BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00018261
         (656 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004164787.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   160   4e-37
ref|XP_004149158.1| PREDICTED: DNA-directed RNA polymerase III s...   160   4e-37
gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora]       159   9e-37
gb|EOX91150.1| Transcription regulators,zinc ion binding, putati...   155   8e-36
gb|EOX91149.1| Transcription regulators,zinc ion binding, putati...   155   8e-36
gb|EOX91148.1| SIN-like family protein, putative isoform 1 [Theo...   155   8e-36
ref|XP_006279575.1| hypothetical protein CARUB_v10025904mg [Caps...   154   2e-35
ref|XP_002310208.2| hypothetical protein POPTR_0007s12540g [Popu...   154   3e-35
ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III s...   151   1e-34
emb|CBI17549.3| unnamed protein product [Vitis vinifera]              151   1e-34
emb|CAN60111.1| hypothetical protein VITISV_023619 [Vitis vinifera]   150   3e-34
gb|EXB77882.1| DNA-directed RNA polymerase III subunit RPC5 [Mor...   149   7e-34
ref|XP_006425717.1| hypothetical protein CICLE_v10025048mg [Citr...   145   1e-32
ref|XP_006425716.1| hypothetical protein CICLE_v10025048mg [Citr...   145   1e-32
ref|XP_006395054.1| hypothetical protein EUTSA_v10003751mg [Eutr...   144   3e-32
ref|XP_002863995.1| hypothetical protein ARALYDRAFT_495012 [Arab...   142   7e-32
ref|XP_002862665.1| hypothetical protein ARALYDRAFT_920409 [Arab...   142   7e-32
ref|NP_199764.1| SIN-like protein [Arabidopsis thaliana] gi|1017...   142   9e-32
ref|XP_004300617.1| PREDICTED: DNA-directed RNA polymerase III s...   142   1e-31
ref|XP_003611964.1| DNA-directed RNA polymerase III subunit RPC5...   141   1e-31

>ref|XP_004164787.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III
           subunit RPC5-like [Cucumis sativus]
          Length = 702

 Score =  160 bits (404), Expect = 4e-37
 Identities = 85/184 (46%), Positives = 118/184 (64%), Gaps = 1/184 (0%)
 Frame = -2

Query: 550 NSLSTATAKMDADEEFPVKNGVAVDLKEEDERAIAETSNDATMXXXXXXXXXXXXXXVAE 371
           +SL    AKMD + +  V+    VD    D+    + S D  +                E
Sbjct: 83  SSLPNGVAKMDVETKSEVEEDAMVD----DDPIEEDASEDMVVR---------------E 123

Query: 370 YDVYFTPR-DPTTQWYVLQYPLRPSWRPYELDQRCTEVRVNPNSGDMEVDLSIDTNSDNY 194
            DV FTP  D  ++ YVLQYPLRP WRPYE + RC EVRV P++G++EVDL++D  S+NY
Sbjct: 124 IDVLFTPSVDSNSKLYVLQYPLRPRWRPYEFEGRCDEVRVKPSTGEVEVDLNVDIESNNY 183

Query: 193 DSKSNAHGKMTKQILSSSTRLPVASSYAVGMLSGKKLYVNPVHAVVQLRPSMDHWDTGGS 14
           D+K++   +M KQ L+SS + P+A+SYAVG+L G KL++NPVHAVVQLRPS +H ++GG 
Sbjct: 184 DNKADGTFQMKKQTLTSSWQPPLATSYAVGLLMGNKLHLNPVHAVVQLRPSFEHLNSGGP 243

Query: 13  KKRN 2
           K++N
Sbjct: 244 KRKN 247


>ref|XP_004149158.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like
           [Cucumis sativus]
          Length = 702

 Score =  160 bits (404), Expect = 4e-37
 Identities = 85/184 (46%), Positives = 118/184 (64%), Gaps = 1/184 (0%)
 Frame = -2

Query: 550 NSLSTATAKMDADEEFPVKNGVAVDLKEEDERAIAETSNDATMXXXXXXXXXXXXXXVAE 371
           +SL    AKMD + +  V+    VD    D+    + S D  +                E
Sbjct: 83  SSLPNGVAKMDVETKSEVEEDAMVD----DDPIEEDASEDMVVR---------------E 123

