BLASTX nr result
ID: Achyranthes23_contig00016881
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Achyranthes23_contig00016881
(308 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsi... 80 4e-13
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t... 79 6e-13
gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi... 79 6e-13
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi... 79 8e-13
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi... 78 1e-12
emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera] 76 5e-12
emb|CAN82105.1| hypothetical protein VITISV_002577 [Vitis vinifera] 70 3e-10
gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arab... 67 2e-09
dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t... 67 2e-09
emb|CAN83378.1| hypothetical protein VITISV_011333 [Vitis vinifera] 67 3e-09
dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis t... 66 5e-09
emb|CAN82073.1| hypothetical protein VITISV_036538 [Vitis vinifera] 66 5e-09
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th... 65 7e-09
gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidop... 65 9e-09
gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha... 64 2e-08
emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera] 63 4e-08
emb|CAN65229.1| hypothetical protein VITISV_011708 [Vitis vinifera] 63 4e-08
dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis t... 63 5e-08
emb|CAN76645.1| hypothetical protein VITISV_004685 [Vitis vinifera] 59 7e-07
emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera] 59 9e-07
>gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1156
Score = 79.7 bits (195), Expect = 4e-13
Identities = 45/95 (47%), Positives = 54/95 (56%)
Frame = -1
Query: 287 DRTSRMPIGLGEFRNGVYYLKPVVQQALSHATSADTTFLLHQRLGHPSSQNLFLLSNSRS 108
DR SR IG GE R+GVYYL V + A + L HQRLGHPS L L S
Sbjct: 52 DRFSRTLIGSGEERDGVYYLTDVATAKIHTAKVSSDQALWHQRLGHPSFSVLSSLPVLTS 111
Query: 107 NKIKEFLDNCDVCFKAKQTRSVFPDSNNNATELFA 3
+ + +CDVCF+AKQTR VFP S N + E F+
Sbjct: 112 SSLSVGSRSCDVCFRAKQTREVFPVSTNKSIECFS 146
>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1491
Score = 79.0 bits (193), Expect = 6e-13
Identities = 43/95 (45%), Positives = 52/95 (54%)
Frame = -1
Query: 287 DRTSRMPIGLGEFRNGVYYLKPVVQQALSHATSADTTFLLHQRLGHPSSQNLFLLSNSRS 108
DR SR IG GE R+GVYYL + L HQRLGHPS L L
Sbjct: 474 DRFSRTLIGTGEERDGVYYLTDAATTTVHKVDVTTDHALWHQRLGHPSFSVLSSLPLFSG 533
Query: 107 NKIKEFLDNCDVCFKAKQTRSVFPDSNNNATELFA 3
+ +CDVCF+AKQTR VFPDS+N +T+ F+
Sbjct: 534 SSCSVSSRSCDVCFRAKQTREVFPDSSNKSTDCFS 568
>gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1413
Score = 79.0 bits (193), Expect = 6e-13
Identities = 43/95 (45%), Positives = 52/95 (54%)
Frame = -1
Query: 287 DRTSRMPIGLGEFRNGVYYLKPVVQQALSHATSADTTFLLHQRLGHPSSQNLFLLSNSRS 108
DR SR IG GE R+GVYYL + L HQRLGHPS L L
Sbjct: 474 DRFSRTLIGTGEERDGVYYLTDAATTTVHKVDITTDHALWHQRLGHPSFSVLSSLPLFSG 533
Query: 107 NKIKEFLDNCDVCFKAKQTRSVFPDSNNNATELFA 3
+ +CDVCF+AKQTR VFPDS+N +T+ F+
Sbjct: 534 SSCSVSSRSCDVCFRAKQTREVFPDSSNKSTDCFS 568
