BLASTX nr result

ID: Achyranthes23_contig00018358 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00018358
         (334 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40385.3| unnamed protein product [Vitis vinifera]               57   3e-06
ref|XP_002275024.1| PREDICTED: SKP1-like protein 21-like [Vitis ...    55   7e-06
ref|XP_004308068.1| PREDICTED: SKP1-like protein 21-like [Fragar...    55   1e-05

>emb|CBI40385.3| unnamed protein product [Vitis vinifera]
          Length = 351

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 39/101 (38%), Positives = 55/101 (54%), Gaps = 11/101 (10%)
 Frame = -1

Query: 334 KDQSKSSPLLNGMDNHKDTKDNCSQ-----VSTNG---SHPSIRSELCDLSD-FFAGEEN 182
           KDQ K++   + ++     + NC +     V  N    S PS RS+L D+ D  F+ + N
Sbjct: 232 KDQQKNTSSNHAIETTHKKESNCLKSVHHDVEINNNLQSSPSERSKLQDIQDDMFSPQAN 291

Query: 181 LXXXXXXXD--PSIQEQIDREVEDFTRRLNLNWSERMHELL 65
                   +  P+IQE+IDREVEDF R LN +W ERM E+L
Sbjct: 292 FEDGDIDDEFDPAIQEKIDREVEDFERILNSDWPERMQEIL 332


>ref|XP_002275024.1| PREDICTED: SKP1-like protein 21-like [Vitis vinifera]
          Length = 388

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 42/102 (41%), Positives = 57/102 (55%), Gaps = 12/102 (11%)
 Frame = -1

Query: 334 KDQSKSSPLLNGMDN-HKDTKDNCSQ-----VSTNG---SHPSIRSELCDLSD-FFAGEE 185
           KDQ K++   + ++  HK  K NC +     V  N    S PS RS+L D+ D  F+ + 
Sbjct: 232 KDQQKNTSSNHAIETTHK--KSNCLKSVHHDVEINNNLQSSPSERSKLQDIQDDMFSPQA 289

Query: 184 NLXXXXXXXD--PSIQEQIDREVEDFTRRLNLNWSERMHELL 65
           N        +  P+IQE+IDREVEDF R LN +W ERM E+L
Sbjct: 290 NFEDGDIDDEFDPAIQEKIDREVEDFERILNSDWPERMQEIL 331


>ref|XP_004308068.1| PREDICTED: SKP1-like protein 21-like [Fragaria vesca subsp. vesca]
          Length = 344

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 39/93 (41%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
 Frame = -1

Query: 334 KDQSK-SSPLLNGMDNHKDTKDNCSQVSTNGSHPSIRSEL--CDLSDFFAGEENLXXXXX 164
           KD +K SS  +NG  N +   +  S    + S PS  S L  C + DF  G+ +      
Sbjct: 231 KDPTKDSSNNVNGNCNKES--ETLSSAFHDESRPSSSSNLQDCTIIDFDDGDVD-----D 283

Query: 163 XXDPSIQEQIDREVEDFTRRLNLNWSERMHELL 65
             DP+++EQ+DREVEDF RRLN +W ERM E+L
Sbjct: 284 DLDPAMKEQLDREVEDFARRLNSDWPERMQEIL 316


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