Query: 370 YDVYFTPR-DPTTQWYVLQYPLRPSWRPYELDQRCTEVRVNPNSGDMEVDLSIDTNSDNY 194
            DV FTP  D  ++ YVLQYPLRP WRPYE + RC EVRV P++G++EVDL++D  S+NY
Sbjct: 124 IDVLFTPSVDSNSKLYVLQYPLRPRWRPYEFEGRCDEVRVKPSTGEVEVDLNVDIESNNY 183

Query: 193 DSKSNAHGKMTKQILSSSTRLPVASSYAVGMLSGKKLYVNPVHAVVQLRPSMDHWDTGGS 14
           D+K++   +M KQ L+SS + P+A+SYAVG+L G KL++NPVHAVVQLRPS +H ++GG 
Sbjct: 184 DNKADGTFQMKKQTLTSSWQPPLATSYAVGLLMGNKLHLNPVHAVVQLRPSFEHLNSGGP 243

Query: 13  KKRN 2
           K++N
Sbjct: 244 KRKN 247


>gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora]
          Length = 643

 Score =  159 bits (401), Expect = 9e-37
 Identities = 103/227 (45%), Positives = 126/227 (55%), Gaps = 10/227 (4%)
 Frame = -2

Query: 655 FAPKSSRFXXXXXXXXXXXXXXXXXPVIVKEEDDA------NSLSTATA-KMDADEEFPV 497
           FAPK S+F                  +  KEE D+      NS +TA A K +      V
Sbjct: 19  FAPKGSKFKPRTEPVAATSNS-----IAKKEELDSKPVSPINSSTTAAAGKAEDAASASV 73

Query: 496 KNGVA--VDLKEEDERAIAETSNDATMXXXXXXXXXXXXXXVAEYDVYFTPR-DPTTQWY 326
              VA  VD K E+E   AE   D  M                E DVY TP  DP T+ Y
Sbjct: 74  SQSVAMDVDAKVEEE---AEQPKDEPMESREEGEDEIVR----EIDVYLTPSIDPNTKLY 126

Query: 325 VLQYPLRPSWRPYELDQRCTEVRVNPNSGDMEVDLSIDTNSDNYDSKSNAHGKMTKQILS 146
           VLQYPLRP WRPYELD RC EVRV   S ++EVDL++D +S NYDS ++    MTKQ L+
Sbjct: 127 VLQYPLRPLWRPYELDDRCEEVRVKCKSAEVEVDLAVDVDSKNYDSDADPRVSMTKQTLT 186

Query: 145 SSTRLPVASSYAVGMLSGKKLYVNPVHAVVQLRPSMDHWDTGGSKKR 5
           SS + PV + YAVG+L G KL++NP+HAVVQLRPSM H+    SK+R
Sbjct: 187 SSWKPPVTAGYAVGVLVGNKLHLNPIHAVVQLRPSMQHYKPESSKRR 233


>gb|EOX91150.1| Transcription regulators,zinc ion binding, putative isoform 3
           [Theobroma cacao]
          Length = 736

 Score =  155 bits (393), Expect = 8e-36
 Identities = 77/125 (61%), Positives = 95/125 (76%), Gaps = 1/125 (0%)
 Frame = -2

Query: 373 EYDVYFTPR-DPTTQWYVLQYPLRPSWRPYELDQRCTEVRVNPNSGDMEVDLSIDTNSDN 197
           E DV+FTP  D  TQ YVLQYPLRP WRPYELD+RC EVRV P SG++E+DL++D +S+N
Sbjct: 124 EIDVFFTPSIDANTQLYVLQYPLRPCWRPYELDERCEEVRVKPASGEVEMDLAVDVDSNN 183

Query: 196 YDSKSNAHGKMTKQILSSSTRLPVASSYAVGMLSGKKLYVNPVHAVVQLRPSMDHWDTGG 17
           YDS+  +  KMTKQ LSSS   P  + YAVG+L G KL++NP+HAVVQLRPSM H     
Sbjct: 184 YDSERASRLKMTKQTLSSSWLPPRTTGYAVGVLMGDKLHLNPIHAVVQLRPSMCHLKPSV 243

Query: 16  SKKRN 2
           SK++N
Sbjct: 244 SKRKN 248


>gb|EOX91149.1| Transcription regulators,zinc ion binding, putative isoform 2
           [Theobroma cacao]
          Length = 588

