ KIFLG L IMRLTGEGP
Sbjct: 1170 ANDFTAFDQSQDAAMLQFEILKAKHFNIPGEIIQGYLDIKLNAKIFLGVLGIMRLTGEGP 1229

Query: 56   TFDANTECNIAYTHTRFE 3
            TFDANTECNIAYTHTRF+
Sbjct: 1230 TFDANTECNIAYTHTRFD 1247


>ref|NP_077079.1| replicase [Clover yellow mosaic virus]
          Length = 1670

 Score =  777 bits (2006), Expect = 0.0
 Identities = 376/618 (60%), Positives = 467/618 (75%), Gaps = 1/618 (0%)
 Frame = -3

Query: 1856 KNSRTGKALHRETQTWKETQTMLTENVTAN-LAISVIHGAGGSGKSQALQTLLRQNPELP 1680
            KN+RTG    ++   WKE  T + E+     +A++VIHGAGGSGKSQ LQ  L +NPE  
Sbjct: 918  KNNRTGSLTTKQPDEWKEAFTRMAESPEQRTVALTVIHGAGGSGKSQLLQRYLMENPECK 977

Query: 1679 IEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSKSPVVIFDDYGKLPQGYIEAFAMT 1500
            I  +LPTNELR DWL KLP  P    +TFERA +  + PVVIFDDY KLP GYI+AF   
Sbjct: 978  INTILPTNELRNDWLTKLPKMPLTAIQTFERALISPQKPVVIFDDYSKLPAGYIDAFLSL 1037

Query: 1499 HASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNSKFLANKLG 1320
            H ++E  ILTGDPRQST HE+NE+A+I+ L+ +T  FS+ SRYYINATHRN + LA  LG
Sbjct: 1038 HKNVEWAILTGDPRQSTFHESNEQAMINHLSKSTEHFSQFSRYYINATHRNKQDLARFLG 1097

Query: 1319 VYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAGCQGITAPRVQILLD 1140
            VYS  +    ++   +P+P  HLLVPSL+KK ++T+ G+K STYAGCQGITA RVQ+LLD
Sbjct: 1098 VYSEKTGLTSISMSSRPEPDWHLLVPSLIKKRSYTEMGYKTSTYAGCQGITADRVQVLLD 1157

Query: 1139 NDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFS 960
             DTT+C+ +VLYTALSRAV ++HF+N++A SSAFW+KL +TPYLKTFLS +RED++ E  
Sbjct: 1158 TDTTLCSDQVLYTALSRAVHAVHFINTSATSSAFWDKLNSTPYLKTFLSTLREDRLREEG 1217

Query: 959  XXXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFDREIFTEAHGHTNCVQGDDPTTQL 780
                            PVE++  +L+D  E L +K +RE+++  HG++NCVQ DDP  QL
Sbjct: 1218 PKPETPEEPKPATTHFPVENENLSLEDKVEELLEKHERELYSSDHGYSNCVQTDDPVVQL 1277

Query: 779  FSHQQAKDEALLWETIKARLTISTPEANIEEFRAKKDLGDILWANYHKAMKLPKEQPEFS 600
            FSHQQAKD+ LLW TI+ARL IS P+AN+EEFR KK++GD+LW NY +AMKLP +  EFS
Sbjct: 1278 FSHQQAKDQTLLWATIEARLKISNPKANMEEFRMKKNVGDVLWLNYKRAMKLPDKPIEFS 1337

Query: 599  EDLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIK 420
             +LW  CAEEVQ TYL K +N IK GE RQSPDF +H I +FLKSQWVKK+EKLGA KIK
Sbjct: 1338 HELWHACAEEVQKTYLSKPLNMIKNGENRQSPDFDKHTISLFLKSQWVKKLEKLGAPKIK 1397

Query: 419  PGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPS 240
            PGQTIASFQQ  VMLYGTMARYMRR R A  P NI +NCE+TPQ L+ ++ + W F +P+
Sbjct: 1398 PGQTIASFQQATVMLYGTMARYMRRIRQAFQPPNIQLNCEQTPQQLTTFIKDQWSFDQPA 1457

Query: 239  YANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEG 60
            YANDFT FDQSQDGAMLQFE+LKAK+ N+PE +I+GY+DIK + K+F G L+IMRLTGEG
Sbjct: 1458 YANDFTQFDQSQDGAMLQFEVLKAKHHNIPEAIIQGYIDIKTNAKVFTGVLAIMRLTGEG 1517

