BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00017955
         (2069 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor rpoD ...   633   e-178
gb|EMJ20209.1| hypothetical protein PRUPE_ppa004259mg [Prunus pe...   619   e-174
ref|XP_004308009.1| PREDICTED: RNA polymerase sigma factor sigE,...   618   e-174
gb|EOY23460.1| Sigma factor E isoform 1 [Theobroma cacao] gi|508...   613   e-173
gb|EXB72455.1| RNA polymerase sigma factor rpoD [Morus notabilis]     598   e-168
ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,...   595   e-167
ref|XP_004234179.1| PREDICTED: RNA polymerase sigma factor sigE,...   580   e-163
ref|XP_006422121.1| hypothetical protein CICLE_v10004760mg [Citr...   580   e-162
ref|XP_004166500.1| PREDICTED: RNA polymerase sigma factor sigE,...   579   e-162
ref|XP_003541542.1| PREDICTED: RNA polymerase sigma factor sigE,...   578   e-162
ref|XP_004149458.1| PREDICTED: RNA polymerase sigma factor sigE,...   577   e-162
ref|XP_002331841.1| predicted protein [Populus trichocarpa]           575   e-161
ref|XP_002513587.1| RNA polymerase sigma factor rpoD, putative [...   571   e-160
ref|NP_001254001.1| RNA polymerase sigma factor rpoD-like [Glyci...   568   e-159
ref|XP_006376620.1| RNA polymerase sigma subunit SigE family pro...   567   e-159
ref|XP_002333134.1| predicted protein [Populus trichocarpa]           567   e-159
ref|XP_006581623.1| PREDICTED: RNA polymerase sigma factor sigE,...   559   e-156
ref|XP_006593758.1| PREDICTED: RNA polymerase sigma factor sigE,...   556   e-155
ref|NP_001276145.1| RNA polymerase sigma factor sigE, chloroplas...   556   e-155
ref|XP_006578934.1| PREDICTED: RNA polymerase sigma factor sigE,...   556   e-155

>ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
            gi|302143685|emb|CBI22546.3| unnamed protein product
            [Vitis vinifera]
          Length = 518

 Score =  633 bits (1632), Expect = e-178
 Identities = 328/493 (66%), Positives = 387/493 (78%), Gaps = 1/493 (0%)
 Frame = +1

Query: 214  HQSSIKGPLILGFKVDKNKKSALVAVSEPSRLRVETKKENHKRVRSVTKPSKGVRVASVA 393
            HQ+ ++ PL+L FK DK K  ALV   EP  L +ET K++ KR+R  +KPSK V+  S  
Sbjct: 26   HQTPLRRPLVLAFKADKAKNIALVTPHEPIPLPIETSKDHKKRLRRASKPSKRVKAVSTD 85

Query: 394  EASPYAVELDLNEAAAKLESIFKRSPSTDALDLENIDQTLKEKRGKRKKSTEVDEKKEKR 573
            E SP +VELD NEAAAKLE+I+K SP+TD  + E++++ ++  R +RK+ T  D+K EK 
Sbjct: 86   EVSPCSVELDYNEAAAKLENIYKLSPATDVSEAEDLERVVRRGRQRRKRVTLADDKAEKE 145

Query: 574  I-DRIVTNKNRKSKRLSLAKRIXXXXXXXXXXXXAVFLAEKKRTVKNENVKIDELVREYS 750
            + D +V   N+K KRLSL KRI            AV   +KKR  KNE+  ID LVREYS
Sbjct: 146  VSDNVVRIHNKKPKRLSLEKRIALSKMKQEK---AVASIQKKRDSKNEDENIDVLVREYS 202

Query: 751  ASTDLVSLDWKKMKIPPVLPSSEHTWLFKLMEQMKALNQVKENLRTELGRDPTDHELGEA 930
            ASTDLVSLDWKKMKIPPVLP SEH WLFKLM+ MK L +VK+NL+ +LGR+PTD EL EA
Sbjct: 203  ASTDLVSLDWKKMKIPPVLPPSEHAWLFKLMQPMKGLLEVKDNLQKDLGREPTDGELAEA 262

Query: 931  MNMTIVQVRRHLEVGHAARNKLIKHNLRLVLFVMNKYFQDFTNGPRFQDLCQAGVKGLII 1110
            M+M+ VQVRRH+EVG AARNKLIKHNLRLVLFV+NKYFQ+F NGP+FQDLCQAGVKGLI 
Sbjct: 263  MSMSAVQVRRHMEVGQAARNKLIKHNLRLVLFVINKYFQEFANGPKFQDLCQAGVKGLIT 322

Query: 1111 AIDRFESRRKFRLSTYALFWIRHAIIRSMTVSSFTRVSFGLESVRVEIQKAKLELMFELK 1290
            AIDRFE +R FRLSTY LFWIRHAI+RSMT+SSFTRVSFGLESVRVEIQ+AKLEL+F+L+
Sbjct: 323  AIDRFEPKRSFRLSTYGLFWIRHAIMRSMTLSSFTRVSFGLESVRVEIQRAKLELLFKLQ 382

Query: 1291 RMPTEEEILERVGISAERYQDVMRASNSVSSLHSRHQVTQEELINGIVDVDGVGSDNQRQ 1470
            R+PTEEEI+E+VGIS ERY +VMRAS SV SLH+RH  TQEE INGI DV+GVG D  RQ
Sbjct: 383  RLPTEEEIIEKVGISPERYHEVMRASKSVLSLHARHATTQEEYINGITDVEGVGGDRGRQ 442

Query: 1471 PAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEMKALM 1650
             A             KPKESLV+RQRYGLDGKGDRTLGEIAGNL+ISREMVRKHE+KALM
Sbjct: 443  LALLRLALDDVLDSLKPKESLVMRQRYGLDGKGDRTLGEIAGNLSISREMVRKHEVKALM 502

Query: 1651 KLKHPTRVDYLQR 1689
            KLKHP RVDYL++
Sbjct: 503  KLKHPARVDYLRQ 515


>gb|EMJ20209.1| hypothetical protein PRUPE_ppa004259mg [Prunus persica]
          Length = 519

 Score =  619 bits (1597), Expect = e-174
 Identities = 320/496 (64%), Positives = 389/496 (78%), Gaps = 3/496 (0%)
 Frame = +1

Query: 211  VHQSSIKGPLILGFKVDKNKKSALVAVSEPSRLRVETKKENHKRVRSVTKPSKGVRVASV 390
            + +S+++ PLI+ FK D+  K+ALVA  E   L +ET+K++ KR+    K +K V+ A+ 
Sbjct: 23   IQRSTLRKPLIVAFKTDEANKTALVAPQEKIPLPIETRKKHQKRLGKARKLAKSVKSATT 82

Query: 391  AEASPYAVELDLNEAAAKLESIFKRSPSTDA-LDLENIDQTLKEKRGKRKKSTEVDEKKE 567
              ASP  +E+D NEAAAKLE+++KRSP T+A  D+E++D  ++  R +RKK++E D  K+
Sbjct: 83   DVASPCTLEVDYNEAAAKLENLYKRSPETEANSDVEDVDGLMRRGRKRRKKTSESDADKD 142

Query: 568  KR--IDRIVTNKNRKSKRLSLAKRIXXXXXXXXXXXXAVFLAEKKRTVKNENVKIDELVR 741
            +    + +V N+ +K+KRLSL KR+            ++    K+++ KNEN KI+ELVR
Sbjct: 143  ENRTSNTVVRNRTKKAKRLSLNKRVALKWNKDEKVISSI--VRKRKSRKNENEKIEELVR 200

Query: 742  EYSASTDLVSLDWKKMKIPPVLPSSEHTWLFKLMEQMKALNQVKENLRTELGRDPTDHEL 921
            EYS STDLVSLDWKKMKIPPVL SSEH WLFKLM+ MK L +VKENL+ +LGR+PT+ EL
Sbjct: 201  EYSTSTDLVSLDWKKMKIPPVLTSSEHAWLFKLMQPMKGLLEVKENLQKDLGREPTNGEL 260

Query: 922  GEAMNMTIVQVRRHLEVGHAARNKLIKHNLRLVLFVMNKYFQDFTNGPRFQDLCQAGVKG 1101
             EA NM++VQV++HLEVG AAR+KLIKHNLRLVLFVMNKYFQDF NGP+FQDLCQAGVKG
Sbjct: 261  AEATNMSVVQVKKHLEVGRAARSKLIKHNLRLVLFVMNKYFQDFANGPKFQDLCQAGVKG 320

Query: 1102 LIIAIDRFESRRKFRLSTYALFWIRHAIIRSMTVSSFTRVSFGLESVRVEIQKAKLELMF 1281
            LI AIDRFE +R FRLSTY LFWIRHAIIRSMT+SSFTRVSFGLESVR EIQKAKL ++F
Sbjct: 321  LITAIDRFEPKRSFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLESVRAEIQKAKLGMLF 380

Query: 1282 ELKRMPTEEEILERVGISAERYQDVMRASNSVSSLHSRHQVTQEELINGIVDVDGVGSDN 1461
             LKRMPTE+EI+E+VGIS ERY +VMRAS  V SLHSRH  TQEE INGI DVDGV  DN
Sbjct: 381  ALKRMPTEDEIIEKVGISPERYHEVMRASKPVFSLHSRHTTTQEEFINGITDVDGVEGDN 440

Query: 1462 QRQPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEMK 1641
            +++PA             KPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHE+K
Sbjct: 441  RQKPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVK 500

Query: 1642 ALMKLKHPTRVDYLQR 1689
            ALMKLKHP RVDYL+R
Sbjct: 501  ALMKLKHPARVDYLRR 516


>ref|XP_004308009.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Fragaria vesca subsp.
            vesca]
          Length = 520