 Score =  155 bits (393), Expect = 8e-36
 Identities = 77/125 (61%), Positives = 95/125 (76%), Gaps = 1/125 (0%)
 Frame = -2

Query: 373 EYDVYFTPR-DPTTQWYVLQYPLRPSWRPYELDQRCTEVRVNPNSGDMEVDLSIDTNSDN 197
           E DV+FTP  D  TQ YVLQYPLRP WRPYELD+RC EVRV P SG++E+DL++D +S+N
Sbjct: 27  EIDVFFTPSIDANTQLYVLQYPLRPCWRPYELDERCEEVRVKPASGEVEMDLAVDVDSNN 86

Query: 196 YDSKSNAHGKMTKQILSSSTRLPVASSYAVGMLSGKKLYVNPVHAVVQLRPSMDHWDTGG 17
           YDS+  +  KMTKQ LSSS   P  + YAVG+L G KL++NP+HAVVQLRPSM H     
Sbjct: 87  YDSERASRLKMTKQTLSSSWLPPRTTGYAVGVLMGDKLHLNPIHAVVQLRPSMCHLKPSV 146

Query: 16  SKKRN 2
           SK++N
Sbjct: 147 SKRKN 151


>gb|EOX91148.1| SIN-like family protein, putative isoform 1 [Theobroma cacao]
          Length = 700

 Score =  155 bits (393), Expect = 8e-36
 Identities = 77/125 (61%), Positives = 95/125 (76%), Gaps = 1/125 (0%)
 Frame = -2

Query: 373 EYDVYFTPR-DPTTQWYVLQYPLRPSWRPYELDQRCTEVRVNPNSGDMEVDLSIDTNSDN 197
           E DV+FTP  D  TQ YVLQYPLRP WRPYELD+RC EVRV P SG++E+DL++D +S+N
Sbjct: 124 EIDVFFTPSIDANTQLYVLQYPLRPCWRPYELDERCEEVRVKPASGEVEMDLAVDVDSNN 183

Query: 196 YDSKSNAHGKMTKQILSSSTRLPVASSYAVGMLSGKKLYVNPVHAVVQLRPSMDHWDTGG 17
           YDS+  +  KMTKQ LSSS   P  + YAVG+L G KL++NP+HAVVQLRPSM H     
Sbjct: 184 YDSERASRLKMTKQTLSSSWLPPRTTGYAVGVLMGDKLHLNPIHAVVQLRPSMCHLKPSV 243

Query: 16  SKKRN 2
           SK++N
Sbjct: 244 SKRKN 248


>ref|XP_006279575.1| hypothetical protein CARUB_v10025904mg [Capsella rubella]
           gi|482548279|gb|EOA12473.1| hypothetical protein
           CARUB_v10025904mg [Capsella rubella]
          Length = 800

 Score =  154 bits (390), Expect = 2e-35
 Identities = 89/195 (45%), Positives = 117/195 (60%), Gaps = 5/195 (2%)
 Frame = -2

Query: 574 IVKEEDDANSLSTATAKMDADEEFPVKNGVAVDLKEEDERAIAETS----NDATMXXXXX 407
           + K E D ++ ST T         PVK  + VD K + E  + ET     +   +     
Sbjct: 218 VSKSEHDVDAKSTGTKVEPEVYNGPVK--MEVDSKVDKEPEMTETDFIVEDQLPLQEEKE 275

Query: 406 XXXXXXXXXVAEYDVYFTPR-DPTTQWYVLQYPLRPSWRPYELDQRCTEVRVNPNSGDME 230
                    V E DV+F P  D  TQ YVLQYPLRPSWRPYE+D+RC EVRVNP++  +E
Sbjct: 276 EEEEEEDVVVREIDVFFKPSIDADTQLYVLQYPLRPSWRPYEMDERCEEVRVNPSTSQVE 335

Query: 229 VDLSIDTNSDNYDSKSNAHGKMTKQILSSSTRLPVASSYAVGMLSGKKLYVNPVHAVVQL 50
           +DLS+D +S NYDSK   +  +TKQ L ++ + P    YAVG+LSG KL++NPVHAV QL
Sbjct: 336 IDLSMDVHSKNYDSKFGVN--VTKQTLKTTWKQPPTLDYAVGVLSGDKLHLNPVHAVAQL 393