Query: 59   PTFDANTECNIAYTHTRF 6
            PTFDANTECNIA+ HTRF
Sbjct: 1518 PTFDANTECNIAFNHTRF 1535


>ref|YP_002647027.1| replicase [Allium virus X] gi|224579235|gb|ACN58194.1| replicase
            [Allium virus X]
          Length = 1701

 Score =  773 bits (1997), Expect = 0.0
 Identities = 383/618 (61%), Positives = 455/618 (73%)
 Frame = -3

Query: 1856 KNSRTGKALHRETQTWKETQTMLTENVTANLAISVIHGAGGSGKSQALQTLLRQNPELPI 1677
            +NSRTG  L  +   WKE  TM  E     +A+SVIHGAGGSGKS ALQ L+R+NPEL  
Sbjct: 951  ENSRTGLLLRSQPDHWKEALTMQAETADHTIALSVIHGAGGSGKSHALQQLIRENPELNF 1010

Query: 1676 EVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSKSPVVIFDDYGKLPQGYIEAFAMTH 1497
             VV PTNELRLDWL KLP     + +TFE+A   S +  +IF DY KLP GYIE +    
Sbjct: 1011 LVVCPTNELRLDWLAKLPKVELHRIKTFEKALADSTAATIIFGDYSKLPAGYIECYLAAR 1070

Query: 1496 ASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNSKFLANKLGV 1317
             +  L ILTGDPRQS++HE+NE A+IS+LAP+T+ F +  RYYINATHRN + LA  LGV
Sbjct: 1071 PTATLAILTGDPRQSSYHESNEGAMISQLAPSTSEFGQYCRYYINATHRNKQDLARMLGV 1130

Query: 1316 YSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDN 1137
            YS  +    ++   +P    HLLVPS++KK  + + G+K STYAGCQGITAPR+QILLD 
Sbjct: 1131 YSERTGLTSISMSSRPLTDTHLLVPSIIKKRTYMELGYKTSTYAGCQGITAPRLQILLDC 1190

Query: 1136 DTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFSX 957
            DTT+C  EVLYTALSRAV  IHF+N+ A S AFW+KL ATPYLKTFL   RE++++E   
Sbjct: 1191 DTTLCADEVLYTALSRAVHGIHFINTGATSGAFWDKLNATPYLKTFLDFTREERLKESQP 1250

Query: 956  XXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFDREIFTEAHGHTNCVQGDDPTTQLF 777
                           PVE++   L++  E L +K DREI    HGHTNCVQ +D   QLF
Sbjct: 1251 REQEPTEPEGPTTHFPVENEKFVLEEQVEELLEKHDREILRPDHGHTNCVQTEDAVIQLF 1310

Query: 776  SHQQAKDEALLWETIKARLTISTPEANIEEFRAKKDLGDILWANYHKAMKLPKEQPEFSE 597
            SHQQAKD+ALLW TI+ARL IS P+ANI EF AKK++GD+L+ +YH+AMKLP +   F E
Sbjct: 1311 SHQQAKDQALLWATIEARLKISNPKANIAEFNAKKEIGDVLFEHYHQAMKLPDKPIPFME 1370

Query: 596  DLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKP 417
            DLW  CA+EVQ TYL K IN +K GE RQSPDF ++ I +FLKSQWVKKMEKLGA KIKP
Sbjct: 1371 DLWVACAQEVQGTYLSKPINMLKNGEYRQSPDFDKNTIALFLKSQWVKKMEKLGAPKIKP 1430

Query: 416  GQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSY 237
            GQTIASFQQ AVMLYGTMARYMRR R+A  P  IMINCEK PQ LS W+ NYW F+  +Y
Sbjct: 1431 GQTIASFQQSAVMLYGTMARYMRRMREAFQPPEIMINCEKDPQTLSHWIQNYWKFNSYAY 1490

Query: 236  ANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGP 57
            ANDFT FDQSQDGAMLQFEILKAK+ ++PEWV+EGYLDIK + K+F G LSIMRLTGEGP
Sbjct: 1491 ANDFTQFDQSQDGAMLQFEILKAKHHSIPEWVLEGYLDIKTNAKVFSGVLSIMRLTGEGP 1550