 Score =  618 bits (1593), Expect = e-174
 Identities = 325/497 (65%), Positives = 387/497 (77%), Gaps = 3/497 (0%)
 Frame = +1

Query: 217  QSSIKGPLILGFKVDKNKKSALVAVSEPSRLRVETKKENHKRVRSVTKPSKGVRVASVAE 396
            +S+++ PLI+ F+ DK+ K ALVA  E   L +ET K+  KR+    K  K V+ A + E
Sbjct: 26   RSTLRKPLIVAFRTDKSDKKALVAPQEKVPLPIETGKKVQKRLGKARKLPKSVKAALIEE 85

Query: 397  ASPYAVELDLNEAAAKLESIFKRSPSTDALDLENIDQTL-KEKRGKRKKSTEVDEKKEKR 573
            A    +ELD NEAAAKLE+++KRSP T+A D+EN+D  + K  R +RKK +EVD+K EKR
Sbjct: 86   APTCDLELDYNEAAAKLENLYKRSPETEASDVENVDGLMIKRGRKRRKKISEVDDKVEKR 145

Query: 574  I--DRIVTNKNRKSKRLSLAKRIXXXXXXXXXXXXAVFLAEKKRTVKNENVKIDELVREY 747
               D +V +  +K+KRLSL KR+            +V    K++  ++EN  ++ELVREY
Sbjct: 146  TSDDIVVRSVTKKAKRLSLDKRVALKWNKDEKVAASV--VRKRKDKRSENEMMEELVREY 203

Query: 748  SASTDLVSLDWKKMKIPPVLPSSEHTWLFKLMEQMKALNQVKENLRTELGRDPTDHELGE 927
            SASTDLVSLDWKKM+IPPVL SSEHTWLFKLM+ MK L +VKE L+ +LGR+P   EL E
Sbjct: 204  SASTDLVSLDWKKMRIPPVLSSSEHTWLFKLMQPMKGLLEVKEILQKDLGREPNKGELAE 263

Query: 928  AMNMTIVQVRRHLEVGHAARNKLIKHNLRLVLFVMNKYFQDFTNGPRFQDLCQAGVKGLI 1107
            A NMT+VQV+RHLEVG AARNKLIKHNLRLVLFV+NKYFQDF NGP+FQDLCQAGVKGLI
Sbjct: 264  ATNMTVVQVKRHLEVGRAARNKLIKHNLRLVLFVINKYFQDFANGPKFQDLCQAGVKGLI 323

Query: 1108 IAIDRFESRRKFRLSTYALFWIRHAIIRSMTVSSFTRVSFGLESVRVEIQKAKLELMFEL 1287
             AIDRFE +R+FRLSTY LFWIRHAIIRSMT+SSFTRVSFGLESVR EIQKAKLE++ +L
Sbjct: 324  TAIDRFEPQRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLESVRAEIQKAKLEMLVQL 383

Query: 1288 KRMPTEEEILERVGISAERYQDVMRASNSVSSLHSRHQVTQEELINGIVDVDGVGSDNQR 1467
            KRMPTE+EI+E+VGIS ERY +VMRAS  V SL+SRH VTQEE INGI DVDGV  DN+R
Sbjct: 384  KRMPTEDEIIEKVGISPERYHEVMRASKPVFSLNSRHSVTQEEFINGITDVDGVDGDNRR 443

Query: 1468 QPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEMKAL 1647
            +PA             KPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHE+KAL
Sbjct: 444  KPALLRLAIDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKAL 503

Query: 1648 MKLKHPTRVDYLQRRLL 1698
            MKLKHP RVDYL+R ++
Sbjct: 504  MKLKHPARVDYLRRYIV 520


>gb|EOY23460.1| Sigma factor E isoform 1 [Theobroma cacao]
            gi|508776205|gb|EOY23461.1| Sigma factor E isoform 1
            [Theobroma cacao]
          Length = 516

 Score =  613 bits (1581), Expect = e-173
 Identities = 323/486 (66%), Positives = 375/486 (77%), Gaps = 1/486 (0%)
 Frame = +1

Query: 235  PLILGFKVDKNKKSALVAVSEPSRLRVETKKENHKRVRSVTKPSKGVRVASVAEASPYAV 414
            PL + FK DK+  +ALV   E   L +ET KE+ KR     K  K V      + SP  +
Sbjct: 31   PLTVAFKADKSDNTALVTPQEHILLPIETAKEHPKRRGKAKKDPKIVNHVFTDDGSPCTL 90

Query: 415  ELDLNEAAAKLESIFKRSPSTDALDLENIDQTLKEKRGKRKKSTEVDEKKEKRIDRIVT- 591
            E+D NEAAAKLE+I+K SP+T + D+E ++  +K +R +RK+S E DEK     D+IV  
Sbjct: 91   EVDYNEAAAKLENIYKLSPATRSSDVEEVEGKIKGRRQRRKRSKESDEKGVNSNDQIVVR 150

Query: 592  NKNRKSKRLSLAKRIXXXXXXXXXXXXAVFLAEKKRTVKNENVKIDELVREYSASTDLVS 771
            N+  + KRLSL  RI            +V    +K++ +NE+ KID LVR+YSASTDLVS
Sbjct: 151  NQTNRIKRLSLDNRIALKKNREEKPVVSV---RRKKSSENESEKIDRLVRDYSASTDLVS 207

Query: 772  LDWKKMKIPPVLPSSEHTWLFKLMEQMKALNQVKENLRTELGRDPTDHELGEAMNMTIVQ 951
            LDW+KMKIPPVLPS EHTWLFKLM+ MKAL Q KENL+ +LGRDPT+ EL EA NM+  Q
Sbjct: 208  LDWRKMKIPPVLPSIEHTWLFKLMQPMKALLQAKENLQKDLGRDPTEDELAEATNMSAAQ 267

Query: 952  VRRHLEVGHAARNKLIKHNLRLVLFVMNKYFQDFTNGPRFQDLCQAGVKGLIIAIDRFES 1131
            VR+HLEVG AARNKLIKHNLRLVLF +NKYFQDF NGPRFQDLCQAGVKGLI AIDRFE 
Sbjct: 268  VRKHLEVGQAARNKLIKHNLRLVLFSINKYFQDFANGPRFQDLCQAGVKGLITAIDRFEP 327

Query: 1132 RRKFRLSTYALFWIRHAIIRSMTVSSFTRVSFGLESVRVEIQKAKLELMFELKRMPTEEE 1311
            RR+FRLSTY+LFWIRHAIIRSMT+SSFTRVSFGLESVRVEIQ+AKLEL+FEL R PTEEE
Sbjct: 328  RRRFRLSTYSLFWIRHAIIRSMTLSSFTRVSFGLESVRVEIQRAKLELLFELHREPTEEE 387

Query: 1312 ILERVGISAERYQDVMRASNSVSSLHSRHQVTQEELINGIVDVDGVGSDNQRQPAXXXXX 1491
            I+++VGIS ERYQ+VMRAS  V+SLHSRH VTQEE INGI D+DGVG D++RQPA     
Sbjct: 388  IIKKVGISPERYQEVMRASKPVASLHSRHSVTQEEFINGITDIDGVGGDHRRQPALLRLA 447

Query: 1492 XXXXXXXXKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEMKALMKLKHPTR 1671
                    KPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHE+KALMKLKHP R
Sbjct: 448  LDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPAR 507

Query: 1672 VDYLQR 1689
            VDYL+R
Sbjct: 508  VDYLRR 513


>gb|EXB72455.1| RNA polymerase sigma factor rpoD [Morus notabilis]
          Length = 517

 Score =  598 bits (1543), Expect = e-168
 Identities = 323/499 (64%), Positives = 375/499 (75%), Gaps = 6/499 (1%)
 Frame = +1

Query: 220  SSIKGPLILGFKVDKNKKSALVAVSEPSRLRVETKKENHKRVRSVTKPSKGVRVASVAEA 399
            S +K PLI+ FK DK+ K+ LVA  +   L VET+KE   RV    K S  V+  +  EA
Sbjct: 27   SVLKKPLIVAFKGDKSNKTVLVAPQDQIILPVETRKEVKSRVGKAKKSSNRVKAVATDEA 86

Query: 400  SPYAVELDLNEAAAKLESIFKRSPSTDALDLENIDQTLKEKRGKRKKSTEVDE------K 561
            S   +E+D NEAAAKLE+IFK S S D  D   +       RG+R++S  + E      K
Sbjct: 87   STSTMEVDYNEAAAKLENIFKLS-SADVEDAVGLTS-----RGRRRRSKVIGESDERAGK 140

Query: 562  KEKRIDRIVTNKNRKSKRLSLAKRIXXXXXXXXXXXXAVFLAEKKRTVKNENVKIDELVR 741
            K    D +V N+ +K+KRLSL KR+            AV L  K+R   NE  KI++LVR
Sbjct: 141  KSTTSDTVVRNRKKKAKRLSLHKRVELKRDKEENV--AVVLVRKRRESLNEEEKIEKLVR 198

Query: 742  EYSASTDLVSLDWKKMKIPPVLPSSEHTWLFKLMEQMKALNQVKENLRTELGRDPTDHEL 921
            EYSASTDLVSLDWKKMKIPPVLPSSEHTWLFKLM+ +K L QV E+L+  LGR+PT++EL
Sbjct: 199  EYSASTDLVSLDWKKMKIPPVLPSSEHTWLFKLMQPLKQLFQVGEDLQKTLGREPTENEL 258

Query: 922  GEAMNMTIVQVRRHLEVGHAARNKLIKHNLRLVLFVMNKYFQDFTNGPRFQDLCQAGVKG 1101
             EA N+++VQV+RHLE G AARNKLIKHNLRLVLFVMNKYFQDFTNGP+FQDLCQAGV+G
Sbjct: 259  AEATNISVVQVKRHLEAGRAARNKLIKHNLRLVLFVMNKYFQDFTNGPKFQDLCQAGVRG 318