>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1496
Score = 78.6 bits (192), Expect = 8e-13
Identities = 46/101 (45%), Positives = 61/101 (60%), Gaps = 3/101 (2%)
Frame = -1
Query: 296 FFPDRTSRMPIGLGEFRNGVYYLKPVVQQALSHATS--ADTTFLLHQRLGHPSSQNLFLL 123
F DR R IG GE R GVYY V+ + A+S A + L H+RLGHPS+ L L
Sbjct: 458 FLQDRFLRTLIGAGEEREGVYYFTGVLAPRVHKASSDFAISGDLWHRRLGHPSTSVLLSL 517
Query: 122 SN-SRSNKIKEFLDNCDVCFKAKQTRSVFPDSNNNATELFA 3
+RS++ + +D+CD CF++KQTR VFP SNN E F+
Sbjct: 518 PECNRSSQGFDKIDSCDTCFRSKQTREVFPISNNKTMECFS 558
>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1501
Score = 77.8 bits (190), Expect = 1e-12
Identities = 44/98 (44%), Positives = 51/98 (52%)
Frame = -1
Query: 296 FFPDRTSRMPIGLGEFRNGVYYLKPVVQQALSHATSADTTFLLHQRLGHPSSQNLFLLSN 117
F DR+S+ IG GE R GVYYL V + A L HQRLGHPS L L
Sbjct: 488 FLQDRSSKTLIGSGEERGGVYYLTDVTPAKIHTANVDSDQALWHQRLGHPSFSVLSSLPL 547
Query: 116 SRSNKIKEFLDNCDVCFKAKQTRSVFPDSNNNATELFA 3
+CDVCF+AKQTR VFP+S N E F+
Sbjct: 548 FSKTSSTVTSHSCDVCFRAKQTREVFPESINKTEECFS 585
>emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]
Length = 1316
Score = 75.9 bits (185), Expect = 5e-12
Identities = 41/95 (43%), Positives = 57/95 (60%), Gaps = 1/95 (1%)
Frame = -1
Query: 287 DRTSRMPIGLGEFRNGVYYLKPVVQQALSHATSADTTFLLHQRLGHPSSQNLFLLSNSRS 108
DRTSR PIG+G+ RNGVYY KP+ + ++ + L H+RLGHPS + L + + +
Sbjct: 350 DRTSRNPIGVGKLRNGVYYYKPLQGEKVNAVKVEEKYELWHRRLGHPSDRVLASIHSLGN 409
Query: 107 NKIKEFLDN-CDVCFKAKQTRSVFPDSNNNATELF 6
N +K D CD C + KQ R+ F SN A E+F
Sbjct: 410 NVMKGIEDYVCDSCCRGKQVRNSFQLSNKRAFEIF 444
>emb|CAN82105.1| hypothetical protein VITISV_002577 [Vitis vinifera]
Length = 1109
Score = 70.1 bits (170), Expect = 3e-10
Identities = 41/96 (42%), Positives = 56/96 (58%), Gaps = 2/96 (2%)
Frame = -1
Query: 287 DRTSRMPIGLGEFRNGVYYLKPVVQQALSHATSADTTFLLHQRLGHPSSQNLFLLSNSRS 108
DR SRM IG+GE G+Y+LK V TS + L H+R+GHPSS+ + L+ S
Sbjct: 285 DRISRMLIGVGEQCEGLYFLKGVAPIRAYKTTSIASYELWHRRMGHPSSRVVDLIXEVDS 344
Query: 107 NKIKEFLDN--CDVCFKAKQTRSVFPDSNNNATELF 6
+ N CD+CF+A+QTR +F S+N A E F
Sbjct: 345 VGRNDGXKNKFCDICFRAQQTREMFFSSDNKAKECF 380
>gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arabidopsis thaliana]
Length = 1486
Score = 67.4 bits (163), Expect = 2e-09
Identities = 38/94 (40%), Positives = 52/94 (55%)
Frame = -1
Query: 287 DRTSRMPIGLGEFRNGVYYLKPVVQQALSHATSADTTFLLHQRLGHPSSQNLFLLSNSRS 108
DRT+ M IG G NG+Y+ + V A + + ++ L HQRLGHPSS+ L LL S
Sbjct: 468 DRTTLMLIGAGRELNGLYFFRGVETAAAVTSKALPSSQLWHQRLGHPSSKALHLLPFSDV 527
Query: 107 NKIKEFLDNCDVCFKAKQTRSVFPDSNNNATELF 6
C++C +AKQTR FP S+N + F
Sbjct: 528 TSSTFDSKTCEICIQAKQTRDPFPLSSNKTSFAF 561
>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1109
Score = 67.4 bits (163), Expect = 2e-09
Identities = 37/95 (38%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Frame = -1
Query: 287 DRTSRMPIGLGEFRNGVYYLKPVVQQALSHATSADTTFLLHQRLGHPSSQNLFLLSNSRS 108
DRT+RM G+G+ NG + + + A H + L H+RLGH S + + LL
Sbjct: 253 DRTTRMVTGIGKRENGSFCFRGMENAAAVHTSVKAPFDLWHRRLGHASDKIVNLLPRELL 312