Query: 56   TFDANTECNIAYTHTRFE 3
            TFDANTECNIAYTH RF+
Sbjct: 1551 TFDANTECNIAYTHLRFD 1568


>ref|NP_044330.1| replicase [Papaya mosaic virus] gi|139137|sp|P20951.1|RDRP_PMV
            RecName: Full=RNA replication protein; AltName: Full=176
            kDa protein; AltName: Full=ORF1 protein; Includes:
            RecName: Full=RNA-directed RNA polymerase; Includes:
            RecName: Full=Helicase gi|222331|dbj|BAA03050.1| unnamed
            protein product [Papaya mosaic virus]
            gi|409915202|gb|AFV46461.1| replicase [Papaya mosaic
            virus]
          Length = 1547

 Score =  747 bits (1928), Expect = 0.0
 Identities = 371/620 (59%), Positives = 454/620 (73%), Gaps = 3/620 (0%)
 Frame = -3

Query: 1856 KNSRTGKALHRETQTWKETQTMLTENVTANLAISVIHGAGGSGKSQALQTLLRQNPELPI 1677
            KN R G  L ++ + W      L E     LAISVIHGAGGSGKSQALQTL++ NPEL I
Sbjct: 785  KNCRIGALLRQQGKEWGCRFDALVEAGKRELAISVIHGAGGSGKSQALQTLIKDNPELDI 844

Query: 1676 EVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSKSPVVIFDDYGKLPQGYIEAFAMTH 1497
             VVLPTNELRLDWL+KLP  P E+F+TFE+A +   +P+VIFDDYGKLP GY+EAF +  
Sbjct: 845  TVVLPTNELRLDWLRKLPKAPQEKFKTFEKALLAPPTPIVIFDDYGKLPAGYVEAFCLYF 904

Query: 1496 ASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNSKFLANKLGV 1317
            ++++L+ILTGD +QS HHE+NE A  S + P     SEL RYYINATHRN K LANKLGV
Sbjct: 905  STVQLIILTGDCKQSVHHESNENATTSSIEPLVKEASELCRYYINATHRNKKDLANKLGV 964

Query: 1316 YSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDN 1137
            YS  +   +VT+G  P PG+H+LVPSL KK AF++ GHKVSTYAGCQGITAP++QILL  
Sbjct: 965  YSEKTGLTEVTHGTTPIPGLHMLVPSLYKKQAFSEMGHKVSTYAGCQGITAPKIQILLTE 1024

Query: 1136 DTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFSX 957
            +T++C++EVLYTALSRAV SIHFVN++  + AFW+KLE TPYLK FLS +RE+  +    
Sbjct: 1025 ETSLCSREVLYTALSRAVHSIHFVNASPNNQAFWKKLECTPYLKAFLSTLREEVAQPIEE 1084

Query: 956  XXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFDREIFTEAHGHTNCVQGDDPTTQLF 777
                             ED     ++  E + +K +REIF+E HGH+NCVQ +DP  Q+F
Sbjct: 1085 KKAEPTPVEPPRTHIAKEDAMVEYENVIEKMPEKHEREIFSEKHGHSNCVQTEDPFIQMF 1144

Query: 776  SHQQAKDEALLWETIKARLTISTPEANIEEFRAKKDLGDILWANYHKAMKLPKEQPEFSE 597
            SHQQAKD+ LLW TI+ARL IS P+AN +E+  K+ +G++L+ +Y +AM LPK    F E
Sbjct: 1145 SHQQAKDDTLLWATIEARLVISNPKANWQEYLEKRPVGEVLFESYKRAMHLPKMPIPFEE 1204

Query: 596  DLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKP 417
            DLW     EVQ TYL K  N IK G  RQSPD+  + I +FLKSQWVKKMEKLGA KIKP
Sbjct: 1205 DLWNSSMHEVQKTYLSKPENMIKNGMARQSPDYDPNVISLFLKSQWVKKMEKLGAIKIKP 1264

Query: 416  GQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVL---NYWDFSK 246
            GQTIASF Q  VML+GTMARYMRR R+   P +I INCE TP+DLS W      +W F  
Sbjct: 1265 GQTIASFHQATVMLFGTMARYMRRMREVFQPAHIRINCEMTPEDLSSWAAGEGGHWKFKG 1324

