BLASTX nr result
ID: Achyranthes23_contig00018302
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Achyranthes23_contig00018302
(319 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004299319.1| PREDICTED: putative pre-mRNA-splicing factor... 67 2e-09
gb|EMJ09774.1| hypothetical protein PRUPE_ppa023487mg [Prunus pe... 67 3e-09
emb|CBI15151.3| unnamed protein product [Vitis vinifera] 67 3e-09
ref|XP_002284415.1| PREDICTED: putative pre-mRNA-splicing factor... 67 3e-09
gb|EMJ12108.1| hypothetical protein PRUPE_ppa000714mg [Prunus pe... 66 4e-09
ref|XP_006582003.1| PREDICTED: putative pre-mRNA-splicing factor... 64 3e-08
gb|EOY22008.1| RNA helicase family protein isoform 2 [Theobroma ... 64 3e-08
gb|EOY22007.1| RNA helicase family protein isoform 1 [Theobroma ... 64 3e-08
ref|XP_004499484.1| PREDICTED: putative pre-mRNA-splicing factor... 61 2e-07
ref|XP_002522713.1| ATP-dependent RNA helicase, putative [Ricinu... 59 5e-07
ref|XP_006345152.1| PREDICTED: putative pre-mRNA-splicing factor... 59 7e-07
gb|ESW10252.1| hypothetical protein PHAVU_009G193400g [Phaseolus... 59 7e-07
ref|XP_006374093.1| RNA helicase family protein [Populus trichoc... 59 7e-07
ref|NP_001185127.1| DEAH RNA helicase homolog PRP2 [Arabidopsis ... 58 1e-06
ref|NP_174527.2| DEAH RNA helicase homolog PRP2 [Arabidopsis tha... 58 1e-06
ref|XP_006415186.1| hypothetical protein EUTSA_v10006650mg [Eutr... 57 3e-06
ref|XP_006415185.1| hypothetical protein EUTSA_v10006650mg [Eutr... 57 3e-06
ref|XP_004236490.1| PREDICTED: putative pre-mRNA-splicing factor... 57 3e-06
gb|AAF81347.1|AC007767_27 Strong similarity to an unknown pre-mR... 57 3e-06
ref|XP_006477633.1| PREDICTED: putative pre-mRNA-splicing factor... 56 4e-06
>ref|XP_004299319.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX16-like [Fragaria vesca subsp. vesca]
Length = 1042
Score = 67.0 bits (162), Expect = 2e-09
Identities = 43/88 (48%), Positives = 52/88 (59%)
Frame = -1
Query: 316 NPYQKQEREAAMLARKQRTYQLLXXXXXXXDIPAAKTNSSATIVSESKKQNSHKKRFRRK 137
N YQKQEREAAML RKQ+TY LL S+ +VSES+K +SHKKRFR+K
Sbjct: 77 NDYQKQEREAAMLVRKQKTYALLDADDDDD----EDDKSAVPVVSESRKSDSHKKRFRKK 132
Query: 136 XXXXXXXXXXDEVPPSREQDRQVKRKTS 53
DEV +E R+VKR+TS
Sbjct: 133 --ASSEDDEDDEVIVHQEDVRRVKRRTS 158
>gb|EMJ09774.1| hypothetical protein PRUPE_ppa023487mg [Prunus persica]
Length = 1052
Score = 66.6 bits (161), Expect = 3e-09
Identities = 47/106 (44%), Positives = 58/106 (54%)
Frame = -1
Query: 319 LNPYQKQEREAAMLARKQRTYQLLXXXXXXXDIPAAKTNSSATIVSESKKQNSHKKRFRR 140
LN YQKQEREAAML +KQ+TY LL + SSA ++S+S+K +SHKKRFR+