Query: 1102 LIIAIDRFESRRKFRLSTYALFWIRHAIIRSMTVSSFTRVSFGLESVRVEIQKAKLELMF 1281
            LI AIDRFE +R+FRLSTY LFWIRHAIIRSMTVSSFTRVSFGLESVR EIQKAK+EL F
Sbjct: 319  LITAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTVSSFTRVSFGLESVRAEIQKAKIELTF 378

Query: 1282 ELKRMPTEEEILERVGISAERYQDVMRASNSVSSLHSRHQVTQEELINGIVDVDGVGSDN 1461
            ELKR+PTEEEI+E+VGIS ERY +VMRAS  V SL+SRH  TQEE IN I DVDGV  D+
Sbjct: 379  ELKRLPTEEEIIEKVGISPERYHEVMRASKPVISLNSRHVTTQEEFINAITDVDGVDGDD 438

Query: 1462 QRQPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEMK 1641
            +R+PA             KPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHE+K
Sbjct: 439  RRKPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVK 498

Query: 1642 ALMKLKHPTRVDYLQRRLL 1698
            ALMKLKHP RVDYL+R ++
Sbjct: 499  ALMKLKHPARVDYLRRYMV 517


>ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Solanum tuberosum]
          Length = 516

 Score =  595 bits (1534), Expect = e-167
 Identities = 314/491 (63%), Positives = 375/491 (76%), Gaps = 3/491 (0%)
 Frame = +1

Query: 226  IKGPLILGFKVDKNKKSALVAVSEPSRLRVETKKENHKRVRSVTKPSKGVRVASVAEASP 405
            +K P+I+ FK DK K + L+A  E   L +ET KEN KR R V+K S+ V   ++ EASP
Sbjct: 28   LKRPVIVSFKKDKTKNTTLIAPKESISLSIETSKENEKRSRRVSKRSERVHAVAI-EASP 86

Query: 406  YAVELDLNEAAAKLESIFKRSPSTDALDLENIDQTLKEKRGKRKKSTEVDEKKEKRI-DR 582
              +ELD +EAAAKLESI+KRS  T + + E  D  +K +   RK+  E DE+ +K + D 
Sbjct: 87   STLELDYSEAAAKLESIYKRSLETASSNTEVQDHLVKRRPRTRKRIVEGDEEAKKEVADN 146

Query: 583  IVTNKNRKSKRLSLAKRIXXXXXXXXXXXXAVFLAEKKRTVKN--ENVKIDELVREYSAS 756
            +V N+ + SKRL+L +RI             +  + ++R +K   E+ KID+LVREYS +
Sbjct: 147  VVKNRRKTSKRLNLDQRIALLKNKEGE----MVASSERRKLKEDTEDEKIDKLVREYSGA 202

Query: 757  TDLVSLDWKKMKIPPVLPSSEHTWLFKLMEQMKALNQVKENLRTELGRDPTDHELGEAMN 936
            TDL SLDWKKMKIPPVLPSSEH WLFKLM+ MKA+ QVKENL+ +LGR+PTD E+ EA N
Sbjct: 203  TDLASLDWKKMKIPPVLPSSEHVWLFKLMQPMKAILQVKENLQNDLGREPTDGEVAEATN 262

Query: 937  MTIVQVRRHLEVGHAARNKLIKHNLRLVLFVMNKYFQDFTNGPRFQDLCQAGVKGLIIAI 1116
            M   ++R+ LEVG AARNKLIKHNLRLVLFVMNKYFQDF NG RFQDLCQAGVKGLI AI
Sbjct: 263  MDASELRKKLEVGRAARNKLIKHNLRLVLFVMNKYFQDFANGSRFQDLCQAGVKGLITAI 322

Query: 1117 DRFESRRKFRLSTYALFWIRHAIIRSMTVSSFTRVSFGLESVRVEIQKAKLELMFELKRM 1296
            DRFE  RKFRLSTY LFWIRHAIIRSMT SSFT+V FGLES+RVEIQKAKLEL+FEL+R+
Sbjct: 323  DRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTKVPFGLESIRVEIQKAKLELLFELQRI 382

Query: 1297 PTEEEILERVGISAERYQDVMRASNSVSSLHSRHQVTQEELINGIVDVDGVGSDNQRQPA 1476
            PT+EEI+ RVG+S ERY +VM+ S  VSSLH+R++ TQEELINGI DVDGV  D ++QPA
Sbjct: 383  PTDEEIIRRVGLSPERYHEVMKVSKPVSSLHARNKTTQEELINGITDVDGVDGDKRKQPA 442

Query: 1477 XXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEMKALMKL 1656
                         KPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHE+KALMKL
Sbjct: 443  LLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKL 502

Query: 1657 KHPTRVDYLQR 1689
            KHPTRVDY++R
Sbjct: 503  KHPTRVDYVRR 513


>ref|XP_004234179.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform 1 [Solanum
            lycopersicum]
          Length = 516

 Score =  580 bits (1495), Expect = e-163
 Identities = 308/492 (62%), Positives = 368/492 (74%), Gaps = 4/492 (0%)
 Frame = +1

Query: 226  IKGPLILGFKVDKNKKSALVAVSEPSRLRVETKKENHKRVRSVTKPSKGVRVASVAEASP 405
            +K P+I+ FK D  K + LV+  E     +ET KEN KR R V+K ++ V   ++ EA P
Sbjct: 28   LKRPVIVSFKKDITKNTTLVSPKESISSPIETSKENEKRSRRVSKRTERVHAVTI-EAPP 86

Query: 406  YAVELDLNEAAAKLESIFKRSPSTDALDLENIDQTLKEKRGKRKKSTEVDEKKEKRI-DR 582
              +ELD +EAAAKLESI+KRS  T + + E  D  +K +   RK+  E DE+ +K + D 
Sbjct: 87   STLELDYSEAAAKLESIYKRSLETASPNTEVKDHLVKRRPRTRKRIVESDEEAKKEVVDN 146

Query: 583  IVTNKNRKSKRLSLAKRIXXXXXXXXXXXXAVFLAEKKRTVKNENV---KIDELVREYSA 753
            +V N+ +KSKRL+L +RI               LA  +R   NE+    KID+LVREYS 
Sbjct: 147  VVKNRRKKSKRLNLDQRIALLKNKEGK-----MLASSERRKLNEDTEDEKIDKLVREYSG 201

Query: 754  STDLVSLDWKKMKIPPVLPSSEHTWLFKLMEQMKALNQVKENLRTELGRDPTDHELGEAM 933
            +TDL SLDWKKMKIPPVLPSSEHTWLFKLM+ MKA+ QVKENL+ +LGR+PTD E+ EA 
Sbjct: 202  ATDLASLDWKKMKIPPVLPSSEHTWLFKLMQPMKAILQVKENLQNDLGREPTDGEVAEAT 261

Query: 934  NMTIVQVRRHLEVGHAARNKLIKHNLRLVLFVMNKYFQDFTNGPRFQDLCQAGVKGLIIA 1113
            NM   ++R+ LE G AARNKLIKHNLRLVLFVMNKYFQDF N  RFQDLCQAGVKGLI A
Sbjct: 262  NMDASELRKKLEAGRAARNKLIKHNLRLVLFVMNKYFQDFANASRFQDLCQAGVKGLITA 321

Query: 1114 IDRFESRRKFRLSTYALFWIRHAIIRSMTVSSFTRVSFGLESVRVEIQKAKLELMFELKR 1293
            IDRFE  RKFRLSTY LFWIRHAIIR MT SSFT+V FGLES+RVEIQKAKLEL+FEL+R
Sbjct: 322  IDRFEPNRKFRLSTYGLFWIRHAIIRYMTTSSFTKVPFGLESIRVEIQKAKLELLFELQR 381

Query: 1294 MPTEEEILERVGISAERYQDVMRASNSVSSLHSRHQVTQEELINGIVDVDGVGSDNQRQP 1473
            +PT++EI++RVG S ERY +VM+ S  + SLH+R++ TQEELINGI DVDGV  D ++QP
Sbjct: 382  IPTDDEIIKRVGFSPERYHEVMKVSKPIFSLHARNKTTQEELINGITDVDGVDGDKRKQP 441

Query: 1474 AXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEMKALMK 1653
            A             KPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHE+KALMK
Sbjct: 442  ALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMK 501

Query: 1654 LKHPTRVDYLQR 1689
            LKHPTRVDY++R
Sbjct: 502  LKHPTRVDYVRR 513


>ref|XP_006422121.1| hypothetical protein CICLE_v10004760mg [Citrus clementina]
            gi|567858878|ref|XP_006422122.1| hypothetical protein
            CICLE_v10004760mg [Citrus clementina]
            gi|568874930|ref|XP_006490565.1| PREDICTED: RNA
            polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X1 [Citrus
            sinensis] gi|568874932|ref|XP_006490566.1| PREDICTED: RNA
            polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X2 [Citrus
            sinensis] gi|568874934|ref|XP_006490567.1| PREDICTED: RNA
            polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X3 [Citrus
            sinensis] gi|557523994|gb|ESR35361.1| hypothetical
            protein CICLE_v10004760mg [Citrus clementina]
            gi|557523995|gb|ESR35362.1| hypothetical protein
            CICLE_v10004760mg [Citrus clementina]
          Length = 513

 Score =  580 bits (1494), Expect = e-162
 Identities = 308/496 (62%), Positives = 372/496 (75%), Gaps = 1/496 (0%)
 Frame = +1

