BLASTX nr result

ID: Achyranthes23_contig00017615 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00017615
         (772 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

prf||1613445A ribosomal protein CS-S5                                  87   5e-15
gb|AAA34039.1| ribosomal protein 30S subunit [Spinacia oleracea]       87   5e-15
sp|P19954.2|PRSP1_SPIOL RecName: Full=Ribosome-binding factor PS...    87   5e-15

>prf||1613445A ribosomal protein CS-S5
          Length = 321

 Score = 87.4 bits (215), Expect = 5e-15
 Identities = 51/84 (60%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
 Frame = -2

Query: 636 TLCASTINIHPNLTNSLSYFINXXXXXXXXXXXXSKFTNYSSFGLNIATKTVQF-HPKLN 460
           TLC S IN++PNLTNSLS  IN            S FTN  S GLN+A K+VQ    K N
Sbjct: 3   TLCTSAINMNPNLTNSLSNSINLSSTLTNLSSLRSTFTNSCSLGLNVAVKSVQISRNKPN 62

Query: 459 VVCMS*DDPLSSVKLILQGRNLEM 388
           VVCMS D PLSSVKLILQGRNLE+
Sbjct: 63  VVCMSWDGPLSSVKLILQGRNLEV 86


>gb|AAA34039.1| ribosomal protein 30S subunit [Spinacia oleracea]
          Length = 302

 Score = 87.4 bits (215), Expect = 5e-15
 Identities = 51/84 (60%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
 Frame = -2

Query: 636 TLCASTINIHPNLTNSLSYFINXXXXXXXXXXXXSKFTNYSSFGLNIATKTVQF-HPKLN 460
           TLC S IN++PNLTNSLS  IN            S FTN  S GLN+A K+VQ    K N
Sbjct: 3   TLCTSAINMNPNLTNSLSNSINLSSTLTNLSSLRSTFTNSCSLGLNVAVKSVQISRNKPN 62

Query: 459 VVCMS*DDPLSSVKLILQGRNLEM 388
           VVCMS D PLSSVKLILQGRNLE+
Sbjct: 63  VVCMSWDGPLSSVKLILQGRNLEV 86


>sp|P19954.2|PRSP1_SPIOL RecName: Full=Ribosome-binding factor PSRP1, chloroplastic;
           AltName: Full=30S ribosomal protein 1; AltName:
           Full=CS-S5; Short=CS5; AltName: Full=Plastid-specific
           30S ribosomal protein 1; Short=PSRP-1; AltName:
           Full=Ribosomal protein 1; AltName: Full=S22; Flags:
           Precursor gi|12316|emb|CAA41960.1| chloroplast ribosomal
           protein S22 [Spinacia oleracea] gi|18031|emb|CAA33403.1|
           spinach S22 r-protein [Spinacia oleracea]
          Length = 302

 Score = 87.4 bits (215), Expect = 5e-15
 Identities = 51/84 (60%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
 Frame = -2

Query: 636 TLCASTINIHPNLTNSLSYFINXXXXXXXXXXXXSKFTNYSSFGLNIATKTVQF-HPKLN 460
           TLC S IN++PNLTNSLS  IN            S FTN  S GLN+A K+VQ    K N
Sbjct: 3   TLCTSAINMNPNLTNSLSNSINLSSTPTNLSSLRSTFTNSCSLGLNVAVKSVQISRNKPN 62

Query: 459 VVCMS*DDPLSSVKLILQGRNLEM 388
           VVCMS D PLSSVKLILQGRNLE+
Sbjct: 63  VVCMSWDGPLSSVKLILQGRNLEV 86


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