Query: 49  RPSMDHWDTGGSKKR 5
           RPSMD+  + G KK+
Sbjct: 394 RPSMDYLSSDGKKKK 408


>ref|XP_002310208.2| hypothetical protein POPTR_0007s12540g [Populus trichocarpa]
           gi|550334731|gb|EEE90658.2| hypothetical protein
           POPTR_0007s12540g [Populus trichocarpa]
          Length = 667

 Score =  154 bits (388), Expect = 3e-35
 Identities = 93/190 (48%), Positives = 118/190 (62%), Gaps = 6/190 (3%)
 Frame = -2

Query: 553 ANSLSTATAKMD---ADEEFPVKNG-VAVDLKEEDERAIAETSNDATMXXXXXXXXXXXX 386
           +N+   A  K+D   +  E  V NG V +++  ++ER  A   ND               
Sbjct: 53  SNTAEDAKPKIDDTLSKTETGVSNGNVKMEIDAKEERGAAVKENDLM---DVDKEEDEDD 109

Query: 385 XXVAEYDVYFTPR-DPTTQWYVLQYPLRPSWRPYELDQRCTEVRVNPNSGDMEVDLSIDT 209
             V E DVY+TP  DP TQ YV+QYPLRP WRPYELD+RC EVRV P S ++EVDLSID 
Sbjct: 110 VVVREIDVYYTPSVDPNTQLYVMQYPLRPCWRPYELDERCKEVRVKPESTEVEVDLSID- 168

Query: 208 NSDNYDSKSNAHGKMTKQILSSSTRLPVASSYAVGMLSGKKLYVNPVHAVVQLRPSMDHW 29
           ++ NYD    +   M KQ LSSS   P A+ YAVG+L G KL++NP+HAVVQLRPSMD+ 
Sbjct: 169 DTKNYDPDIASRLNMKKQTLSSSWSPPPATGYAVGVLIGNKLHLNPIHAVVQLRPSMDYL 228

Query: 28  DTGGSK-KRN 2
            +G SK K+N
Sbjct: 229 SSGNSKGKKN 238


>ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Vitis
           vinifera]
          Length = 672

 Score =  151 bits (382), Expect = 1e-34
 Identities = 92/199 (46%), Positives = 119/199 (59%), Gaps = 7/199 (3%)
 Frame = -2

Query: 577 VIVKEEDDANSLSTATAKMDADEEFP--VKNGVA---VDLKEEDERAIAETSNDATMXXX 413
           +I K+E+D    S       ADE F    +NGV    V+ K E E A+ E   D      
Sbjct: 49  LINKKEED----SQPPLVKKADEPFASSTQNGVIEMEVEAKAEVEDAMEEDDRDED---- 100

Query: 412 XXXXXXXXXXXVAEYDVYFTP--RDPTTQWYVLQYPLRPSWRPYELDQRCTEVRVNPNSG 239
                      V E DV+FTP   D  T+ YVLQYPLRP WRPYEL +RC EVRV P S 
Sbjct: 101 ---------PVVREIDVFFTPPPTDDNTKIYVLQYPLRPYWRPYELGERCDEVRVKPASA 151

Query: 238 DMEVDLSIDTNSDNYDSKSNAHGKMTKQILSSSTRLPVASSYAVGMLSGKKLYVNPVHAV 59
           ++EVDLSID +S NYD  +    +M KQ LS+S + P  + Y VG+L G KL++NP+HAV
Sbjct: 152 EVEVDLSIDVDSKNYDPDAPNAQRMKKQTLSTSWKPPQTTGYVVGVLMGNKLHLNPIHAV 211

Query: 58  VQLRPSMDHWDTGGSKKRN 2
           VQLRPSM++  +GG+K++N
Sbjct: 212 VQLRPSMEYLSSGGAKRKN 230


>emb|CBI17549.3| unnamed protein product [Vitis vinifera]
          Length = 688

 Score =  151 bits (382), Expect = 1e-34
 Identities = 92/199 (46%), Positives = 119/199 (59%), Gaps = 7/199 (3%)
 Frame = -2

Query: 577 VIVKEEDDANSLSTATAKMDADEEFP--VKNGVA---VDLKEEDERAIAETSNDATMXXX 413
           +I K+E+D    S       ADE F    +NGV    V+ K E E A+ E   D      
Sbjct: 49  LINKKEED----SQPPLVKKADEPFASSTQNGVIEMEVEAKAEVEDAMEEDDRDED---- 100