Query: 214  HQSSIKGPLILGFKVDKNKKSALVAVSEPSRLRVETKKENHKRVRSVTKPSKGVRVASVA 393
            H+S+ K PLI+ FK DK+   AL +  E   L +ET K + KR  +  K  + V+     
Sbjct: 22   HRSTSKRPLIVAFKADKSNNQALFSPQEQIPLPIETPKRHQKRRENSRKRLERVKGVFSD 81

Query: 394  EASPYAVELDLNEAAAKLESIFKRSPSTDALDLENIDQTLKEKRGKRKKSTEVDEKKEKR 573
            EASP  +++D NEAAAKLE+I+K SP+    +++  D  +K  R +RK+  EV++K +  
Sbjct: 82   EASPCTLDVDYNEAAAKLENIYKLSPAVTTSEVKYADGVVKRGRQRRKRIGEVEKKSDDV 141

Query: 574  IDR-IVTNKNRKSKRLSLAKRIXXXXXXXXXXXXAVFLAEKKRTVKNENVKIDELVREYS 750
              + +V N+ ++ KRLSL KRI             V    +K   K+E+ KI++LVREYS
Sbjct: 142  SGKPVVRNQVKRPKRLSLDKRIELRKNEDEK----VVTKTRKTDSKDEHEKIEKLVREYS 197

Query: 751  ASTDLVSLDWKKMKIPPVLPSSEHTWLFKLMEQMKALNQVKENLRTELGRDPTDHELGEA 930
             STDLVSLDWKKMKIPPVL S+EHTWLFKLM+ MK   QVKE L+ +LGR+PTD EL EA
Sbjct: 198  YSTDLVSLDWKKMKIPPVLSSTEHTWLFKLMQPMKVFVQVKEQLQKDLGREPTDVELAEA 257

Query: 931  MNMTIVQVRRHLEVGHAARNKLIKHNLRLVLFVMNKYFQDFTNGPRFQDLCQAGVKGLII 1110
             NM+  QV++ LEVG AARNKLIKHNLRLVLFV+ KYFQDF NGPRFQDLCQAGVKGLI 
Sbjct: 258  TNMSAAQVKKCLEVGRAARNKLIKHNLRLVLFVIKKYFQDFANGPRFQDLCQAGVKGLIT 317

Query: 1111 AIDRFESRRKFRLSTYALFWIRHAIIRSMTVSSFTRVSFGLESVRVEIQKAKLELMFELK 1290
            AIDRFE +R+FRLSTY LFWIRHAIIRSMTVSSFTRV FGLESVR EIQ+AKLEL+FELK
Sbjct: 318  AIDRFEPKRRFRLSTYGLFWIRHAIIRSMTVSSFTRVPFGLESVRGEIQRAKLELLFELK 377

Query: 1291 RMPTEEEILERVGISAERYQDVMRASNSVSSLHSRHQVTQEELINGIVDVDGVGSDNQRQ 1470
            R+PT+EEI++ V IS ERY++VM+AS  + SLHSRH VTQEE INGI DVDGV ++NQRQ
Sbjct: 378  RVPTDEEIIQGVNISPERYREVMKASKPILSLHSRHGVTQEEFINGITDVDGVENENQRQ 437

Query: 1471 PAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEMKALM 1650
            PA             KPKESLVIRQR+GLDGKGDRTLGEIAGNLNISREMVRKHE+K LM
Sbjct: 438  PALLRLALDDVLDSLKPKESLVIRQRFGLDGKGDRTLGEIAGNLNISREMVRKHEVKGLM 497

Query: 1651 KLKHPTRVDYLQRRLL 1698
            KLKHPTRVDYL++ ++
Sbjct: 498  KLKHPTRVDYLRQHMV 513


>ref|XP_004166500.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 515

 Score =  579 bits (1492), Expect = e-162
 Identities = 312/498 (62%), Positives = 368/498 (73%), Gaps = 3/498 (0%)
 Frame = +1

Query: 214  HQSSIKGPLILGFKVDKNKKSALVAVSEPSRLRVETKKENHKRVRSVTKPSKGVRVASVA 393
            H S++K P I+ FK DK+  + LV+  E   L VE+     KR  + +KP K V+   + 
Sbjct: 24   HSSTLKRPSIVAFKADKHTNTTLVSPHEQVTLPVESNNRRKKRSGNTSKPLKRVKAVLID 83

Query: 394  EASPYAVELDLNEAAAKLESIFKRSPSTDALDLENIDQTLKEKRGKRKKSTEVDEKKEKR 573
            EA+P +++LD NEAAAKLE+IFK SP T+  D E  D   K  + + KKS        + 
Sbjct: 84   EATPCSLDLDYNEAAAKLENIFKLSPMTEDSDKECKDGRSKRGQKRSKKSAN------RP 137

Query: 574  IDRIVTNKNRKSKRLSLAKRIXXXXXXXXXXXX---AVFLAEKKRTVKNENVKIDELVRE 744
             D IV N+ ++ KRL L KRI               AV    K++  KNE+ +ID LVR+
Sbjct: 138  GDGIVRNQTKRIKRLDLDKRIALKNKRKAKRNKEGKAVPSLRKQKETKNEDDEIDRLVRD 197

Query: 745  YSASTDLVSLDWKKMKIPPVLPSSEHTWLFKLMEQMKALNQVKENLRTELGRDPTDHELG 924
            YSASTDLVSLDWKKMKIPPVLPSSEHT LFKL++ MKAL +V+E L+  LGR+PT+ EL 
Sbjct: 198  YSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPMKALVEVQEELQKGLGREPTEGELA 257

Query: 925  EAMNMTIVQVRRHLEVGHAARNKLIKHNLRLVLFVMNKYFQDFTNGPRFQDLCQAGVKGL 1104
             A NM ++QVRR LEVG AARNKLIKHNLRLVLFV+NKYF+DF +GP+FQDLCQAGVKGL
Sbjct: 258  NATNMNVIQVRRQLEVGRAARNKLIKHNLRLVLFVINKYFEDFASGPKFQDLCQAGVKGL 317

Query: 1105 IIAIDRFESRRKFRLSTYALFWIRHAIIRSMTVSSFTRVSFGLESVRVEIQKAKLELMFE 1284
            I AIDRFE +RKFRLSTYALFWIRHAIIRSMT+SSFTRVSFGL+SVRVEIQ+AKLEL+ E
Sbjct: 318  ITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVEIQRAKLELLCE 377

Query: 1285 LKRMPTEEEILERVGISAERYQDVMRASNSVSSLHSRHQVTQEELINGIVDVDGVGSDNQ 1464
            L R+PTE EI  +VGIS ERY +VMRA+  V SLHSRH  T EELINGI DV+G G DN+
Sbjct: 378  LHRLPTEGEITAKVGISQERYLEVMRATKPVYSLHSRHSTTSEELINGITDVEGTGGDNR 437

Query: 1465 RQPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEMKA 1644
            RQPA             KPKESLVIRQRYGLDGKG+RTLGEIAGNLNISREMVRKHE+KA
Sbjct: 438  RQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISREMVRKHEVKA 497

Query: 1645 LMKLKHPTRVDYLQRRLL 1698
            LMKLKHP RVDYL+R L+
Sbjct: 498  LMKLKHPARVDYLRRYLI 515


>ref|XP_003541542.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X1 [Glycine max]
            gi|571496981|ref|XP_006593757.1| PREDICTED: RNA
            polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X2 [Glycine max]
          Length = 512

 Score =  578 bits (1489), Expect = e-162
 Identities = 302/492 (61%), Positives = 372/492 (75%)
 Frame = +1

Query: 214  HQSSIKGPLILGFKVDKNKKSALVAVSEPSRLRVETKKENHKRVRSVTKPSKGVRVASVA 393
            HQ   K P+IL FK +K+ K+ LV+  E   L +ET K++ KRV   ++  K VR  S  
Sbjct: 24   HQQVHKRPIILAFKGNKSNKTTLVSPQEKIPLPLETAKKHQKRVGKTSESLKRVRAVSTV 83

Query: 394  EASPYAVELDLNEAAAKLESIFKRSPSTDALDLENIDQTLKEKRGKRKKSTEVDEKKEKR 573
            E SP  +++D NEAAAKLE+I+K SP +D  ++E+ID  ++    +RKK +E  E+ +  
Sbjct: 84   ETSPCTLDVDYNEAAAKLENIYKLSPVSDTCNVEDIDSKIERVLRRRKKVSE--ERDDGN 141

Query: 574  IDRIVTNKNRKSKRLSLAKRIXXXXXXXXXXXXAVFLAEKKRTVKNENVKIDELVREYSA 753
             D +V N+N+K+KRLSL KRI             +   +KKR VKN    ID L+R+YSA
Sbjct: 142  CDNVVRNQNKKAKRLSLDKRIALKNNAKEE---VIDQTQKKRNVKNRVQNIDVLIRDYSA 198

Query: 754  STDLVSLDWKKMKIPPVLPSSEHTWLFKLMEQMKALNQVKENLRTELGRDPTDHELGEAM 933
            STDLVS+DWKKMKIPPVLPSSEH WLFKLM+ MKAL Q KE+L+ E+ ++ T  EL +A 
Sbjct: 199  STDLVSMDWKKMKIPPVLPSSEHAWLFKLMQPMKALLQAKEDLK-EVDKEITGGELADAT 257

Query: 934  NMTIVQVRRHLEVGHAARNKLIKHNLRLVLFVMNKYFQDFTNGPRFQDLCQAGVKGLIIA 1113
            NM+I+QVR+ +EVG AARNKLIKHNLRLVLFV+NKYFQDF +GPRFQDLCQAGVKGLI A
Sbjct: 258  NMSIIQVRKAIEVGRAARNKLIKHNLRLVLFVINKYFQDFASGPRFQDLCQAGVKGLITA 317