Sbjct: 78 LNLYQKQEREAAMLVKKQKTYSLLDADDEDDN---DGDTSSAQVISKSRKADSHKKRFRK 134
Query: 139 KXXXXXXXXXXDEVPPSREQDRQVKRKTSYAXXXXXXXXXXERLRD 2
K DEV Q R+VKR+T ERLRD
Sbjct: 135 K--VLSQEDEDDEVIAQEGQVRRVKRRTCSPDDDDGSESEEERLRD 178
>emb|CBI15151.3| unnamed protein product [Vitis vinifera]
Length = 954
Score = 66.6 bits (161), Expect = 3e-09
Identities = 42/92 (45%), Positives = 56/92 (60%), Gaps = 3/92 (3%)
Frame = -1
Query: 319 LNPYQKQEREAAMLARKQRTYQLL---XXXXXXXDIPAAKTNSSATIVSESKKQNSHKKR 149
LN YQKQEREAAML RKQ+TY +L I +++++A S+S+K ++HKKR
Sbjct: 76 LNVYQKQEREAAMLVRKQKTYAILDADDSDEDGGGIVDNRSSTAAPAASQSEKADTHKKR 135
Query: 148 FRRKXXXXXXXXXXDEVPPSREQDRQVKRKTS 53
FR+K DEV E+ RQVKR+TS
Sbjct: 136 FRKK-TENVEDDADDEVIARAEESRQVKRRTS 166
>ref|XP_002284415.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX16-like [Vitis vinifera]
Length = 1056
Score = 66.6 bits (161), Expect = 3e-09
Identities = 42/92 (45%), Positives = 56/92 (60%), Gaps = 3/92 (3%)
Frame = -1
Query: 319 LNPYQKQEREAAMLARKQRTYQLL---XXXXXXXDIPAAKTNSSATIVSESKKQNSHKKR 149
LN YQKQEREAAML RKQ+TY +L I +++++A S+S+K ++HKKR
Sbjct: 76 LNVYQKQEREAAMLVRKQKTYAILDADDSDEDGGGIVDNRSSTAAPAASQSEKADTHKKR 135
Query: 148 FRRKXXXXXXXXXXDEVPPSREQDRQVKRKTS 53
FR+K DEV E+ RQVKR+TS
Sbjct: 136 FRKK-TENVEDDADDEVIARAEESRQVKRRTS 166
>gb|EMJ12108.1| hypothetical protein PRUPE_ppa000714mg [Prunus persica]
Length = 1026
Score = 66.2 bits (160), Expect = 4e-09
Identities = 43/89 (48%), Positives = 54/89 (60%)
Frame = -1
Query: 319 LNPYQKQEREAAMLARKQRTYQLLXXXXXXXDIPAAKTNSSATIVSESKKQNSHKKRFRR 140
LN YQKQEREAAML +KQ+TY LL D SS +VSES+K +SHKKRFR+
Sbjct: 76 LNLYQKQEREAAMLVKKQKTYSLLDADDQDDD---DGDRSSVQVVSESRKADSHKKRFRK 132
Query: 139 KXXXXXXXXXXDEVPPSREQDRQVKRKTS 53
K DEV +++R+VKR+ S
Sbjct: 133 K--VLSQEDEDDEVIAQEKEERRVKRRIS 159
>ref|XP_006582003.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX16 [Glycine max]
Length = 1046
Score = 63.5 bits (153), Expect = 3e-08
Identities = 40/89 (44%), Positives = 53/89 (59%)
Frame = -1
Query: 319 LNPYQKQEREAAMLARKQRTYQLLXXXXXXXDIPAAKTNSSATIVSESKKQNSHKKRFRR 140
+N YQKQEREAAMLARKQ+TY +L D + S+ + S+ + HKKRFR+
Sbjct: 75 INQYQKQEREAAMLARKQKTYSILKADDDSDD---DYVDKSSVTTASSRSSDKHKKRFRK 131
Query: 139 KXXXXXXXXXXDEVPPSREQDRQVKRKTS 53
K DEV +E++RQVKR+TS
Sbjct: 132 K--TEVQDDQDDEVILRKEKERQVKRRTS 158
>gb|EOY22008.1| RNA helicase family protein isoform 2 [Theobroma cacao]
Length = 1055
Score = 63.5 bits (153), Expect = 3e-08
Identities = 41/91 (45%), Positives = 56/91 (61%), Gaps = 3/91 (3%)
Frame = -1
Query: 316 NPYQKQEREAAMLARKQRTYQLLXXXXXXXDIPAAKT---NSSATIVSESKKQNSHKKRF 146
N YQKQEREAA+LARKQ+TY +L D + + SS+ +SE++K + HKKRF