Query: 412 XXXXXXXXXXXVAEYDVYFTP--RDPTTQWYVLQYPLRPSWRPYELDQRCTEVRVNPNSG 239
                      V E DV+FTP   D  T+ YVLQYPLRP WRPYEL +RC EVRV P S 
Sbjct: 101 ---------PVVREIDVFFTPPPTDDNTKIYVLQYPLRPYWRPYELGERCDEVRVKPASA 151

Query: 238 DMEVDLSIDTNSDNYDSKSNAHGKMTKQILSSSTRLPVASSYAVGMLSGKKLYVNPVHAV 59
           ++EVDLSID +S NYD  +    +M KQ LS+S + P  + Y VG+L G KL++NP+HAV
Sbjct: 152 EVEVDLSIDVDSKNYDPDAPNAQRMKKQTLSTSWKPPQTTGYVVGVLMGNKLHLNPIHAV 211

Query: 58  VQLRPSMDHWDTGGSKKRN 2
           VQLRPSM++  +GG+K++N
Sbjct: 212 VQLRPSMEYLSSGGAKRKN 230


>emb|CAN60111.1| hypothetical protein VITISV_023619 [Vitis vinifera]
          Length = 282

 Score =  150 bits (379), Expect = 3e-34
 Identities = 92/199 (46%), Positives = 118/199 (59%), Gaps = 7/199 (3%)
 Frame = -2

Query: 577 VIVKEEDDANSLSTATAKMDADEEFP--VKNGVA---VDLKEEDERAIAETSNDATMXXX 413
           +I K+E+D    S       ADE F    +NGV    V+ K E E A+ E   D      
Sbjct: 49  LINKKEED----SQPPLVKKADEPFASSTQNGVIEMEVEAKAEVEDAMEEDDRDED---- 100

Query: 412 XXXXXXXXXXXVAEYDVYFTP--RDPTTQWYVLQYPLRPSWRPYELDQRCTEVRVNPNSG 239
                      V E DV+FTP   D  T+ YVLQYPLRP WRPYEL +RC EVRV P S 
Sbjct: 101 ---------PVVREIDVFFTPPPTDDNTKIYVLQYPLRPYWRPYELGERCDEVRVKPASA 151

Query: 238 DMEVDLSIDTNSDNYDSKSNAHGKMTKQILSSSTRLPVASSYAVGMLSGKKLYVNPVHAV 59
           ++EVDLSID +S NYD       +M KQ LS+S + P  + Y VG+L G KL++NP+HAV
Sbjct: 152 EVEVDLSIDVDSKNYDPDVPNAQRMKKQTLSTSWKPPQTTGYVVGVLMGNKLHLNPIHAV 211

Query: 58  VQLRPSMDHWDTGGSKKRN 2
           VQLRPSM++  +GG+K++N
Sbjct: 212 VQLRPSMEYLSSGGAKRKN 230


>gb|EXB77882.1| DNA-directed RNA polymerase III subunit RPC5 [Morus notabilis]
          Length = 732

 Score =  149 bits (376), Expect = 7e-34
 Identities = 83/185 (44%), Positives = 105/185 (56%), Gaps = 8/185 (4%)
 Frame = -2

Query: 532 TAKMDADEEFPVKNGVAVDLKEEDERAIAETSNDATMXXXXXXXXXXXXXXVAE------ 371
           TA     +EF  K    +D K + E    +   D+                 AE      
Sbjct: 53  TAPKPEPQEFEAKKEKEIDAKPKPENGFVKMEVDSAAGAKEEPEENDSMEVEAEEDMVVR 112

Query: 370 -YDVYFTPR-DPTTQWYVLQYPLRPSWRPYELDQRCTEVRVNPNSGDMEVDLSIDTNSDN 197
             DV+F P+ D  TQ YVLQYPLRPSWRPYELD+RC EVRV P S ++E+DLS+D +S N
Sbjct: 113 EIDVFFNPKIDEGTQLYVLQYPLRPSWRPYELDERCEEVRVKPASSEVEMDLSLDVDSKN 172

Query: 196 YDSKSNAHGKMTKQILSSSTRLPVASSYAVGMLSGKKLYVNPVHAVVQLRPSMDHWDTGG 17
           YD        MTKQ L  S   P A+ YAVG+L G KL++N +HAV+QLRPS+ H  + G
Sbjct: 173 YDPDCGDRLNMTKQTLCCSWDQPRATRYAVGVLMGNKLHLNRIHAVMQLRPSLKHLISAG 232