Query: 1114 IDRFESRRKFRLSTYALFWIRHAIIRSMTVSSFTRVSFGLESVRVEIQKAKLELMFELKR 1293
            IDRFE +R+ +LSTY+LFWIRH+I+RS+T+SSFTRV FGLE VRV+IQ+ KL+L FEL+R
Sbjct: 318  IDRFEPKRRLQLSTYSLFWIRHSIVRSITLSSFTRVPFGLERVRVDIQRTKLKLTFELQR 377

Query: 1294 MPTEEEILERVGISAERYQDVMRASNSVSSLHSRHQVTQEELINGIVDVDGVGSDNQRQP 1473
             PTEEE++ER+GIS ERY +VM+AS  + SLHSRH  TQEE INGI DVDGV  DN+RQ 
Sbjct: 378  SPTEEELVERIGISLERYHEVMKASKPILSLHSRHITTQEEYINGITDVDGVNGDNRRQL 437

Query: 1474 AXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEMKALMK 1653
            A             KPKESLVIRQRYGLDGKGDRTLGEIAGNLNISRE+VRKHE+KALMK
Sbjct: 438  AVLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREIVRKHEVKALMK 497

Query: 1654 LKHPTRVDYLQR 1689
            LKHP R+DYL+R
Sbjct: 498  LKHPARLDYLRR 509


>ref|XP_004149458.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 514

 Score =  577 bits (1487), Expect = e-162
 Identities = 313/500 (62%), Positives = 369/500 (73%), Gaps = 5/500 (1%)
 Frame = +1

Query: 214  HQSSIKGPLILGFKVDKNKKSALVAVSEPSRLRVETKKENHKRVRSVTKPSKGVRVASVA 393
            H S++K P I+ FK DK+  + LV+  E   L VE+     KR  + +KP K V+   + 
Sbjct: 24   HSSTLKRPSIVAFKADKHTNTTLVSPHEQVTLPVESNNRRKKRSGNTSKPLKRVKAVLID 83

Query: 394  EASPYAVELDLNEAAAKLESIFKRSPSTDALDLENIDQTLKEKRGKRKKSTEVDEKKEKR 573
            EA+P +++LD NEAAAKLE+IFK SP T+  D E  D   K  + + KKS        + 
Sbjct: 84   EATPCSLDLDYNEAAAKLENIFKLSPMTEDSDKECKDGRSKRGQKRSKKSAN------RP 137

Query: 574  IDRIVTNKNRKSKRLSLAKRIXXXXXXXXXXXXAVFLAEKKRTVKNE-----NVKIDELV 738
             D IV N+ ++ KRL L KRI            AV L  K++  KNE     + +ID LV
Sbjct: 138  GDGIVRNQTKRIKRLDLDKRIALKNKKEGK---AVALLRKQKDTKNEADEIDDDEIDRLV 194

Query: 739  REYSASTDLVSLDWKKMKIPPVLPSSEHTWLFKLMEQMKALNQVKENLRTELGRDPTDHE 918
            R+YSASTDLVSLDWKKMKIPPVLPSSEHT LFKL++ MKAL +V+E L+  LGR+PT+ E
Sbjct: 195  RDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPMKALVEVQEELQKGLGREPTEGE 254

Query: 919  LGEAMNMTIVQVRRHLEVGHAARNKLIKHNLRLVLFVMNKYFQDFTNGPRFQDLCQAGVK 1098
            L  A NM ++QVRR LEVG AARNKLIKHNLRLVLFV+NKYF+DF +GP+FQDLCQAGVK
Sbjct: 255  LANATNMNVIQVRRQLEVGRAARNKLIKHNLRLVLFVINKYFEDFASGPKFQDLCQAGVK 314

Query: 1099 GLIIAIDRFESRRKFRLSTYALFWIRHAIIRSMTVSSFTRVSFGLESVRVEIQKAKLELM 1278
            GLI AIDRFE +RKFRLSTYALFWIRHAIIRSMT+SSFTRVSFGL+SVRVEIQ+AKLEL+
Sbjct: 315  GLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVEIQRAKLELL 374

Query: 1279 FELKRMPTEEEILERVGISAERYQDVMRASNSVSSLHSRHQVTQEELINGIVDVDGVGSD 1458
             EL R+PTE EI  +VGIS ERY +VMRA+  V SLHSRH  T EELINGI DV+G G D
Sbjct: 375  CELHRLPTEGEITAKVGISQERYLEVMRATKPVYSLHSRHSTTSEELINGITDVEGTGGD 434

Query: 1459 NQRQPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEM 1638
            N+RQPA             KPKESLVIRQRYGLDGKG+RTLGEIAGNLNISREMVRKHE+
Sbjct: 435  NRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISREMVRKHEV 494

Query: 1639 KALMKLKHPTRVDYLQRRLL 1698
            KALMKLKHP RVDYL+R L+
Sbjct: 495  KALMKLKHPARVDYLRRYLI 514


>ref|XP_002331841.1| predicted protein [Populus trichocarpa]
          Length = 512

 Score =  575 bits (1481), Expect = e-161
 Identities = 306/492 (62%), Positives = 374/492 (76%), Gaps = 1/492 (0%)
 Frame = +1

Query: 217  QSSIKGPLILGFKVDKNKKSALVAVSEPSRLRVETKKENHKRVRSVTKPSKGVRVASVAE 396
            +S+ K PLI+ FK DK+ ++ALVA  E   L +ET KE  +R +S  K S     A   E
Sbjct: 25   RSTAKRPLIVAFKADKSNETALVAPHEQIPLPIETTKEKKRRGKS--KKSSDRLKAVRTE 82

Query: 397  ASPYAVELDLNEAAAKLESIFKRSPSTDALDLENIDQTLKEKRGKRKKSTEVDEKKEKRI 576
             SP  + +D NEAAAKLE+I+K SP TD  D+E+++  ++  R +++K++E +++ + R 
Sbjct: 83   VSPCTLGVDYNEAAAKLENIYKLSPGTDTSDVEDVNGVIRRCRQRKRKTSECEKEDDGRT 142

Query: 577  DRIVT-NKNRKSKRLSLAKRIXXXXXXXXXXXXAVFLAEKKRTVKNENVKIDELVREYSA 753
             +I+  N+ +K+KRLSL KRI            +V    K++  KNEN KIDELVREYS+
Sbjct: 143  SKIIVRNQAKKAKRLSLQKRIALRIKSDEKLVTSV---GKRKGRKNENEKIDELVREYSS 199

Query: 754  STDLVSLDWKKMKIPPVLPSSEHTWLFKLMEQMKALNQVKENLRTELGRDPTDHELGEAM 933
            STDL SLDWKKMKIPPVL S+EH WLFKLM+ MKA  QVKE+L+   GR+PT+ EL EA 
Sbjct: 200  STDLASLDWKKMKIPPVLTSAEHAWLFKLMQPMKASLQVKEHLQENSGREPTEGELAEAT 259

Query: 934  NMTIVQVRRHLEVGHAARNKLIKHNLRLVLFVMNKYFQDFTNGPRFQDLCQAGVKGLIIA 1113
            +M ++QVR+ +EVG AARNKLIKHNLRLVLFV+NKYFQD+ NGPR+QDLCQAGVKGL+ A
Sbjct: 260  DMDVLQVRKQIEVGRAARNKLIKHNLRLVLFVINKYFQDYANGPRYQDLCQAGVKGLMTA 319

Query: 1114 IDRFESRRKFRLSTYALFWIRHAIIRSMTVSSFTRVSFGLESVRVEIQKAKLELMFELKR 1293
            IDRFE +R+FRLSTY LFWIRHAIIRSMT+SSFTRVSFGLES+R EIQKAKLEL F+L R
Sbjct: 320  IDRFEPKRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLESIRSEIQKAKLELWFQLLR 379

Query: 1294 MPTEEEILERVGISAERYQDVMRASNSVSSLHSRHQVTQEELINGIVDVDGVGSDNQRQP 1473
             PT EEI+E+VGIS ERY +VMRAS  V SLHSRH+ TQEELI+G+ DV+  G D++RQ 
Sbjct: 380  KPTGEEIIEKVGISIERYHEVMRASKPVLSLHSRHKTTQEELISGVADVN--GGDDRRQS 437

Query: 1474 AXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEMKALMK 1653
            A             KPKESLV+RQR+GLDGKGDRTLGEIAGNLNISREMVRKHE KALMK
Sbjct: 438  ALLRLALDDVLDSLKPKESLVVRQRFGLDGKGDRTLGEIAGNLNISREMVRKHEAKALMK 497

Query: 1654 LKHPTRVDYLQR 1689
            LKHPTRVDYL R
Sbjct: 498  LKHPTRVDYLCR 509


>ref|XP_002513587.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
            gi|223547495|gb|EEF48990.1| RNA polymerase sigma factor
            rpoD, putative [Ricinus communis]
          Length = 501

 Score =  571 bits (1472), Expect = e-160
 Identities = 307/493 (62%), Positives = 370/493 (75%), Gaps = 1/493 (0%)
 Frame = +1

Query: 214  HQSSIKGPLILGFKVDKNKKSALVAVSEPSRLRVETKKENHKRVRSVTKPSKGVRVASVA 393
            ++S++K  L++ FK DK     LV   E + L +ET K   +R ++  + S G       
Sbjct: 24   YRSTVKRSLVVAFKEDKANDIILVPPRERTPLPIETSKGKKRRGKTNREVSSGT------ 77

Query: 394  EASPYAVELDLNEAAAKLESIFKRSPSTDALDLENIDQTLKEKRGKRKKSTEVDEKKEKR 573
                  +E+D NEAAAKLE+I+K SP+TD  D++ I+  +++ R +++K+ E DEK E R
Sbjct: 78   ------LEVDYNEAAAKLENIYKLSPATDTSDVD-INGLIRKGRQRKRKTGEGDEKAENR 130