Sbjct: 77 NLYQKQEREAAILARKQKTYAILDADDNEDDTGTSSSVHHQSSSEPISEARKADKHKKRF 136
Query: 145 RRKXXXXXXXXXXDEVPPSREQDRQVKRKTS 53
R+K DEV E++R+VKR+TS
Sbjct: 137 RKK--IGSEEDEDDEVITHVEEERRVKRRTS 165
>gb|EOY22007.1| RNA helicase family protein isoform 1 [Theobroma cacao]
Length = 1054
Score = 63.5 bits (153), Expect = 3e-08
Identities = 41/91 (45%), Positives = 56/91 (61%), Gaps = 3/91 (3%)
Frame = -1
Query: 316 NPYQKQEREAAMLARKQRTYQLLXXXXXXXDIPAAKT---NSSATIVSESKKQNSHKKRF 146
N YQKQEREAA+LARKQ+TY +L D + + SS+ +SE++K + HKKRF
Sbjct: 77 NLYQKQEREAAILARKQKTYAILDADDNEDDTGTSSSVHHQSSSEPISEARKADKHKKRF 136
Query: 145 RRKXXXXXXXXXXDEVPPSREQDRQVKRKTS 53
R+K DEV E++R+VKR+TS
Sbjct: 137 RKK--IGSEEDEDDEVITHVEEERRVKRRTS 165
>ref|XP_004499484.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX16-like [Cicer arietinum]
Length = 153
Score = 60.8 bits (146), Expect = 2e-07
Identities = 35/62 (56%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Frame = -1
Query: 319 LNPYQKQEREAAMLARKQRTYQLL-XXXXXXXDIPAAKTNSSATIVSESKKQNSHKKRFR 143
LN YQKQEREAAMLARKQ TY +L + SS T S S+K NSHKKRFR
Sbjct: 75 LNQYQKQEREAAMLARKQGTYTILKDDDNIDNEYIGGDDKSSITTASTSRKPNSHKKRFR 134
Query: 142 RK 137
+K
Sbjct: 135 KK 136
>ref|XP_002522713.1| ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223538063|gb|EEF39675.1| ATP-dependent RNA helicase,
putative [Ricinus communis]
Length = 756
Score = 59.3 bits (142), Expect = 5e-07
Identities = 43/93 (46%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Frame = -1
Query: 319 LNPYQKQEREAAMLARKQRTYQLL---XXXXXXXDIPAAKTNSSATIVS-ESKKQNSHKK 152
LN YQKQEREAAMLARKQ TY LL +A N S+TI E + SHKK
Sbjct: 75 LNIYQKQEREAAMLARKQLTYTLLDADDDDDANGSDASAYGNQSSTITGFEPGRAESHKK 134
Query: 151 RFRRKXXXXXXXXXXDEVPPSREQDRQVKRKTS 53
RFR+K E+ E++RQVKR+ S
Sbjct: 135 RFRKK--IESEEDEDKELVSPVEKERQVKRRIS 165
>ref|XP_006345152.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX16-like isoform X1 [Solanum tuberosum]
Length = 1050
Score = 58.9 bits (141), Expect = 7e-07
Identities = 36/88 (40%), Positives = 54/88 (61%)
Frame = -1
Query: 316 NPYQKQEREAAMLARKQRTYQLLXXXXXXXDIPAAKTNSSATIVSESKKQNSHKKRFRRK 137
N Y +QEREAAMLARKQ+TY LL +I ++NS + S+++K+++ K+FR++
Sbjct: 76 NLYLQQEREAAMLARKQKTYSLLEADDEDENIVGVESNS---VPSQTRKEDTRTKKFRKR 132
Query: 136 XXXXXXXXXXDEVPPSREQDRQVKRKTS 53
DEV E DR+V+R+TS
Sbjct: 133 --VETHEDEDDEVVRDEEDDRRVRRRTS 158
>gb|ESW10252.1| hypothetical protein PHAVU_009G193400g [Phaseolus vulgaris]
Length = 1051
Score = 58.9 bits (141), Expect = 7e-07
Identities = 43/90 (47%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Frame = -1
Query: 319 LNPYQKQEREAAMLARKQRTYQLLXXXXXXXDIPAAKTNSSATIVSESKKQNSH-KKRFR 143