Query: 107 NKIKEFLDN-CDVCFKAKQTRSVFPDSNNNATELF 6
+ KE L+N CD C +AKQTR FP S+N + + F
Sbjct: 313 SSGKEILENVCDTCMRAKQTRDTFPLSDNRSMDSF 347
>emb|CAN83378.1| hypothetical protein VITISV_011333 [Vitis vinifera]
Length = 758
Score = 66.6 bits (161), Expect = 3e-09
Identities = 39/96 (40%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
Frame = -1
Query: 287 DRTSRMPIGLGEFRNGVYYLKPVVQQALSHATSADTTFLLHQRLGHPSSQNLFLLSNSRS 108
DR SRM IG G+ G+Y+LK V T + L H+R+GHPSS+ + L+ S
Sbjct: 214 DRNSRMLIGTGKQCEGLYFLKGVALICAYETTGIASYELWHRRMGHPSSRVVDLIYEVDS 273
Query: 107 NKIKEFLDN--CDVCFKAKQTRSVFPDSNNNATELF 6
+ + N CD+CF+A+QTR VF S+N E F
Sbjct: 274 VGGNDGVKNKFCDICFRAQQTREVFFSSDNKVKECF 309
>dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1098
Score = 65.9 bits (159), Expect = 5e-09
Identities = 38/99 (38%), Positives = 52/99 (52%), Gaps = 2/99 (2%)
Frame = -1
Query: 296 FFPDRTSRMPIGLGEFRNGVYYLKPVVQQALSHA-TSADTTFLLHQRLGHPSSQNLFLLS 120
F DR +R IG GE R GVYY V+ ++ + + L H RLGHPS+ L
Sbjct: 462 FLQDRFTRTLIGAGEEREGVYYFTGVLAARVNKGFKESSSATLWHHRLGHPSTGVLLSFP 521
Query: 119 N-SRSNKIKEFLDNCDVCFKAKQTRSVFPDSNNNATELF 6
+ S+ E + +CD+C++AKQ R VF S N T F
Sbjct: 522 EFASSSSDLEIIKSCDICYRAKQAREVFSPSLNKTTVCF 560
>emb|CAN82073.1| hypothetical protein VITISV_036538 [Vitis vinifera]
Length = 1157
Score = 65.9 bits (159), Expect = 5e-09
Identities = 41/98 (41%), Positives = 57/98 (58%), Gaps = 4/98 (4%)
Frame = -1
Query: 287 DRTSRMPIGLGEFRNGVYYLKPVVQQALSHATSADTTFLLHQRLGHPSSQNLFLL----S 120
D SRM IG GE R G+Y+LK V TS + L ++R+GHPSS+ + L+ S
Sbjct: 378 DHNSRMLIGAGEQREGLYFLKGVTPIRAYKTTSIASYELWNRRMGHPSSKIVDLIYEVDS 437
Query: 119 NSRSNKIKEFLDNCDVCFKAKQTRSVFPDSNNNATELF 6
R++ +K CD+ F+A+QTR VF S+N A E F
Sbjct: 438 VGRNDGVKNKF--CDIFFRAQQTREVFFSSDNKAKECF 473
>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
gi|7269049|emb|CAB79159.1| LTR retrotransposon like
protein [Arabidopsis thaliana]
Length = 1109
Score = 65.5 bits (158), Expect = 7e-09
Identities = 36/95 (37%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Frame = -1
Query: 287 DRTSRMPIGLGEFRNGVYYLKPVVQQALSHATSADTTFLLHQRLGHPSSQNLFLLSNSRS 108
DRT+RM G+G+ NG + + + A H + L H+RLGH S + + LL
Sbjct: 253 DRTTRMVTGIGKRENGSFCFRGMENAAAVHTSVKAPFDLWHRRLGHASDKIVNLLPRELL 312
Query: 107 NKIKEFLDN-CDVCFKAKQTRSVFPDSNNNATELF 6
+ KE L+N CD C +AKQTR FP +N + + F
Sbjct: 313 SSGKEILENVCDTCMRAKQTRDTFPLRDNRSMDSF 347
>gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidopsis thaliana]
Length = 1152
Score = 65.1 bits (157), Expect = 9e-09
Identities = 47/107 (43%), Positives = 61/107 (57%), Gaps = 12/107 (11%)
Frame = -1
Query: 287 DRTSRMPIGLGEFRNGVYYLKPVVQQALSHATSADTT------FLLHQRLGHPSSQNLFL 126
DRTS+M IG+G NGVY+L Q+A ATSA+ L H RLGHPSS+ L
Sbjct: 473 DRTSKMLIGVGTESNGVYHL----QRAEVVATSANVVKWKTNKALWHMRLGHPSSKVLSS 528
Query: 125 LS------NSRSNKIKEFLDNCDVCFKAKQTRSVFPDSNNNATELFA 3
+ +S S+ +K CDVC +AKQTR+ F +S N A E F+
Sbjct: 529 VLPSLEDFDSCSSDLKTI---CDVCVRAKQTRASFSESFNKAEECFS 572
>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
Length = 1468
Score = 64.3 bits (155), Expect = 2e-08