Query: 574  IDR-IVTNKNRKSKRLSLAKRIXXXXXXXXXXXXAVFLAEKKRTVKNENVKIDELVREYS 750
              R IV N+ +K+KRLSL KRI             +    KK+  K++N KI+ELVR YS
Sbjct: 131  TSRTIVRNRAKKTKRLSLDKRIALKKNEEEEVVGPI---RKKKDSKDDNEKIEELVRTYS 187

Query: 751  ASTDLVSLDWKKMKIPPVLPSSEHTWLFKLMEQMKALNQVKENLRTELGRDPTDHELGEA 930
            AST+LVSLDW+KMKIPPVLPS+EH WLFKLM+ MK L  VK +L+  LGRDPTD EL EA
Sbjct: 188  ASTNLVSLDWRKMKIPPVLPSTEHAWLFKLMQPMKTLLPVKADLQKNLGRDPTDGELAEA 247

Query: 931  MNMTIVQVRRHLEVGHAARNKLIKHNLRLVLFVMNKYFQDFTNGPRFQDLCQAGVKGLII 1110
             NM + +VR+ LEVG AARNKLIKHNLRLV+FVMNKYFQDF NGPRFQDLCQAGVKGLI 
Sbjct: 248  TNMNVEKVRKQLEVGRAARNKLIKHNLRLVMFVMNKYFQDFANGPRFQDLCQAGVKGLIT 307

Query: 1111 AIDRFESRRKFRLSTYALFWIRHAIIRSMTVSSFTRVSFGLESVRVEIQKAKLELMFELK 1290
            AIDRFE +R+F+LSTY+LFWIRHAIIRSMT+SSFT+VSFGLESVR EIQKAKLEL+ EL+
Sbjct: 308  AIDRFEPQRRFQLSTYSLFWIRHAIIRSMTLSSFTKVSFGLESVRTEIQKAKLELLIELQ 367

Query: 1291 RMPTEEEILERVGISAERYQDVMRASNSVSSLHSRHQVTQEELINGIVDVDGVGSDNQRQ 1470
            R PTEEEI+ERVGISAERY +V+RA+    SLH+RH VTQEE INGI D+D  G DN+RQ
Sbjct: 368  RRPTEEEIIERVGISAERYHEVIRAAKPALSLHARHAVTQEEFINGITDID--GGDNRRQ 425

Query: 1471 PAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEMKALM 1650
            PA             KPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRK+E+KALM
Sbjct: 426  PALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKYEVKALM 485

Query: 1651 KLKHPTRVDYLQR 1689
            KLKHP RVDYL+R
Sbjct: 486  KLKHPARVDYLRR 498


>ref|NP_001254001.1| RNA polymerase sigma factor rpoD-like [Glycine max]
            gi|382365028|dbj|BAM05477.1| sigma-like factor 5A
            [Glycine max]
          Length = 512

 Score =  568 bits (1463), Expect = e-159
 Identities = 299/492 (60%), Positives = 371/492 (75%)
 Frame = +1

Query: 214  HQSSIKGPLILGFKVDKNKKSALVAVSEPSRLRVETKKENHKRVRSVTKPSKGVRVASVA 393
            HQ   K PLI+ FK +K  K+ALV+  E   L +ET K++ KRV   ++  K VR  S+ 
Sbjct: 24   HQQVHKRPLIVAFKGNKLNKAALVSPQEQIPLPIETAKKDQKRVGKTSESLKRVRAVSIV 83

Query: 394  EASPYAVELDLNEAAAKLESIFKRSPSTDALDLENIDQTLKEKRGKRKKSTEVDEKKEKR 573
            E SP  +++D NEAAAKLE+I+K SP +D  ++E+ID  ++    +R+K    +E  ++ 
Sbjct: 84   ETSPCTLDMDYNEAAAKLENIYKLSPVSDTCNMEDIDSKVERVLWRRRKVG--NEHDDEN 141

Query: 574  IDRIVTNKNRKSKRLSLAKRIXXXXXXXXXXXXAVFLAEKKRTVKNENVKIDELVREYSA 753
             D +V N+N+K+KRLSL KRI             +   +K R VKN    ID L+R+YSA
Sbjct: 142  CDIVVRNQNKKAKRLSLDKRITLKNNAKEE---VIDQTQKIRNVKNRVQNIDVLIRDYSA 198

Query: 754  STDLVSLDWKKMKIPPVLPSSEHTWLFKLMEQMKALNQVKENLRTELGRDPTDHELGEAM 933
            STDLVS+DWKKMKIP VLPSSEH WLFKLM+ MKAL Q KE+L++ +G++ TD EL +A 
Sbjct: 199  STDLVSMDWKKMKIPAVLPSSEHAWLFKLMQPMKALLQAKEDLQS-VGKEITDGELADAT 257

Query: 934  NMTIVQVRRHLEVGHAARNKLIKHNLRLVLFVMNKYFQDFTNGPRFQDLCQAGVKGLIIA 1113
            NM+I+QVR+ +EVG AARNKLIKHNLRLVLFV++KYFQDF +G RFQDLCQAGVKGLI A
Sbjct: 258  NMSIIQVRKAIEVGRAARNKLIKHNLRLVLFVISKYFQDFASGRRFQDLCQAGVKGLITA 317

Query: 1114 IDRFESRRKFRLSTYALFWIRHAIIRSMTVSSFTRVSFGLESVRVEIQKAKLELMFELKR 1293
            IDRFE +R+ +LSTY+LFWIRH+I+RS+T+SSFTRV FGLE VRV+IQ+ KL+L FEL+R
Sbjct: 318  IDRFEPKRRLQLSTYSLFWIRHSIVRSITLSSFTRVPFGLERVRVDIQRTKLKLTFELQR 377

Query: 1294 MPTEEEILERVGISAERYQDVMRASNSVSSLHSRHQVTQEELINGIVDVDGVGSDNQRQP 1473
             PTEEE++ER+GIS ERY +VM+AS  + SLHSRH  TQEE INGI DVDGV  DN+RQ 
Sbjct: 378  SPTEEELVERIGISPERYYEVMKASKPILSLHSRHITTQEEYINGITDVDGVNGDNRRQL 437

Query: 1474 AXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEMKALMK 1653
            A             KPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHE+KALMK
Sbjct: 438  AVLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMK 497

Query: 1654 LKHPTRVDYLQR 1689
            LKHP R+DYL+R
Sbjct: 498  LKHPARLDYLRR 509


>ref|XP_006376620.1| RNA polymerase sigma subunit SigE family protein [Populus
            trichocarpa] gi|550326141|gb|ERP54417.1| RNA polymerase
            sigma subunit SigE family protein [Populus trichocarpa]
          Length = 512

 Score =  567 bits (1462), Expect = e-159
 Identities = 308/491 (62%), Positives = 365/491 (74%), Gaps = 1/491 (0%)
 Frame = +1

Query: 220  SSIKGPLILGFKVDKNKKSALVAVSEPSRLRVETKKENHKRVRSVTKPSKGVRVASVAEA 399
            S+ K PLI+ FK +K+  ++LVA  E   L VET K   KR+    K S  ++     E 
Sbjct: 26   STAKRPLIVAFKANKSNNTSLVAPHEQIPLPVETTK-GKKRLGKSKKSSNRLKAVRT-EV 83

Query: 400  SPYAVELDLNEAAAKLESIFKRSPSTDALDLENIDQTLKEKRGKRKKSTEVDEKKEKRID 579
            SP  + +D NEAAAKLE+I+K SP TD  D+E+    ++  R +++K +E D++ E R  
Sbjct: 84   SPCTLLVDYNEAAAKLENIYKLSPGTDTSDVEDASGVIRRGRQRKRKISEGDKETEDRTG 143

Query: 580  RIVT-NKNRKSKRLSLAKRIXXXXXXXXXXXXAVFLAEKKRTVKNENVKIDELVREYSAS 756
            +I+  N+ +K+KRLSL KRI             V  A K++  KNEN KID+LVREYSAS
Sbjct: 144  KIIVRNRAKKAKRLSLEKRISLRIKNEEKL---VSSAGKRKDRKNENEKIDDLVREYSAS 200

Query: 757  TDLVSLDWKKMKIPPVLPSSEHTWLFKLMEQMKALNQVKENLRTELGRDPTDHELGEAMN 936
            TDLVSLDWKKMKIPPVL SSEH WLFKLM+ MKAL QVKE+L+  LG +PTD EL +A N
Sbjct: 201  TDLVSLDWKKMKIPPVLTSSEHVWLFKLMQPMKALLQVKEHLQENLGGEPTDVELAKATN 260

Query: 937  MTIVQVRRHLEVGHAARNKLIKHNLRLVLFVMNKYFQDFTNGPRFQDLCQAGVKGLIIAI 1116
            M ++QVR+ + VG AARNKLIKHNLRLVLFV+ KYFQDF NG +FQD CQAGVKGLI AI
Sbjct: 261  MDVLQVRKQIAVGRAARNKLIKHNLRLVLFVIKKYFQDFANGTKFQDFCQAGVKGLITAI 320

Query: 1117 DRFESRRKFRLSTYALFWIRHAIIRSMTVSSFTRVSFGLESVRVEIQKAKLELMFELKRM 1296
            DRFE +R+FRLSTY LFWIRHAIIRSMT+SSFTRVSFGLES+R EIQKAKLEL F+LKR 
Sbjct: 321  DRFEPKRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLESIRSEIQKAKLELWFQLKRQ 380