Query: 16  SKKRN 2
           SKK+N
Sbjct: 233 SKKKN 237


>ref|XP_006425717.1| hypothetical protein CICLE_v10025048mg [Citrus clementina]
           gi|568824759|ref|XP_006466762.1| PREDICTED: DNA-directed
           RNA polymerase III subunit RPC5-like [Citrus sinensis]
           gi|557527707|gb|ESR38957.1| hypothetical protein
           CICLE_v10025048mg [Citrus clementina]
          Length = 690

 Score =  145 bits (365), Expect = 1e-32
 Identities = 69/125 (55%), Positives = 95/125 (76%), Gaps = 1/125 (0%)
 Frame = -2

Query: 373 EYDVYFTPR-DPTTQWYVLQYPLRPSWRPYELDQRCTEVRVNPNSGDMEVDLSIDTNSDN 197
           E DV+FTP  D  ++ YV+QYPLRP WRPYELD+RC EVRV P++ ++E+DLSID +S+N
Sbjct: 116 EIDVFFTPSIDADSKLYVMQYPLRPLWRPYELDERCEEVRVKPSTSEVEMDLSIDVDSNN 175

Query: 196 YDSKSNAHGKMTKQILSSSTRLPVASSYAVGMLSGKKLYVNPVHAVVQLRPSMDHWDTGG 17
           +DS+  +   M KQ LS++   P A+ YA+G+L G KL++NP+HAVVQLR SM    +GG
Sbjct: 176 WDSEKASRLSMPKQTLSTTWMPPQATGYAIGVLIGNKLHLNPIHAVVQLRTSMGFLKSGG 235

Query: 16  SKKRN 2
           SK++N
Sbjct: 236 SKRKN 240


>ref|XP_006425716.1| hypothetical protein CICLE_v10025048mg [Citrus clementina]
           gi|557527706|gb|ESR38956.1| hypothetical protein
           CICLE_v10025048mg [Citrus clementina]
          Length = 637

 Score =  145 bits (365), Expect = 1e-32
 Identities = 69/125 (55%), Positives = 95/125 (76%), Gaps = 1/125 (0%)
 Frame = -2

Query: 373 EYDVYFTPR-DPTTQWYVLQYPLRPSWRPYELDQRCTEVRVNPNSGDMEVDLSIDTNSDN 197
           E DV+FTP  D  ++ YV+QYPLRP WRPYELD+RC EVRV P++ ++E+DLSID +S+N
Sbjct: 116 EIDVFFTPSIDADSKLYVMQYPLRPLWRPYELDERCEEVRVKPSTSEVEMDLSIDVDSNN 175

Query: 196 YDSKSNAHGKMTKQILSSSTRLPVASSYAVGMLSGKKLYVNPVHAVVQLRPSMDHWDTGG 17
           +DS+  +   M KQ LS++   P A+ YA+G+L G KL++NP+HAVVQLR SM    +GG
Sbjct: 176 WDSEKASRLSMPKQTLSTTWMPPQATGYAIGVLIGNKLHLNPIHAVVQLRTSMGFLKSGG 235

Query: 16  SKKRN 2
           SK++N
Sbjct: 236 SKRKN 240


>ref|XP_006395054.1| hypothetical protein EUTSA_v10003751mg [Eutrema salsugineum]
           gi|557091693|gb|ESQ32340.1| hypothetical protein
           EUTSA_v10003751mg [Eutrema salsugineum]
          Length = 682

 Score =  144 bits (362), Expect = 3e-32
 Identities = 71/125 (56%), Positives = 93/125 (74%), Gaps = 1/125 (0%)
 Frame = -2

Query: 373 EYDVYFTPR-DPTTQWYVLQYPLRPSWRPYELDQRCTEVRVNPNSGDMEVDLSIDTNSDN 197
           E DV+F P  D  T+ YVLQYPLRPSWRPYE+D+RC  VRVNP++  +E+DLS+D +S N
Sbjct: 117 EIDVFFNPSIDANTKLYVLQYPLRPSWRPYEMDERCEAVRVNPSTSQVEIDLSMDVHSRN 176