Identities = 36/95 (37%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Frame = -1
Query: 287 DRTSRMPIGLGEFRNGVYYLKPVVQQALSHATSADTTFLLHQRLGHPSSQNLFLLSNSRS 108
DRT+RM +G+ NG + + + A H + L H+RLGH S + + LL
Sbjct: 477 DRTTRMVTRIGKRENGSFCFRGMENAAAVHTSVKAPFDLWHRRLGHASDKIVNLLPRELL 536
Query: 107 NKIKEFLDN-CDVCFKAKQTRSVFPDSNNNATELF 6
+ KE L+N CD C +AKQTR FP S+N + + F
Sbjct: 537 SSGKEILENVCDTCMRAKQTRDTFPLSDNRSMDSF 571
>emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]
Length = 1461
Score = 63.2 bits (152), Expect = 4e-08
Identities = 38/86 (44%), Positives = 48/86 (55%)
Frame = -1
Query: 287 DRTSRMPIGLGEFRNGVYYLKPVVQQALSHATSADTTFLLHQRLGHPSSQNLFLLSNSRS 108
D T+R IGLG+ NG+YYL AL++A + L HQRLGHPSS L +L+
Sbjct: 501 DATTRKTIGLGKQHNGLYYLAQDQNPALAYAIHKHSD-LWHQRLGHPSSGPLQVLAKVNP 559
Query: 107 NKIKEFLDNCDVCFKAKQTRSVFPDS 30
+ CD+C AKQTR FP S
Sbjct: 560 KIYFDSKHVCDICPLAKQTRLSFPSS 585
>emb|CAN65229.1| hypothetical protein VITISV_011708 [Vitis vinifera]
Length = 1149
Score = 63.2 bits (152), Expect = 4e-08
Identities = 37/99 (37%), Positives = 51/99 (51%), Gaps = 5/99 (5%)
Frame = -1
Query: 287 DRTSRMPIGLGEFRNGVYYLKPVVQQALSHATSADTTFLLHQRLGHPSSQNLFLL----- 123
DR++R IG GE R G+Y+L + L H+R+G+PS + L L+
Sbjct: 398 DRSTRKVIGAGEQREGLYFLNGAASVHAFKMNGVTSFELWHRRMGYPSFKVLGLIPEVVC 457
Query: 122 SNSRSNKIKEFLDNCDVCFKAKQTRSVFPDSNNNATELF 6
+N NK+ CDVCF AKQTR +F S N A + F
Sbjct: 458 NNKNENKV------CDVCFXAKQTRKMFSSSENKAKKCF 490
>dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1462
Score = 62.8 bits (151), Expect = 5e-08
Identities = 39/95 (41%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Frame = -1
Query: 287 DRTSRMPIGLGEFRNGVYYLKPVVQQALSHATSADTTFLL-HQRLGHPSSQNLFLLSNSR 111
DR + IG G+ +NG+Y+ + + ++ T D++ L H RLGHPSS+ L LLS S
Sbjct: 433 DRITLTLIGAGKQQNGLYFFRGT--ETVASMTRMDSSSQLWHCRLGHPSSKVLKLLSFSD 490
Query: 110 SNKIKEFLDNCDVCFKAKQTRSVFPDSNNNATELF 6
S C++C KAKQTR FP SNN + F
Sbjct: 491 STGHAFDSKTCEICIKAKQTRDPFPLSNNKTSSPF 525
>emb|CAN76645.1| hypothetical protein VITISV_004685 [Vitis vinifera]
Length = 1196
Score = 58.9 bits (141), Expect = 7e-07
Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 6/97 (6%)
Frame = -1
Query: 278 SRMPIGLGEFRNGVYYLKPVVQQALSHAT---SADTTFLLHQRLGHPSSQNLFLL---SN 117
+R IG G R+G+YY ++ H + +A T L H+R+GHPS + + LL SN
Sbjct: 357 TRELIGTGVRRDGLYYFDGAEGDSVQHVSVHNAASTLELWHKRMGHPSEKVVKLLPPVSN 416
Query: 116 SRSNKIKEFLDNCDVCFKAKQTRSVFPDSNNNATELF 6
+ + K C++CF+AK R FP S+N AT +F
Sbjct: 417 LKGSLNKA----CEICFRAKHPRDKFPLSDNKATRIF 449
>emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]
Length = 1099
Score = 58.5 bits (140), Expect = 9e-07
Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 6/97 (6%)
Frame = -1
Query: 278 SRMPIGLGEFRNGVYYLKPVVQQALSHAT---SADTTFLLHQRLGHPSSQNLFLL---SN 117
+R IG G R+G+YY ++ H + +A T L H+R+GHPS + + LL SN
Sbjct: 144 TRELIGTGVRRDGLYYFGGAEGDSVQHVSVHNAASTLELWHKRMGHPSEKVVKLLPPVSN 203
Query: 116 SRSNKIKEFLDNCDVCFKAKQTRSVFPDSNNNATELF 6
+ + K C++CF+AK R FP S+N AT +F
Sbjct: 204 LKGSLNKA----CEICFRAKHPRDKFPLSDNKATRIF 236