Query: 1297 PTEEEILERVGISAERYQDVMRASNSVSSLHSRHQVTQEELINGIVDVDGVGSDNQRQPA 1476
            P E+EI+E+V IS ERY +V RAS  V SLHSRH+ TQEE I GI DVD  G D++RQ A
Sbjct: 381  PMEDEIIEKVRISPERYHEVTRASKPVLSLHSRHKTTQEEFIGGIADVD--GGDDRRQSA 438

Query: 1477 XXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEMKALMKL 1656
                         KPKESLV+RQRYGLDGKGDRTLGEIAGNLNISREMVRKHE+KALMKL
Sbjct: 439  LLRLALDDVLDSLKPKESLVVRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKL 498

Query: 1657 KHPTRVDYLQR 1689
            KHPTRVDYL+R
Sbjct: 499  KHPTRVDYLRR 509


>ref|XP_002333134.1| predicted protein [Populus trichocarpa]
          Length = 512

 Score =  567 bits (1462), Expect = e-159
 Identities = 308/491 (62%), Positives = 365/491 (74%), Gaps = 1/491 (0%)
 Frame = +1

Query: 220  SSIKGPLILGFKVDKNKKSALVAVSEPSRLRVETKKENHKRVRSVTKPSKGVRVASVAEA 399
            S+ K PLI+ FK DK+  ++LVA  E   L VET K   KR+    K S  ++     E 
Sbjct: 26   STAKRPLIVAFKADKSNNTSLVAPHEQIPLPVETTK-GKKRLGKSKKSSNRLKAVRT-EV 83

Query: 400  SPYAVELDLNEAAAKLESIFKRSPSTDALDLENIDQTLKEKRGKRKKSTEVDEKKEKRID 579
            SP  + +D NEAAAKLE+I+K SP TD  D+E+    ++  R +++K +E  ++ E R  
Sbjct: 84   SPCTLLVDYNEAAAKLENIYKLSPGTDTSDVEDASGVIRRGRQRKRKISEGGKETEDRTG 143

Query: 580  RIVT-NKNRKSKRLSLAKRIXXXXXXXXXXXXAVFLAEKKRTVKNENVKIDELVREYSAS 756
            +I+  N+ +K+KRLSL KRI             V  A K++  KNEN KID+LVREYSAS
Sbjct: 144  KIIVRNRAKKAKRLSLEKRISLRIKNEEKL---VSSAGKRKDRKNENEKIDDLVREYSAS 200

Query: 757  TDLVSLDWKKMKIPPVLPSSEHTWLFKLMEQMKALNQVKENLRTELGRDPTDHELGEAMN 936
            TDLVSLDWKKMKIPPVL SSEH WLFKLM+ MKAL QVKE+L+  LG +PTD EL +A+N
Sbjct: 201  TDLVSLDWKKMKIPPVLTSSEHVWLFKLMQPMKALLQVKEHLQENLGGEPTDVELAKAIN 260

Query: 937  MTIVQVRRHLEVGHAARNKLIKHNLRLVLFVMNKYFQDFTNGPRFQDLCQAGVKGLIIAI 1116
            M ++QVR+ + VG AARNKLIKHNLRLVLFV+ KYFQDF NG +FQD CQAGVKGLI AI
Sbjct: 261  MDVLQVRKQIAVGRAARNKLIKHNLRLVLFVIKKYFQDFANGTKFQDFCQAGVKGLITAI 320

Query: 1117 DRFESRRKFRLSTYALFWIRHAIIRSMTVSSFTRVSFGLESVRVEIQKAKLELMFELKRM 1296
            DRFE +R+FRLSTY LFWIRHAIIRSMT+SSFTRVSFGLES+R EIQKAKLEL F+LKR 
Sbjct: 321  DRFEPKRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLESIRSEIQKAKLELWFQLKRQ 380

Query: 1297 PTEEEILERVGISAERYQDVMRASNSVSSLHSRHQVTQEELINGIVDVDGVGSDNQRQPA 1476
            P E+EI+E+V IS ERY +V RAS  V SLHSRH+ TQEE I GI DVD  G D++RQ A
Sbjct: 381  PMEDEIIEKVRISPERYHEVTRASKPVLSLHSRHKTTQEEFIGGIADVD--GGDDRRQSA 438

Query: 1477 XXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEMKALMKL 1656
                         KPKESLV+RQRYGLDGKGDRTLGEIAGNLNISREMVRKHE+KALMKL
Sbjct: 439  LLRLALDDVLDSLKPKESLVVRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKL 498

Query: 1657 KHPTRVDYLQR 1689
            KHPTRVDYL+R
Sbjct: 499  KHPTRVDYLRR 509


>ref|XP_006581623.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X2 [Glycine max]
          Length = 507

 Score =  559 bits (1440), Expect = e-156
 Identities = 305/491 (62%), Positives = 363/491 (73%), Gaps = 3/491 (0%)
 Frame = +1

Query: 226  IKGPLILGFKVDKNKKSALVAVSEPSRLRVET-KKENHKRVRSVTKPSKGVRVASVAEAS 402
            +K PLI+ FK DK+  SALVA  E   + VET KK   KR+    K  K        E+S
Sbjct: 26   LKRPLIVAFKGDKHNDSALVATQEKIPVPVETAKKTQKKRIGKTNKLPK-------RESS 78

Query: 403  PYAVELDLNEAAAKLESIFKRSPSTDALDLENIDQTLKEKRGKRKKSTEVDEKKEKRIDR 582
            P ++++D NEAAA LE+++K SP++D  + E ID  +K    + KK  +  E+KE + D 
Sbjct: 79   PSSMDVDYNEAAAMLENLYKLSPASD--NAECIDGKIKRVSRRGKKVVDESEEKELKGDW 136

Query: 583  IVTN--KNRKSKRLSLAKRIXXXXXXXXXXXXAVFLAEKKRTVKNENVKIDELVREYSAS 756
            +V N  KN+K KRL+L +RI             V    KKR V N+  KI+EL+REYS S
Sbjct: 137  VVRNQNKNKKPKRLNLDQRISLKNNKSGDE---VIPTRKKRNVGNKIEKIEELIREYSVS 193

Query: 757  TDLVSLDWKKMKIPPVLPSSEHTWLFKLMEQMKALNQVKENLRTELGRDPTDHELGEAMN 936
            TD VS+DWK+M+IPPVL SSEH WLFKLM+ MKAL QVKE+L+ EL R+P D EL +A N
Sbjct: 194  TDFVSMDWKRMRIPPVLSSSEHAWLFKLMQPMKALLQVKEDLQQELTREPADGELADATN 253

Query: 937  MTIVQVRRHLEVGHAARNKLIKHNLRLVLFVMNKYFQDFTNGPRFQDLCQAGVKGLIIAI 1116
            M+I QVR+ ++VG AARNKLIKHNLRLVLFV+NKYF DF +GPRFQDLCQAGVKGLI AI
Sbjct: 254  MSITQVRKAIDVGQAARNKLIKHNLRLVLFVINKYFTDFASGPRFQDLCQAGVKGLITAI 313

Query: 1117 DRFESRRKFRLSTYALFWIRHAIIRSMTVSSFTRVSFGLESVRVEIQKAKLELMFELKRM 1296
            DRFE  R+FRLSTY+LFWIRHAIIRSMT+S+FTRV FGLESVR EIQKAK EL FEL+R 
Sbjct: 314  DRFEPNRRFRLSTYSLFWIRHAIIRSMTLSNFTRVPFGLESVRAEIQKAKTELTFELQRS 373

Query: 1297 PTEEEILERVGISAERYQDVMRASNSVSSLHSRHQVTQEELINGIVDVDGVGSDNQRQPA 1476
            PTEEEI+ERV IS ERY DV++AS S+ SL+SRH  TQEE INGIVD DGV  DN++QPA
Sbjct: 374  PTEEEIIERVHISPERYHDVIKASKSILSLNSRHTTTQEEFINGIVDDDGVNGDNRKQPA 433

Query: 1477 XXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEMKALMKL 1656
                         KPKESLVIRQR+GLDGKGDRTLGEIAGNLNISREMVRKHE+KALMKL
Sbjct: 434  LLRLALDDVLDSLKPKESLVIRQRFGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKL 493

Query: 1657 KHPTRVDYLQR 1689
            KH  R+DYL+R
Sbjct: 494  KHSARLDYLRR 504


>ref|XP_006593758.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X3 [Glycine max]
          Length = 488

 Score =  556 bits (1434), Expect = e-155
 Identities = 295/493 (59%), Positives = 367/493 (74%)
 Frame = +1

Query: 211  VHQSSIKGPLILGFKVDKNKKSALVAVSEPSRLRVETKKENHKRVRSVTKPSKGVRVASV 390
            V  S+ + PL L  ++  +++       E   L +ET K++ KRV   ++  K VR  S 
Sbjct: 6    VSTSAARTPLRLNTRLISHQQ-------EKIPLPLETAKKHQKRVGKTSESLKRVRAVST 58

Query: 391  AEASPYAVELDLNEAAAKLESIFKRSPSTDALDLENIDQTLKEKRGKRKKSTEVDEKKEK 570
             E SP  +++D NEAAAKLE+I+K SP +D  ++E+ID  ++    +RKK +E  E+ + 
Sbjct: 59   VETSPCTLDVDYNEAAAKLENIYKLSPVSDTCNVEDIDSKIERVLRRRKKVSE--ERDDG 116

Query: 571  RIDRIVTNKNRKSKRLSLAKRIXXXXXXXXXXXXAVFLAEKKRTVKNENVKIDELVREYS 750
              D +V N+N+K+KRLSL KRI             +   +KKR VKN    ID L+R+YS
Sbjct: 117  NCDNVVRNQNKKAKRLSLDKRIALKNNAKEE---VIDQTQKKRNVKNRVQNIDVLIRDYS 173