LN YQKQEREA MLARKQ+TY +L D K SS T S S++ H KKRFR
Sbjct: 75 LNQYQKQEREAVMLARKQKTYTILKADDDSDDESVDK--SSLTTSSSSRRPEDHKKKRFR 132
Query: 142 RKXXXXXXXXXXDEVPPSREQDRQVKRKTS 53
+K DE +E +RQVKR+TS
Sbjct: 133 KK--TEVEDDQDDEGILRKESERQVKRRTS 160
>ref|XP_006374093.1| RNA helicase family protein [Populus trichocarpa]
gi|550321716|gb|ERP51890.1| RNA helicase family protein
[Populus trichocarpa]
Length = 1057
Score = 58.9 bits (141), Expect = 7e-07
Identities = 49/109 (44%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Frame = -1
Query: 319 LNPYQKQEREAAMLARKQRTYQLL--XXXXXXXDIPAAKTNSSATIVSESKKQNSHKKRF 146
LN YQKQEREAA+LARKQ+TYQLL D A ++ + I + S + HKKRF
Sbjct: 76 LNLYQKQEREAAVLARKQKTYQLLDADDDDDDEDDDAGGIDNKSLIATTSDR---HKKRF 132
Query: 145 RRKXXXXXXXXXXDEVPPSREQDRQVKRKT-SYAXXXXXXXXXXERLRD 2
R+K DEV E+ RQVKR+T SY ERLRD
Sbjct: 133 RKK--IESEEDEDDEVVKQVEEARQVKRRTSSYEEDDDDSEAEQERLRD 179
>ref|NP_001185127.1| DEAH RNA helicase homolog PRP2 [Arabidopsis thaliana]
gi|332193372|gb|AEE31493.1| DEAH RNA helicase homolog
PRP2 [Arabidopsis thaliana]
Length = 1034
Score = 57.8 bits (138), Expect = 1e-06
Identities = 38/89 (42%), Positives = 47/89 (52%)
Frame = -1
Query: 319 LNPYQKQEREAAMLARKQRTYQLLXXXXXXXDIPAAKTNSSATIVSESKKQNSHKKRFRR 140
+N YQK E EAAML RKQ+TY LL ++ K +S VSES+K + KKRFR+
Sbjct: 75 VNLYQKHEAEAAMLVRKQKTYALLDADDDEDEVVVEKKSS----VSESRKSDKGKKRFRK 130
Query: 139 KXXXXXXXXXXDEVPPSREQDRQVKRKTS 53
K V RE R V+RK S
Sbjct: 131 KSGQSDESDGEVAV---REDSRHVRRKVS 156
>ref|NP_174527.2| DEAH RNA helicase homolog PRP2 [Arabidopsis thaliana]
gi|18377729|gb|AAL67014.1| putative RNA helicase
[Arabidopsis thaliana] gi|22136924|gb|AAM91806.1|
putative RNA helicase [Arabidopsis thaliana]
gi|332193371|gb|AEE31492.1| DEAH RNA helicase homolog
PRP2 [Arabidopsis thaliana]
Length = 1044
Score = 57.8 bits (138), Expect = 1e-06
Identities = 38/89 (42%), Positives = 47/89 (52%)
Frame = -1
Query: 319 LNPYQKQEREAAMLARKQRTYQLLXXXXXXXDIPAAKTNSSATIVSESKKQNSHKKRFRR 140
+N YQK E EAAML RKQ+TY LL ++ K +S VSES+K + KKRFR+
Sbjct: 75 VNLYQKHEAEAAMLVRKQKTYALLDADDDEDEVVVEKKSS----VSESRKSDKGKKRFRK 130
Query: 139 KXXXXXXXXXXDEVPPSREQDRQVKRKTS 53
K V RE R V+RK S
Sbjct: 131 KSGQSDESDGEVAV---REDSRHVRRKVS 156
>ref|XP_006415186.1| hypothetical protein EUTSA_v10006650mg [Eutrema salsugineum]
gi|557092957|gb|ESQ33539.1| hypothetical protein
EUTSA_v10006650mg [Eutrema salsugineum]
Length = 1045
Score = 56.6 bits (135), Expect = 3e-06
Identities = 37/89 (41%), Positives = 48/89 (53%)
Frame = -1
Query: 319 LNPYQKQEREAAMLARKQRTYQLLXXXXXXXDIPAAKTNSSATIVSESKKQNSHKKRFRR 140