Query: 245  PSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTG 66
            PS ANDFTAFDQSQDGAMLQFEILKA++ ++PE +++ YL IK + KIFLGTL+IMRLTG
Sbjct: 1325 PSLANDFTAFDQSQDGAMLQFEILKARHHSIPEDILDAYLTIKTNSKIFLGTLAIMRLTG 1384

Query: 65   EGPTFDANTECNIAYTHTRF 6
            EGPTFDANTECNIA+THT+F
Sbjct: 1385 EGPTFDANTECNIAFTHTKF 1404


>gb|ACS28233.1| replicase [Alternanthera mosaic virus]
          Length = 1541

 Score =  742 bits (1915), Expect = 0.0
 Identities = 370/621 (59%), Positives = 447/621 (71%), Gaps = 3/621 (0%)
 Frame = -3

Query: 1856 KNSRTGKALHRETQTWKETQTMLTENVTANLAISVIHGAGGSGKSQALQTLLRQNPELPI 1677
            KNSR G  L ++ + W      L EN    LAISVIHGAGGSGKS+ALQ  L+ NP+  +
Sbjct: 779  KNSRIGALLRQQGKDWGHRFDSLVENGQRQLAISVIHGAGGSGKSRALQMYLKDNPDADV 838

Query: 1676 EVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSKSPVVIFDDYGKLPQGYIEAFAMTH 1497
             +VLPTNELRLDWLKKLP  P +Q +TFE+A +    P VIFDDYGKLP GYIEAF+   
Sbjct: 839  TIVLPTNELRLDWLKKLPTFPADQIKTFEKALLAPIKPTVIFDDYGKLPAGYIEAFSCYM 898

Query: 1496 ASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNSKFLANKLGV 1317
            +S+EL++LTGD +QS HHE+NE A+ S + P T    + SRYYINATHRN + LANKLGV
Sbjct: 899  SSVELLVLTGDSKQSVHHESNENAMSSLIEPFTLEADKYSRYYINATHRNKRDLANKLGV 958

Query: 1316 YSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDN 1137
            YS  +    +T G  P PG+HLLVPSL KK AF++ GHKVSTYAGCQG+TAPRVQILL  
Sbjct: 959  YSEVTGITSITQGNHPVPGLHLLVPSLYKKEAFSEMGHKVSTYAGCQGLTAPRVQILLSE 1018

Query: 1136 DTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFSX 957
            +T+MC++EV+YTALSRAV SIHFVN    + AFW KLE+TPYLK FLS +RED       
Sbjct: 1019 ETSMCSREVIYTALSRAVHSIHFVNCGPNNQAFWAKLESTPYLKAFLSTLREDAAPVVKP 1078

Query: 956  XXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFDREIFTEAHGHTNCVQGDDPTTQLF 777
                           PV+      +D  + + +K +REIF+E HGH+NCVQ +D   Q+F
Sbjct: 1079 KEEAPAPVDPPKTHIPVDSAMPIYEDLLDQMPEKHEREIFSERHGHSNCVQTEDTFVQMF 1138

Query: 776  SHQQAKDEALLWETIKARLTISTPEANIEEFRAKKDLGDILWANYHKAMKLPKEQPEFSE 597
            SHQQAKDE LLW TI+ARL IS P+AN +EF  K+ +GD+L+  Y +AM LP E   F  
Sbjct: 1139 SHQQAKDETLLWATIEARLVISNPKANWQEFMEKRPIGDVLFGFYREAMGLPTEPIAFEP 1198

Query: 596  DLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKP 417
             LW  C  EVQ TYL K IN +K G+ RQSPD+  + I +FLKSQWVKKMEKLGA KIKP
Sbjct: 1199 QLWESCIHEVQRTYLAKPINMLKNGQARQSPDYDPNMISLFLKSQWVKKMEKLGALKIKP 1258

Query: 416  GQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVL---NYWDFSK 246
            GQTIASF Q  VML+GTMARYMRR R+   P NI INCE TP+DL+ W +     W F+ 
Sbjct: 1259 GQTIASFHQATVMLFGTMARYMRRMREIFQPKNIAINCEMTPEDLTDWAVGSAGQWKFAG 1318

Query: 245  PSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTG 66
            PS ANDFTAFDQSQDGAMLQFE+LKAK+ ++PE V++ YL IK + KIFLGTL+IMRLTG
Sbjct: 1319 PSLANDFTAFDQSQDGAMLQFEVLKAKHHSIPEDVLDAYLHIKTNSKIFLGTLTIMRLTG 1378