Query: 751  ASTDLVSLDWKKMKIPPVLPSSEHTWLFKLMEQMKALNQVKENLRTELGRDPTDHELGEA 930
            ASTDLVS+DWKKMKIPPVLPSSEH WLFKLM+ MKAL Q KE+L+ E+ ++ T  EL +A
Sbjct: 174  ASTDLVSMDWKKMKIPPVLPSSEHAWLFKLMQPMKALLQAKEDLK-EVDKEITGGELADA 232

Query: 931  MNMTIVQVRRHLEVGHAARNKLIKHNLRLVLFVMNKYFQDFTNGPRFQDLCQAGVKGLII 1110
             NM+I+QVR+ +EVG AARNKLIKHNLRLVLFV+NKYFQDF +GPRFQDLCQAGVKGLI 
Sbjct: 233  TNMSIIQVRKAIEVGRAARNKLIKHNLRLVLFVINKYFQDFASGPRFQDLCQAGVKGLIT 292

Query: 1111 AIDRFESRRKFRLSTYALFWIRHAIIRSMTVSSFTRVSFGLESVRVEIQKAKLELMFELK 1290
            AIDRFE +R+ +LSTY+LFWIRH+I+RS+T+SSFTRV FGLE VRV+IQ+ KL+L FEL+
Sbjct: 293  AIDRFEPKRRLQLSTYSLFWIRHSIVRSITLSSFTRVPFGLERVRVDIQRTKLKLTFELQ 352

Query: 1291 RMPTEEEILERVGISAERYQDVMRASNSVSSLHSRHQVTQEELINGIVDVDGVGSDNQRQ 1470
            R PTEEE++ER+GIS ERY +VM+AS  + SLHSRH  TQEE INGI DVDGV  DN+RQ
Sbjct: 353  RSPTEEELVERIGISLERYHEVMKASKPILSLHSRHITTQEEYINGITDVDGVNGDNRRQ 412

Query: 1471 PAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEMKALM 1650
             A             KPKESLVIRQRYGLDGKGDRTLGEIAGNLNISRE+VRKHE+KALM
Sbjct: 413  LAVLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREIVRKHEVKALM 472

Query: 1651 KLKHPTRVDYLQR 1689
            KLKHP R+DYL+R
Sbjct: 473  KLKHPARLDYLRR 485


>ref|NP_001276145.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
            [Glycine max] gi|382365034|dbj|BAM05478.1| sigma-like
            factor 5B [Glycine max]
          Length = 507

 Score =  556 bits (1434), Expect = e-155
 Identities = 304/491 (61%), Positives = 362/491 (73%), Gaps = 3/491 (0%)
 Frame = +1

Query: 226  IKGPLILGFKVDKNKKSALVAVSEPSRLRVET-KKENHKRVRSVTKPSKGVRVASVAEAS 402
            +K PLI+ FK DK+  SALVA  E   + VET KK   KR+    K  K        E+S
Sbjct: 26   LKRPLIVAFKGDKHNDSALVATQEKIPVPVETAKKTQKKRIGKTNKLPK-------RESS 78

Query: 403  PYAVELDLNEAAAKLESIFKRSPSTDALDLENIDQTLKEKRGKRKKSTEVDEKKEKRIDR 582
            P ++++D NEAAA LE+++K SP++D  + E ID  +K    + KK  +  E+KE + D 
Sbjct: 79   PSSMDVDYNEAAAMLENLYKLSPASD--NAECIDGKIKRVSRRGKKVVDESEEKELKGDW 136

Query: 583  IVTN--KNRKSKRLSLAKRIXXXXXXXXXXXXAVFLAEKKRTVKNENVKIDELVREYSAS 756
            +V N  KN+K KRL+L +RI             V    KKR V N+  KI+EL+REYS S
Sbjct: 137  VVRNQNKNKKPKRLNLDQRISLKNNKSGDE---VIPTRKKRNVGNKIEKIEELIREYSVS 193

Query: 757  TDLVSLDWKKMKIPPVLPSSEHTWLFKLMEQMKALNQVKENLRTELGRDPTDHELGEAMN 936
            TD VS+DWK+M+IPPVL SSEH WLFKLM+ MKAL QVKE+L+ EL R+P D EL +A N
Sbjct: 194  TDFVSMDWKRMRIPPVLSSSEHAWLFKLMQPMKALLQVKEDLQQELTREPADGELADATN 253

Query: 937  MTIVQVRRHLEVGHAARNKLIKHNLRLVLFVMNKYFQDFTNGPRFQDLCQAGVKGLIIAI 1116
            M+I QVR+ ++VG AARNKLIKHNLRLVLFV+NKYF DF +GPRFQDLCQAGVKGLI AI
Sbjct: 254  MSITQVRKAIDVGQAARNKLIKHNLRLVLFVINKYFTDFASGPRFQDLCQAGVKGLITAI 313

Query: 1117 DRFESRRKFRLSTYALFWIRHAIIRSMTVSSFTRVSFGLESVRVEIQKAKLELMFELKRM 1296
            DRFE  R+FRLSTY+LFWIRHAIIRSMT+S+FTRV FGLESVR EIQKAK EL FEL+R 
Sbjct: 314  DRFEPNRRFRLSTYSLFWIRHAIIRSMTLSNFTRVPFGLESVRAEIQKAKTELTFELQRS 373

Query: 1297 PTEEEILERVGISAERYQDVMRASNSVSSLHSRHQVTQEELINGIVDVDGVGSDNQRQPA 1476
            PTEEEI+ERV IS ERY DV++AS S+ SL+SRH  TQEE INGIVD DGV  DN++QPA
Sbjct: 374  PTEEEIIERVHISPERYHDVIKASKSILSLNSRHTTTQEEFINGIVDDDGVNGDNRKQPA 433

Query: 1477 XXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEMKALMKL 1656
                         KPKESLVIR R+GLDGKGDRTLGEIAGNLNISREMVRKHE+KALMKL
Sbjct: 434  LLRLALDDVLDSLKPKESLVIRXRFGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKL 493

Query: 1657 KHPTRVDYLQR 1689
            KH  R+DYL+R
Sbjct: 494  KHSARLDYLRR 504


>ref|XP_006578934.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Glycine max]
          Length = 509

 Score =  556 bits (1432), Expect = e-155
 Identities = 299/491 (60%), Positives = 360/491 (73%), Gaps = 3/491 (0%)
 Frame = +1

Query: 226  IKGPLILGFKVDKNKKSALVAVSEPSRLRVET-KKENHKRVRSVTKPSKGVRVASVAEAS 402
            +K PLI+ FK DK+  SALVA  E   + VET KK   KR+    K  K        E+S
Sbjct: 26   LKRPLIVAFKGDKHNDSALVATQEKIPVPVETAKKTQKKRIGKSNKLPK-------RESS 78

Query: 403  PYAVELDLNEAAAKLESIFKRSPSTDALDLENIDQTLKEKRGKRKKSTEVDEKKEKRIDR 582
            P ++++D NEAAA LE+I+K SP++   + E ID  +K    + KK  +  E+KE + DR
Sbjct: 79   PSSMDVDYNEAAAMLENIYKLSPASHTGNAECIDDKIKRVSRRGKKVVDESEEKELKGDR 138

Query: 583  IVT--NKNRKSKRLSLAKRIXXXXXXXXXXXXAVFLAEKKRTVKNENVKIDELVREYSAS 756
            +V   NKN+K+KRL+L +RI             V    KKR  +N   KI+EL+REYS S
Sbjct: 139  VVRRQNKNKKAKRLTLDQRISLKNNKRGDE---VIPTRKKRNFRNRIEKIEELIREYSVS 195

Query: 757  TDLVSLDWKKMKIPPVLPSSEHTWLFKLMEQMKALNQVKENLRTELGRDPTDHELGEAMN 936
             D +S+DWK+M+IPPVL SSEH WLFKLM+ MKAL QVKE+L+ EL R+P D EL +A N
Sbjct: 196  NDFISMDWKRMRIPPVLSSSEHAWLFKLMQPMKALLQVKEDLQKELAREPADGELADATN 255

Query: 937  MTIVQVRRHLEVGHAARNKLIKHNLRLVLFVMNKYFQDFTNGPRFQDLCQAGVKGLIIAI 1116
            M+I QV++ ++VG AARNKLIKHNLRLVLFV+NKYF DF +GPRFQDLCQAGVKGLI AI
Sbjct: 256  MSITQVKKAIDVGQAARNKLIKHNLRLVLFVINKYFTDFASGPRFQDLCQAGVKGLITAI 315

Query: 1117 DRFESRRKFRLSTYALFWIRHAIIRSMTVSSFTRVSFGLESVRVEIQKAKLELMFELKRM 1296
            DRFE  R+FRLSTY+LFWIRHAIIRSMT+SSF RV FGLESVR EIQKAK EL F+L+R 
Sbjct: 316  DRFEPNRRFRLSTYSLFWIRHAIIRSMTLSSFIRVPFGLESVRAEIQKAKTELTFKLQRS 375

Query: 1297 PTEEEILERVGISAERYQDVMRASNSVSSLHSRHQVTQEELINGIVDVDGVGSDNQRQPA 1476
            PTEEEI+ERV IS ERY D+++AS S+ SL+SRH  TQEE INGIVD DGV  DN++QPA
Sbjct: 376  PTEEEIIERVHISPERYHDIIKASKSILSLNSRHTTTQEEFINGIVDDDGVNGDNRKQPA 435

Query: 1477 XXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEMKALMKL 1656
                         KPKESLVIRQR+GLDGKGDRTLGEIAGNLNISREMVRKHE+KALMKL
Sbjct: 436  LLRLALDDVLDSLKPKESLVIRQRFGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKL 495

Query: 1657 KHPTRVDYLQR 1689
             H  R+DYL+R
Sbjct: 496  NHSARLDYLRR 506