+N YQ++E EAAML RKQ+TY LL ++ K S+ SES+K + KKRFR+
Sbjct: 75 VNLYQQREEEAAMLVRKQKTYALLDADDDEDEVVVEKKPSA----SESRKSDKGKKRFRK 130
Query: 139 KXXXXXXXXXXDEVPPSREQDRQVKRKTS 53
K V RE +R VKRK S
Sbjct: 131 KSGQSDDSEDEVSV---REDNRHVKRKVS 156
>ref|XP_006415185.1| hypothetical protein EUTSA_v10006650mg [Eutrema salsugineum]
gi|557092956|gb|ESQ33538.1| hypothetical protein
EUTSA_v10006650mg [Eutrema salsugineum]
Length = 1034
Score = 56.6 bits (135), Expect = 3e-06
Identities = 37/89 (41%), Positives = 48/89 (53%)
Frame = -1
Query: 319 LNPYQKQEREAAMLARKQRTYQLLXXXXXXXDIPAAKTNSSATIVSESKKQNSHKKRFRR 140
+N YQ++E EAAML RKQ+TY LL ++ K S+ SES+K + KKRFR+
Sbjct: 75 VNLYQQREEEAAMLVRKQKTYALLDADDDEDEVVVEKKPSA----SESRKSDKGKKRFRK 130
Query: 139 KXXXXXXXXXXDEVPPSREQDRQVKRKTS 53
K V RE +R VKRK S
Sbjct: 131 KSGQSDDSEDEVSV---REDNRHVKRKVS 156
>ref|XP_004236490.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX16-like [Solanum lycopersicum]
Length = 1050
Score = 56.6 bits (135), Expect = 3e-06
Identities = 35/88 (39%), Positives = 54/88 (61%)
Frame = -1
Query: 316 NPYQKQEREAAMLARKQRTYQLLXXXXXXXDIPAAKTNSSATIVSESKKQNSHKKRFRRK 137
N Y +QEREAAMLARKQ+TY LL +I + S+++ S+++K+++ K+FR++
Sbjct: 76 NLYLQQEREAAMLARKQKTYSLLEADDEDDNIVGVE---SSSVPSQTRKEDTRIKKFRKR 132
Query: 136 XXXXXXXXXXDEVPPSREQDRQVKRKTS 53
DEV E DR+V+R+TS
Sbjct: 133 --VETHGDEDDEVVKDEEDDRRVRRRTS 158
>gb|AAF81347.1|AC007767_27 Strong similarity to an unknown pre-mRNA splicing factor RNA
helicase At2g35340 gi|3608155 from Arabidopsis thaliana
BAC T32F12 gb|AC005314. ESTs gb|AV566249 and gb|AI998735
come from this gene [Arabidopsis thaliana]
Length = 1090
Score = 56.6 bits (135), Expect = 3e-06
Identities = 39/92 (42%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Frame = -1
Query: 319 LNPYQKQEREAAMLARKQRTYQLLXXXXXXXDIPAAKTNSSATIVSESKKQNSHKKRFRR 140
+N YQK E EAAML RKQ+TY LL ++ K +S VSES+K + KKRFR+
Sbjct: 75 VNLYQKHEAEAAMLVRKQKTYALLDADDDEDEVVVEKKSS----VSESRKSDKGKKRFRK 130
Query: 139 KXXXXXXXXXXDEVPPS---REQDRQVKRKTS 53
K E+P S E R V+RK S
Sbjct: 131 K--SGQSDESDGEIPISFFLNEDSRHVRRKVS 160
>ref|XP_006477633.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX16-like [Citrus sinensis]
Length = 1051
Score = 56.2 bits (134), Expect = 4e-06
Identities = 36/90 (40%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Frame = -1
Query: 319 LNPYQKQEREAAMLARKQRTYQLLXXXXXXXDI-PAAKTNSSATIVSESKKQNSHKKRFR 143
LN YQKQEREAA+L +KQ+TY +L D A + ++ SES+K KKRFR
Sbjct: 76 LNLYQKQEREAALLVKKQKTYTILDADDDADDNGGTAIVDDRPSVASESRKSTKEKKRFR 135
Query: 142 RKXXXXXXXXXXDEVPPSREQDRQVKRKTS 53
+K + ++ RQVKR+TS
Sbjct: 136 KKTGVEDDDDDEG-IARVEQEGRQVKRRTS 164