Query: 196 YDSKSNAHGKMTKQILSSSTRLPVASSYAVGMLSGKKLYVNPVHAVVQLRPSMDHWDTGG 17
           YDSK  +   MTKQ L+++ + P    YAVG+LSG KL++NPVHAV QLRPSM++     
Sbjct: 177 YDSKFGSELHMTKQTLTTTWKQPPTLDYAVGVLSGDKLHLNPVHAVAQLRPSMEYL---S 233

Query: 16  SKKRN 2
           SKK++
Sbjct: 234 SKKKH 238


>ref|XP_002863995.1| hypothetical protein ARALYDRAFT_495012 [Arabidopsis lyrata subsp.
           lyrata] gi|297309830|gb|EFH40254.1| hypothetical protein
           ARALYDRAFT_495012 [Arabidopsis lyrata subsp. lyrata]
          Length = 676

 Score =  142 bits (359), Expect = 7e-32
 Identities = 71/124 (57%), Positives = 90/124 (72%), Gaps = 1/124 (0%)
 Frame = -2

Query: 373 EYDVYFTPR-DPTTQWYVLQYPLRPSWRPYELDQRCTEVRVNPNSGDMEVDLSIDTNSDN 197
           E DV+F P  D  T+ YVLQYPLRPSWRPYE+D+RC EVRVN ++  +E+DLS+D +S N
Sbjct: 109 EIDVFFNPSFDANTKLYVLQYPLRPSWRPYEMDERCEEVRVNTSTSQVEIDLSMDVHSKN 168

Query: 196 YDSKSNAHGKMTKQILSSSTRLPVASSYAVGMLSGKKLYVNPVHAVVQLRPSMDHWDTGG 17
           YD  SN    MTKQ L ++ + P    YAVG+LSG KL++NPVHAV QLRPSM +  + G
Sbjct: 169 YD--SNFGLNMTKQTLKTTWKQPPTLDYAVGVLSGDKLHLNPVHAVAQLRPSMQYLSSNG 226

Query: 16  SKKR 5
            KK+
Sbjct: 227 KKKQ 230


>ref|XP_002862665.1| hypothetical protein ARALYDRAFT_920409 [Arabidopsis lyrata subsp.
           lyrata] gi|297308321|gb|EFH38923.1| hypothetical protein
           ARALYDRAFT_920409 [Arabidopsis lyrata subsp. lyrata]
          Length = 245

 Score =  142 bits (359), Expect = 7e-32
 Identities = 71/124 (57%), Positives = 90/124 (72%), Gaps = 1/124 (0%)
 Frame = -2

Query: 373 EYDVYFTPR-DPTTQWYVLQYPLRPSWRPYELDQRCTEVRVNPNSGDMEVDLSIDTNSDN 197
           E DV+F P  D  T+ YVLQYPLRPSWRPYE+D+RC EVRVN ++  +E+DLS+D +S N
Sbjct: 109 EIDVFFNPSFDANTKLYVLQYPLRPSWRPYEMDERCEEVRVNTSTSQVEIDLSMDVHSKN 168

Query: 196 YDSKSNAHGKMTKQILSSSTRLPVASSYAVGMLSGKKLYVNPVHAVVQLRPSMDHWDTGG 17
           YD  SN    MTKQ L ++ + P    YAVG+LSG KL++NPVHAV QLRPSM +  + G
Sbjct: 169 YD--SNFGLNMTKQTLKTTWKQPPTLDYAVGVLSGDKLHLNPVHAVAQLRPSMQYLSSNG 226

Query: 16  SKKR 5
            KK+
Sbjct: 227 KKKQ 230


>ref|NP_199764.1| SIN-like protein [Arabidopsis thaliana] gi|10177619|dbj|BAB10766.1|
           unnamed protein product [Arabidopsis thaliana]
           gi|332008443|gb|AED95826.1| SIN-like protein
           [Arabidopsis thaliana]
          Length = 689

 Score =  142 bits (358), Expect = 9e-32
 Identities = 72/124 (58%), Positives = 89/124 (71%), Gaps = 1/124 (0%)
 Frame = -2

Query: 373 EYDVYFTPR-DPTTQWYVLQYPLRPSWRPYELDQRCTEVRVNPNSGDMEVDLSIDTNSDN 197
           E DV+F P  D  TQ YVLQYPLRPSWRPYE+D+RC EVRVNP++  +E+DLS+D +S N
Sbjct: 121 EIDVFFKPSIDANTQLYVLQYPLRPSWRPYEMDERCEEVRVNPSTSQVEIDLSMDVHSKN 180