Query: 65   EGPTFDANTECNIAYTHTRFE 3
            EGPTFDANTECNIA+TH +F+
Sbjct: 1379 EGPTFDANTECNIAFTHAKFQ 1399


>ref|YP_459944.1| replicase [Alternanthera mosaic virus] gi|62082367|gb|AAX62019.1|
            replicase [Alternanthera mosaic virus]
          Length = 1541

 Score =  741 bits (1914), Expect = 0.0
 Identities = 369/621 (59%), Positives = 445/621 (71%), Gaps = 3/621 (0%)
 Frame = -3

Query: 1856 KNSRTGKALHRETQTWKETQTMLTENVTANLAISVIHGAGGSGKSQALQTLLRQNPELPI 1677
            KNSR G  L ++ + W      L EN    LAISVIHGAGGSGKS+ALQ  L+ NP+  +
Sbjct: 779  KNSRIGALLRQQGKDWGHRFDSLVENGQRQLAISVIHGAGGSGKSRALQMYLKDNPDADV 838

Query: 1676 EVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSKSPVVIFDDYGKLPQGYIEAFAMTH 1497
             +VLPTNELRLDWLKKLP  P +Q +TFE+A +    P VIFDDYGKLP GYIEAF+   
Sbjct: 839  TIVLPTNELRLDWLKKLPTFPADQIKTFEKALLAPTKPTVIFDDYGKLPAGYIEAFSFYM 898

Query: 1496 ASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNSKFLANKLGV 1317
            +S EL++LTGD +QS HHE+NE A+ S + P T    + SRYYINATHRN + LANKLGV
Sbjct: 899  SSAELLVLTGDSKQSVHHESNENAMSSLIEPFTLEADKYSRYYINATHRNKRDLANKLGV 958

Query: 1316 YSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDN 1137
            YS  +    +T G  P PG+HLLVPSL KK AF++ GHK STYAGCQG+TAPRVQILL  
Sbjct: 959  YSEVTGITSITQGNHPVPGLHLLVPSLYKKQAFSEMGHKASTYAGCQGLTAPRVQILLSE 1018

Query: 1136 DTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFSX 957
            +T+MC++EV+YTALSRAV SIHFVN    + AFW KLE+TPYLK FLS +RED       
Sbjct: 1019 ETSMCSREVIYTALSRAVHSIHFVNCGPNNQAFWAKLESTPYLKAFLSTLREDAAPVVKP 1078

Query: 956  XXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFDREIFTEAHGHTNCVQGDDPTTQLF 777
                           PV+      +D  + + +K +REIF+E HGH+NCVQ +D   Q+F
Sbjct: 1079 KEEAPAPVDPPKTHIPVDSAMPIYEDLLDQMPEKHEREIFSEKHGHSNCVQTEDTFVQMF 1138

Query: 776  SHQQAKDEALLWETIKARLTISTPEANIEEFRAKKDLGDILWANYHKAMKLPKEQPEFSE 597
            SHQQAKDE LLW TI+ARL IS P+AN +EF  KK +GD+L+  Y +AM LP E   F  
Sbjct: 1139 SHQQAKDETLLWATIEARLVISNPKANWQEFMEKKPIGDVLFGFYREAMGLPTEPIAFEP 1198

Query: 596  DLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKP 417
             LW  C  E+Q TYL K IN +K G+ RQSPD+  + I +FLKSQWVKKMEKLGA KIKP
Sbjct: 1199 QLWESCIHEIQRTYLAKPINMLKNGQARQSPDYDPNMISLFLKSQWVKKMEKLGALKIKP 1258

Query: 416  GQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVL---NYWDFSK 246
            GQTIASF Q  VML+GTMARYMRR R+   P NI INCE TP+DL+ W +     W F+ 
Sbjct: 1259 GQTIASFHQATVMLFGTMARYMRRMREIFQPKNIAINCEMTPEDLTDWAVGPAGQWKFAG 1318

Query: 245  PSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTG 66
            PS ANDFTAFDQSQDGAMLQFE+LKAK+ ++PE V++ YL IK + KIFLGTL+IMRLTG
Sbjct: 1319 PSLANDFTAFDQSQDGAMLQFEVLKAKHHSIPEDVLDAYLHIKTNSKIFLGTLAIMRLTG 1378

