BLASTX nr result

ID: Achyranthes23_contig00017192 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00017192
         (649 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004300276.1| putative inclusion body protein [Sweet potat...    59   9e-07

>ref|YP_004300276.1| putative inclusion body protein [Sweet potato vein clearing virus]
           gi|325698383|gb|ADZ45066.1| putative inclusion body
           protein [Sweet potato vein clearing virus]
          Length = 273

 Score = 59.3 bits (142), Expect = 9e-07
 Identities = 29/101 (28%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
 Frame = +3

Query: 3   DILDTKRIYNIRSIHEALCTSL--KRPVWVYYSRNNLLVYALSQLDKPGSRDILRQWQET 176
           D    KR+  ++++ + L  +     P+W+Y++R N L+Y+L++  KP   + +R W  T
Sbjct: 133 DFFANKRVIQLKNVVDELANNYTSNNPIWIYHNRENTLIYSLAKEVKPKDMEDIRLWIMT 192

Query: 177 IEKPDDIQKTPAIQQLCLTSSKKA-LCKLFSTATHHQCSRC 296
           +  P+    T AI++  ++   K   CK+ S    H C+RC
Sbjct: 193 LINPEKNPLTRAIKKEFISDKIKGHYCKIISEYPDHLCTRC 233


Top