Query: 196 YDSKSNAHGKMTKQILSSSTRLPVASSYAVGMLSGKKLYVNPVHAVVQLRPSMDHWDTGG 17
           YD  SN    MTKQ L ++ + P    YAVG+LSG KL++NPVHAV QLRPSM    +  
Sbjct: 181 YD--SNFGLNMTKQTLKTTWKQPPTLDYAVGVLSGDKLHLNPVHAVAQLRPSMQSLSSDK 238

Query: 16  SKKR 5
            KK+
Sbjct: 239 KKKQ 242


>ref|XP_004300617.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like
           [Fragaria vesca subsp. vesca]
          Length = 685

 Score =  142 bits (357), Expect = 1e-31
 Identities = 71/124 (57%), Positives = 88/124 (70%), Gaps = 1/124 (0%)
 Frame = -2

Query: 373 EYDVYFTPR-DPTTQWYVLQYPLRPSWRPYELDQRCTEVRVNPNSGDMEVDLSIDTNSDN 197
           E DV+F P  D  TQ YVLQYPLRP WRPYEL+ RC E+RV P + ++EVDLSID  S N
Sbjct: 112 EIDVFFNPNVDSNTQLYVLQYPLRPRWRPYELEDRCEEIRVKPGTAEVEVDLSIDLYSKN 171

Query: 196 YDSKSNAHGKMTKQILSSSTRLPVASSYAVGMLSGKKLYVNPVHAVVQLRPSMDHWDTGG 17
            D +     KMTKQ L++      ++ YAVG+L G KL++NPVHAVVQLRPS+DH   GG
Sbjct: 172 CDQEFANRLKMTKQTLATEWDPCRSTGYAVGVLMGNKLHLNPVHAVVQLRPSLDHLKPGG 231

Query: 16  SKKR 5
           SK++
Sbjct: 232 SKRK 235


>ref|XP_003611964.1| DNA-directed RNA polymerase III subunit RPC5 [Medicago truncatula]
           gi|358344405|ref|XP_003636280.1| DNA-directed RNA
           polymerase III subunit RPC5 [Medicago truncatula]
           gi|355502215|gb|AES83418.1| DNA-directed RNA polymerase
           III subunit RPC5 [Medicago truncatula]
           gi|355513299|gb|AES94922.1| DNA-directed RNA polymerase
           III subunit RPC5 [Medicago truncatula]
          Length = 683

 Score =  141 bits (356), Expect = 1e-31
 Identities = 87/226 (38%), Positives = 119/226 (52%), Gaps = 8/226 (3%)
 Frame = -2

Query: 655 FAPKSSRFXXXXXXXXXXXXXXXXXPVIVKEEDDANSLSTAT-------AKMDADEEFPV 497
           FAPKSS+F                     K E     L+  T       A +  D E  +
Sbjct: 17  FAPKSSKFKPKKEEPSLVPKSEPPPLASAKTEPQEIDLTAPTPVKHEPNASVKTDAESKI 76

Query: 496 KNGVAVDLKEEDERAIAETSNDATMXXXXXXXXXXXXXXVAEYDVYFTPR-DPTTQWYVL 320
           +  V       D R +     +A                V E DVYF+P  D  T+ YV+
Sbjct: 77  EGKV-------DSRNVDVEMTEAVDGSREVNPMDEEDTVVREIDVYFSPSIDNDTKLYVM 129

Query: 319 QYPLRPSWRPYELDQRCTEVRVNPNSGDMEVDLSIDTNSDNYDSKSNAHGKMTKQILSSS 140
           QYPLRPSWRPY+LD++C EVR+ P + ++EVDLSID  S N +  +    K TKQ LS++
Sbjct: 130 QYPLRPSWRPYDLDEQCEEVRLKPGTSEVEVDLSIDLESYNVEKATADKLKYTKQTLSTT 189

Query: 139 TRLPVASSYAVGMLSGKKLYVNPVHAVVQLRPSMDHWDTGGSKKRN 2
            + P A+  AVG+L G KL+++P+HAVVQLRPS  + D+GGS+K+N
Sbjct: 190 WKPPPANGCAVGLLMGDKLHLHPIHAVVQLRPSRHYLDSGGSEKKN 235