Query: 65   EGPTFDANTECNIAYTHTRFE 3
            EGPTFDANTECNIA+TH +F+
Sbjct: 1379 EGPTFDANTECNIAFTHAKFQ 1399


>gb|AFM77886.1| replicase [Hosta virus X]
          Length = 1473

 Score =  740 bits (1910), Expect = 0.0
 Identities = 373/619 (60%), Positives = 447/619 (72%), Gaps = 2/619 (0%)
 Frame = -3

Query: 1856 KNSRTGKALHRETQTWKETQTMLTENVTANLAISVIHGAGGSGKSQALQTLLRQNPELPI 1677
            KN RTG A+H   Q WKET   + EN    L ISVIHGAGGSGKS+ LQ +L +   L  
Sbjct: 701  KNRRTGAAVHMAPQAWKETMDFIAENAERTLHISVIHGAGGSGKSRCLQEMLNKFHFLFD 760

Query: 1676 E--VVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSKSPVVIFDDYGKLPQGYIEAFAM 1503
            E  VV PTNELR DW+ KLP + P    TFERA +      VIFDDY KLP G+IEA+++
Sbjct: 761  ETLVVCPTNELRRDWIDKLPLSEPGSVLTFERALMNPAKGTVIFDDYTKLPAGFIEAYSI 820

Query: 1502 THASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNSKFLANKL 1323
               ++ELVILTGD +Q++HHE+N+ A+I+ L PA   FS+  RYY+NATHRN + LAN L
Sbjct: 821  CQPNVELVILTGDAKQASHHESNDNAMIAGLDPAALEFSKFCRYYLNATHRNPRNLANAL 880

Query: 1322 GVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAGCQGITAPRVQILL 1143
            G+YS     LKVT+     P MH+LVPSL+KKA   + GHK STYAGCQG+T  +VQI L
Sbjct: 881  GIYSEKPGNLKVTFTNHLLPEMHILVPSLLKKATLEELGHKCSTYAGCQGVTLSKVQIYL 940

Query: 1142 DNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEF 963
            D++TT+C+ EVLYTALSRAV+ I+FVNS   +  FW KLEATPYLKTFL L RE+KI E 
Sbjct: 941  DSNTTLCSNEVLYTALSRAVEQINFVNSGPFNGPFWAKLEATPYLKTFLRLTREEKINEI 1000

Query: 962  SXXXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFDREIFTEAHGHTNCVQGDDPTTQ 783
            +                PVE          E + +K  REI+ + HGHTNCVQ D+P  Q
Sbjct: 1001 TPEEPKPKEPEPPKTHFPVETSAHLYSSITEEMPEKHAREIYNKTHGHTNCVQTDEPLVQ 1060

Query: 782  LFSHQQAKDEALLWETIKARLTISTPEANIEEFRAKKDLGDILWANYHKAMKLPKEQPEF 603
            +F+HQQAKDEAL WETI+ARL I+T EAN++E   K+D+GD+L+  YHKAM LPK+   F
Sbjct: 1061 MFAHQQAKDEALFWETIEARLRITTSEANVQELNEKRDIGDLLFHAYHKAMGLPKDPIPF 1120

Query: 602  SEDLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKI 423
              DLW  CA+EVQ TYL K IN IK GE+RQ PDF ++ I++FLKSQWVKKMEKLGA  I
Sbjct: 1121 ENDLWETCAQEVQQTYLSKPINLIKNGEKRQGPDFDKNAIMLFLKSQWVKKMEKLGAPTI 1180

Query: 422  KPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKP 243
            KPGQTIASF Q  VMLYGTMARYMRR RD   P +I+INCEKTP  +S +V   WDFS  
Sbjct: 1181 KPGQTIASFHQITVMLYGTMARYMRRIRDRFCPKHILINCEKTPTQISDFVKAQWDFSDF 1240

Query: 242  SYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGE 63
            +YANDFTAFDQSQDGAMLQFEI+KAK+ N+PE +I GY+DIK + KIFLGTL+IMRLTGE
Sbjct: 1241 AYANDFTAFDQSQDGAMLQFEIIKAKFHNIPEDIILGYMDIKTNAKIFLGTLAIMRLTGE 1300

Query: 62   GPTFDANTECNIAYTHTRF 6
            GPTFDANTECNIAYTH RF
Sbjct: 1301 GPTFDANTECNIAYTHLRF 1319