BLASTX nr result

ID: Achyranthes23_contig00016719 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00016719
         (422 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOX90970.1| 50S ribosomal protein L7/L12, putative [Theobroma...    63   5e-08
ref|XP_002521510.1| 50S ribosomal protein L7/L12, putative [Rici...    59   7e-07
ref|XP_004149984.1| PREDICTED: 54S ribosomal protein L12, mitoch...    59   9e-07
ref|XP_002275239.1| PREDICTED: 60 ribosomal protein L12, mitocho...    55   7e-06

>gb|EOX90970.1| 50S ribosomal protein L7/L12, putative [Theobroma cacao]
          Length = 196

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 41/99 (41%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
 Frame = +1

Query: 91  MKNLRLISHHL----KTPFQNPKPQFLGFFKQSSNATSNRNYXXXXXXXXXXXXXXXXKI 258
           M+NLRL S HL    KT  QNP            N T +RNY                K+
Sbjct: 1   MRNLRLFSSHLTRIQKTLHQNPNISSSIQSLNKVNHTFSRNYTTPSQESTKQAPSG--KV 58

Query: 259 TAIADKISSLTLLEVADLTTLLGKKLEVNDLPIVSLMMP 375
            AI D++S LTLLEV DLT +L +KL+V ++PI+++MMP
Sbjct: 59  AAIVDELSGLTLLEVMDLTEVLRQKLDVKEMPIMAVMMP 97


>ref|XP_002521510.1| 50S ribosomal protein L7/L12, putative [Ricinus communis]
           gi|223539188|gb|EEF40781.1| 50S ribosomal protein
           L7/L12, putative [Ricinus communis]
          Length = 192

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 38/100 (38%), Positives = 56/100 (56%), Gaps = 5/100 (5%)
 Frame = +1

Query: 91  MKNLRLISHHL----KTPFQNPKPQFLGFFKQSSNATS-NRNYXXXXXXXXXXXXXXXXK 255
           M++ RLIS HL    KT F+NP      F  QS+   S N  Y                K
Sbjct: 1   MRHFRLISPHLSRIRKTLFRNPT-----FNPQSTIPRSPNLIYQFTSIAQEPNPPAPSDK 55

Query: 256 ITAIADKISSLTLLEVADLTTLLGKKLEVNDLPIVSLMMP 375
           + A+ D+IS LTLLE++DLT +L  KL++ ++P++++MMP
Sbjct: 56  VAALVDEISELTLLEISDLTEVLRNKLDIKEMPVMAVMMP 95


>ref|XP_004149984.1| PREDICTED: 54S ribosomal protein L12, mitochondrial-like [Cucumis
           sativus] gi|449491404|ref|XP_004158886.1| PREDICTED: 54S
           ribosomal protein L12, mitochondrial-like isoform 1
           [Cucumis sativus] gi|449491408|ref|XP_004158887.1|
           PREDICTED: 54S ribosomal protein L12, mitochondrial-like
           isoform 2 [Cucumis sativus]
          Length = 202

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 41/108 (37%), Positives = 60/108 (55%), Gaps = 13/108 (12%)
 Frame = +1

Query: 91  MKNLRLISHHL----KTPFQNPKPQ--------FLGFFKQSSNATSN-RNYXXXXXXXXX 231
           M+NLR++S H     KT  QNP           F G    +S ++ N RNY         
Sbjct: 1   MRNLRILSPHFSRIRKTFAQNPSSDSPSTRHINFPGLETFASPSSVNHRNYTTASPESRP 60

Query: 232 XXXXXXXKITAIADKISSLTLLEVADLTTLLGKKLEVNDLPIVSLMMP 375
                  +++AI D+IS LTLLEVADLT +L +KL+V ++P++++MMP
Sbjct: 61  APSE---RVSAIVDEISGLTLLEVADLTEVLREKLDVKEMPVMTMMMP 105


>ref|XP_002275239.1| PREDICTED: 60 ribosomal protein L12, mitochondrial [Vitis vinifera]
          Length = 189

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 23/41 (56%), Positives = 37/41 (90%)
 Frame = +1

Query: 253 KITAIADKISSLTLLEVADLTTLLGKKLEVNDLPIVSLMMP 375
           ++++I D+IS LTLLEV+DLT LL KKL++N++P++++MMP
Sbjct: 55  RVSSIVDEISGLTLLEVSDLTELLRKKLDINEMPVMAVMMP 95


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